Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005104.1

Orthogroup ID

OG0000173

Physical Location & Seq

Genomic Coordinates Forward (+)

37578 .. 43147

Gene Structure 5570 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005104.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

atgtggaagcttaaggtttcagaaggtggggaagattcctcggcttacatttacagcacgaacaacttcgtggggaggcagacatgggagtttgatcccaacgcaggaactgctgaagagcgagctgaggttgaagccgctcgtcttcatttctacaacaaccgccatcaggttaagcccagtggtgaccttctttggagaatgcagttcctaagggagaagaagttcaaacagacaattcctccagtaaaagttgaagatggcgaggttatcacacatgaaaaaaccacagatgcattgagaaggtctgtccacttcttctcagcgttgcaggcaagcgatggccattggcctgcggaaaatgcaggccctttgtttttgcttcctcctttggtcatagttatgcacattacggggcatcttaacagtgtattctctaaggagcattgcaaagaaattctgcgttacatatactatcatcaggtatatcagaatgaagatggtggttggggactacatgtcgaaggtcatagcaccatgttcagcacagctctcagctacatttgtatgcgtattctcggagaaggacctgatgatggtggccaagacaatgcttgtccaagagcaagaaagtggattcttgatcatggtggtgtcacacacataccctcttggggaaagacttggctttcggaggatatatactaccctcatccttggatacaggatctcctttgggatagcctctacatttccacagagcctcttcttacccgttggcccttcaacaagttgatcagagaaaaggctcttcaagtgacgatgaggcatattcattacgaagatgagaacagccgatacattaccctagggtgtgtggaaaaggtgttatgcatgcttgcctgttgggctgaagatccaaatggagactatttcaagaagcatcttgctaggatcccggattatttatgggttgctgaagatgggatgaagatgcaagcttctagcagtcaggagtgggatactagtcttgccattcaagctttgcttgccagtaatctcatggatgaaattgaaccaacgcttgctagaggacatgacttcataaagaaatctcaggtcaaggacaacccatctggtgacttcaaaagcatgtaccgccacatttctaaaggatcgtggactttctccgatcaagatcatggatggcaagtttctgattgcactgcagaaggtttaaagagcaagaatggtggtttatcagcctggcaaccagcaggggcagcagaatggttagaactgttaaatccgacagaattcttcgaggacattgtgattgagcatgaacatgttgagtgcacttcatctgtcatccaggctttagttctgtttaagaagctacatcctgggcacaggaagaaagaggttgaatattccatcaccaatgctgtacactacattgaaaatatacaaatgccggatggttcatggtatggagattggggagtttgcttcacatatggtacctggtttgcactaggaggattggcagctgctggcaagacttttagcacttctgcagccatgcgcaacggggttagctttctacttatgactcagagagagaatggtggttggggagagagctatctttcatgtccacaaaagacatacattcctcttgaaggaaaccgatccaatctggtacagactgcttgggctatgatgggtctcattcatgcgggacaagcagaaagaaacccgacacctcttcatcgtgcagcaaagtttataatcaattctcaactggaaaatggtgattttcctcagcaggaaatcactggagtcttcaagaagaactgcatgctacattatgcagcatatagaaatatatacccactgtgggctcttgcagaatatcgcaatcgggttccgttgccttccaagggctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0019742 GO:0019745 GO:0031559 GO:0042300 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00909 ko01110 map00909 map01110

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

650

Amino Acids

74.09

Weight (kDa)

6.06

Isoelectric Point (pI)

41.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca	FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica	MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica	Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis	pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis	RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata	RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora	Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii	Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa	Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha	Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana	Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1793
Acc16I	TGCGCA	1 cut(s)	1589
Acc65I	GGTACC	1 cut(s)	1523
AccB1I	GGYRCC	1 cut(s)	1523
AccBSI	CCGCTC	1 cut(s)	140
AciI	CCGC	5 cut(s)	138, 163, 356, 1159, 1742
AclWI	GGATC	7 cut(s)	89, 735, 911, 949, 962, 1183, 1689
AcoI	YGGCCR	2 cut(s)	343, 601
AcsI	RAATTY	2 cut(s)	456, 1316
AcuI	CTGAAG	3 cut(s)	135, 933, 999
AfaI	GTAC	4 cut(s)	1157, 1452, 1525, 1707
AfiI	CCNNNNNNNGG	7 cut(s)	104, 169, 596, 674, 1685, 1903, 1946
AflII	CTTAAG	1 cut(s)	11
AflIII	ACRYGT	2 cut(s)	517, 1348
AhdI	GACNNNNNGTC	1 cut(s)	518
AhlI	ACTAGT	1 cut(s)	1025
AjnI	CCWGG	4 cut(s)	1265, 1374, 1405, 1526
AloI	GAACNNNNNNTCC	2 cut(s)	209, 241
Alw21I	GWGCWC	1 cut(s)	1361
Alw26I	GTCTC	2 cut(s)	921, 1736
Alw44I	GTGCAC	1 cut(s)	1357
AlwI	GGATC	7 cut(s)	89, 735, 911, 949, 962, 1183, 1689
AlwNI	CAGNNNCTG	2 cut(s)	110, 1556
AoxI	GGCC	5 cut(s)	343, 350, 367, 601, 779
ApaLI	GTGCAC	1 cut(s)	1357
ApeKI	GCWGC	6 cut(s)	1283, 1550, 1553, 1580, 1781, 1877
ApoI	RAATTY	2 cut(s)	456, 1316
ArsI	GACNNNNNNTTYG	2 cut(s)	673, 705
Asp700I	GAANNNNTTC	2 cut(s)	65, 224
Asp718I	GGTACC	1 cut(s)	1523
AspA2I	CCTAGG	1 cut(s)	868
AspLEI	GCGC	1 cut(s)	1590
AspS9I	GGNCC	3 cut(s)	368, 587, 780
AsuC2I	CCSGG	1 cut(s)	959
AsuHPI	GGTGA	4 cut(s)	197, 1151, 1432, 1829
AvaII	GGWCC	1 cut(s)	587
AvrII	CCTAGG	1 cut(s)	868
AxyI	CCTNAGG	1 cut(s)	212
BaeGI	GKGCMC	2 cut(s)	1361, 1413
BalI	TGGCCA	2 cut(s)	345, 603
BamHI	GGATCC	1 cut(s)	954
BanI	GGYRCC	1 cut(s)	1523
BanII	GRGCYC	1 cut(s)	1909
BbsI	GAAGAC	2 cut(s)	137, 1840
Bbv12I	GWGCWC	1 cut(s)	1361
BbvCI	CCTCAGC	2 cut(s)	126, 1827
BbvI	GCAGC	6 cut(s)	1295, 1540, 1562, 1592, 1793, 1889
BciT130I	CCWGG	4 cut(s)	1267, 1376, 1407, 1528
BciVI	GTATCC	2 cut(s)	714, 1015
BclI	TGATCA	2 cut(s)	643, 795
BcnI	CCSGG	1 cut(s)	959
BcoDI	GTCTC	2 cut(s)	921, 1736
BcuI	ACTAGT	1 cut(s)	1025
BfaI	CTAG	6 cut(s)	869, 951, 1005, 1026, 1089, 1538
BfmI	CTRYAG	2 cut(s)	1227, 1578
BfrI	CTTAAG	1 cut(s)	11
BfuI	GTATCC	2 cut(s)	714, 1015
BglI	GCCNNNNNGGC	1 cut(s)	908
BisI	GCNGC	7 cut(s)	138, 1284, 1551, 1554, 1581, 1782, 1878
BlnI	CCTAGG	1 cut(s)	868
BlsI	GCNGC	7 cut(s)	139, 1285, 1552, 1555, 1582, 1783, 1879
Bme1390I	CCNGG	5 cut(s)	959, 1267, 1376, 1407, 1528
Bme18I	GGWCC	1 cut(s)	587
BmeRI	GACNNNNNGTC	1 cut(s)	518
BmgT120I	GGNCC	3 cut(s)	368, 587, 780
BmiI	GGNNCC	3 cut(s)	956, 1525, 1932
BmrFI	CCNGG	5 cut(s)	959, 1267, 1376, 1407, 1528
BmrI	ACTGGG	1 cut(s)	174
BmsI	GCATC	4 cut(s)	283, 427, 952, 984
BmuI	ACTGGG	1 cut(s)	174
BpiI	GAAGAC	2 cut(s)	137, 1840
BpmI	CTGGAG	2 cut(s)	228, 1863
Bpu10I	CCTNAGC	2 cut(s)	126, 1827
BpuMI	CCSGG	1 cut(s)	959
BsaBI	GATNNNNATC	1 cut(s)	1197
BsaI	GGTCTC	1 cut(s)	1736
BsaJI	CCNNGG	5 cut(s)	39, 716, 868, 1406, 1944
BsaXI	ACNNNNNCTCC	6 cut(s)	209, 226, 239, 256, 714, 744
Bsc4I	CCNNNNNNNGG	7 cut(s)	104, 169, 596, 674, 1685, 1903, 1946
Bse1I	ACTGG	5 cut(s)	180, 245, 1053, 1812, 1846
Bse21I	CCTNAGG	1 cut(s)	212
Bse3DI	GCAATG	1 cut(s)	445
Bse8I	GATNNNNATC	1 cut(s)	1197
BseBI	CCWGG	4 cut(s)	1267, 1376, 1407, 1528
BseDI	CCNNGG	5 cut(s)	39, 716, 868, 1406, 1944
BseGI	GGATG	7 cut(s)	712, 993, 1072, 1211, 1371, 1402, 1486
BseJI	GATNNNNATC	1 cut(s)	1197
BseLI	CCNNNNNNNGG	7 cut(s)	104, 169, 596, 674, 1685, 1903, 1946
BseMI	GCAATG	1 cut(s)	445
BseMII	CTCAG	6 cut(s)	117, 336, 568, 1130, 1631, 1841
BseNI	ACTGG	5 cut(s)	180, 245, 1053, 1812, 1846
BseSI	GKGCMC	2 cut(s)	1361, 1413
BseXI	GCAGC	6 cut(s)	1295, 1540, 1562, 1592, 1793, 1889
BsgI	GTGCAG	1 cut(s)	1800
BshFI	GGCC	5 cut(s)	345, 352, 369, 603, 781
BshNI	GGYRCC	1 cut(s)	1523
BsiHKAI	GWGCWC	1 cut(s)	1361
BsiSI	CCGG	2 cut(s)	959, 1478
BslFI	GGGAC	2 cut(s)	525, 1758
BslI	CCNNNNNNNGG	7 cut(s)	104, 169, 596, 674, 1685, 1903, 1946
BsmAI	GTCTC	2 cut(s)	921, 1736
BsmFI	GGGAC	2 cut(s)	525, 1758
BsmI	GAATGC	1 cut(s)	207
BsnI	GGCC	5 cut(s)	345, 352, 369, 603, 781
Bso31I	GGTCTC	1 cut(s)	1736
Bsp1286I	GDGCHC	3 cut(s)	1361, 1413, 1909
Bsp1407I	TGTACA	1 cut(s)	1450
BspACI	CCGC	5 cut(s)	138, 163, 356, 1159, 1742
BspANI	GGCC	5 cut(s)	345, 352, 369, 603, 781
BspCNI	CTCAG	6 cut(s)	118, 335, 567, 1129, 1630, 1840
BspLI	GGNNCC	3 cut(s)	956, 1525, 1932
BspMAI	CTGCAG	2 cut(s)	1231, 1582
BspPI	GGATC	7 cut(s)	89, 735, 911, 949, 962, 1183, 1689
BspQI	GCTCTTC	2 cut(s)	111, 816
BspT107I	GGYRCC	1 cut(s)	1523
BspTI	CTTAAG	1 cut(s)	11
BspTNI	GGTCTC	1 cut(s)	1736
BsrBI	CCGCTC	1 cut(s)	140
BsrDI	GCAATG	1 cut(s)	445
BsrGI	TGTACA	1 cut(s)	1450
BsrI	ACTGG	5 cut(s)	180, 245, 1053, 1812, 1846
BssECI	CCNNGG	5 cut(s)	39, 716, 868, 1406, 1944
BssT1I	CCWWGG	3 cut(s)	716, 868, 1944
Bst2UI	CCWGG	4 cut(s)	1267, 1376, 1407, 1528
Bst4CI	ACNGT	3 cut(s)	428, 1302, 1902
Bst6I	CTCTTC	4 cut(s)	111, 771, 816, 1776
BstAFI	CTTAAG	1 cut(s)	11
BstAPI	GCANNNNNTGC	1 cut(s)	110
BstAUI	TGTACA	1 cut(s)	1450
BstDEI	CTNAG	8 cut(s)	126, 212, 322, 438, 554, 1116, 1617, 1827
BstEII	GGTNACC	1 cut(s)	185
BstENI	CCTNNNNNAGG	1 cut(s)	1683
BstF5I	GGATG	7 cut(s)	712, 993, 1072, 1211, 1371, 1402, 1486
BstHHI	GCGC	1 cut(s)	1590
BstMAI	GTCTC	2 cut(s)	921, 1736
BstMWI	GCNNNNNNNGC	9 cut(s)	110, 332, 362, 908, 1040, 1049, 1158, 1283, 1748
BstNI	CCWGG	4 cut(s)	1267, 1376, 1407, 1528
BstNSI	RCATGY	5 cut(s)	521, 898, 1156, 1352, 1867
BstPI	GGTNACC	1 cut(s)	185
BstSCI	CCNGG	5 cut(s)	957, 1265, 1374, 1405, 1526
BstSFI	CTRYAG	2 cut(s)	1227, 1578
BstSLI	GKGCMC	2 cut(s)	1361, 1413
BstV1I	GCAGC	6 cut(s)	1295, 1540, 1562, 1592, 1793, 1889
BstV2I	GAAGAC	2 cut(s)	137, 1840
BstX2I	RGATCY	3 cut(s)	727, 916, 954
BstYI	RGATCY	3 cut(s)	727, 916, 954
Bsu36I	CCTNAGG	1 cut(s)	212
BsuI	GTATCC	2 cut(s)	714, 1015
BsuRI	GGCC	5 cut(s)	345, 352, 369, 603, 781
BtgZI	GCGATG	1 cut(s)	354
BtsCI	GGATG	7 cut(s)	712, 993, 1072, 1211, 1371, 1402, 1486
BtsI	GCAGTG	1 cut(s)	1224
BtsIMutI	CAGTG	5 cut(s)	187, 433, 1224, 1839, 1898
CaiI	CAGNNNCTG	2 cut(s)	110, 1556
CfoI	GCGC	1 cut(s)	1590
Cfr13I	GGNCC	3 cut(s)	368, 587, 780
CsiI	ACCWGGT	1 cut(s)	1526
Csp6I	GTAC	4 cut(s)	1156, 1451, 1524, 1706
CspCI	CAANNNNNGTGG	2 cut(s)	1234, 1269
CviQI	GTAC	4 cut(s)	1156, 1451, 1524, 1706
DdeI	CTNAG	8 cut(s)	126, 212, 322, 438, 554, 1116, 1617, 1827
DraI	TTTAAA	1 cut(s)	1239
DriI	GACNNNNNGTC	1 cut(s)	518
EaeI	YGGCCR	2 cut(s)	343, 601
Eam1104I	CTCTTC	4 cut(s)	111, 771, 816, 1776
Eam1105I	GACNNNNNGTC	1 cut(s)	518
EarI	CTCTTC	4 cut(s)	111, 771, 816, 1776
Eco130I	CCWWGG	3 cut(s)	716, 868, 1944
Eco24I	GRGCYC	1 cut(s)	1909
Eco31I	GGTCTC	1 cut(s)	1736
Eco47I	GGWCC	1 cut(s)	587
Eco57I	CTGAAG	3 cut(s)	135, 933, 999
Eco81I	CCTNAGG	1 cut(s)	212
Eco91I	GGTNACC	1 cut(s)	185
EcoNI	CCTNNNNNAGG	1 cut(s)	1683
EcoO109I	RGGNCCY	2 cut(s)	368, 587
EcoO65I	GGTNACC	1 cut(s)	185
EcoRI	GAATTC	1 cut(s)	1316
EcoRII	CCWGG	4 cut(s)	1265, 1374, 1405, 1526
EcoT14I	CCWWGG	3 cut(s)	716, 868, 1944
EcoT22I	ATGCAT	2 cut(s)	298, 896
EcoT38I	GRGCYC	1 cut(s)	1909
ErhI	CCWWGG	3 cut(s)	716, 868, 1944
FalI	AAGNNNNNCTT	2 cut(s)	1032, 1064
FaqI	GGGAC	2 cut(s)	525, 1758
FauI	CCCGC	1 cut(s)	1735
FauNDI	CATATG	1 cut(s)	1519
FbaI	TGATCA	2 cut(s)	643, 795
Fnu4HI	GCNGC	7 cut(s)	138, 1284, 1551, 1554, 1581, 1782, 1878
FokI	GGATG	7 cut(s)	699, 1000, 1079, 1218, 1358, 1389, 1493
FriOI	GRGCYC	1 cut(s)	1909
Fsp4HI	GCNGC	7 cut(s)	138, 1284, 1551, 1554, 1581, 1782, 1878
FspBI	CTAG	6 cut(s)	869, 951, 1005, 1026, 1089, 1538
FspI	TGCGCA	1 cut(s)	1589
GlaI	GCGC	1 cut(s)	1589
GluI	GCNGC	7 cut(s)	138, 1284, 1551, 1554, 1581, 1782, 1878
GsuI	CTGGAG	2 cut(s)	228, 1863
HaeIII	GGCC	5 cut(s)	345, 352, 369, 603, 781
HapII	CCGG	2 cut(s)	959, 1478
HhaI	GCGC	1 cut(s)	1590
Hin6I	GCGC	1 cut(s)	1588
HinP1I	GCGC	1 cut(s)	1588
HindIII	AAGCTT	3 cut(s)	8, 999, 1041
HinfI	GANTC	4 cut(s)	35, 637, 1615, 1845
HpaII	CCGG	2 cut(s)	959, 1478
HphI	GGTGA	4 cut(s)	197, 1151, 1432, 1829
Hpy166II	GTNNAC	5 cut(s)	313, 1182, 1359, 1453, 1661
Hpy188I	TCNGA	9 cut(s)	22, 492, 581, 694, 800, 1192, 1219, 1311, 1620
Hpy188III	TCNNGA	6 cut(s)	641, 937, 1013, 1196, 1682, 1852
Hpy8I	GTNNAC	5 cut(s)	313, 1182, 1359, 1453, 1661
HpyAV	CCTTC	9 cut(s)	17, 200, 297, 518, 578, 793, 1226, 1679, 1950
HpyCH4III	ACNGT	3 cut(s)	428, 1302, 1902
HpyF10VI	GCNNNNNNNGC	9 cut(s)	110, 332, 362, 908, 1040, 1049, 1158, 1283, 1748
HpyF3I	CTNAG	8 cut(s)	126, 212, 322, 438, 554, 1116, 1617, 1827
HspAI	GCGC	1 cut(s)	1588
KpnI	GGTACC	1 cut(s)	1527
Ksp22I	TGATCA	2 cut(s)	643, 795
LguI	GCTCTTC	2 cut(s)	111, 816
LmnI	GCTCC	1 cut(s)	442
Lsp1109I	GCAGC	6 cut(s)	1295, 1540, 1562, 1592, 1793, 1889
LweI	GCATC	4 cut(s)	283, 427, 952, 984
MabI	ACCWGGT	1 cut(s)	1526
MaeI	CTAG	6 cut(s)	869, 951, 1005, 1026, 1089, 1538
MaeIII	GTNAC	5 cut(s)	185, 464, 655, 817, 1139
MbiI	CCGCTC	1 cut(s)	140
MflI	RGATCY	3 cut(s)	727, 916, 954
MhlI	GDGCHC	3 cut(s)	1361, 1413, 1909
MlsI	TGGCCA	2 cut(s)	345, 603
MluCI	AATT	5 cut(s)	237, 456, 1071, 1316, 1798
MluNI	TGGCCA	2 cut(s)	345, 603
MlyI	GAGTC	2 cut(s)	1609, 1854
MmeI	TCCRAC	1 cut(s)	1334
Mox20I	TGGCCA	2 cut(s)	345, 603
Mph1103I	ATGCAT	2 cut(s)	298, 896
MroXI	GAANNNNTTC	2 cut(s)	65, 224
MscI	TGGCCA	2 cut(s)	345, 603
MseI	TTAA	6 cut(s)	12, 174, 423, 1238, 1304, 1392
MslI	CAYNNNNRTG	4 cut(s)	401, 566, 651, 1347
Msp20I	TGGCCA	2 cut(s)	345, 603
MspA1I	CMGCKG	1 cut(s)	1553
MspCI	CTTAAG	1 cut(s)	11
MspI	CCGG	2 cut(s)	959, 1478
MspR9I	CCNGG	5 cut(s)	959, 1267, 1376, 1407, 1528
Mva1269I	GAATGC	1 cut(s)	207
MvaI	CCWGG	4 cut(s)	1267, 1376, 1407, 1528
MwoI	GCNNNNNNNGC	9 cut(s)	110, 332, 362, 908, 1040, 1049, 1158, 1283, 1748
NciI	CCSGG	1 cut(s)	959
NdeI	CATATG	1 cut(s)	1519
NlaIV	GGNNCC	3 cut(s)	956, 1525, 1932
NmeAIII	GCCGAG	1 cut(s)	20
NmuCI	GTSAC	4 cut(s)	185, 655, 817, 1139
NsbI	TGCGCA	1 cut(s)	1589
NsiI	ATGCAT	2 cut(s)	298, 896
NspI	RCATGY	5 cut(s)	521, 898, 1156, 1352, 1867
PaeI	GCATGC	2 cut(s)	898, 1867
PciI	ACATGT	2 cut(s)	517, 1348
PciSI	GCTCTTC	2 cut(s)	111, 816
PctI	GAATGC	1 cut(s)	207
PdmI	GAANNNNTTC	2 cut(s)	65, 224
PfeI	GAWTC	2 cut(s)	35, 637
PfoI	TCCNGGA	1 cut(s)	957
PkrI	GCNGC	7 cut(s)	139, 1285, 1552, 1555, 1582, 1783, 1879
PleI	GAGTC	2 cut(s)	1609, 1853
PpsI	GAGTC	2 cut(s)	1609, 1853
PpuMI	RGGWCCY	1 cut(s)	587
PscI	ACATGT	2 cut(s)	517, 1348
PsiI	TTATAA	1 cut(s)	1793
Psp5II	RGGWCCY	1 cut(s)	587
Psp6I	CCWGG	4 cut(s)	1265, 1374, 1405, 1526
PspEI	GGTNACC	1 cut(s)	185
PspGI	CCWGG	4 cut(s)	1265, 1374, 1405, 1526
PspN4I	GGNNCC	3 cut(s)	956, 1525, 1932
PspPI	GGNCC	3 cut(s)	368, 587, 780
PspPPI	RGGWCCY	1 cut(s)	587
PsrI	GAACNNNNNNTAC	2 cut(s)	842, 874
PstI	CTGCAG	2 cut(s)	1231, 1582
PstNI	CAGNNNCTG	2 cut(s)	110, 1556
PsuI	RGATCY	3 cut(s)	727, 916, 954
PvuII	CAGCTG	1 cut(s)	1553
RsaI	GTAC	4 cut(s)	1157, 1452, 1525, 1707
RsaNI	GTAC	4 cut(s)	1156, 1451, 1524, 1706
RseI	CAYNNNNRTG	4 cut(s)	401, 566, 651, 1347
SapI	GCTCTTC	2 cut(s)	111, 816
SaqAI	TTAA	6 cut(s)	12, 174, 423, 1238, 1304, 1392
SatI	GCNGC	7 cut(s)	138, 1284, 1551, 1554, 1581, 1782, 1878
Sau96I	GGNCC	3 cut(s)	368, 587, 780
SchI	GAGTC	2 cut(s)	1609, 1854
ScrFI	CCNGG	5 cut(s)	959, 1267, 1376, 1407, 1528
SduI	GDGCHC	3 cut(s)	1361, 1413, 1909
SexAI	ACCWGGT	1 cut(s)	1526
SfaNI	GCATC	4 cut(s)	283, 427, 952, 984
SfcI	CTRYAG	2 cut(s)	1227, 1578
SinI	GGWCC	1 cut(s)	587
SmiMI	CAYNNNNRTG	4 cut(s)	401, 566, 651, 1347
SmlI	CTYRAG	1 cut(s)	11
SmoI	CTYRAG	1 cut(s)	11
SpeI	ACTAGT	1 cut(s)	1025
SphI	GCATGC	2 cut(s)	898, 1867
Sse9I	AATT	5 cut(s)	237, 456, 1071, 1316, 1798
SsiI	CCGC	5 cut(s)	138, 163, 356, 1159, 1742
SspI	AATATT	1 cut(s)	1433
SspMI	CTAG	6 cut(s)	869, 951, 1005, 1026, 1089, 1538
StyD4I	CCNGG	5 cut(s)	957, 1265, 1374, 1405, 1526
StyI	CCWWGG	3 cut(s)	716, 868, 1944
TaaI	ACNGT	3 cut(s)	428, 1302, 1902
TaqI	TCGA	2 cut(s)	522, 1323
TasI	AATT	5 cut(s)	237, 456, 1071, 1316, 1798
TatI	WGTACW	1 cut(s)	1450
TauI	GCSGC	1 cut(s)	140
TfiI	GAWTC	2 cut(s)	35, 637
Tru1I	TTAA	6 cut(s)	12, 174, 423, 1238, 1304, 1392
Tru9I	TTAA	6 cut(s)	12, 174, 423, 1238, 1304, 1392
TscAI	CASTG	5 cut(s)	187, 433, 1231, 1846, 1905
TseFI	GTSAC	4 cut(s)	185, 655, 817, 1139
TseI	GCWGC	6 cut(s)	1283, 1550, 1553, 1580, 1781, 1877
Tsp45I	GTSAC	4 cut(s)	185, 655, 817, 1139
TspGWI	ACGGA	1 cut(s)	1923
TspRI	CASTG	5 cut(s)	187, 433, 1231, 1846, 1905
Vha464I	CTTAAG	1 cut(s)	11
VneI	GTGCAC	1 cut(s)	1357
VpaK11BI	GGWCC	1 cut(s)	587
XagI	CCTNNNNNAGG	1 cut(s)	1683
XapI	RAATTY	2 cut(s)	456, 1316
XceI	RCATGY	5 cut(s)	521, 898, 1156, 1352, 1867
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1060
XmaJI	CCTAGG	1 cut(s)	868
XmnI	GAANNNNTTC	2 cut(s)	65, 224
XspI	CTAG	6 cut(s)	869, 951, 1005, 1026, 1089, 1538
Zsp2I	ATGCAT	2 cut(s)	298, 896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.