pycom03g07120

Belongs to the terpene cyclase mutase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
5658267 .. 5665222
6956 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g07120.9

Sequence Viewer

Length: 2286 bp
ATGTGGAGGCTGAAGATTGGGGAGGGTGCAGATGACCCATATCTGTTTAGCACAAACAACTTTCTGGGGAGGCAGACATGGGAGTTTGATCCTCATGCAGGTACTCTTCAAGAGCGAGCTGAGGTTGAAGAGGCTCGCCAAAATTACCGCAAAAACCGATTTCTGGTCAAGCCTAGTAGGGACCTCCTCTGGAAAATGCAGTTTTTAAAAGAGAAAAATTTCAAACAAACGATTCCTGCAGTGAAGATCAAGGAGGGCGAGGAAATGACACGTGAAACTGCAACAGCTGCAATGAAGAGGGCTGTCCATTTCATTTCAGCCTTGCAATCAAGCCACGGACATTGGCCTGCTGAAAATTCTGGCCCATTGTTTTACCTTCTTCCTCTGGTCATGTGTCTGTATATTACTGGTCATCTTAATGTTGTATTCTCTATGGAACATCGCAAAGAAATTAAGCGTTACATATACAATCATCAGAACAAAGATGGTGGGTGGGGATTACACATAGAGAGCCCTAGCAACATGTTTTGTACGGCTTACAACTATCTGAGTTTGCGGCTGCTTGGAGAAGGACCAGATGGAGGTGAAGATAATGCCATGGCTAGCGGAAGAAAGTGGATTTTTGACCATGGGGGTGTAACCAATATACCTTCTTGGGGAAAGACTTGGCTTTCGATACTTGGTGTTTATGACTGGTCTGGATGCAACCCAGTACCTCCGGAGTATTGGATGCTTCCTTCTTTTCTACCCATACATCCAGCAAACTTGTTGTGCTTCTGTCGCGTTACGTATATGCCCCTATCATATTTGTATGGGAAAAAATTCGTCAGCCCCATATCCCCTCTCATTTTACAGTTGAGACAAGAACTCCACATTCAACCGTACCACAAAATTAAGTGGAGTGAAGCGCGCCATTTATGTGCACAGGAGGATATGCACTATCCCAACCCTTGGATACAAGATCTGGTGTGGGATTGCATGTACATGTTTACGGAGCCTCTTCTGACCCACTGGCCCTTCAACAAGTTGAGAGAGAAAGCTCTTCAAAAAAGTATCAAACACGTGCATTATGAAGACGAGAGCAGTCGGTACATGACCATTGCATGTGTAACGAAGGCATTGGTCATGCTTGCTTGTTGGGTTGAAGACCCCGAAGGCGATTCTTTTAGAAAGCATCTTGCACGGATCCCAGATTACCTGTGGGTTTCAGAAGATGGAATGAAAATACAGAGTGTGGGTAGTCAATCCTGGGATGTTGCTTTTGTCATTCAAGCTTTGCTTGCTAGCAACCTCATTGCTGAAATTGGACCAACACTTATGAAAGGACACGACTTCATAAAGAAATCCCAGGTCAGGGATAATCCTCCAGGTGACTTTAAAAAAATGTTCCGCCGCATTTCCAAGGGATCATGGACATTTGTTGATCAAGATAATGGATGGTCCGTTTCTGATTGCACTTCAGAAAATATGACGTGTTGCCTACTGTTGTCAATGATGCCATCAGAAATTGTTGGTGATAAAATAGAAGACGATCGTTTGTATGATGGTGTCAATCTCATACTCTCTATGCAGAGTAAAAATGGCGGTGTATCAGCATGGGAGCCAGCAGGATCTCCATCATGGTTGGAGTTGCTTAATCCTGTGGAATTTCTCGATGACATGGTCGTTGAGCATGAGTATATTGAGTGCACCTCCTCTGCGATACAAACTCTAGTTTTGTTTAAAAAGTTACATCCTGAGTATCGGAAGAAAGAGATAGAAGAGTTTATTGTTAGTGCCGTACAATTTATTGAAGACGCACAAAACCCCGATGGCTCATGGTATGGAAGTTGGGGAGTTTGCTTCACATATGGTACATGGTTTGCGCTTAAAGGTTTAGCTGCTGCTGGAAAAACTTATTACAACTGTCCGGCTACGCGCAACGGGGTTAATTTTCTACTGGCAACCCAAGGAGATGACGGTGGATGGGGAGAGAGTTACCTTTCATGTCAACGCAAGAAAATTATACCACTTGAAGGAAGAAGATCACACTTGGTACAAACTGCTTGGGCTTTGATGGGTTTAATTCATGCTCAGCAGGCAGAAAGAGACCCTACTCCTCTCCACCGTGCTGCAAAGCTGTTAATCAATTCTCAGATGGAGGATGGTGGATTCCCTCAACAGGAAATGACAGGTACTTTCTTTAAGGGCGGCATGTTGCACTATTCAGCATACTGCAATACTTTCCCCTTAATGGCTCTTGCAGAATACTGTATGCATGTTCCTCTGCCGTCCGAAGGCGTTTAG

Protein Analysis

762

Amino Acids

87.03

Weight (kDa)

6.18

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 89
AccB7I CCANNNNNTGG 1 cut(s) 951
AccII CGCG 3 cut(s) 783, 910, 1918
AccIII TCCGGA 1 cut(s) 718
AciI CCGC 7 cut(s) 148, 556, 606, 1390, 1393, 1584, 2190
AclWI GGATC 5 cut(s) 83, 1180, 1193, 1414, 1618
AcsI RAATTY 4 cut(s) 217, 355, 821, 1646
AcuI CTGAAG 2 cut(s) 32, 1443
AcvI CACGTG 2 cut(s) 272, 1063
AflIII ACRYGT 5 cut(s) 269, 522, 984, 1060, 1472
AjiI CACGTC 1 cut(s) 1473
AjnI CCWGG 3 cut(s) 1247, 1347, 1366
AluBI AGCT 6 cut(s) 119, 287, 1040, 1274, 1880, 2119
AluI AGCT 6 cut(s) 119, 287, 1040, 1274, 1880, 2119
Alw21I GWGCWC 2 cut(s) 925, 1691
Alw26I GTCTC 2 cut(s) 853, 2082
Alw44I GTGCAC 2 cut(s) 921, 1687
AlwI GGATC 5 cut(s) 83, 1180, 1193, 1414, 1618
Aor13HI TCCGGA 1 cut(s) 718
AoxI GGCC 3 cut(s) 344, 361, 1013
ApaLI GTGCAC 2 cut(s) 921, 1687
ApeKI GCWGC 5 cut(s) 287, 559, 1880, 1883, 2111
ApoI RAATTY 4 cut(s) 217, 355, 821, 1646
ArsI GACNNNNNNTTYG 2 cut(s) 655, 687
Asp700I GAANNNNTTC 2 cut(s) 218, 821
AspLEI GCGC 4 cut(s) 910, 912, 1867, 1920
AspS9I GGNCC 6 cut(s) 181, 362, 572, 1014, 1307, 1440
AsuHPI GGTGA 3 cut(s) 596, 1382, 1526
AsuNHI GCTAGC 2 cut(s) 602, 1283
AvaII GGWCC 4 cut(s) 181, 572, 1307, 1440
BaeGI GKGCMC 2 cut(s) 925, 1691
BamHI GGATCC 1 cut(s) 1185
BanII GRGCYC 1 cut(s) 515
BbrPI CACGTG 2 cut(s) 272, 1063
BbsI GAAGAC 4 cut(s) 1080, 1152, 1533, 1800
Bbv12I GWGCWC 2 cut(s) 925, 1691
BbvCI CCTCAGC 1 cut(s) 120
BbvI GCAGC 5 cut(s) 274, 546, 1867, 1870, 2098
BceAI ACGGC 3 cut(s) 549, 1763, 2254
BciT130I CCWGG 3 cut(s) 1249, 1349, 1368
BciVI GTATCC 1 cut(s) 948
BclI TGATCA 1 cut(s) 1423
BcoDI GTCTC 2 cut(s) 853, 2082
BfaI CTAG 5 cut(s) 174, 516, 603, 1284, 1712
BfmI CTRYAG 1 cut(s) 237
BfuAI ACCTGC 1 cut(s) 89
BfuI GTATCC 1 cut(s) 948
BglII AGATCT 1 cut(s) 961
BisI GCNGC 8 cut(s) 288, 557, 560, 1393, 1881, 1884, 2112, 2191
BlpI GCTNAGC 1 cut(s) 2073
BlsI GCNGC 8 cut(s) 289, 558, 561, 1394, 1882, 1885, 2113, 2192
Bme1390I CCNGG 3 cut(s) 1249, 1349, 1368
Bme18I GGWCC 4 cut(s) 181, 572, 1307, 1440
BmgBI CACGTC 1 cut(s) 1473
BmgT120I GGNCC 6 cut(s) 181, 362, 572, 1014, 1307, 1440
BmiI GGNNCC 4 cut(s) 182, 996, 1187, 1602
BmrFI CCNGG 3 cut(s) 1249, 1349, 1368
BmrI ACTGGG 1 cut(s) 704
BmsI GCATC 4 cut(s) 692, 720, 1183, 1485
BmtI GCTAGC 2 cut(s) 606, 1287
BmuI ACTGGG 1 cut(s) 704
BpiI GAAGAC 4 cut(s) 1080, 1152, 1533, 1800
BplI GAGNNNNNCTC 2 cut(s) 1676, 1708
BpmI CTGGAG 1 cut(s) 1350
Bpu10I CCTNAGC 1 cut(s) 120
Bpu1102I GCTNAGC 1 cut(s) 2073
BsaAI YACGTR 3 cut(s) 272, 789, 1063
BsaBI GATNNNNATC 1 cut(s) 1615
BsaI GGTCTC 1 cut(s) 2082
BsaJI CCNNGG 8 cut(s) 334, 597, 628, 950, 1248, 1347, 1401, 1948
BsaWI WCCGGW 1 cut(s) 718
BsaXI ACNNNNNCTCC 2 cut(s) 852, 882
Bse1I ACTGG 5 cut(s) 412, 698, 710, 1016, 1944
Bse3DI GCAATG 3 cut(s) 297, 1098, 1293
Bse8I GATNNNNATC 1 cut(s) 1615
BseAI TCCGGA 1 cut(s) 718
BseBI CCWGG 3 cut(s) 1249, 1349, 1368
BseDI CCNNGG 8 cut(s) 334, 597, 628, 950, 1248, 1347, 1401, 1948
BseGI GGATG 8 cut(s) 707, 735, 754, 1258, 1442, 1732, 1970, 2149
BseJI GATNNNNATC 1 cut(s) 1615
BseMI GCAATG 3 cut(s) 297, 1098, 1293
BseMII CTCAG 5 cut(s) 111, 539, 1728, 2087, 2147
BseNI ACTGG 5 cut(s) 412, 698, 710, 1016, 1944
BsePI GCGCGC 1 cut(s) 908
BseRI GAGGAG 3 cut(s) 176, 1684, 2088
BseSI GKGCMC 2 cut(s) 925, 1691
BseXI GCAGC 5 cut(s) 274, 546, 1867, 1870, 2098
BsgI GTGCAG 1 cut(s) 48
Bsh1236I CGCG 3 cut(s) 783, 910, 1918
Bsh1285I CGRYCG 1 cut(s) 1534
BshFI GGCC 3 cut(s) 346, 363, 1015
BsiEI CGRYCG 1 cut(s) 1534
BsiHKAI GWGCWC 2 cut(s) 925, 1691
BsiSI CCGG 2 cut(s) 719, 1910
BslFI GGGAC 1 cut(s) 194
BsmAI GTCTC 2 cut(s) 853, 2082
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 3 cut(s) 346, 363, 1015
Bso31I GGTCTC 1 cut(s) 2082
Bsp1286I GDGCHC 3 cut(s) 515, 925, 1691
Bsp13I TCCGGA 1 cut(s) 718
Bsp1407I TGTACA 1 cut(s) 981
Bsp143I GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
Bsp1720I GCTNAGC 1 cut(s) 2073
Bsp19I CCATGG 2 cut(s) 597, 628
BspACI CCGC 7 cut(s) 148, 556, 606, 1390, 1393, 1584, 2190
BspANI GGCC 3 cut(s) 346, 363, 1015
BspCNI CTCAG 5 cut(s) 112, 540, 1729, 2086, 2146
BspEI TCCGGA 1 cut(s) 718
BspFNI CGCG 3 cut(s) 783, 910, 1918
BspLI GGNNCC 4 cut(s) 182, 996, 1187, 1602
BspMAI CTGCAG 1 cut(s) 241
BspMI ACCTGC 1 cut(s) 89
BspOI GCTAGC 2 cut(s) 606, 1287
BspPI GGATC 5 cut(s) 83, 1180, 1193, 1414, 1618
BspQI GCTCTTC 1 cut(s) 1047
BspTNI GGTCTC 1 cut(s) 2082
BsrDI GCAATG 3 cut(s) 297, 1098, 1293
BsrGI TGTACA 1 cut(s) 981
BsrI ACTGG 5 cut(s) 412, 698, 710, 1016, 1944
BssECI CCNNGG 8 cut(s) 334, 597, 628, 950, 1248, 1347, 1401, 1948
BssHII GCGCGC 1 cut(s) 908
BssMI GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
BssT1I CCWWGG 5 cut(s) 597, 628, 950, 1401, 1948
Bst2UI CCWGG 3 cut(s) 1249, 1349, 1368
Bst4CI ACNGT 7 cut(s) 855, 882, 1485, 1907, 1961, 2108, 2252
Bst6I CTCTTC 6 cut(s) 111, 123, 290, 1005, 1047, 1755
BstAPI GCANNNNNTGC 1 cut(s) 287
BstAUI TGTACA 1 cut(s) 981
BstBAI YACGTR 3 cut(s) 272, 789, 1063
BstDEI CTNAG 5 cut(s) 120, 548, 1737, 2073, 2133
BstDSI CCRYGG 3 cut(s) 334, 597, 628
BstENI CCTNNNNNAGG 1 cut(s) 96
BstF5I GGATG 8 cut(s) 707, 735, 754, 1258, 1442, 1732, 1970, 2149
BstFNI CGCG 3 cut(s) 783, 910, 1918
BstHHI GCGC 4 cut(s) 910, 912, 1867, 1920
BstKTI GATC 9 cut(s) 91, 249, 964, 1188, 1409, 1426, 1534, 1613, 2027
BstMAI GTCTC 2 cut(s) 853, 2082
BstMBI GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
BstMCI CGRYCG 1 cut(s) 1534
BstMWI GCNNNNNNNGC 4 cut(s) 287, 780, 1280, 2078
BstNI CCWGG 3 cut(s) 1249, 1349, 1368
BstNSI RCATGY 6 cut(s) 526, 982, 988, 1107, 2197, 2261
BstSCI CCNGG 3 cut(s) 1247, 1347, 1366
BstSFI CTRYAG 1 cut(s) 237
BstSLI GKGCMC 2 cut(s) 925, 1691
BstSNI TACGTA 1 cut(s) 789
BstUI CGCG 3 cut(s) 783, 910, 1918
BstV1I GCAGC 5 cut(s) 274, 546, 1867, 1870, 2098
BstV2I GAAGAC 4 cut(s) 1080, 1152, 1533, 1800
BstX2I RGATCY 3 cut(s) 961, 1185, 1610
BstYI RGATCY 3 cut(s) 961, 1185, 1610
BsuI GTATCC 1 cut(s) 948
BsuRI GGCC 3 cut(s) 346, 363, 1015
BtgI CCRYGG 3 cut(s) 334, 597, 628
BtgZI GCGATG 1 cut(s) 425
BtrI CACGTC 1 cut(s) 1473
BtsCI GGATG 8 cut(s) 707, 735, 754, 1258, 1442, 1732, 1970, 2149
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 2 cut(s) 246, 1009
BveI ACCTGC 1 cut(s) 89
CfoI GCGC 4 cut(s) 910, 912, 1867, 1920
Cfr13I GGNCC 6 cut(s) 181, 362, 572, 1014, 1307, 1440
CseI GACGC 1 cut(s) 1805
CspCI CAANNNNNGTGG 4 cut(s) 323, 358, 469, 504
DdeI CTNAG 5 cut(s) 120, 548, 1737, 2073, 2133
DpnI GATC 9 cut(s) 90, 248, 963, 1187, 1408, 1425, 1533, 1612, 2026
DpnII GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
DraI TTTAAA 3 cut(s) 207, 1378, 1723
Eam1104I CTCTTC 6 cut(s) 111, 123, 290, 1005, 1047, 1755
EarI CTCTTC 6 cut(s) 111, 123, 290, 1005, 1047, 1755
EciI GGCGGA 1 cut(s) 1379
Eco105I TACGTA 1 cut(s) 789
Eco130I CCWWGG 5 cut(s) 597, 628, 950, 1401, 1948
Eco24I GRGCYC 1 cut(s) 515
Eco31I GGTCTC 1 cut(s) 2082
Eco47I GGWCC 4 cut(s) 181, 572, 1307, 1440
Eco57I CTGAAG 2 cut(s) 32, 1443
Eco72I CACGTG 2 cut(s) 272, 1063
EcoNI CCTNNNNNAGG 1 cut(s) 96
EcoO109I RGGNCCY 1 cut(s) 181
EcoRII CCWGG 3 cut(s) 1247, 1347, 1366
EcoT14I CCWWGG 5 cut(s) 597, 628, 950, 1401, 1948
EcoT22I ATGCAT 1 cut(s) 2259
EcoT38I GRGCYC 1 cut(s) 515
ErhI CCWWGG 5 cut(s) 597, 628, 950, 1401, 1948
FalI AAGNNNNNCTT 2 cut(s) 1263, 1295
FaqI GGGAC 1 cut(s) 194
FauNDI CATATG 1 cut(s) 1849
FbaI TGATCA 1 cut(s) 1423
Fnu4HI GCNGC 8 cut(s) 288, 557, 560, 1393, 1881, 1884, 2112, 2191
FokI GGATG 8 cut(s) 714, 741, 742, 1265, 1449, 1719, 1977, 2156
FriOI GRGCYC 1 cut(s) 515
Fsp4HI GCNGC 8 cut(s) 288, 557, 560, 1393, 1881, 1884, 2112, 2191
FspBI CTAG 5 cut(s) 174, 516, 603, 1284, 1712
GlaI GCGC 4 cut(s) 909, 911, 1866, 1919
GluI GCNGC 8 cut(s) 288, 557, 560, 1393, 1881, 1884, 2112, 2191
GsuI CTGGAG 1 cut(s) 1350
HaeIII GGCC 3 cut(s) 346, 363, 1015
HapII CCGG 2 cut(s) 719, 1910
HgaI GACGC 1 cut(s) 1805
HhaI GCGC 4 cut(s) 910, 912, 1867, 1920
Hin6I GCGC 4 cut(s) 908, 910, 1865, 1918
HinP1I GCGC 4 cut(s) 908, 910, 1865, 1918
HincII GTYRAC 1 cut(s) 1991
HindII GTYRAC 1 cut(s) 1991
HindIII AAGCTT 1 cut(s) 1272
HinfI GANTC 3 cut(s) 232, 1160, 2151
HpaII CCGG 2 cut(s) 719, 1910
HphI GGTGA 3 cut(s) 596, 1382, 1526
Hpy166II GTNNAC 4 cut(s) 923, 990, 1689, 1991
Hpy188III TCNNGA 7 cut(s) 110, 190, 699, 719, 1427, 1652, 1736
Hpy8I GTNNAC 4 cut(s) 923, 990, 1689, 1991
HpyAV CCTTC 9 cut(s) 386, 563, 660, 747, 1027, 1108, 1148, 2009, 2270
HpyCH4III ACNGT 7 cut(s) 855, 882, 1485, 1907, 1961, 2108, 2252
HpyCH4IV ACGT 4 cut(s) 271, 788, 1062, 1472
HpyF10VI GCNNNNNNNGC 4 cut(s) 287, 780, 1280, 2078
HpyF3I CTNAG 5 cut(s) 120, 548, 1737, 2073, 2133
HpySE526I ACGT 4 cut(s) 271, 788, 1062, 1472
HspAI GCGC 4 cut(s) 908, 910, 1865, 1918
Kpn2I TCCGGA 1 cut(s) 718
Ksp22I TGATCA 1 cut(s) 1423
Kzo9I GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
LguI GCTCTTC 1 cut(s) 1047
LmnI GCTCC 2 cut(s) 994, 1600
Lsp1109I GCAGC 5 cut(s) 274, 546, 1867, 1870, 2098
LweI GCATC 4 cut(s) 692, 720, 1183, 1485
MaeI CTAG 5 cut(s) 174, 516, 603, 1284, 1712
MaeII ACGT 4 cut(s) 271, 788, 1062, 1472
MaeIII GTNAC 7 cut(s) 458, 637, 784, 1108, 1370, 1728, 1976
MalI GATC 9 cut(s) 90, 248, 963, 1187, 1408, 1425, 1533, 1612, 2026
MboI GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
MflI RGATCY 3 cut(s) 961, 1185, 1610
MhlI GDGCHC 3 cut(s) 515, 925, 1691
MmeI TCCRAC 1 cut(s) 1605
Mph1103I ATGCAT 1 cut(s) 2259
MroI TCCGGA 1 cut(s) 718
MroXI GAANNNNTTC 2 cut(s) 218, 821
MslI CAYNNNNRTG 4 cut(s) 417, 633, 918, 983
MspA1I CMGCKG 1 cut(s) 287
MspI CCGG 2 cut(s) 719, 1910
MspR9I CCNGG 3 cut(s) 1249, 1349, 1368
MvaI CCWGG 3 cut(s) 1249, 1349, 1368
MvnI CGCG 3 cut(s) 783, 910, 1918
MwoI GCNNNNNNNGC 4 cut(s) 287, 780, 1280, 2078
NcoI CCATGG 2 cut(s) 597, 628
NdeI CATATG 1 cut(s) 1849
NdeII GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
NheI GCTAGC 2 cut(s) 602, 1283
NlaIV GGNNCC 4 cut(s) 182, 996, 1187, 1602
NmuCI GTSAC 1 cut(s) 1370
NsiI ATGCAT 1 cut(s) 2259
NspI RCATGY 6 cut(s) 526, 982, 988, 1107, 2197, 2261
PauI GCGCGC 1 cut(s) 908
PciI ACATGT 2 cut(s) 522, 984
PciSI GCTCTTC 1 cut(s) 1047
PdmI GAANNNNTTC 2 cut(s) 218, 821
PfeI GAWTC 3 cut(s) 232, 1160, 2151
PflFI GACNNNGTC 1 cut(s) 1661
PflMI CCANNNNNTGG 1 cut(s) 951
PkrI GCNGC 8 cut(s) 289, 558, 561, 1394, 1882, 1885, 2113, 2192
Ple19I CGATCG 1 cut(s) 1534
PmaCI CACGTG 2 cut(s) 272, 1063
PmlI CACGTG 2 cut(s) 272, 1063
Ppu21I YACGTR 3 cut(s) 272, 789, 1063
PpuMI RGGWCCY 1 cut(s) 181
PscI ACATGT 2 cut(s) 522, 984
Psp5II RGGWCCY 1 cut(s) 181
Psp6I CCWGG 3 cut(s) 1247, 1347, 1366
PspCI CACGTG 2 cut(s) 272, 1063
PspGI CCWGG 3 cut(s) 1247, 1347, 1366
PspN4I GGNNCC 4 cut(s) 182, 996, 1187, 1602
PspPI GGNCC 6 cut(s) 181, 362, 572, 1014, 1307, 1440
PspPPI RGGWCCY 1 cut(s) 181
PstI CTGCAG 1 cut(s) 241
PsuI RGATCY 3 cut(s) 961, 1185, 1610
PsyI GACNNNGTC 1 cut(s) 1661
PteI GCGCGC 1 cut(s) 908
PvuI CGATCG 1 cut(s) 1534
PvuII CAGCTG 1 cut(s) 287
RseI CAYNNNNRTG 4 cut(s) 417, 633, 918, 983
SapI GCTCTTC 1 cut(s) 1047
SatI GCNGC 8 cut(s) 288, 557, 560, 1393, 1881, 1884, 2112, 2191
Sau3AI GATC 9 cut(s) 88, 246, 961, 1185, 1406, 1423, 1531, 1610, 2024
Sau96I GGNCC 6 cut(s) 181, 362, 572, 1014, 1307, 1440
ScrFI CCNGG 3 cut(s) 1249, 1349, 1368
SduI GDGCHC 3 cut(s) 515, 925, 1691
SfaNI GCATC 4 cut(s) 692, 720, 1183, 1485
SfcI CTRYAG 1 cut(s) 237
SinI GGWCC 4 cut(s) 181, 572, 1307, 1440
SmiMI CAYNNNNRTG 4 cut(s) 417, 633, 918, 983
SnaBI TACGTA 1 cut(s) 789
SsiI CCGC 7 cut(s) 148, 556, 606, 1390, 1393, 1584, 2190
SspMI CTAG 5 cut(s) 174, 516, 603, 1284, 1712
StyD4I CCNGG 3 cut(s) 1247, 1347, 1366
StyI CCWWGG 5 cut(s) 597, 628, 950, 1401, 1948
TaaI ACNGT 7 cut(s) 855, 882, 1485, 1907, 1961, 2108, 2252
TaiI ACGT 4 cut(s) 274, 791, 1065, 1475
TaqI TCGA 2 cut(s) 674, 1653
TatI WGTACW 1 cut(s) 981
TauI GCSGC 3 cut(s) 559, 1395, 2193
TfiI GAWTC 3 cut(s) 232, 1160, 2151
TscAI CASTG 2 cut(s) 246, 1016
TseFI GTSAC 1 cut(s) 1370
TseI GCWGC 5 cut(s) 287, 559, 1880, 1883, 2111
Tsp45I GTSAC 1 cut(s) 1370
TspDTI ATGAA 8 cut(s) 301, 308, 1086, 1235, 1324, 1334, 1974, 2057
TspGWI ACGGA 4 cut(s) 351, 1007, 1198, 1432
TspRI CASTG 2 cut(s) 246, 1016
Tth111I GACNNNGTC 1 cut(s) 1661
Van91I CCANNNNNTGG 1 cut(s) 951
VneI GTGCAC 2 cut(s) 921, 1687
VpaK11BI GGWCC 4 cut(s) 181, 572, 1307, 1440
XagI CCTNNNNNAGG 1 cut(s) 96
XapI RAATTY 4 cut(s) 217, 355, 821, 1646
XceI RCATGY 6 cut(s) 526, 982, 988, 1107, 2197, 2261
XcmI CCANNNNNNNNNTGG 1 cut(s) 1197
XmnI GAANNNNTTC 2 cut(s) 218, 821
XspI CTAG 5 cut(s) 174, 516, 603, 1284, 1712
Zsp2I ATGCAT 1 cut(s) 2259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.