MD17G1182500.v1.1

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000173
Physical Location & Seq
Forward (+)
21377003 .. 21383367
6365 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1182500.v1.1.491

Sequence Viewer

Length: 1422 bp
ATGAGAATTCAGTTTGCGAAGGAGAGTCCATGTGCTACTAATCTACCACAACTCAAAGTTAAAGATCAAGAAGAGGTGACGGAAGAGGCAGTGACAACCACATTACAAAGGGCTGTCAGTTTCTATTCAACAATCCAAGCGCATGACGGTCATTGGGCTGGGGATTATGGGGGTTCCATGTTTCTGCTTCCTGGTTTGATCATTACACTTTCAAGTAGTGGAGCTCTAAATGCTGTGTTATTGAAAGAGCATCAATGTGAGATGTGCAGATATCTCTATAATCATCAGAATGAAGATGGGGGATGGGGTCTGCATATTGAGGGGCCAAGTACCATGTTTGGCACTGCACTTAATTATGTCACTTTGAGGTTGCTTGGTGAAGGTGCTGTTGATGGACAAGGGGCAATCGAACTAGCACGCAAGTGGATATTAGACCATGGTGGCGTGACTGCAATTACTTCATGGGGGAAAATGTGGCTTTCAGTACTTGGGGCATATGAATGGTCTGGGAATAATCCACTTCTGCCTGAAGTGTGGCTATGTCCTTACTCTCTTCCATTTCATCCAGAATTGAGGAAGAGTTCTTTGAAGACTGTAATGCAGCATATACATTATGAAGATGAAAATACCCGGTACTTATGCATAGGGCCTGTTAACAAGGTGTTAAATATGCTTTGCTGTTGGGCGGAGGATCCAATCTCAGAGGCATTCAAGTTGCATCTCCTGAGAATCCCTGATTGCTTATGGATCGCTGAAGATGGCATGAATGCAGGGCTACAATGGAAGTCAAGCGTGGGATACTTCTTTTGCCATTCATCAACTGACCTTGTTGAAGAGTATGGACCAATTTTAAGAAAAGCACATCAGTATATCAAAGATTTCCAGGCTGCCTTATTACTATCGAAAATTCCAGCAGAAACAGTTGGGGACTCATTAGATATAAAGCACTTTTATGATGCTGTAAATGTTACCCTTTACTTACAGAATGACGATGGTGGTTTTGCGACTTATGAACTAACTAGATCATACCAATATGTTGAATGCACCTCAGCGGCAATTCAAGCCCTTGCATTGTTCAAAAAGTTATGTCCAGGGCATAGGAGTGAAGAAATAGAAAACTGTATTGCTAGTGCTGCAAGTTCATTGAAACGATACAAGCAACAGATGGATAATGGTTTGTATGGTTCCTGGGGAGTATGCTTCACCTATGCTGGGTGGTTTGGAATAAAGGGGTTGGTTGCTGCGGGAAGGACATACGAAGACTGCTCTAGCATTTGTAAAGCATGCAACTTTTTGTTATTCAAAGAGCTTCCTTCAGGTGTCTTCAACAAGAACTGTATGGTCAGCTATTCAGCCTACCGAAACAATTTTCCCGTTTGGGCCCTCGGAGAATATCGTTACCAGGTATTGGACGCCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00100 ko00909 ko01100 ko01110 map00100 map00909 map01100 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

474

Amino Acids

53.02

Weight (kDa)

5.63

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 36 - 189 1.2e-23 Squalene-hopene cyclase N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1408
AciI CCGC 3 cut(s) 686, 1052, 1244
AclWI GGATC 3 cut(s) 686, 699, 755
AcsI RAATTY 2 cut(s) 6, 906
AcuI CTGAAG 3 cut(s) 549, 774, 1299
AcyI GRCGYC 1 cut(s) 1413
AfaI GTAC 3 cut(s) 331, 486, 635
AfiI CCNNNNNNNGG 2 cut(s) 1212, 1408
AjnI CCWGG 5 cut(s) 190, 882, 1090, 1187, 1401
AleI CACNNNNGTG 1 cut(s) 421
AluBI AGCT 3 cut(s) 224, 1309, 1347
AluI AGCT 3 cut(s) 224, 1309, 1347
Alw21I GWGCWC 1 cut(s) 226
AlwI GGATC 3 cut(s) 686, 699, 755
AoxI GGCC 3 cut(s) 323, 647, 1380
ApaI GGGCCC 1 cut(s) 1384
ApeKI GCWGC 4 cut(s) 601, 887, 1133, 1241
ApoI RAATTY 2 cut(s) 6, 906
AspLEI GCGC 1 cut(s) 142
AspS9I GGNCC 5 cut(s) 323, 647, 842, 1380, 1381
AsuC2I CCSGG 1 cut(s) 631
AsuHPI GGTGA 3 cut(s) 88, 389, 1195
AvaII GGWCC 1 cut(s) 842
BaeGI GKGCMC 1 cut(s) 1384
BamHI GGATCC 1 cut(s) 691
BanII GRGCYC 2 cut(s) 226, 1384
BbsI GAAGAC 3 cut(s) 596, 1266, 1315
Bbv12I GWGCWC 1 cut(s) 226
BbvCI CCTCAGC 1 cut(s) 1048
BbvI GCAGC 4 cut(s) 613, 874, 1120, 1228
BccI CCATC 6 cut(s) 290, 297, 386, 752, 986, 1159
BciT130I CCWGG 5 cut(s) 192, 884, 1092, 1189, 1403
BciVI GTATCC 1 cut(s) 791
BclI TGATCA 1 cut(s) 198
BcnI CCSGG 1 cut(s) 631
BfaI CTAG 4 cut(s) 413, 1020, 1128, 1269
BfuI GTATCC 1 cut(s) 791
BisI GCNGC 5 cut(s) 602, 888, 1053, 1134, 1242
BlsI GCNGC 5 cut(s) 603, 889, 1054, 1135, 1243
BmcAI AGTACT 1 cut(s) 486
Bme1390I CCNGG 6 cut(s) 192, 631, 884, 1092, 1189, 1403
Bme18I GGWCC 1 cut(s) 842
BmgT120I GGNCC 5 cut(s) 323, 647, 842, 1380, 1381
BmiI GGNNCC 5 cut(s) 175, 324, 693, 1186, 1382
BmrFI CCNGG 6 cut(s) 192, 631, 884, 1092, 1189, 1403
BmsI GCATC 3 cut(s) 259, 727, 946
BpiI GAAGAC 3 cut(s) 596, 1266, 1315
Bpu10I CCTNAGC 1 cut(s) 1048
BpuMI CCSGG 1 cut(s) 631
BsaHI GRCGYC 1 cut(s) 1413
BsaJI CCNNGG 4 cut(s) 436, 1091, 1188, 1384
Bsc4I CCNNNNNNNGG 2 cut(s) 1212, 1408
BseBI CCWGG 5 cut(s) 192, 884, 1092, 1189, 1403
BseDI CCNNGG 4 cut(s) 436, 1091, 1188, 1384
BseGI GGATG 2 cut(s) 308, 562
BseLI CCNNNNNNNGG 2 cut(s) 1212, 1408
BseMII CTCAG 3 cut(s) 714, 716, 1062
BseSI GKGCMC 1 cut(s) 1384
BseXI GCAGC 4 cut(s) 613, 874, 1120, 1228
BseYI CCCAGC 2 cut(s) 158, 1211
BsgI GTGCAG 2 cut(s) 286, 330
BshFI GGCC 3 cut(s) 325, 649, 1382
BsiHKAI GWGCWC 1 cut(s) 226
BsiSI CCGG 1 cut(s) 631
BslFI GGGAC 1 cut(s) 941
BslI CCNNNNNNNGG 2 cut(s) 1212, 1408
BsmFI GGGAC 1 cut(s) 941
BsmI GAATGC 3 cut(s) 707, 772, 1046
BsnI GGCC 3 cut(s) 325, 649, 1382
Bsp120I GGGCCC 1 cut(s) 1380
Bsp1286I GDGCHC 2 cut(s) 226, 1384
Bsp143I GATC 5 cut(s) 64, 198, 691, 747, 1022
Bsp19I CCATGG 1 cut(s) 436
BspACI CCGC 3 cut(s) 686, 1052, 1244
BspANI GGCC 3 cut(s) 325, 649, 1382
BspCNI CTCAG 3 cut(s) 713, 717, 1061
BspLI GGNNCC 5 cut(s) 175, 324, 693, 1186, 1382
BspPI GGATC 3 cut(s) 686, 699, 755
BssECI CCNNGG 4 cut(s) 436, 1091, 1188, 1384
BssMI GATC 5 cut(s) 64, 198, 691, 747, 1022
BssNI GRCGYC 1 cut(s) 1413
BssT1I CCWWGG 1 cut(s) 436
Bst2UI CCWGG 5 cut(s) 192, 884, 1092, 1189, 1403
Bst4CI ACNGT 5 cut(s) 149, 595, 922, 1121, 1337
Bst6I CTCTTC 5 cut(s) 66, 78, 558, 572, 828
BstACI GRCGYC 1 cut(s) 1413
BstC8I GCNNGC 2 cut(s) 418, 1285
BstDEI CTNAG 3 cut(s) 700, 725, 1048
BstDSI CCRYGG 1 cut(s) 436
BstF5I GGATG 2 cut(s) 308, 562
BstHHI GCGC 1 cut(s) 142
BstKTI GATC 5 cut(s) 67, 201, 694, 750, 1025
BstMBI GATC 5 cut(s) 64, 198, 691, 747, 1022
BstMWI GCNNNNNNNGC 3 cut(s) 230, 1061, 1133
BstNI CCWGG 5 cut(s) 192, 884, 1092, 1189, 1403
BstNSI RCATGY 1 cut(s) 1287
BstSCI CCNGG 6 cut(s) 190, 629, 882, 1090, 1187, 1401
BstSLI GKGCMC 1 cut(s) 1384
BstV1I GCAGC 4 cut(s) 613, 874, 1120, 1228
BstV2I GAAGAC 3 cut(s) 596, 1266, 1315
BstX2I RGATCY 1 cut(s) 691
BstYI RGATCY 1 cut(s) 691
BsuI GTATCC 1 cut(s) 791
BsuRI GGCC 3 cut(s) 325, 649, 1382
BtgI CCRYGG 1 cut(s) 436
BtsCI GGATG 2 cut(s) 308, 562
BtsI GCAGTG 2 cut(s) 96, 342
BtsIMutI CAGTG 2 cut(s) 96, 342
Cac8I GCNNGC 2 cut(s) 418, 1285
CfoI GCGC 1 cut(s) 142
Cfr13I GGNCC 5 cut(s) 323, 647, 842, 1380, 1381
CsiI ACCWGGT 1 cut(s) 1401
Csp6I GTAC 3 cut(s) 330, 485, 634
CviAII CATG 8 cut(s) 30, 143, 178, 334, 437, 462, 763, 1284
CviQI GTAC 3 cut(s) 330, 485, 634
DdeI CTNAG 3 cut(s) 700, 725, 1048
DpnI GATC 5 cut(s) 66, 200, 693, 749, 1024
DpnII GATC 5 cut(s) 64, 198, 691, 747, 1022
Eam1104I CTCTTC 5 cut(s) 66, 78, 558, 572, 828
EarI CTCTTC 5 cut(s) 66, 78, 558, 572, 828
EciI GGCGGA 1 cut(s) 701
Ecl136II GAGCTC 1 cut(s) 224
Eco130I CCWWGG 1 cut(s) 436
Eco24I GRGCYC 2 cut(s) 226, 1384
Eco32I GATATC 1 cut(s) 272
Eco47I GGWCC 1 cut(s) 842
Eco53kI GAGCTC 1 cut(s) 224
Eco57I CTGAAG 3 cut(s) 549, 774, 1299
EcoICRI GAGCTC 1 cut(s) 224
EcoO109I RGGNCCY 2 cut(s) 647, 1381
EcoRI GAATTC 1 cut(s) 6
EcoRII CCWGG 5 cut(s) 190, 882, 1090, 1187, 1401
EcoRV GATATC 1 cut(s) 272
EcoT14I CCWWGG 1 cut(s) 436
EcoT22I ATGCAT 1 cut(s) 644
EcoT38I GRGCYC 2 cut(s) 226, 1384
ErhI CCWWGG 1 cut(s) 436
FaeI CATG 8 cut(s) 33, 146, 181, 337, 440, 465, 766, 1287
FaqI GGGAC 1 cut(s) 941
FatI CATG 8 cut(s) 29, 142, 177, 333, 436, 461, 762, 1283
FauI CCCGC 1 cut(s) 1237
FauNDI CATATG 1 cut(s) 496
FbaI TGATCA 1 cut(s) 198
Fnu4HI GCNGC 5 cut(s) 602, 888, 1053, 1134, 1242
FokI GGATG 2 cut(s) 315, 549
FriOI GRGCYC 2 cut(s) 226, 1384
Fsp4HI GCNGC 5 cut(s) 602, 888, 1053, 1134, 1242
FspBI CTAG 4 cut(s) 413, 1020, 1128, 1269
GlaI GCGC 1 cut(s) 141
GluI GCNGC 5 cut(s) 602, 888, 1053, 1134, 1242
GsaI CCCAGC 2 cut(s) 162, 1215
HaeIII GGCC 3 cut(s) 325, 649, 1382
HapII CCGG 1 cut(s) 631
HhaI GCGC 1 cut(s) 142
Hin1I GRCGYC 1 cut(s) 1413
Hin1II CATG 8 cut(s) 33, 146, 181, 337, 440, 465, 766, 1287
Hin6I GCGC 1 cut(s) 140
HinP1I GCGC 1 cut(s) 140
HincII GTYRAC 1 cut(s) 655
HindII GTYRAC 1 cut(s) 655
HinfI GANTC 3 cut(s) 25, 729, 929
HpaI GTTAAC 1 cut(s) 655
HpaII CCGG 1 cut(s) 631
HphI GGTGA 3 cut(s) 88, 389, 1195
Hpy166II GTNNAC 1 cut(s) 655
Hpy188I TCNGA 4 cut(s) 288, 703, 1388, 1421
Hpy188III TCNNGA 3 cut(s) 68, 566, 724
Hpy8I GTNNAC 1 cut(s) 655
HpyAV CCTTC 4 cut(s) 13, 374, 1242, 1323
HpyCH4III ACNGT 5 cut(s) 149, 595, 922, 1121, 1337
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 1061, 1133
HpyF3I CTNAG 3 cut(s) 700, 725, 1048
Hsp92I GRCGYC 1 cut(s) 1413
Hsp92II CATG 8 cut(s) 33, 146, 181, 337, 440, 465, 766, 1287
HspAI GCGC 1 cut(s) 140
Ksp22I TGATCA 1 cut(s) 198
KspAI GTTAAC 1 cut(s) 655
Kzo9I GATC 5 cut(s) 64, 198, 691, 747, 1022
LmnI GCTCC 1 cut(s) 221
Lsp1109I GCAGC 4 cut(s) 613, 874, 1120, 1228
LweI GCATC 3 cut(s) 259, 727, 946
MabI ACCWGGT 1 cut(s) 1401
MaeI CTAG 4 cut(s) 413, 1020, 1128, 1269
MaeIII GTNAC 6 cut(s) 76, 91, 358, 445, 967, 1397
MalI GATC 5 cut(s) 66, 200, 693, 749, 1024
MboI GATC 5 cut(s) 64, 198, 691, 747, 1022
MflI RGATCY 1 cut(s) 691
MhlI GDGCHC 2 cut(s) 226, 1384
MluCI AATT 8 cut(s) 6, 352, 453, 569, 846, 906, 1056, 1366
MlyI GAGTC 2 cut(s) 34, 923
MnlI CCTC 9 cut(s) 67, 79, 313, 360, 567, 682, 697, 1057, 1394
Mph1103I ATGCAT 1 cut(s) 644
MseI TTAA 5 cut(s) 60, 351, 654, 665, 851
MslI CAYNNNNRTG 6 cut(s) 255, 288, 421, 499, 951, 1101
MspA1I CMGCKG 1 cut(s) 1052
MspI CCGG 1 cut(s) 631
MspR9I CCNGG 6 cut(s) 192, 631, 884, 1092, 1189, 1403
Mva1269I GAATGC 3 cut(s) 707, 772, 1046
MvaI CCWGG 5 cut(s) 192, 884, 1092, 1189, 1403
MwoI GCNNNNNNNGC 3 cut(s) 230, 1061, 1133
NciI CCSGG 1 cut(s) 631
NcoI CCATGG 1 cut(s) 436
NdeI CATATG 1 cut(s) 496
NdeII GATC 5 cut(s) 64, 198, 691, 747, 1022
NlaIII CATG 8 cut(s) 33, 146, 181, 337, 440, 465, 766, 1287
NlaIV GGNNCC 5 cut(s) 175, 324, 693, 1186, 1382
NmuCI GTSAC 4 cut(s) 76, 91, 358, 445
NsiI ATGCAT 1 cut(s) 644
NspI RCATGY 1 cut(s) 1287
OliI CACNNNNGTG 1 cut(s) 421
PaeI GCATGC 1 cut(s) 1287
PctI GAATGC 3 cut(s) 707, 772, 1046
PfeI GAWTC 1 cut(s) 729
PflMI CCANNNNNTGG 1 cut(s) 1408
PkrI GCNGC 5 cut(s) 603, 889, 1054, 1135, 1243
PleI GAGTC 2 cut(s) 33, 923
PpsI GAGTC 2 cut(s) 33, 923
Psp124BI GAGCTC 1 cut(s) 226
Psp6I CCWGG 5 cut(s) 190, 882, 1090, 1187, 1401
PspFI CCCAGC 2 cut(s) 158, 1211
PspGI CCWGG 5 cut(s) 190, 882, 1090, 1187, 1401
PspN4I GGNNCC 5 cut(s) 175, 324, 693, 1186, 1382
PspOMI GGGCCC 1 cut(s) 1380
PspPI GGNCC 5 cut(s) 323, 647, 842, 1380, 1381
PsuI RGATCY 1 cut(s) 691
RsaI GTAC 3 cut(s) 331, 486, 635
RsaNI GTAC 3 cut(s) 330, 485, 634
RseI CAYNNNNRTG 6 cut(s) 255, 288, 421, 499, 951, 1101
SacI GAGCTC 1 cut(s) 226
SaqAI TTAA 5 cut(s) 60, 351, 654, 665, 851
SatI GCNGC 5 cut(s) 602, 888, 1053, 1134, 1242
Sau3AI GATC 5 cut(s) 64, 198, 691, 747, 1022
Sau96I GGNCC 5 cut(s) 323, 647, 842, 1380, 1381
ScaI AGTACT 1 cut(s) 486
SchI GAGTC 2 cut(s) 34, 923
ScrFI CCNGG 6 cut(s) 192, 631, 884, 1092, 1189, 1403
SduI GDGCHC 2 cut(s) 226, 1384
SexAI ACCWGGT 1 cut(s) 1401
SfaNI GCATC 3 cut(s) 259, 727, 946
SinI GGWCC 1 cut(s) 842
SmiMI CAYNNNNRTG 6 cut(s) 255, 288, 421, 499, 951, 1101
SphI GCATGC 1 cut(s) 1287
Sse9I AATT 8 cut(s) 6, 352, 453, 569, 846, 906, 1056, 1366
SsiI CCGC 3 cut(s) 686, 1052, 1244
SspMI CTAG 4 cut(s) 413, 1020, 1128, 1269
SstI GAGCTC 1 cut(s) 226
StyD4I CCNGG 6 cut(s) 190, 629, 882, 1090, 1187, 1401
StyI CCWWGG 1 cut(s) 436
TaaI ACNGT 5 cut(s) 149, 595, 922, 1121, 1337
TaqI TCGA 2 cut(s) 408, 902
TasI AATT 8 cut(s) 6, 352, 453, 569, 846, 906, 1056, 1366
TatI WGTACW 1 cut(s) 484
TauI GCSGC 1 cut(s) 1055
TfiI GAWTC 1 cut(s) 729
Tru1I TTAA 5 cut(s) 60, 351, 654, 665, 851
Tru9I TTAA 5 cut(s) 60, 351, 654, 665, 851
TscAI CASTG 2 cut(s) 96, 349
TseFI GTSAC 4 cut(s) 76, 91, 358, 445
TseI GCWGC 4 cut(s) 601, 887, 1133, 1241
Tsp45I GTSAC 4 cut(s) 76, 91, 358, 445
TspGWI ACGGA 1 cut(s) 95
TspRI CASTG 2 cut(s) 96, 349
Van91I CCANNNNNTGG 1 cut(s) 1408
VpaK11BI GGWCC 1 cut(s) 842
XapI RAATTY 2 cut(s) 6, 906
XceI RCATGY 1 cut(s) 1287
XspI CTAG 4 cut(s) 413, 1020, 1128, 1269
ZrmI AGTACT 1 cut(s) 486
Zsp2I ATGCAT 1 cut(s) 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.