RchiOBHm_Chr5g0049791

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000173
Physical Location & Seq
Reverse (-)
47693212 .. 47695686
2475 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32742

Sequence Viewer

Length: 1545 bp
ATGTGCGTTGCAGCAAAGATGTTGTGCTACTGTAGGTTAACTTACCTACCCATGTCCTACTTTTATGCAAAAAAATTTGTTGGCCCAATCACTCCTCTGGTTGAACAATTGAGACAAGAAATTTACTGTGAACCTTACAGTGAAATTAAGTGGAGTAAAGTGCGACATCATTGTGCAAAGGAAGATAACTACTATCCTCATGGAAGGGTACAACGTTTTATGTGGGACACTCTTTACCATGTTTGTGAGCCTATTCTTGCTTGGTGGCCCTTTAAGAAGATCAGAGACAATGCTATTCAATTTACCATTGACCAAATCCATTATGAAGATGAGAACAGTCGATACATTACCATTGGATGTATCGAAAAGCCATTAATGATGCTTGCCTGTTGGGTTGAGGATCCTAGCGGAGAAGCTTTTAAGAAGCATCTTCCTAGACTTGATGATTATATTTGGGTCGGTGAAGATGGAATCAAGATTCAGAGTTTTGGTAGCCAGACTTGGGATTGTTCTCTTACAATCCAAGCTTTGCTTGCTGGGAATCTCCATAATGAATTTGGACCAGTACTTAAGAAAGCACACGACTTCCTAAAGATATCCCAGGTGAGGATCAATCCTTGTGGTGACTACCTAGCTCATTTCCGTCACATTTCCAAAGGATGCTGGACTTTCTCTGATCGGGATCATGGATGGCAAGTTTCAGATTGCACTGCAGAAGCATTGAGGTGCTGCTGTCTGTTTGCAATGATGTCACCAGAGGTTGTTGGCGAGCCAATGGAAGCCGAGTGTATGTATGATGCTGTCAATGTCATAATGTCACTACAGAGTCCAAATGGTGGTGTATCAGCGTGGGAGCCGACTGGAGCTCCTAAATGGTTGGAGTGGCTCAACCCTGTTGAATTTTTTGAGGACCTTGTCATTGAATATGATTACGTCGAGTGCACTTCATCTTCGATTCAGGCCTTACTTTTGTTTAGGAAGTTGTATCCTAATCACAGAAGGAAAGAGATCAACAACTTCATCACAAGGGCTGCAGACTACATTGAAAGCATACAATACGCTGATGGCTCATGGTATGGAAACTGGGGTATCTGCTTTCTCTATGGAACATGGTTTGCAATCAAAGGGTTAGAGGCAGCAGGAAGAACCTACCACAATTGCGAGGCAGTTCGCAAAGGTGTTGACTTTTTGCTAAAAACACAAAGGGAAGATGGTGGTTGGGGAGAGCACTACACCTCATGCACGAACAAGAAATACACAGCTCAAGACAGTACAAATCTGGTGCAAACTGCCCTCGGATTAATGGGTCTAATTCACGGTCGACAGGGTGAGAGAGATCCAACTCCTATTCACCGTGCTGCAAGGGTCTTGATGAACGGTCAGTTGGATGATGGTGATTTTCCCCAACAGGAACTGGTGGGAGTTTTCATGAGGAATGCAATGTTACACTTTGGAGGATATAGGAATGTTTTCCCATTGTGGGCTCTTGGAGAGTATCGTACGTACTCTGGAGCAGTTGCTTTACCAAAAGGATTTGAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

514

Amino Acids

59.2

Weight (kDa)

5.96

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_C PF13243 165 - 500 8.5e-48 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 836
AccI GTMKAC 1 cut(s) 1321
AciI CCGC 1 cut(s) 408
AclI AACGTT 1 cut(s) 214
AclWI GGATC 5 cut(s) 395, 408, 617, 690, 1331
AcsI RAATTY 4 cut(s) 74, 120, 554, 899
AfaI GTAC 5 cut(s) 210, 567, 1273, 1501, 1505
AfiI CCNNNNNNNGG 4 cut(s) 502, 606, 836, 1480
AflII CTTAAG 1 cut(s) 569
AgsI TTSAA 6 cut(s) 104, 299, 899, 923, 1046, 1538
AjnI CCWGG 1 cut(s) 600
AjuI GAANNNNNNNTTGG 2 cut(s) 1367, 1399
AluBI AGCT 5 cut(s) 416, 527, 635, 866, 1262
AluI AGCT 5 cut(s) 416, 527, 635, 866, 1262
Alw21I GWGCWC 3 cut(s) 868, 944, 1230
Alw26I GTCTC 2 cut(s) 106, 279
Alw44I GTGCAC 1 cut(s) 940
AlwI GGATC 5 cut(s) 395, 408, 617, 690, 1331
AlwNI CAGNNNCTG 1 cut(s) 1414
AoxI GGCC 3 cut(s) 82, 266, 960
ApaLI GTGCAC 1 cut(s) 940
ApeKI GCWGC 5 cut(s) 11, 729, 1031, 1136, 1358
ApoI RAATTY 4 cut(s) 74, 120, 554, 899
AseI ATTAAT 2 cut(s) 374, 1301
Asp700I GAANNNNTTC 1 cut(s) 1469
AspS9I GGNCC 4 cut(s) 83, 267, 560, 910
AsuHPI GGTGA 7 cut(s) 473, 616, 635, 744, 1340, 1343, 1406
AvaII GGWCC 2 cut(s) 560, 910
BaeGI GKGCMC 1 cut(s) 944
BaeI ACNNNNGTAYC 2 cut(s) 1072, 1105
BamHI GGATCC 1 cut(s) 400
BanII GRGCYC 2 cut(s) 868, 1486
Bbv12I GWGCWC 3 cut(s) 868, 944, 1230
BbvI GCAGC 5 cut(s) 23, 716, 1018, 1148, 1345
BccI CCATC 5 cut(s) 461, 684, 1058, 1205, 1385
BciT130I CCWGG 1 cut(s) 602
BciVI GTATCC 1 cut(s) 996
BcoDI GTCTC 2 cut(s) 106, 279
BfaI CTAG 3 cut(s) 405, 435, 632
BfmI CTRYAG 4 cut(s) 31, 711, 821, 1032
BfrI CTTAAG 1 cut(s) 569
BfuI GTATCC 1 cut(s) 996
BisI GCNGC 5 cut(s) 12, 730, 1032, 1137, 1359
BlsI GCNGC 5 cut(s) 13, 731, 1033, 1138, 1360
BmcAI AGTACT 1 cut(s) 567
Bme1390I CCNGG 1 cut(s) 602
Bme18I GGWCC 2 cut(s) 560, 910
BmgT120I GGNCC 4 cut(s) 83, 267, 560, 910
BmiI GGNNCC 2 cut(s) 402, 855
BmrFI CCNGG 1 cut(s) 602
BmrI ACTGGG 1 cut(s) 1093
BmsI GCATC 4 cut(s) 369, 436, 650, 787
BmuI ACTGGG 1 cut(s) 1093
BpmI CTGGAG 2 cut(s) 882, 1530
BpuEI CTTGAG 1 cut(s) 1248
BsaAI YACGTR 1 cut(s) 1503
BsaBI GATNNNNATC 1 cut(s) 681
BsaJI CCNNGG 2 cut(s) 600, 1294
BsaXI ACNNNNNCTCC 2 cut(s) 850, 880
Bsc4I CCNNNNNNNGG 4 cut(s) 502, 606, 836, 1480
Bse1I ACTGG 4 cut(s) 563, 865, 1088, 1419
Bse3DI GCAATG 2 cut(s) 750, 1446
Bse8I GATNNNNATC 1 cut(s) 681
BseBI CCWGG 1 cut(s) 602
BseDI CCNNGG 2 cut(s) 600, 1294
BseGI GGATG 4 cut(s) 362, 665, 695, 1393
BseJI GATNNNNATC 1 cut(s) 681
BseLI CCNNNNNNNGG 4 cut(s) 502, 606, 836, 1480
BseMI GCAATG 2 cut(s) 750, 1446
BseNI ACTGG 4 cut(s) 563, 865, 1088, 1419
BseRI GAGGAG 1 cut(s) 84
BseSI GKGCMC 1 cut(s) 944
BseXI GCAGC 5 cut(s) 23, 716, 1018, 1148, 1345
BseYI CCCAGC 1 cut(s) 536
Bsh1285I CGRYCG 1 cut(s) 1321
BshFI GGCC 3 cut(s) 84, 268, 962
BsiEI CGRYCG 1 cut(s) 1321
BsiHKAI GWGCWC 3 cut(s) 868, 944, 1230
BsiWI CGTACG 1 cut(s) 1499
BslFI GGGAC 1 cut(s) 239
BslI CCNNNNNNNGG 4 cut(s) 502, 606, 836, 1480
BsmAI GTCTC 2 cut(s) 106, 279
BsmFI GGGAC 1 cut(s) 239
BsmI GAATGC 1 cut(s) 1441
BsnI GGCC 3 cut(s) 84, 268, 962
Bsp1286I GDGCHC 4 cut(s) 868, 944, 1230, 1486
Bsp143I GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
BspACI CCGC 1 cut(s) 408
BspANI GGCC 3 cut(s) 84, 268, 962
BspHI TCATGA 1 cut(s) 1428
BspLI GGNNCC 2 cut(s) 402, 855
BspMAI CTGCAG 2 cut(s) 715, 1036
BspPI GGATC 5 cut(s) 395, 408, 617, 690, 1331
BspTI CTTAAG 1 cut(s) 569
BsrDI GCAATG 2 cut(s) 750, 1446
BsrI ACTGG 4 cut(s) 563, 865, 1088, 1419
BssECI CCNNGG 2 cut(s) 600, 1294
BssMI GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
Bst2UI CCWGG 1 cut(s) 602
Bst4CI ACNGT 8 cut(s) 32, 128, 140, 338, 1271, 1319, 1355, 1379
BstAFI CTTAAG 1 cut(s) 569
BstBAI YACGTR 1 cut(s) 1503
BstC8I GCNNGC 3 cut(s) 384, 534, 770
BstF5I GGATG 4 cut(s) 362, 665, 695, 1393
BstKTI GATC 7 cut(s) 282, 403, 612, 679, 685, 1011, 1339
BstMAI GTCTC 2 cut(s) 106, 279
BstMBI GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
BstMCI CGRYCG 1 cut(s) 1321
BstMWI GCNNNNNNNGC 1 cut(s) 533
BstNI CCWGG 1 cut(s) 602
BstSCI CCNGG 1 cut(s) 600
BstSFI CTRYAG 4 cut(s) 31, 711, 821, 1032
BstSLI GKGCMC 1 cut(s) 944
BstSNI TACGTA 1 cut(s) 1503
BstV1I GCAGC 5 cut(s) 23, 716, 1018, 1148, 1345
BstX2I RGATCY 2 cut(s) 400, 1336
BstYI RGATCY 2 cut(s) 400, 1336
BsuI GTATCC 1 cut(s) 996
BsuRI GGCC 3 cut(s) 84, 268, 962
BtsCI GGATG 4 cut(s) 362, 665, 695, 1393
BtsI GCAGTG 1 cut(s) 708
BtsIMutI CAGTG 2 cut(s) 145, 708
Cac8I GCNNGC 3 cut(s) 384, 534, 770
CaiI CAGNNNCTG 1 cut(s) 1414
CciI TCATGA 1 cut(s) 1428
Cfr13I GGNCC 4 cut(s) 83, 267, 560, 910
Csp6I GTAC 5 cut(s) 209, 566, 1272, 1500, 1504
CspCI CAANNNNNGTGG 2 cut(s) 601, 636
CviAII CATG 8 cut(s) 52, 200, 239, 686, 1071, 1110, 1239, 1429
CviQI GTAC 5 cut(s) 209, 566, 1272, 1500, 1504
DpnI GATC 7 cut(s) 281, 402, 611, 678, 684, 1010, 1338
DpnII GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
Ecl136II GAGCTC 1 cut(s) 866
Eco105I TACGTA 1 cut(s) 1503
Eco147I AGGCCT 1 cut(s) 962
Eco24I GRGCYC 2 cut(s) 868, 1486
Eco32I GATATC 1 cut(s) 597
Eco47I GGWCC 2 cut(s) 560, 910
Eco53kI GAGCTC 1 cut(s) 866
EcoICRI GAGCTC 1 cut(s) 866
EcoO109I RGGNCCY 1 cut(s) 910
EcoRII CCWGG 1 cut(s) 600
EcoRV GATATC 1 cut(s) 597
EcoT38I GRGCYC 2 cut(s) 868, 1486
FaeI CATG 8 cut(s) 55, 203, 242, 689, 1074, 1113, 1242, 1432
FalI AAGNNNNNCTT 2 cut(s) 516, 548
FaqI GGGAC 1 cut(s) 239
FatI CATG 8 cut(s) 51, 199, 238, 685, 1070, 1109, 1238, 1428
FblI GTMKAC 1 cut(s) 1321
Fnu4HI GCNGC 5 cut(s) 12, 730, 1032, 1137, 1359
FokI GGATG 4 cut(s) 369, 672, 702, 1400
FriOI GRGCYC 2 cut(s) 868, 1486
Fsp4HI GCNGC 5 cut(s) 12, 730, 1032, 1137, 1359
FspBI CTAG 3 cut(s) 405, 435, 632
GluI GCNGC 5 cut(s) 12, 730, 1032, 1137, 1359
GsaI CCCAGC 1 cut(s) 540
GsuI CTGGAG 2 cut(s) 882, 1530
HaeIII GGCC 3 cut(s) 84, 268, 962
Hin1II CATG 8 cut(s) 55, 203, 242, 689, 1074, 1113, 1242, 1432
HincII GTYRAC 3 cut(s) 39, 1183, 1322
HindII GTYRAC 3 cut(s) 39, 1183, 1322
HindIII AAGCTT 2 cut(s) 414, 525
HinfI GANTC 5 cut(s) 471, 478, 541, 826, 955
HpaI GTTAAC 1 cut(s) 39
HphI GGTGA 7 cut(s) 473, 616, 635, 744, 1340, 1343, 1406
Hpy166II GTNNAC 5 cut(s) 39, 131, 942, 1183, 1322
Hpy188I TCNGA 5 cut(s) 284, 483, 676, 703, 1298
Hpy188III TCNNGA 6 cut(s) 475, 680, 1265, 1369, 1429, 1509
Hpy8I GTNNAC 5 cut(s) 39, 131, 942, 1183, 1322
Hpy99I CGWCG 1 cut(s) 938
HpyAV CCTTC 2 cut(s) 198, 993
HpyCH4III ACNGT 8 cut(s) 32, 128, 140, 338, 1271, 1319, 1355, 1379
HpyCH4IV ACGT 3 cut(s) 214, 933, 1502
HpyF10VI GCNNNNNNNGC 1 cut(s) 533
HpySE526I ACGT 3 cut(s) 214, 933, 1502
Hsp92II CATG 8 cut(s) 55, 203, 242, 689, 1074, 1113, 1242, 1432
KspAI GTTAAC 1 cut(s) 39
Kzo9I GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
LmnI GCTCC 4 cut(s) 853, 863, 871, 1511
Lsp1109I GCAGC 5 cut(s) 23, 716, 1018, 1148, 1345
LweI GCATC 4 cut(s) 369, 436, 650, 787
MaeI CTAG 3 cut(s) 405, 435, 632
MaeII ACGT 3 cut(s) 214, 933, 1502
MaeIII GTNAC 5 cut(s) 623, 644, 750, 816, 1443
MalI GATC 7 cut(s) 281, 402, 611, 678, 684, 1010, 1338
MboI GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
MboII GAAGA 8 cut(s) 194, 289, 338, 422, 476, 942, 1155, 1220
MfeI CAATTG 2 cut(s) 107, 1156
MflI RGATCY 2 cut(s) 400, 1336
MhlI GDGCHC 4 cut(s) 868, 944, 1230, 1486
MluCI AATT 9 cut(s) 74, 107, 120, 144, 299, 554, 899, 1156, 1311
MlyI GAGTC 1 cut(s) 835
MmeI TCCRAC 3 cut(s) 858, 1364, 1365
MroXI GAANNNNTTC 1 cut(s) 1469
MseI TTAA 7 cut(s) 38, 147, 273, 374, 420, 570, 1301
MslI CAYNNNNRTG 3 cut(s) 171, 243, 724
MspCI CTTAAG 1 cut(s) 569
MspR9I CCNGG 1 cut(s) 602
MunI CAATTG 2 cut(s) 107, 1156
Mva1269I GAATGC 1 cut(s) 1441
MvaI CCWGG 1 cut(s) 602
MwoI GCNNNNNNNGC 1 cut(s) 533
NdeII GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
NlaIII CATG 8 cut(s) 55, 203, 242, 689, 1074, 1113, 1242, 1432
NlaIV GGNNCC 2 cut(s) 402, 855
NmeAIII GCCGAG 1 cut(s) 808
NmuCI GTSAC 4 cut(s) 623, 644, 750, 816
PagI TCATGA 1 cut(s) 1428
PceI AGGCCT 1 cut(s) 962
PctI GAATGC 1 cut(s) 1441
PdmI GAANNNNTTC 1 cut(s) 1469
PfeI GAWTC 4 cut(s) 471, 478, 541, 955
Pfl23II CGTACG 1 cut(s) 1499
PflFI GACNNNGTC 1 cut(s) 914
PflMI CCANNNNNTGG 1 cut(s) 836
PkrI GCNGC 5 cut(s) 13, 731, 1033, 1138, 1360
PleI GAGTC 1 cut(s) 834
PpsI GAGTC 1 cut(s) 834
Ppu21I YACGTR 1 cut(s) 1503
PpuMI RGGWCCY 1 cut(s) 910
PshBI ATTAAT 2 cut(s) 374, 1301
Psp124BI GAGCTC 1 cut(s) 868
Psp1406I AACGTT 1 cut(s) 214
Psp5II RGGWCCY 1 cut(s) 910
Psp6I CCWGG 1 cut(s) 600
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 1 cut(s) 600
PspLI CGTACG 1 cut(s) 1499
PspN4I GGNNCC 2 cut(s) 402, 855
PspPI GGNCC 4 cut(s) 83, 267, 560, 910
PspPPI RGGWCCY 1 cut(s) 910
PsrI GAACNNNNNNTAC 4 cut(s) 326, 358, 1238, 1270
PstI CTGCAG 2 cut(s) 715, 1036
PstNI CAGNNNCTG 1 cut(s) 1414
PsuI RGATCY 2 cut(s) 400, 1336
PsyI GACNNNGTC 1 cut(s) 914
RsaI GTAC 5 cut(s) 210, 567, 1273, 1501, 1505
RsaNI GTAC 5 cut(s) 209, 566, 1272, 1500, 1504
RseI CAYNNNNRTG 3 cut(s) 171, 243, 724
SacI GAGCTC 1 cut(s) 868
SalI GTCGAC 1 cut(s) 1320
SaqAI TTAA 7 cut(s) 38, 147, 273, 374, 420, 570, 1301
SatI GCNGC 5 cut(s) 12, 730, 1032, 1137, 1359
Sau3AI GATC 7 cut(s) 279, 400, 609, 676, 682, 1008, 1336
Sau96I GGNCC 4 cut(s) 83, 267, 560, 910
ScaI AGTACT 1 cut(s) 567
SchI GAGTC 1 cut(s) 835
ScrFI CCNGG 1 cut(s) 602
SduI GDGCHC 4 cut(s) 868, 944, 1230, 1486
SfaNI GCATC 4 cut(s) 369, 436, 650, 787
SfcI CTRYAG 4 cut(s) 31, 711, 821, 1032
SinI GGWCC 2 cut(s) 560, 910
SmiMI CAYNNNNRTG 3 cut(s) 171, 243, 724
SmlI CTYRAG 2 cut(s) 569, 1263
SmoI CTYRAG 2 cut(s) 569, 1263
SnaBI TACGTA 1 cut(s) 1503
Sse9I AATT 9 cut(s) 74, 107, 120, 144, 299, 554, 899, 1156, 1311
SseBI AGGCCT 1 cut(s) 962
SsiI CCGC 1 cut(s) 408
SspMI CTAG 3 cut(s) 405, 435, 632
SstI GAGCTC 1 cut(s) 868
StuI AGGCCT 1 cut(s) 962
StyD4I CCNGG 1 cut(s) 600
TaaI ACNGT 8 cut(s) 32, 128, 140, 338, 1271, 1319, 1355, 1379
TaiI ACGT 3 cut(s) 217, 936, 1505
TaqI TCGA 5 cut(s) 340, 363, 936, 953, 1321
TasI AATT 9 cut(s) 74, 107, 120, 144, 299, 554, 899, 1156, 1311
TatI WGTACW 2 cut(s) 565, 1271
TfiI GAWTC 4 cut(s) 471, 478, 541, 955
Tru1I TTAA 7 cut(s) 38, 147, 273, 374, 420, 570, 1301
Tru9I TTAA 7 cut(s) 38, 147, 273, 374, 420, 570, 1301
TscAI CASTG 2 cut(s) 145, 715
TseFI GTSAC 4 cut(s) 623, 644, 750, 816
TseI GCWGC 5 cut(s) 11, 729, 1031, 1136, 1358
Tsp45I GTSAC 4 cut(s) 623, 644, 750, 816
TspDTI ATGAA 6 cut(s) 339, 567, 936, 1009, 1388, 1417
TspGWI ACGGA 1 cut(s) 632
TspRI CASTG 2 cut(s) 145, 715
Tth111I GACNNNGTC 1 cut(s) 914
Van91I CCANNNNNTGG 1 cut(s) 836
Vha464I CTTAAG 1 cut(s) 569
VneI GTGCAC 1 cut(s) 940
VpaK11BI GGWCC 2 cut(s) 560, 910
VspI ATTAAT 2 cut(s) 374, 1301
XapI RAATTY 4 cut(s) 74, 120, 554, 899
XcmI CCANNNNNNNNNTGG 1 cut(s) 554
XmiI GTMKAC 1 cut(s) 1321
XmnI GAANNNNTTC 1 cut(s) 1469
XspI CTAG 3 cut(s) 405, 435, 632
ZrmI AGTACT 1 cut(s) 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.