Prupe.3G026200_v2.0.a1

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000173
Physical Location & Seq
Reverse (-)
1924585 .. 1930665
6081 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G026200.3

Sequence Viewer

Length: 2286 bp
ATGTGGAAGCTTAAGGTTGCAGATGGAGGGAATGACCCTTACATCTACAGCACAAACGACTTTGTGGGGAGGCAGATATTTGAGTTTGATGCCGAGGCAGGAACTCCCGAAGAGCGAGCCGAGGTGGAAGAAGCTCGTCTTAATTTCTACAATAATCGCTATCAGGTCAAGCCTAGTGGTGACCTCCTATGGCGTATGCAGTTCCTAAAAGAGAAGAACTTCAAGCAGACAATTCCCCCAGTAAAGGTTGAGGATGGCGAGGAAATCACATATGAAAAGGCAACAGCCTCACTGAGAAGATCTGTTCACTTCTTTTCAGCCTTGCAGGCAAGTGATGGCCATTGGCCTGCTGAAAATGCTGGCCCGTTGTTTTTCCTTCCTCCTTTGGTCATGTGTACATACATTACAGGGCATCTTAATACTGTATTCCCAGCAGAGCATCGCAGAGAAATTCTGCGTTACATATACTATCATCAGAATCAAGATGGTGGTTGGGGATTACATATTGAAGGCCACAGCACCATGTTCGGCACAGCCCTGAGCTACATTTGTATGCGCATTCTTGGAGACGGACCTGATGGAGGCCAGGACAATGCTTGTGCCAGAGCAAGGAAATGGATTCTTGATCATGGTAGTGTCACACACATGCCCTCTTGGGGAAAGACTTGGCTTTCGATACTTGGCGTGTTTGAGTGGTCTGGAAGCAACCCAATGCCGCCGGAGTTTTGGATGCTGCCTTCATTTCTTCCTATGCACCCAGCAAAAATGTGGTGCTATTGTAGGATGGTTTACATGCCTATGTCATATTTATATGGGAAGAGGTTTATTGGCCCAATCACTCCTCTCATTCTGCAGTTGAGGGAAGAACTATATGCTCAACCTTACCATGAAATTAATTGGAAGGGAGTGCGCCATCTCTGTGCAAAAGAGGATATCTACTACCCTCACCCTTGGATACAGGACATCATGTGGGATAGTCTCTACATATGTACAGAGCCTCTTCTTAATCGCTGGCCGTTTAACAAGTTGATCAGAGAAAAAGCACTTCAAGTAACAATGAAGCATATTCATTATGAAGATGAGAACAGCAGATATATTACCATTGGATGTGTTGAAAAGGTGTTATGCATGCTTGCTTGTTGGGCTGAAGATCCAAATGGGGACTATTTTAAGAAGCATCTTGCCAGAATCCCAGATTATTTATGGGTTGCTGAAGATGGGATGAAGATGCAAAGTTTTGGCAGCCAACAATGGGATACTGGTTTTGCCATTCAAGCTTTGCTTGCTAGCAATCTCACTGACGAAATTGGACCTACGCTCGCTAGAGGACATGACTTCATCAAGAAATCTCAGGTGAAGGACAATCCATCTGGTGACTTCAAAAGCATGTACCGCCATATTTCCAAAGGATCATGGACTTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGCACTGCAGAGGGTTTAAAGTGTTGCCTGCTGTTCTCGATGATGCGACCTGAGATAATTGGTGAAAAAATGGAACCTGAGCGATTATATGATTCTGTCAACGTCCTACTTTCCCTACAGAGTAAAAATGGTGGTTTAGCAGCCTGGGAACCAGCAGGAGCTGCAGACTGGTTAGAAATGTTAAATCCCACTGAATTCTTCGAGGACATTGTGGTTGAGCATGAATATGTTGATTGCACTTCATCTGCAATTCAGGCTTTGGTTCTGTTTAAGAAGTTGTACCCTGGGCACAGGAAGAAAGAGATTGATCATTTCATTACCAATGCCACAGAGTACCTTGAAAACATACAAATGCCAGATGGTTCATGGTATGGAAGTTGGGGAGTTTGCTTCACATATGGTTCCTGGTTTGCCCTTGGAGGGTTAGCAGCTGCCGGCAAGACTTTCAATAATTGTTTAGCCATGCGCAAAGGGGTTAACTTTCTACTCAAAACACAGAGAGAGAATGGTGGTTGGGGAGAGAGCTACCTTTCATGTCCCAAAAAGGAGTACGTTCCGCTCGAAGGAAACCGATCAAATTTAGTACACACTGCATGGGCTATGATGGGTCTGATTCATGCTGGACAGGCAGACAGAGACCCTGCACGTCTTCATCGTGCAGCGAAGTTGATTATCAATTCTCAAATGGAAAATGGTGATTTTCCCCAACAGGAAATCACTGGAGTATTCCAGAAGAACTGCATGCTACATTATGCAACTTATAGAAATATCTACCCTCTCTGGGCTCTTGCAGAGTACCGCAAGCAGGTCCCGTTGCCTTCCAAACCCTAA

Protein Analysis

762

Amino Acids

87.5

Weight (kDa)

6.13

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 557, 1922
Acc36I ACCTGC 1 cut(s) 2251
AccBSI CCGCTC 1 cut(s) 2014
AciI CCGC 4 cut(s) 716, 1393, 2012, 2254
AclWI GGATC 2 cut(s) 1145, 1417
AcoI YGGCCR 2 cut(s) 337, 1013
AcsI RAATTY 3 cut(s) 450, 1649, 2032
AcuI CTGAAG 2 cut(s) 1167, 1233
AfaI GTAC 8 cut(s) 397, 991, 1391, 1736, 1790, 2006, 2040, 2252
AfiI CCNNNNNNNGG 9 cut(s) 244, 581, 609, 656, 1252, 1875, 2018, 2236, 2260
AflII CTTAAG 1 cut(s) 11
AgsI TTSAA 8 cut(s) 223, 509, 1049, 1115, 1274, 1381, 1796, 1903
AjiI CACGTC 1 cut(s) 2102
AjnI CCWGG 4 cut(s) 585, 1598, 1738, 1859
AluBI AGCT 7 cut(s) 10, 134, 543, 1277, 1616, 1886, 1980
AluI AGCT 7 cut(s) 10, 134, 543, 1277, 1616, 1886, 1980
Alw26I GTCTC 3 cut(s) 561, 983, 2085
AlwI GGATC 2 cut(s) 1145, 1417
AlwNI CAGNNNCTG 1 cut(s) 1616
AoxI GGCC 7 cut(s) 337, 344, 361, 511, 583, 829, 1013
ApeKI GCWGC 7 cut(s) 733, 1242, 1595, 1616, 1883, 1886, 2114
ApoI RAATTY 3 cut(s) 450, 1649, 2032
ArsI GACNNNNNNTTYG 2 cut(s) 655, 687
AseI ATTAAT 1 cut(s) 894
Asp700I GAANNNNTTC 1 cut(s) 218
AspLEI GCGC 3 cut(s) 558, 912, 1923
AspS9I GGNCC 5 cut(s) 362, 572, 830, 1310, 2263
AsuHPI GGTGA 6 cut(s) 191, 938, 1366, 1385, 1529, 2162
AsuNHI GCTAGC 1 cut(s) 1286
AvaII GGWCC 3 cut(s) 572, 1310, 2263
BaeGI GKGCMC 1 cut(s) 1746
BalI TGGCCA 1 cut(s) 339
BanII GRGCYC 1 cut(s) 2242
BbsI GAAGAC 1 cut(s) 2096
BbvI GCAGC 7 cut(s) 720, 1254, 1603, 1607, 1873, 1895, 2126
BceAI ACGGC 1 cut(s) 1000
BcgI CGANNNNNNTGC 2 cut(s) 508, 542
BciT130I CCWGG 4 cut(s) 587, 1600, 1740, 1861
BciVI GTATCC 2 cut(s) 948, 1249
BclI TGATCA 4 cut(s) 625, 1029, 1426, 1762
BcoDI GTCTC 3 cut(s) 561, 983, 2085
BfaI CTAG 3 cut(s) 174, 1287, 1323
BfmI CTRYAG 5 cut(s) 46, 851, 1461, 1571, 1617
BfrI CTTAAG 1 cut(s) 11
BfuAI ACCTGC 1 cut(s) 2251
BfuI GTATCC 2 cut(s) 948, 1249
BglI GCCNNNNNGGC 1 cut(s) 326
BglII AGATCT 1 cut(s) 299
BisI GCNGC 8 cut(s) 716, 734, 1243, 1596, 1617, 1884, 1887, 2115
BlsI GCNGC 8 cut(s) 717, 735, 1244, 1597, 1618, 1885, 1888, 2116
Bme1390I CCNGG 4 cut(s) 587, 1600, 1740, 1861
Bme18I GGWCC 3 cut(s) 572, 1310, 2263
BmgBI CACGTC 1 cut(s) 2102
BmgT120I GGNCC 5 cut(s) 362, 572, 830, 1310, 2263
BmiI GGNNCC 4 cut(s) 1530, 1605, 1858, 2265
BmrFI CCNGG 4 cut(s) 587, 1600, 1740, 1861
BmrI ACTGGG 1 cut(s) 233
BmsI GCATC 7 cut(s) 79, 421, 448, 720, 1186, 1218, 1488
BmtI GCTAGC 1 cut(s) 1290
BmuI ACTGGG 1 cut(s) 233
BpiI GAAGAC 1 cut(s) 2096
BpmI CTGGAG 1 cut(s) 2196
Bpu10I CCTNAGC 2 cut(s) 539, 1533
BsaI GGTCTC 1 cut(s) 2085
BsaJI CCNNGG 8 cut(s) 93, 120, 950, 1435, 1599, 1738, 1739, 1870
Bsc4I CCNNNNNNNGG 9 cut(s) 244, 581, 609, 656, 1252, 1875, 2018, 2236, 2260
Bse118I RCCGGY 1 cut(s) 1889
Bse1I ACTGG 4 cut(s) 239, 1264, 1628, 2179
BseBI CCWGG 4 cut(s) 587, 1600, 1740, 1861
BseDI CCNNGG 8 cut(s) 93, 120, 950, 1435, 1599, 1738, 1739, 1870
BseGI GGATG 6 cut(s) 259, 735, 789, 1112, 1227, 1445
BseLI CCNNNNNNNGG 9 cut(s) 244, 581, 609, 656, 1252, 1875, 2018, 2236, 2260
BseMII CTCAG 5 cut(s) 284, 530, 1364, 1497, 1524
BseNI ACTGG 4 cut(s) 239, 1264, 1628, 2179
BseRI GAGGAG 1 cut(s) 831
BseSI GKGCMC 1 cut(s) 1746
BseXI GCAGC 7 cut(s) 720, 1254, 1603, 1607, 1873, 1895, 2126
BseYI CCCAGC 2 cut(s) 430, 757
BsgI GTGCAG 2 cut(s) 2082, 2133
BshFI GGCC 7 cut(s) 339, 346, 363, 513, 585, 831, 1015
BsiSI CCGG 2 cut(s) 719, 1890
BslFI GGGAC 3 cut(s) 1175, 1977, 2249
BslI CCNNNNNNNGG 9 cut(s) 244, 581, 609, 656, 1252, 1875, 2018, 2236, 2260
BsmAI GTCTC 3 cut(s) 561, 983, 2085
BsmBI CGTCTC 1 cut(s) 561
BsmFI GGGAC 3 cut(s) 1175, 1977, 2249
BsmI GAATGC 1 cut(s) 558
BsnI GGCC 7 cut(s) 339, 346, 363, 513, 585, 831, 1015
Bso31I GGTCTC 1 cut(s) 2085
Bsp1286I GDGCHC 2 cut(s) 1746, 2242
Bsp1407I TGTACA 2 cut(s) 395, 989
Bsp143I GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
Bsp19I CCATGG 1 cut(s) 1435
BspACI CCGC 4 cut(s) 716, 1393, 2012, 2254
BspANI GGCC 7 cut(s) 339, 346, 363, 513, 585, 831, 1015
BspCNI CTCAG 5 cut(s) 285, 531, 1363, 1498, 1525
BspLI GGNNCC 4 cut(s) 1530, 1605, 1858, 2265
BspMAI CTGCAG 3 cut(s) 855, 1465, 1621
BspMI ACCTGC 1 cut(s) 2251
BspOI GCTAGC 1 cut(s) 1290
BspPI GGATC 2 cut(s) 1145, 1417
BspQI GCTCTTC 1 cut(s) 105
BspTI CTTAAG 1 cut(s) 11
BspTNI GGTCTC 1 cut(s) 2085
BsrBI CCGCTC 1 cut(s) 2014
BsrFI RCCGGY 1 cut(s) 1889
BsrGI TGTACA 2 cut(s) 395, 989
BsrI ACTGG 4 cut(s) 239, 1264, 1628, 2179
BssAI RCCGGY 1 cut(s) 1889
BssECI CCNNGG 8 cut(s) 93, 120, 950, 1435, 1599, 1738, 1739, 1870
BssMI GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
BssT1I CCWWGG 3 cut(s) 950, 1435, 1870
Bst2UI CCWGG 4 cut(s) 587, 1600, 1740, 1861
Bst4CI ACNGT 1 cut(s) 424
Bst6I CTCTTC 3 cut(s) 105, 812, 1005
BstAFI CTTAAG 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 1616
BstAUI TGTACA 2 cut(s) 395, 989
BstDEI CTNAG 5 cut(s) 293, 539, 1350, 1506, 1533
BstDSI CCRYGG 1 cut(s) 1435
BstEII GGTNACC 1 cut(s) 179
BstENI CCTNNNNNAGG 1 cut(s) 579
BstF5I GGATG 6 cut(s) 259, 735, 789, 1112, 1227, 1445
BstHHI GCGC 3 cut(s) 558, 912, 1923
BstKTI GATC 8 cut(s) 302, 628, 1032, 1153, 1412, 1429, 1765, 2030
BstMAI GTCTC 3 cut(s) 561, 983, 2085
BstMBI GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
BstMWI GCNNNNNNNGC 9 cut(s) 326, 356, 1142, 1274, 1283, 1392, 1616, 1709, 2081
BstNI CCWGG 4 cut(s) 587, 1600, 1740, 1861
BstNSI RCATGY 5 cut(s) 649, 796, 1132, 1390, 2200
BstPI GGTNACC 1 cut(s) 179
BstSCI CCNGG 4 cut(s) 585, 1598, 1738, 1859
BstSFI CTRYAG 5 cut(s) 46, 851, 1461, 1571, 1617
BstSLI GKGCMC 1 cut(s) 1746
BstV1I GCAGC 7 cut(s) 720, 1254, 1603, 1607, 1873, 1895, 2126
BstV2I GAAGAC 1 cut(s) 2096
BstX2I RGATCY 2 cut(s) 299, 1150
BstYI RGATCY 2 cut(s) 299, 1150
BsuI GTATCC 2 cut(s) 948, 1249
BsuRI GGCC 7 cut(s) 339, 346, 363, 513, 585, 831, 1015
BtgI CCRYGG 1 cut(s) 1435
BtgZI GCGATG 1 cut(s) 425
BtrI CACGTC 1 cut(s) 2102
BtsCI GGATG 6 cut(s) 259, 735, 789, 1112, 1227, 1445
BtsI GCAGTG 2 cut(s) 1458, 2043
BtsIMutI CAGTG 6 cut(s) 290, 1296, 1458, 1644, 2043, 2172
BveI ACCTGC 1 cut(s) 2251
CaiI CAGNNNCTG 1 cut(s) 1616
CfoI GCGC 3 cut(s) 558, 912, 1923
Cfr10I RCCGGY 1 cut(s) 1889
Cfr13I GGNCC 5 cut(s) 362, 572, 830, 1310, 2263
Csp6I GTAC 8 cut(s) 396, 990, 1390, 1735, 1789, 2005, 2039, 2251
CspCI CAANNNNNGTGG 2 cut(s) 157, 192
CviQI GTAC 8 cut(s) 396, 990, 1390, 1735, 1789, 2005, 2039, 2251
DdeI CTNAG 5 cut(s) 293, 539, 1350, 1506, 1533
DpnI GATC 8 cut(s) 301, 627, 1031, 1152, 1411, 1428, 1764, 2029
DpnII GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
DraI TTTAAA 1 cut(s) 1473
EaeI YGGCCR 2 cut(s) 337, 1013
Eam1104I CTCTTC 3 cut(s) 105, 812, 1005
EarI CTCTTC 3 cut(s) 105, 812, 1005
Eco130I CCWWGG 3 cut(s) 950, 1435, 1870
Eco24I GRGCYC 1 cut(s) 2242
Eco31I GGTCTC 1 cut(s) 2085
Eco32I GATATC 1 cut(s) 934
Eco47I GGWCC 3 cut(s) 572, 1310, 2263
Eco57I CTGAAG 2 cut(s) 1167, 1233
Eco91I GGTNACC 1 cut(s) 179
EcoNI CCTNNNNNAGG 1 cut(s) 579
EcoO109I RGGNCCY 1 cut(s) 2263
EcoO65I GGTNACC 1 cut(s) 179
EcoRI GAATTC 1 cut(s) 1649
EcoRII CCWGG 4 cut(s) 585, 1598, 1738, 1859
EcoRV GATATC 1 cut(s) 934
EcoT14I CCWWGG 3 cut(s) 950, 1435, 1870
EcoT22I ATGCAT 1 cut(s) 1130
EcoT38I GRGCYC 1 cut(s) 2242
ErhI CCWWGG 3 cut(s) 950, 1435, 1870
Esp3I CGTCTC 1 cut(s) 561
FalI AAGNNNNNCTT 4 cut(s) 123, 155, 1266, 1298
FaqI GGGAC 3 cut(s) 1175, 1977, 2249
FauNDI CATATG 3 cut(s) 271, 986, 1852
FbaI TGATCA 4 cut(s) 625, 1029, 1426, 1762
Fnu4HI GCNGC 8 cut(s) 716, 734, 1243, 1596, 1617, 1884, 1887, 2115
FokI GGATG 6 cut(s) 266, 742, 796, 1119, 1234, 1452
FriOI GRGCYC 1 cut(s) 2242
Fsp4HI GCNGC 8 cut(s) 716, 734, 1243, 1596, 1617, 1884, 1887, 2115
FspAI RTGCGCAY 1 cut(s) 557
FspBI CTAG 3 cut(s) 174, 1287, 1323
FspI TGCGCA 2 cut(s) 557, 1922
GlaI GCGC 3 cut(s) 557, 911, 1922
GluI GCNGC 8 cut(s) 716, 734, 1243, 1596, 1617, 1884, 1887, 2115
GsaI CCCAGC 2 cut(s) 434, 761
GsuI CTGGAG 1 cut(s) 2196
HaeIII GGCC 7 cut(s) 339, 346, 363, 513, 585, 831, 1015
HapII CCGG 2 cut(s) 719, 1890
HhaI GCGC 3 cut(s) 558, 912, 1923
Hin6I GCGC 3 cut(s) 556, 910, 1921
HinP1I GCGC 3 cut(s) 556, 910, 1921
HincII GTYRAC 2 cut(s) 1555, 1933
HindII GTYRAC 2 cut(s) 1555, 1933
HindIII AAGCTT 2 cut(s) 8, 1275
HinfI GANTC 5 cut(s) 478, 619, 1188, 1547, 2068
HpaI GTTAAC 1 cut(s) 1933
HpaII CCGG 2 cut(s) 719, 1890
HphI GGTGA 6 cut(s) 191, 938, 1366, 1385, 1529, 2162
Hpy166II GTNNAC 6 cut(s) 307, 396, 790, 1555, 1933, 2041
Hpy188I TCNGA 5 cut(s) 477, 1034, 1426, 1453, 2067
Hpy188III TCNNGA 8 cut(s) 107, 482, 623, 699, 1342, 1430, 1492, 2185
Hpy8I GTNNAC 6 cut(s) 307, 396, 790, 1555, 1933, 2041
HpyAV CCTTC 7 cut(s) 386, 503, 747, 895, 1351, 2012, 2283
HpyCH4III ACNGT 1 cut(s) 424
HpyCH4IV ACGT 3 cut(s) 1557, 2007, 2101
HpyF10VI GCNNNNNNNGC 9 cut(s) 326, 356, 1142, 1274, 1283, 1392, 1616, 1709, 2081
HpyF3I CTNAG 5 cut(s) 293, 539, 1350, 1506, 1533
HpySE526I ACGT 3 cut(s) 1557, 2007, 2101
HspAI GCGC 3 cut(s) 556, 910, 1921
KroI GCCGGC 1 cut(s) 1889
KroNI GCCGGC 1 cut(s) 1891
Ksp22I TGATCA 4 cut(s) 625, 1029, 1426, 1762
KspAI GTTAAC 1 cut(s) 1933
Kzo9I GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 1 cut(s) 1613
Lsp1109I GCAGC 7 cut(s) 720, 1254, 1603, 1607, 1873, 1895, 2126
LweI GCATC 7 cut(s) 79, 421, 448, 720, 1186, 1218, 1488
MaeI CTAG 3 cut(s) 174, 1287, 1323
MaeII ACGT 3 cut(s) 1557, 2007, 2101
MaeIII GTNAC 5 cut(s) 179, 458, 637, 1051, 1373
MalI GATC 8 cut(s) 301, 627, 1031, 1152, 1411, 1428, 1764, 2029
MbiI CCGCTC 1 cut(s) 2014
MboI GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
MflI RGATCY 2 cut(s) 299, 1150
MhlI GDGCHC 2 cut(s) 1746, 2242
MlsI TGGCCA 1 cut(s) 339
MluNI TGGCCA 1 cut(s) 339
Mox20I TGGCCA 1 cut(s) 339
Mph1103I ATGCAT 1 cut(s) 1130
MroNI GCCGGC 1 cut(s) 1889
MroXI GAANNNNTTC 1 cut(s) 218
MscI TGGCCA 1 cut(s) 339
MslI CAYNNNNRTG 7 cut(s) 551, 633, 644, 797, 918, 1680, 1805
Msp20I TGGCCA 1 cut(s) 339
MspA1I CMGCKG 1 cut(s) 1886
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 2 cut(s) 719, 1890
MspR9I CCNGG 4 cut(s) 587, 1600, 1740, 1861
Mva1269I GAATGC 1 cut(s) 558
MvaI CCWGG 4 cut(s) 587, 1600, 1740, 1861
MwoI GCNNNNNNNGC 9 cut(s) 326, 356, 1142, 1274, 1283, 1392, 1616, 1709, 2081
NaeI GCCGGC 1 cut(s) 1891
NcoI CCATGG 1 cut(s) 1435
NdeI CATATG 3 cut(s) 271, 986, 1852
NdeII GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
NgoMIV GCCGGC 1 cut(s) 1889
NheI GCTAGC 1 cut(s) 1286
NlaIV GGNNCC 4 cut(s) 1530, 1605, 1858, 2265
NmeAIII GCCGAG 2 cut(s) 118, 145
NmuCI GTSAC 3 cut(s) 179, 637, 1373
NsbI TGCGCA 2 cut(s) 557, 1922
NsiI ATGCAT 1 cut(s) 1130
NspI RCATGY 5 cut(s) 649, 796, 1132, 1390, 2200
PaeI GCATGC 2 cut(s) 1132, 2200
PasI CCCWGGG 1 cut(s) 1739
PciSI GCTCTTC 1 cut(s) 105
PcsI WCGNNNNNNNCGW 2 cut(s) 2013, 2107
PctI GAATGC 1 cut(s) 558
PdiI GCCGGC 1 cut(s) 1891
PdmI GAANNNNTTC 1 cut(s) 218
PfeI GAWTC 5 cut(s) 478, 619, 1188, 1547, 2068
PkrI GCNGC 8 cut(s) 717, 735, 1244, 1597, 1618, 1885, 1888, 2116
PpuMI RGGWCCY 1 cut(s) 2263
PshBI ATTAAT 1 cut(s) 894
Psp5II RGGWCCY 1 cut(s) 2263
Psp6I CCWGG 4 cut(s) 585, 1598, 1738, 1859
PspEI GGTNACC 1 cut(s) 179
PspFI CCCAGC 2 cut(s) 430, 757
PspGI CCWGG 4 cut(s) 585, 1598, 1738, 1859
PspN4I GGNNCC 4 cut(s) 1530, 1605, 1858, 2265
PspPI GGNCC 5 cut(s) 362, 572, 830, 1310, 2263
PspPPI RGGWCCY 1 cut(s) 2263
PstI CTGCAG 3 cut(s) 855, 1465, 1621
PstNI CAGNNNCTG 1 cut(s) 1616
PsuI RGATCY 2 cut(s) 299, 1150
PvuII CAGCTG 1 cut(s) 1886
RsaI GTAC 8 cut(s) 397, 991, 1391, 1736, 1790, 2006, 2040, 2252
RsaNI GTAC 8 cut(s) 396, 990, 1390, 1735, 1789, 2005, 2039, 2251
RseI CAYNNNNRTG 7 cut(s) 551, 633, 644, 797, 918, 1680, 1805
SapI GCTCTTC 1 cut(s) 105
SatI GCNGC 8 cut(s) 716, 734, 1243, 1596, 1617, 1884, 1887, 2115
Sau3AI GATC 8 cut(s) 299, 625, 1029, 1150, 1409, 1426, 1762, 2027
Sau96I GGNCC 5 cut(s) 362, 572, 830, 1310, 2263
ScrFI CCNGG 4 cut(s) 587, 1600, 1740, 1861
SduI GDGCHC 2 cut(s) 1746, 2242
SfaNI GCATC 7 cut(s) 79, 421, 448, 720, 1186, 1218, 1488
SfcI CTRYAG 5 cut(s) 46, 851, 1461, 1571, 1617
SinI GGWCC 3 cut(s) 572, 1310, 2263
SmiMI CAYNNNNRTG 7 cut(s) 551, 633, 644, 797, 918, 1680, 1805
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
SphI GCATGC 2 cut(s) 1132, 2200
SsiI CCGC 4 cut(s) 716, 1393, 2012, 2254
SspMI CTAG 3 cut(s) 174, 1287, 1323
StyD4I CCNGG 4 cut(s) 585, 1598, 1738, 1859
StyI CCWWGG 3 cut(s) 950, 1435, 1870
TaaI ACNGT 1 cut(s) 424
TaiI ACGT 3 cut(s) 1560, 2010, 2104
TaqI TCGA 4 cut(s) 674, 1493, 1656, 2016
TatI WGTACW 3 cut(s) 395, 989, 2038
TauI GCSGC 1 cut(s) 718
TfiI GAWTC 5 cut(s) 478, 619, 1188, 1547, 2068
TscAI CASTG 6 cut(s) 297, 1303, 1465, 1651, 2050, 2179
TseFI GTSAC 3 cut(s) 179, 637, 1373
TseI GCWGC 7 cut(s) 733, 1242, 1595, 1616, 1883, 1886, 2114
Tsp45I GTSAC 3 cut(s) 179, 637, 1373
TspGWI ACGGA 1 cut(s) 585
TspRI CASTG 6 cut(s) 297, 1303, 1465, 1651, 2050, 2179
Vha464I CTTAAG 1 cut(s) 11
VpaK11BI GGWCC 3 cut(s) 572, 1310, 2263
VspI ATTAAT 1 cut(s) 894
XagI CCTNNNNNAGG 1 cut(s) 579
XapI RAATTY 3 cut(s) 450, 1649, 2032
XceI RCATGY 5 cut(s) 649, 796, 1132, 1390, 2200
XcmI CCANNNNNNNNNTGG 3 cut(s) 765, 1200, 1818
XmnI GAANNNNTTC 1 cut(s) 218
XspI CTAG 3 cut(s) 174, 1287, 1323
Zsp2I ATGCAT 1 cut(s) 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.