Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002082.1

Orthogroup ID

OG0000173

Physical Location & Seq

Genomic Coordinates Forward (+)

220765 .. 231824

Gene Structure 11060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002082.1_g000052.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

atgtggcaagaattgacttgcgaaaattatctgaactcccatgatcgtagtcatcagggggaggtgcagacatcagggggagatgtctacatgttcgtctcgaatcgtgaaggatcaccgctgacgcaccgccatgcgccgcgccaaaacaacatcagaagctccagaagctgggaactgaagcatgtcagtcccacatcgaaaacaaggaagaggttagcctcttccacacctataaaaggtagcggaagctctgagaacaccataagtaacgcattccatgaaatgtggaagcttaaggttgcagaaggtggagaagattcctcggcttacatttacagcacgaacaacttcgtgggaaggcagacatggaagtttgatcccgatgtaggaactgctgaagagcgagctgaggttgaagcagctcgtcttcatttctacaacaaccgccatcaagttaaacccagtggtgaccttctttggagaatgcagttcctaagggagaagcagttcaaacagacaattcctccagtaaaaattgaagatggcgaggttatcacacatgaaaaaaccacagatgcactgagaaggtctgtccacttcttctcagcgctgcaggcaagcgatggccattggcctgcggaaaatgctggccctttatttttccttcctcctttggtcatagttatgcacattaccgggcatcttaacaatgtattctctgaggagcatcgcaaagaaattctgcgttacatatactatcatcagaatgaagatggtggttggggactacatatcgaaggtcatagcaccatgttcagcacagctctctgctacatttgtatgcgtattctcggagaaggacctgatgatggtggccaagacaatgcttgtccgagagcaagaaagtggattcttgatcatggtggtgtcacacacataccctcttggggaaagacttggctttcggtaaggaccgcaaaaatgtggtgctattgtaggatgacttacatgccaatgtcatacctatatggaaaaaggtttgttggccccattacacctctcattcttcaattgagggacgaactttttattcaaccttacaatgaaatcaattggaaggaagtacgccatctatgtgctgaagaggatatctactaccctcatccttggatacaggatctcctttgggatagcctctacatttccacagagcctcttcttacccgttggcccttgaacaagttgatcagagaaaaggctctacaagtgacgatgaagcatattcattacgaagacgagaacagccgatacattaccatggggtgtgtggaaaaggtgttatgtatgcttgcctgttgggttgaagatccaaatggggactatttcaagaagcatctcgctaggattccggattatttatgggttgctgaagatgggatgaagatgcaaagtattggcagtcaggagtgggatactagttttgccattcaagctttgattgctagtaatctcaaggatgaaattggaccaacacttgctagaggacatgaccttataaagaaatctcaggtcaaggacaacccttctggtgacttcaaaagcatgtaccgccacatttctaaaggatcgtggactttctctgatcaagatcatggatggcaagtttctgattgcactgcagaaggtttgaagagcaagaatggtggtttatcagcctgggagccagcagtggcagcagaatggttagaaatgttaaatccgacagagttctttgaggacattgtaattgagcatgaatatgttgagtgcacttcaactgcaatccaggctttagttctatttaagaagctacaccctgggcacaggaagaaagagattgaacattgcatcaccaatgctgtacgctacgttgaaaatatacaaatgccggatggttcatggtatggaaattggggagtttgcttcacatatggtgcctggtttgcactaggaggattggcagctgctggcaagacatttagcacttgtgcagccatgcgcaatggggttagctttctacttacggtgcagagagagaacggtggttggggagagagctatctttcatgtccacaaaagacatacattcctctcgaaggaaaccgatccaatctagtacatactgcttgggctatgatgggtctcattcatgcgggacaggcagaaagagacccaacacctcttcatcgcgcagcaaagtttataatcaattctcaattggaaaatggtgattttccccagcagaatatcgcaattgttttccgttgccttccgagggctaagcggctcccgtattatgcagctctcatccaaaataaaggatcaaacatcccagtagatgaaaatggggtcgtcttgggtaccttgaactccgccatcaagccaccttcggccggcgcacggttgggttcgatccgtcttgtagtcgacgacgtgcctctagccttagttggtctgattggtgggtgtggatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0019742 GO:0019745 GO:0031559 GO:0042300 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00909 ko01110 map00909 map01110

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

838

Amino Acids

95.05

Weight (kDa)

6.58

Isoelectric Point (pI)

44.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca	FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica	MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica	Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis	pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis	RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata	RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora	Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii	Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa	Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha	Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana	Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1559, 2246
Acc16I	TGCGCA	1 cut(s)	2042
Acc65I	GGTACC	1 cut(s)	2402
AccB1I	GGYRCC	2 cut(s)	1976, 2402
AccB7I	CCANNNNNTGG	1 cut(s)	171
AccI	GTMKAC	2 cut(s)	87, 2469
AccII	CGCG	2 cut(s)	142, 2232
AccIII	TCCGGA	1 cut(s)	1411
AclWI	GGATC	8 cut(s)	121, 374, 1188, 1364, 1636, 2142, 2371, 2449
AcoI	YGGCCR	3 cut(s)	628, 877, 2433
AcsI	RAATTY	1 cut(s)	741
AcuI	CTGAAG	4 cut(s)	200, 420, 1164, 1452
AfaI	GTAC	5 cut(s)	1128, 1610, 1905, 2160, 2404
AfeI	AGCGCT	1 cut(s)	612
AfiI	CCNNNNNNNGG	9 cut(s)	171, 239, 389, 872, 950, 2138, 2317, 2435, 2442
AflII	CTTAAG	1 cut(s)	296
AflIII	ACRYGT	1 cut(s)	90
AhlI	ACTAGT	1 cut(s)	1478
AjiI	CACGTC	1 cut(s)	2476
AjnI	CCWGG	4 cut(s)	1718, 1827, 1858, 1979
AloI	GAACNNNNNNTCC	2 cut(s)	494, 526
Alw21I	GWGCWC	1 cut(s)	1814
Alw26I	GTCTC	3 cut(s)	103, 2189, 2205
Alw44I	GTGCAC	1 cut(s)	1810
AlwI	GGATC	8 cut(s)	121, 374, 1188, 1364, 1636, 2142, 2371, 2449
AlwNI	CAGNNNCTG	2 cut(s)	171, 2009
Aor13HI	TCCGGA	1 cut(s)	1411
Aor51HI	AGCGCT	1 cut(s)	612
AoxI	GGCC	7 cut(s)	628, 635, 652, 877, 1048, 1232, 2433
ApaLI	GTGCAC	1 cut(s)	1810
ApeKI	GCWGC	8 cut(s)	422, 613, 1736, 2003, 2006, 2033, 2234, 2342
ApoI	RAATTY	1 cut(s)	741
ArsI	GACNNNNNNTTYG	2 cut(s)	949, 981
Asp700I	GAANNNNTTC	2 cut(s)	350, 509
Asp718I	GGTACC	1 cut(s)	2402
AspLEI	GCGC	6 cut(s)	139, 144, 613, 2043, 2234, 2441
AspS9I	GGNCC	6 cut(s)	653, 863, 975, 1049, 1233, 1529
AsuC2I	CCSGG	1 cut(s)	700
AsuHPI	GGTGA	5 cut(s)	108, 482, 1604, 1885, 2282
AvaII	GGWCC	3 cut(s)	863, 975, 1529
AxyI	CCTNAGG	1 cut(s)	497
BaeGI	GKGCMC	2 cut(s)	1814, 1866
BalI	TGGCCA	2 cut(s)	630, 879
BanI	GGYRCC	2 cut(s)	1976, 2402
BbsI	GAAGAC	2 cut(s)	422, 1302
Bbv12I	GWGCWC	1 cut(s)	1814
BbvCI	CCTCAGC	1 cut(s)	411
BbvI	GCAGC	8 cut(s)	434, 600, 1748, 1993, 2015, 2045, 2246, 2354
BciT130I	CCWGG	4 cut(s)	1720, 1829, 1860, 1981
BciVI	GTATCC	2 cut(s)	1167, 1468
BclI	TGATCA	3 cut(s)	919, 1248, 1645
BcnI	CCSGG	1 cut(s)	700
BcoDI	GTCTC	3 cut(s)	103, 2189, 2205
BcuI	ACTAGT	1 cut(s)	1478
BfaI	CTAG	7 cut(s)	1404, 1479, 1506, 1542, 1991, 2156, 2483
BfmI	CTRYAG	2 cut(s)	614, 1680
BfoI	RGCGCY	1 cut(s)	614
BfrI	CTTAAG	1 cut(s)	296
BfuI	GTATCC	2 cut(s)	1167, 1468
BlpI	GCTNAGC	1 cut(s)	2322
Bme1390I	CCNGG	5 cut(s)	700, 1720, 1829, 1860, 1981
Bme18I	GGWCC	3 cut(s)	863, 975, 1529
BmgBI	CACGTC	1 cut(s)	2476
BmgT120I	GGNCC	6 cut(s)	653, 863, 975, 1049, 1233, 1529
BmiI	GGNNCC	5 cut(s)	1051, 1725, 1978, 2330, 2404
BmrFI	CCNGG	5 cut(s)	700, 1720, 1829, 1860, 1981
BmrI	ACTGGG	2 cut(s)	459, 2369
BmsI	GCATC	6 cut(s)	568, 712, 739, 1405, 1437, 1899
BmuI	ACTGGG	2 cut(s)	459, 2369
BpiI	GAAGAC	2 cut(s)	422, 1302
BpmI	CTGGAG	2 cut(s)	148, 513
Bpu10I	CCTNAGC	1 cut(s)	411
Bpu1102I	GCTNAGC	1 cut(s)	2322
BpuEI	CTTGAG	1 cut(s)	1499
BpuMI	CCSGG	1 cut(s)	700
BsaBI	GATNNNNATC	1 cut(s)	1650
BsaI	GGTCTC	2 cut(s)	2189, 2205
BsaJI	CCNNGG	7 cut(s)	324, 1169, 1320, 1719, 1858, 1859, 2315
BsaWI	WCCGGW	1 cut(s)	1411
BsaXI	ACNNNNNCTCC	6 cut(s)	494, 511, 524, 541, 1167, 1197
Bsc4I	CCNNNNNNNGG	9 cut(s)	171, 239, 389, 872, 950, 2138, 2317, 2435, 2442
Bse118I	RCCGGY	1 cut(s)	2435
Bse1I	ACTGG	3 cut(s)	465, 530, 2375
Bse21I	CCTNAGG	1 cut(s)	497
Bse3DI	GCAATG	2 cut(s)	1885, 2050
Bse8I	GATNNNNATC	1 cut(s)	1650
BseAI	TCCGGA	1 cut(s)	1411
BseBI	CCWGG	4 cut(s)	1720, 1829, 1860, 1981
BseDI	CCNNGG	7 cut(s)	324, 1169, 1320, 1719, 1858, 1859, 2315
BseGI	GGATG	8 cut(s)	1008, 1165, 1446, 1525, 1664, 1939, 2349, 2370
BseJI	GATNNNNATC	1 cut(s)	1650
BseLI	CCNNNNNNNGG	9 cut(s)	171, 239, 389, 872, 950, 2138, 2317, 2435, 2442
BseMI	GCAATG	2 cut(s)	1885, 2050
BseMII	CTCAG	6 cut(s)	246, 402, 575, 621, 714, 1583
BseNI	ACTGG	3 cut(s)	465, 530, 2375
BseRI	GAGGAG	1 cut(s)	740
BseSI	GKGCMC	2 cut(s)	1814, 1866
BseX3I	CGGCCG	1 cut(s)	2433
BseXI	GCAGC	8 cut(s)	434, 600, 1748, 1993, 2015, 2045, 2246, 2354
BseYI	CCCAGC	2 cut(s)	171, 2280
BsgI	GTGCAG	3 cut(s)	86, 2052, 2090
Bsh1236I	CGCG	2 cut(s)	142, 2232
Bsh1285I	CGRYCG	1 cut(s)	2436
BshFI	GGCC	7 cut(s)	630, 637, 654, 879, 1050, 1234, 2435
BshNI	GGYRCC	2 cut(s)	1976, 2402
BsiEI	CGRYCG	1 cut(s)	2436
BsiHKAI	GWGCWC	1 cut(s)	1814
BsiSI	CCGG	4 cut(s)	699, 1412, 1931, 2436
BslFI	GGGAC	5 cut(s)	177, 801, 1094, 1394, 2211
BslI	CCNNNNNNNGG	9 cut(s)	171, 239, 389, 872, 950, 2138, 2317, 2435, 2442
BsmAI	GTCTC	3 cut(s)	103, 2189, 2205
BsmBI	CGTCTC	1 cut(s)	103
BsmFI	GGGAC	5 cut(s)	177, 801, 1094, 1394, 2211
BsmI	GAATGC	2 cut(s)	275, 492
BsnI	GGCC	7 cut(s)	630, 637, 654, 879, 1050, 1234, 2435
Bso31I	GGTCTC	2 cut(s)	2189, 2205
Bsp1286I	GDGCHC	2 cut(s)	1814, 1866
Bsp13I	TCCGGA	1 cut(s)	1411
Bsp1720I	GCTNAGC	1 cut(s)	2322
Bsp19I	CCATGG	1 cut(s)	1320
BspANI	GGCC	7 cut(s)	630, 637, 654, 879, 1050, 1234, 2435
BspCNI	CTCAG	6 cut(s)	247, 403, 576, 620, 715, 1582
BspEI	TCCGGA	1 cut(s)	1411
BspFNI	CGCG	2 cut(s)	142, 2232
BspLI	GGNNCC	5 cut(s)	1051, 1725, 1978, 2330, 2404
BspMAI	CTGCAG	2 cut(s)	618, 1684
BspPI	GGATC	8 cut(s)	121, 374, 1188, 1364, 1636, 2142, 2371, 2449
BspQI	GCTCTTC	2 cut(s)	396, 1688
BspT107I	GGYRCC	2 cut(s)	1976, 2402
BspTI	CTTAAG	1 cut(s)	296
BspTNI	GGTCTC	2 cut(s)	2189, 2205
BsrDI	GCAATG	2 cut(s)	1885, 2050
BsrFI	RCCGGY	1 cut(s)	2435
BsrI	ACTGG	3 cut(s)	465, 530, 2375
BssAI	RCCGGY	1 cut(s)	2435
BssECI	CCNNGG	7 cut(s)	324, 1169, 1320, 1719, 1858, 1859, 2315
BssT1I	CCWWGG	2 cut(s)	1169, 1320
Bst2UI	CCWGG	4 cut(s)	1720, 1829, 1860, 1981
Bst4CI	ACNGT	3 cut(s)	2068, 2084, 2445
Bst6I	CTCTTC	7 cut(s)	206, 229, 396, 1140, 1224, 1688, 2229
BstAFI	CTTAAG	1 cut(s)	296
BstC8I	GCNNGC	9 cut(s)	408, 618, 622, 639, 652, 1353, 1728, 2011, 2437
BstDEI	CTNAG	9 cut(s)	255, 411, 497, 584, 607, 723, 1569, 2322, 2488
BstDSI	CCRYGG	1 cut(s)	1320
BstEII	GGTNACC	1 cut(s)	470
BstENI	CCTNNNNNAGG	2 cut(s)	237, 2136
BstF5I	GGATG	8 cut(s)	1008, 1165, 1446, 1525, 1664, 1939, 2349, 2370
BstFNI	CGCG	2 cut(s)	142, 2232
BstH2I	RGCGCY	1 cut(s)	614
BstHHI	GCGC	6 cut(s)	139, 144, 613, 2043, 2234, 2441
BstMAI	GTCTC	3 cut(s)	103, 2189, 2205
BstMCI	CGRYCG	1 cut(s)	2436
BstNI	CCWGG	4 cut(s)	1720, 1829, 1860, 1981
BstNSI	RCATGY	4 cut(s)	94, 188, 1015, 1609
BstPI	GGTNACC	1 cut(s)	470
BstSCI	CCNGG	5 cut(s)	698, 1718, 1827, 1858, 1979
BstSFI	CTRYAG	2 cut(s)	614, 1680
BstSLI	GKGCMC	2 cut(s)	1814, 1866
BstUI	CGCG	2 cut(s)	142, 2232
BstV1I	GCAGC	8 cut(s)	434, 600, 1748, 1993, 2015, 2045, 2246, 2354
BstV2I	GAAGAC	2 cut(s)	422, 1302
BstX2I	RGATCY	2 cut(s)	1180, 1369
BstYI	RGATCY	2 cut(s)	1180, 1369
BstZI	CGGCCG	1 cut(s)	2433
Bsu36I	CCTNAGG	1 cut(s)	497
BsuI	GTATCC	2 cut(s)	1167, 1468
BsuRI	GGCC	7 cut(s)	630, 637, 654, 879, 1050, 1234, 2435
BtgI	CCRYGG	1 cut(s)	1320
BtgZI	GCGATG	3 cut(s)	639, 716, 2213
BtrI	CACGTC	1 cut(s)	2476
BtsCI	GGATG	8 cut(s)	1008, 1165, 1446, 1525, 1664, 1939, 2349, 2370
BtsI	GCAGTG	2 cut(s)	1677, 1737
BtsIMutI	CAGTG	4 cut(s)	472, 581, 1677, 1737
Cac8I	GCNNGC	9 cut(s)	408, 618, 622, 639, 652, 1353, 1728, 2011, 2437
CaiI	CAGNNNCTG	2 cut(s)	171, 2009
CfoI	GCGC	6 cut(s)	139, 144, 613, 2043, 2234, 2441
Cfr10I	RCCGGY	1 cut(s)	2435
Cfr13I	GGNCC	6 cut(s)	653, 863, 975, 1049, 1233, 1529
CseI	GACGC	1 cut(s)	133
Csp6I	GTAC	5 cut(s)	1127, 1609, 1904, 2159, 2403
CspCI	CAANNNNNGTGG	2 cut(s)	1687, 1722
CviQI	GTAC	5 cut(s)	1127, 1609, 1904, 2159, 2403
DdeI	CTNAG	9 cut(s)	255, 411, 497, 584, 607, 723, 1569, 2322, 2488
EaeI	YGGCCR	3 cut(s)	628, 877, 2433
EagI	CGGCCG	1 cut(s)	2433
Eam1104I	CTCTTC	7 cut(s)	206, 229, 396, 1140, 1224, 1688, 2229
EarI	CTCTTC	7 cut(s)	206, 229, 396, 1140, 1224, 1688, 2229
EciI	GGCGGA	1 cut(s)	2404
EclXI	CGGCCG	1 cut(s)	2433
Eco130I	CCWWGG	2 cut(s)	1169, 1320
Eco31I	GGTCTC	2 cut(s)	2189, 2205
Eco32I	GATATC	1 cut(s)	1153
Eco47I	GGWCC	3 cut(s)	863, 975, 1529
Eco47III	AGCGCT	1 cut(s)	612
Eco52I	CGGCCG	1 cut(s)	2433
Eco57I	CTGAAG	4 cut(s)	200, 420, 1164, 1452
Eco81I	CCTNAGG	1 cut(s)	497
Eco91I	GGTNACC	1 cut(s)	470
EcoNI	CCTNNNNNAGG	2 cut(s)	237, 2136
EcoO109I	RGGNCCY	1 cut(s)	863
EcoO65I	GGTNACC	1 cut(s)	470
EcoRII	CCWGG	4 cut(s)	1718, 1827, 1858, 1979
EcoRV	GATATC	1 cut(s)	1153
EcoT14I	CCWWGG	2 cut(s)	1169, 1320
ErhI	CCWWGG	2 cut(s)	1169, 1320
Esp3I	CGTCTC	1 cut(s)	103
FaqI	GGGAC	5 cut(s)	177, 801, 1094, 1394, 2211
FauI	CCCGC	1 cut(s)	2188
FauNDI	CATATG	1 cut(s)	1972
FbaI	TGATCA	3 cut(s)	919, 1248, 1645
FblI	GTMKAC	2 cut(s)	87, 2469
FokI	GGATG	8 cut(s)	1015, 1152, 1453, 1532, 1671, 1946, 2336, 2357
FspBI	CTAG	7 cut(s)	1404, 1479, 1506, 1542, 1991, 2156, 2483
FspI	TGCGCA	1 cut(s)	2042
GlaI	GCGC	6 cut(s)	138, 143, 612, 2042, 2233, 2440
GsaI	CCCAGC	2 cut(s)	175, 2284
GsuI	CTGGAG	2 cut(s)	148, 513
HaeII	RGCGCY	1 cut(s)	614
HaeIII	GGCC	7 cut(s)	630, 637, 654, 879, 1050, 1234, 2435
HapII	CCGG	4 cut(s)	699, 1412, 1931, 2436
HgaI	GACGC	1 cut(s)	133
HhaI	GCGC	6 cut(s)	139, 144, 613, 2043, 2234, 2441
Hin6I	GCGC	6 cut(s)	137, 142, 611, 2041, 2232, 2439
HinP1I	GCGC	6 cut(s)	137, 142, 611, 2041, 2232, 2439
HincII	GTYRAC	1 cut(s)	2470
HindII	GTYRAC	1 cut(s)	2470
HindIII	AAGCTT	2 cut(s)	293, 1494
HinfI	GANTC	4 cut(s)	103, 320, 913, 1408
HpaII	CCGG	4 cut(s)	699, 1412, 1931, 2436
HphI	GGTGA	5 cut(s)	108, 482, 1604, 1885, 2282
Hpy166II	GTNNAC	6 cut(s)	88, 598, 1635, 1812, 2114, 2470
Hpy8I	GTNNAC	6 cut(s)	88, 598, 1635, 1812, 2114, 2470
Hpy99I	CGWCG	2 cut(s)	2474, 2477
HpyCH4III	ACNGT	3 cut(s)	2068, 2084, 2445
HpyCH4IV	ACGT	2 cut(s)	1911, 2475
HpyF3I	CTNAG	9 cut(s)	255, 411, 497, 584, 607, 723, 1569, 2322, 2488
HpySE526I	ACGT	2 cut(s)	1911, 2475
HspAI	GCGC	6 cut(s)	137, 142, 611, 2041, 2232, 2439
Kpn2I	TCCGGA	1 cut(s)	1411
KpnI	GGTACC	1 cut(s)	2406
KroI	GCCGGC	1 cut(s)	2435
KroNI	GCCGGC	1 cut(s)	2437
Ksp22I	TGATCA	3 cut(s)	919, 1248, 1645
LguI	GCTCTTC	2 cut(s)	396, 1688
LmnI	GCTCC	4 cut(s)	167, 727, 1723, 2334
Lsp1109I	GCAGC	8 cut(s)	434, 600, 1748, 1993, 2015, 2045, 2246, 2354
LweI	GCATC	6 cut(s)	568, 712, 739, 1405, 1437, 1899
MaeI	CTAG	7 cut(s)	1404, 1479, 1506, 1542, 1991, 2156, 2483
MaeII	ACGT	2 cut(s)	1911, 2475
MaeIII	GTNAC	6 cut(s)	269, 470, 749, 931, 1270, 1592
MfeI	CAATTG	4 cut(s)	1073, 1114, 2258, 2295
MflI	RGATCY	2 cut(s)	1180, 1369
MhlI	GDGCHC	2 cut(s)	1814, 1866
MlsI	TGGCCA	2 cut(s)	630, 879
MluNI	TGGCCA	2 cut(s)	630, 879
MmeI	TCCRAC	1 cut(s)	1787
Mox20I	TGGCCA	2 cut(s)	630, 879
MroI	TCCGGA	1 cut(s)	1411
MroNI	GCCGGC	1 cut(s)	2435
MroXI	GAANNNNTTC	2 cut(s)	350, 509
MscI	TGGCCA	2 cut(s)	630, 879
MseI	TTAA	5 cut(s)	297, 459, 708, 1757, 1845
MslI	CAYNNNNRTG	9 cut(s)	132, 686, 768, 842, 927, 1016, 1137, 1319, 1800
Msp20I	TGGCCA	2 cut(s)	630, 879
MspA1I	CMGCKG	2 cut(s)	121, 2006
MspCI	CTTAAG	1 cut(s)	296
MspI	CCGG	4 cut(s)	699, 1412, 1931, 2436
MspR9I	CCNGG	5 cut(s)	700, 1720, 1829, 1860, 1981
MteI	GCGCNGCGC	1 cut(s)	140
MunI	CAATTG	4 cut(s)	1073, 1114, 2258, 2295
Mva1269I	GAATGC	2 cut(s)	275, 492
MvaI	CCWGG	4 cut(s)	1720, 1829, 1860, 1981
MvnI	CGCG	2 cut(s)	142, 2232
NaeI	GCCGGC	1 cut(s)	2437
NciI	CCSGG	1 cut(s)	700
NcoI	CCATGG	1 cut(s)	1320
NdeI	CATATG	1 cut(s)	1972
NgoMIV	GCCGGC	1 cut(s)	2435
NlaIV	GGNNCC	5 cut(s)	1051, 1725, 1978, 2330, 2404
NmeAIII	GCCGAG	1 cut(s)	305
NmuCI	GTSAC	4 cut(s)	470, 931, 1270, 1592
NsbI	TGCGCA	1 cut(s)	2042
NspI	RCATGY	4 cut(s)	94, 188, 1015, 1609
PasI	CCCWGGG	1 cut(s)	1859
PciI	ACATGT	1 cut(s)	90
PciSI	GCTCTTC	2 cut(s)	396, 1688
PctI	GAATGC	2 cut(s)	275, 492
PdiI	GCCGGC	1 cut(s)	2437
PdmI	GAANNNNTTC	2 cut(s)	350, 509
PfeI	GAWTC	4 cut(s)	103, 320, 913, 1408
PflMI	CCANNNNNTGG	1 cut(s)	171
PpuMI	RGGWCCY	1 cut(s)	863
PscI	ACATGT	1 cut(s)	90
PsiI	TTATAA	2 cut(s)	1559, 2246
Psp5II	RGGWCCY	1 cut(s)	863
Psp6I	CCWGG	4 cut(s)	1718, 1827, 1858, 1979
PspEI	GGTNACC	1 cut(s)	470
PspFI	CCCAGC	2 cut(s)	171, 2280
PspGI	CCWGG	4 cut(s)	1718, 1827, 1858, 1979
PspN4I	GGNNCC	5 cut(s)	1051, 1725, 1978, 2330, 2404
PspPI	GGNCC	6 cut(s)	653, 863, 975, 1049, 1233, 1529
PspPPI	RGGWCCY	1 cut(s)	863
PsrI	GAACNNNNNNTAC	2 cut(s)	1295, 1327
PstI	CTGCAG	2 cut(s)	618, 1684
PstNI	CAGNNNCTG	2 cut(s)	171, 2009
PsuI	RGATCY	2 cut(s)	1180, 1369
PvuII	CAGCTG	1 cut(s)	2006
RsaI	GTAC	5 cut(s)	1128, 1610, 1905, 2160, 2404
RsaNI	GTAC	5 cut(s)	1127, 1609, 1904, 2159, 2403
RseI	CAYNNNNRTG	9 cut(s)	132, 686, 768, 842, 927, 1016, 1137, 1319, 1800
SalI	GTCGAC	1 cut(s)	2468
SapI	GCTCTTC	2 cut(s)	396, 1688
SaqAI	TTAA	5 cut(s)	297, 459, 708, 1757, 1845
Sau96I	GGNCC	6 cut(s)	653, 863, 975, 1049, 1233, 1529
ScrFI	CCNGG	5 cut(s)	700, 1720, 1829, 1860, 1981
SduI	GDGCHC	2 cut(s)	1814, 1866
SfaNI	GCATC	6 cut(s)	568, 712, 739, 1405, 1437, 1899
SfcI	CTRYAG	2 cut(s)	614, 1680
SinI	GGWCC	3 cut(s)	863, 975, 1529
SmiMI	CAYNNNNRTG	9 cut(s)	132, 686, 768, 842, 927, 1016, 1137, 1319, 1800
SmlI	CTYRAG	2 cut(s)	296, 1514
SmoI	CTYRAG	2 cut(s)	296, 1514
SpeI	ACTAGT	1 cut(s)	1478
SspMI	CTAG	7 cut(s)	1404, 1479, 1506, 1542, 1991, 2156, 2483
StyD4I	CCNGG	5 cut(s)	698, 1718, 1827, 1858, 1979
StyI	CCWWGG	2 cut(s)	1169, 1320
TaaI	ACNGT	3 cut(s)	2068, 2084, 2445
TaiI	ACGT	2 cut(s)	1914, 2478
TaqI	TCGA	6 cut(s)	101, 200, 798, 2136, 2453, 2469
TatI	WGTACW	1 cut(s)	2158
TauI	GCSGC	2 cut(s)	142, 2329
TfiI	GAWTC	4 cut(s)	103, 320, 913, 1408
Tru1I	TTAA	5 cut(s)	297, 459, 708, 1757, 1845
Tru9I	TTAA	5 cut(s)	297, 459, 708, 1757, 1845
TscAI	CASTG	4 cut(s)	472, 588, 1684, 1737
TseFI	GTSAC	4 cut(s)	470, 931, 1270, 1592
TseI	GCWGC	8 cut(s)	422, 613, 1736, 2003, 2006, 2033, 2234, 2342
Tsp45I	GTSAC	4 cut(s)	470, 931, 1270, 1592
TspGWI	ACGGA	2 cut(s)	2294, 2447
TspRI	CASTG	4 cut(s)	472, 588, 1684, 1737
Van91I	CCANNNNNTGG	1 cut(s)	171
Vha464I	CTTAAG	1 cut(s)	296
VneI	GTGCAC	1 cut(s)	1810
VpaK11BI	GGWCC	3 cut(s)	863, 975, 1529
XagI	CCTNNNNNAGG	2 cut(s)	237, 2136
XapI	RAATTY	1 cut(s)	741
XceI	RCATGY	4 cut(s)	94, 188, 1015, 1609
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1327
XmiI	GTMKAC	2 cut(s)	87, 2469
XmnI	GAANNNNTTC	2 cut(s)	350, 509
XspI	CTAG	7 cut(s)	1404, 1479, 1506, 1542, 1991, 2156, 2483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.