Rorug02G0407200

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000173
Physical Location & Seq
Forward (+)
51948547 .. 51950801
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0407200.1

Sequence Viewer

Length: 2022 bp
ATGATTCCAGCTCTATTTGAAGCAATTGCAAGAAATGACACACGGACTTTCAAGGACTTGGTCCGATACAATGGAGGATCTCTCTTGCAGAAAACTGAGGAAACAGGAAACTCAGTGTTACACCTTGCTGCAAGGTTCGGGCATGTTGAGCTGGTTGCCTATATCATTAAGCTGCTTCCTGACTTGGTTTCTGTTAGGAACGTTAAGGGAGAAACTCCATTACACGAAGCTTGTCGCCAAGGGAATACCAGTGTTGTGAAGCTGCTGTTAGAGGCCAATCCATTCGTGACTTGTAGTCCTAACCATGAGCAAACTGCTTTCTTCATAGCTTGCAGTTATGGGAATGTTGAGGTTGTCAAGTACATGGCAAACCAACCAGGGGTCTTAGACTTTGAACAACATGAAGCTTTCAGTCCTCTTCATTTTTCTATAGCAGAAGGCTATGTCGATATTGTTAAGACTATTTTGGAAGCATGTCCCCGGTTTGCTTGGAAGGTTGACAACAATGGGTATTTGCCGCTGCATTTGGCTTGTGAGAAAGGTCAGTTAGAGATAACAAAAACACTCTTGATGATCGATCCAAACCTTTCTCTTGAACTCAATCGCTACCGTTACACTCCACCACACTTGGCTGCAATGAATGGTCAAATCCAAATCCTTGAGGAACTTCTTTTGTGCTCTCCCAGATCCTTAGAACTTCGCACAGGAGACGGAGAAACTGTGTTTCATCTTTCTGTAAGATTCAACAGATATGATGTGTTTACGTCTTTGACAAAAAATTATAACCACACCAACCTGCTCAACCAGGCTGACAAGCAGGGTAACACAGTCCTACATCTTGCTGTCTCTGCAGGGAACACTAGATTATCAGAGTACATCATCCGCAATACTGCAGTAGATGTTAATTGTAGGAACCAAAGAGGTCAAACAGCATTGGAAATCCTAGACGAGCAAAGAATATCGTCTGATCTTAGACATACGTTGAAGAGTTTTGGTGGCAGAACAAGTACTAAGCTATTCTCTTTAACCCCAAAGGTTGATGAGATTGATTCTGGGACTACAACAACATTAGAAAGTCCTAGAGCTGCACTGGAGCAAGAATTTGAAAGGCTTTTTGAATGTAACACGCGTCCAGGAAGTGATCAATCTGATTGTGAAATTGGCATGGGGCGTATGGCTCGGAACAATCAACAAATGGAAAACTTCGCTACAGTACAAGCAAAGATGAATCCCAGTCATGATGTTTTAATGAATTCTGATTTTCTTTTTAGCTCAGAATCATATAGAACAAGTATGAGCTCCCCAGTCTTGAATCCACAGCTGCTTCAAAAGCCAAGAGGGAAAGTGGATAAAACTAGGCAATATGAGATATATAGAGAGGCATTGCAAAATACTAGGAACACTATCACAATAGTTGCTGTTTTGATTGCCTCAGTTACTTTTACTGCTGGCATAAACCCACCTGGTGGTGTCTACCAGGAGGGATGGCTTAAAGGACAGTCAACAGTTGGCAGAACAACAGCTTTTAAGGTCTTCACAATAAGCAACACAGCGGCATTGTTCATATCTATGTGCATTGTCATTGTGTTGGTGAGCATCATTCCCTTCCGGCGAAAATCACTGATGAAACTACTTGTGGTTGCTCACAAAGTCTTGTGGGTGGCAGTGTCACTCATGGCCACAGCTTACATTGCAGCCTCATGGATAATCATACCACATGGACGTGGTGAAGGAGAAAATTGGACCCTTGAAGTTCTGATATCTGTATGTGCAGGGACCATGGGATCTGTTTTTTTCTTTCTTGGTGTCACATGGACTAGACACTTATTGATGAAAATGAAATGGAGGAAACAGATACGTAAGACTTCAGAGAAGAGAGCACAAAGACAAGCAGCAAGAGCACAGAAACGAGCACATAAAAGGGCACAGAGAAGAACAGAGGAAACACCAGAATACAGTTCATCAGTATCCACGAACTCCCATGCTGAGAGTTTCGAAGAACTAGGATATCATACATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

673

Amino Acids

75.71

Weight (kDa)

8.93

Isoelectric Point (pI)

31.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 93 2.5e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 40 - 90 4.5e-09 Ankyrin repeats (many copies)
Ank PF00023 70 - 96 1.6e-06 Ankyrin repeat
Ank_4 PF13637 74 - 122 2.5e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 102 - 157 1.9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 138 - 195 4.6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 174 - 261 1.3e-09 Ankyrin repeats (3 copies)
Ank_5 PF13857 265 - 314 2.8e-06 Ankyrin repeats (many copies)
PGG PF13962 460 - 569 2.5e-30 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc36I ACCTGC 1 cut(s) 804
AccB7I CCANNNNNTGG 1 cut(s) 1466
AccI GTMKAC 1 cut(s) 1473
AccII CGCG 1 cut(s) 1129
AciI CCGC 3 cut(s) 518, 883, 1553
AclI AACGTT 1 cut(s) 201
AclWI GGATC 4 cut(s) 85, 572, 681, 1792
AcoI YGGCCR 1 cut(s) 1677
AcsI RAATTY 2 cut(s) 1100, 1252
AcuI CTGAAG 1 cut(s) 1851
AdeI CACNNNGTG 1 cut(s) 1466
AfaI GTAC 4 cut(s) 362, 875, 1009, 1215
AfiI CCNNNNNNNGG 2 cut(s) 379, 1466
AflIII ACRYGT 1 cut(s) 1127
AhdI GACNNNNNGTC 1 cut(s) 294
AjiI CACGTC 1 cut(s) 1724
AjnI CCWGG 5 cut(s) 376, 804, 1132, 1462, 1476
Alw21I GWGCWC 5 cut(s) 680, 1301, 1882, 1903, 1915
Alw26I GTCTC 2 cut(s) 702, 850
AlwI GGATC 4 cut(s) 85, 572, 681, 1792
AoxI GGCC 2 cut(s) 273, 1677
ApeKI GCWGC 9 cut(s) 128, 172, 262, 520, 632, 1085, 1321, 1694, 1892
ApoI RAATTY 2 cut(s) 1100, 1252
AspS9I GGNCC 3 cut(s) 61, 1743, 1776
AsuC2I CCSGG 1 cut(s) 481
AsuHPI GGTGA 2 cut(s) 1603, 1739
AsuII TTCGAA 1 cut(s) 1995
AvaII GGWCC 3 cut(s) 61, 1743, 1776
BaeGI GKGCMC 1 cut(s) 1927
BalI TGGCCA 1 cut(s) 1679
BanII GRGCYC 1 cut(s) 1301
BbsI GAAGAC 1 cut(s) 1525
Bbv12I GWGCWC 5 cut(s) 680, 1301, 1882, 1903, 1915
BbvI GCAGC 9 cut(s) 115, 159, 249, 507, 619, 1072, 1308, 1706, 1904
BccI CCATC 1 cut(s) 1479
BciT130I CCWGG 5 cut(s) 378, 806, 1134, 1464, 1478
BciVI GTATCC 1 cut(s) 1978
BclI TGATCA 1 cut(s) 1141
BcnI CCSGG 1 cut(s) 481
BcoDI GTCTC 2 cut(s) 702, 850
BfaI CTAG 7 cut(s) 861, 944, 1080, 1356, 1395, 1818, 2003
BfmI CTRYAG 4 cut(s) 429, 849, 891, 1209
BfuAI ACCTGC 1 cut(s) 804
BfuI GTATCC 1 cut(s) 1978
BmcAI AGTACT 1 cut(s) 1009
Bme1390I CCNGG 6 cut(s) 378, 481, 806, 1134, 1464, 1478
Bme18I GGWCC 3 cut(s) 61, 1743, 1776
BmeRI GACNNNNNGTC 1 cut(s) 294
BmgBI CACGTC 1 cut(s) 1724
BmgT120I GGNCC 3 cut(s) 61, 1743, 1776
BmiI GGNNCC 3 cut(s) 914, 1745, 1777
BmrFI CCNGG 6 cut(s) 378, 481, 806, 1134, 1464, 1478
BmrI ACTGGG 2 cut(s) 1227, 1298
BmsI GCATC 1 cut(s) 1605
BmuI ACTGGG 2 cut(s) 1227, 1298
BpiI GAAGAC 1 cut(s) 1525
BplI GAGNNNNNCTC 2 cut(s) 66, 98
BpmI CTGGAG 1 cut(s) 1112
Bpu14I TTCGAA 1 cut(s) 1995
BpuEI CTTGAG 1 cut(s) 680
BpuMI CCSGG 1 cut(s) 481
Bsa29I ATCGAT 1 cut(s) 576
BsaAI YACGTR 1 cut(s) 1859
BsaJI CCNNGG 4 cut(s) 238, 377, 479, 1779
BsaXI ACNNNNNCTCC 2 cut(s) 705, 735
Bsc4I CCNNNNNNNGG 2 cut(s) 379, 1466
Bse1I ACTGG 4 cut(s) 249, 1095, 1233, 1304
Bse3DI GCAATG 3 cut(s) 642, 1382, 1689
BseBI CCWGG 5 cut(s) 378, 806, 1134, 1464, 1478
BseCI ATCGAT 1 cut(s) 576
BseDI CCNNGG 4 cut(s) 238, 377, 479, 1779
BseGI GGATG 2 cut(s) 879, 1490
BseLI CCNNNNNNNGG 2 cut(s) 379, 1466
BseMI GCAATG 3 cut(s) 642, 1382, 1689
BseMII CTCAG 5 cut(s) 87, 126, 1287, 1446, 1977
BseNI ACTGG 4 cut(s) 249, 1095, 1233, 1304
BseSI GKGCMC 1 cut(s) 1927
BseXI GCAGC 9 cut(s) 115, 159, 249, 507, 619, 1072, 1308, 1706, 1904
BsgI GTGCAG 2 cut(s) 1071, 1791
Bsh1236I CGCG 1 cut(s) 1129
BshFI GGCC 2 cut(s) 275, 1679
BshVI ATCGAT 1 cut(s) 576
BsiHKAI GWGCWC 5 cut(s) 680, 1301, 1882, 1903, 1915
BsiSI CCGG 2 cut(s) 481, 1609
BslFI GGGAC 3 cut(s) 462, 1069, 1789
BslI CCNNNNNNNGG 2 cut(s) 379, 1466
BsmAI GTCTC 2 cut(s) 702, 850
BsmBI CGTCTC 1 cut(s) 702
BsmFI GGGAC 3 cut(s) 462, 1069, 1789
BsnI GGCC 2 cut(s) 275, 1679
Bsp119I TTCGAA 1 cut(s) 1995
Bsp1286I GDGCHC 6 cut(s) 680, 1301, 1882, 1903, 1915, 1927
Bsp143I GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
Bsp19I CCATGG 1 cut(s) 1779
BspACI CCGC 3 cut(s) 518, 883, 1553
BspANI GGCC 2 cut(s) 275, 1679
BspCNI CTCAG 5 cut(s) 88, 125, 1286, 1445, 1978
BspDI ATCGAT 1 cut(s) 576
BspFNI CGCG 1 cut(s) 1129
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 3 cut(s) 914, 1745, 1777
BspMAI CTGCAG 2 cut(s) 853, 895
BspMI ACCTGC 1 cut(s) 804
BspPI GGATC 4 cut(s) 85, 572, 681, 1792
BspT104I TTCGAA 1 cut(s) 1995
BsrDI GCAATG 3 cut(s) 642, 1382, 1689
BsrI ACTGG 4 cut(s) 249, 1095, 1233, 1304
BssECI CCNNGG 4 cut(s) 238, 377, 479, 1779
BssMI GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
BssT1I CCWWGG 2 cut(s) 238, 1779
Bst2UI CCWGG 5 cut(s) 378, 806, 1134, 1464, 1478
Bst4CI ACNGT 7 cut(s) 611, 721, 829, 1213, 1500, 1507, 1958
Bst6I CTCTTC 3 cut(s) 423, 980, 1868
BstBAI YACGTR 1 cut(s) 1859
BstBI TTCGAA 1 cut(s) 1995
BstC8I GCNNGC 2 cut(s) 331, 1450
BstDEI CTNAG 9 cut(s) 96, 112, 385, 691, 971, 1011, 1273, 1432, 1986
BstDSI CCRYGG 1 cut(s) 1779
BstF5I GGATG 2 cut(s) 879, 1490
BstFNI CGCG 1 cut(s) 1129
BstKTI GATC 7 cut(s) 80, 576, 580, 689, 970, 1144, 1787
BstMAI GTCTC 2 cut(s) 702, 850
BstMBI GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
BstMWI GCNNNNNNNGC 5 cut(s) 148, 848, 1330, 1691, 1898
BstNI CCWGG 5 cut(s) 378, 806, 1134, 1464, 1478
BstNSI RCATGY 2 cut(s) 146, 477
BstSCI CCNGG 6 cut(s) 376, 479, 804, 1132, 1462, 1476
BstSFI CTRYAG 4 cut(s) 429, 849, 891, 1209
BstSLI GKGCMC 1 cut(s) 1927
BstSNI TACGTA 1 cut(s) 1859
BstUI CGCG 1 cut(s) 1129
BstV1I GCAGC 9 cut(s) 115, 159, 249, 507, 619, 1072, 1308, 1706, 1904
BstV2I GAAGAC 1 cut(s) 1525
BstX2I RGATCY 3 cut(s) 77, 686, 1784
BstYI RGATCY 3 cut(s) 77, 686, 1784
Bsu15I ATCGAT 1 cut(s) 576
BsuI GTATCC 1 cut(s) 1978
BsuRI GGCC 2 cut(s) 275, 1679
BsuTUI ATCGAT 1 cut(s) 576
BtgI CCRYGG 1 cut(s) 1779
BtrI CACGTC 1 cut(s) 1724
BtsCI GGATG 2 cut(s) 879, 1490
BtsI GCAGTG 1 cut(s) 1671
BtsIMutI CAGTG 5 cut(s) 120, 256, 1088, 1619, 1671
BveI ACCTGC 1 cut(s) 804
Cac8I GCNNGC 2 cut(s) 331, 1450
CciI TCATGA 1 cut(s) 1237
Cfr13I GGNCC 3 cut(s) 61, 1743, 1776
ClaI ATCGAT 1 cut(s) 576
CseI GACGC 1 cut(s) 1118
CsiI ACCWGGT 1 cut(s) 1462
Csp6I GTAC 4 cut(s) 361, 874, 1008, 1214
CspCI CAANNNNNGTGG 2 cut(s) 609, 644
CviQI GTAC 4 cut(s) 361, 874, 1008, 1214
DdeI CTNAG 9 cut(s) 96, 112, 385, 691, 971, 1011, 1273, 1432, 1986
DpnI GATC 7 cut(s) 79, 575, 579, 688, 969, 1143, 1786
DpnII GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
DraIII CACNNNGTG 1 cut(s) 1466
DriI GACNNNNNGTC 1 cut(s) 294
EaeI YGGCCR 1 cut(s) 1677
Eam1104I CTCTTC 3 cut(s) 423, 980, 1868
Eam1105I GACNNNNNGTC 1 cut(s) 294
EarI CTCTTC 3 cut(s) 423, 980, 1868
Ecl136II GAGCTC 1 cut(s) 1299
Eco105I TACGTA 1 cut(s) 1859
Eco130I CCWWGG 2 cut(s) 238, 1779
Eco24I GRGCYC 1 cut(s) 1301
Eco32I GATATC 2 cut(s) 1761, 2009
Eco47I GGWCC 3 cut(s) 61, 1743, 1776
Eco53kI GAGCTC 1 cut(s) 1299
Eco57I CTGAAG 1 cut(s) 1851
EcoICRI GAGCTC 1 cut(s) 1299
EcoRI GAATTC 1 cut(s) 1252
EcoRII CCWGG 5 cut(s) 376, 804, 1132, 1462, 1476
EcoRV GATATC 2 cut(s) 1761, 2009
EcoT14I CCWWGG 2 cut(s) 238, 1779
EcoT38I GRGCYC 1 cut(s) 1301
ErhI CCWWGG 2 cut(s) 238, 1779
Esp3I CGTCTC 1 cut(s) 702
FaqI GGGAC 3 cut(s) 462, 1069, 1789
FbaI TGATCA 1 cut(s) 1141
FblI GTMKAC 1 cut(s) 1473
FokI GGATG 2 cut(s) 866, 1497
FriOI GRGCYC 1 cut(s) 1301
FspBI CTAG 7 cut(s) 861, 944, 1080, 1356, 1395, 1818, 2003
GsuI CTGGAG 1 cut(s) 1112
HaeIII GGCC 2 cut(s) 275, 1679
HapII CCGG 2 cut(s) 481, 1609
HgaI GACGC 1 cut(s) 1118
HincII GTYRAC 2 cut(s) 499, 1503
HindII GTYRAC 2 cut(s) 499, 1503
HindIII AAGCTT 2 cut(s) 228, 405
HinfI GANTC 6 cut(s) 4, 741, 1049, 1228, 1277, 1312
HpaII CCGG 2 cut(s) 481, 1609
HphI GGTGA 2 cut(s) 1603, 1739
Hpy166II GTNNAC 4 cut(s) 499, 762, 1474, 1503
Hpy188I TCNGA 9 cut(s) 65, 871, 967, 1150, 1182, 1258, 1276, 1758, 1870
Hpy188III TCNNGA 6 cut(s) 179, 286, 568, 593, 1238, 1309
Hpy8I GTNNAC 4 cut(s) 499, 762, 1474, 1503
HpyAV CCTTC 4 cut(s) 431, 487, 1615, 1724
HpyCH4III ACNGT 7 cut(s) 611, 721, 829, 1213, 1500, 1507, 1958
HpyCH4IV ACGT 5 cut(s) 201, 764, 980, 1723, 1858
HpyF10VI GCNNNNNNNGC 5 cut(s) 148, 848, 1330, 1691, 1898
HpyF3I CTNAG 9 cut(s) 96, 112, 385, 691, 971, 1011, 1273, 1432, 1986
HpySE526I ACGT 5 cut(s) 201, 764, 980, 1723, 1858
Ksp22I TGATCA 1 cut(s) 1141
Kzo9I GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
LmnI GCTCC 2 cut(s) 1093, 1304
Lsp1109I GCAGC 9 cut(s) 115, 159, 249, 507, 619, 1072, 1308, 1706, 1904
LweI GCATC 1 cut(s) 1605
MabI ACCWGGT 1 cut(s) 1462
MaeI CTAG 7 cut(s) 861, 944, 1080, 1356, 1395, 1818, 2003
MaeII ACGT 5 cut(s) 201, 764, 980, 1723, 1858
MaeIII GTNAC 8 cut(s) 117, 286, 611, 821, 1121, 1435, 1668, 1807
MalI GATC 7 cut(s) 79, 575, 579, 688, 969, 1143, 1786
MboI GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
MboII GAAGA 7 cut(s) 313, 410, 997, 1525, 1885, 1944, 2009
MfeI CAATTG 1 cut(s) 24
MflI RGATCY 3 cut(s) 77, 686, 1784
MhlI GDGCHC 6 cut(s) 680, 1301, 1882, 1903, 1915, 1927
MlsI TGGCCA 1 cut(s) 1679
MluCI AATT 7 cut(s) 24, 778, 904, 1100, 1158, 1252, 1738
MluI ACGCGT 1 cut(s) 1127
MluNI TGGCCA 1 cut(s) 1679
Mox20I TGGCCA 1 cut(s) 1679
MscI TGGCCA 1 cut(s) 1679
MseI TTAA 8 cut(s) 168, 204, 456, 903, 1025, 1247, 1491, 1527
MslI CAYNNNNRTG 2 cut(s) 1568, 1722
Msp20I TGGCCA 1 cut(s) 1679
MspA1I CMGCKG 3 cut(s) 520, 1321, 1553
MspI CCGG 2 cut(s) 481, 1609
MspR9I CCNGG 6 cut(s) 378, 481, 806, 1134, 1464, 1478
MunI CAATTG 1 cut(s) 24
MvaI CCWGG 5 cut(s) 378, 806, 1134, 1464, 1478
MvnI CGCG 1 cut(s) 1129
MwoI GCNNNNNNNGC 5 cut(s) 148, 848, 1330, 1691, 1898
NciI CCSGG 1 cut(s) 481
NcoI CCATGG 1 cut(s) 1779
NdeII GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
NlaIV GGNNCC 3 cut(s) 914, 1745, 1777
NmuCI GTSAC 3 cut(s) 286, 1668, 1807
NspI RCATGY 2 cut(s) 146, 477
NspV TTCGAA 1 cut(s) 1995
PagI TCATGA 1 cut(s) 1237
PfeI GAWTC 6 cut(s) 4, 741, 1049, 1228, 1277, 1312
PflFI GACNNNGTC 1 cut(s) 59
PflMI CCANNNNNTGG 1 cut(s) 1466
PfoI TCCNGGA 1 cut(s) 1132
Ppu21I YACGTR 1 cut(s) 1859
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 1301
Psp1406I AACGTT 1 cut(s) 201
Psp6I CCWGG 5 cut(s) 376, 804, 1132, 1462, 1476
PspGI CCWGG 5 cut(s) 376, 804, 1132, 1462, 1476
PspN4I GGNNCC 3 cut(s) 914, 1745, 1777
PspPI GGNCC 3 cut(s) 61, 1743, 1776
PstI CTGCAG 2 cut(s) 853, 895
PsuI RGATCY 3 cut(s) 77, 686, 1784
PsyI GACNNNGTC 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 1321
RsaI GTAC 4 cut(s) 362, 875, 1009, 1215
RsaNI GTAC 4 cut(s) 361, 874, 1008, 1214
RseI CAYNNNNRTG 2 cut(s) 1568, 1722
SacI GAGCTC 1 cut(s) 1301
SaqAI TTAA 8 cut(s) 168, 204, 456, 903, 1025, 1247, 1491, 1527
Sau3AI GATC 7 cut(s) 77, 573, 577, 686, 967, 1141, 1784
Sau96I GGNCC 3 cut(s) 61, 1743, 1776
ScaI AGTACT 1 cut(s) 1009
ScrFI CCNGG 6 cut(s) 378, 481, 806, 1134, 1464, 1478
SduI GDGCHC 6 cut(s) 680, 1301, 1882, 1903, 1915, 1927
SexAI ACCWGGT 1 cut(s) 1462
SfaNI GCATC 1 cut(s) 1605
SfcI CTRYAG 4 cut(s) 429, 849, 891, 1209
SfuI TTCGAA 1 cut(s) 1995
SinI GGWCC 3 cut(s) 61, 1743, 1776
SmiMI CAYNNNNRTG 2 cut(s) 1568, 1722
SmlI CTYRAG 1 cut(s) 659
SmoI CTYRAG 1 cut(s) 659
SnaBI TACGTA 1 cut(s) 1859
Sse9I AATT 7 cut(s) 24, 778, 904, 1100, 1158, 1252, 1738
SsiI CCGC 3 cut(s) 518, 883, 1553
SspMI CTAG 7 cut(s) 861, 944, 1080, 1356, 1395, 1818, 2003
SstI GAGCTC 1 cut(s) 1301
StyD4I CCNGG 6 cut(s) 376, 479, 804, 1132, 1462, 1476
StyI CCWWGG 2 cut(s) 238, 1779
TaaI ACNGT 7 cut(s) 611, 721, 829, 1213, 1500, 1507, 1958
TaiI ACGT 5 cut(s) 204, 767, 983, 1726, 1861
TaqI TCGA 3 cut(s) 447, 576, 1995
TasI AATT 7 cut(s) 24, 778, 904, 1100, 1158, 1252, 1738
TatI WGTACW 4 cut(s) 360, 873, 1007, 1213
TauI GCSGC 2 cut(s) 520, 1556
TfiI GAWTC 6 cut(s) 4, 741, 1049, 1228, 1277, 1312
Tru1I TTAA 8 cut(s) 168, 204, 456, 903, 1025, 1247, 1491, 1527
Tru9I TTAA 8 cut(s) 168, 204, 456, 903, 1025, 1247, 1491, 1527
TscAI CASTG 5 cut(s) 120, 256, 1095, 1626, 1671
TseFI GTSAC 3 cut(s) 286, 1668, 1807
TseI GCWGC 9 cut(s) 128, 172, 262, 520, 632, 1085, 1321, 1694, 1892
Tsp45I GTSAC 3 cut(s) 286, 1668, 1807
TspGWI ACGGA 2 cut(s) 58, 726
TspRI CASTG 5 cut(s) 120, 256, 1095, 1626, 1671
Tth111I GACNNNGTC 1 cut(s) 59
Van91I CCANNNNNTGG 1 cut(s) 1466
VpaK11BI GGWCC 3 cut(s) 61, 1743, 1776
XapI RAATTY 2 cut(s) 1100, 1252
XceI RCATGY 2 cut(s) 146, 477
XmiI GTMKAC 1 cut(s) 1473
XspI CTAG 7 cut(s) 861, 944, 1080, 1356, 1395, 1818, 2003
ZrmI AGTACT 1 cut(s) 1009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.