Rw2G039290

Belongs to the terpene cyclase mutase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
64294279 .. 64302211
7933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G039290.1

Sequence Viewer

Length: 2202 bp
ATGTGGAAGCTTAAGGTTGCAGAAGGTGGAGAAGACTCCTCGGCTTACATTTCCAGCACTAACAACTTCGTGGGAAGGCAGACTTGGGAGTTTGATCCTGACGCAGGAACTGCTGAAGAGCGAGCTGAGGTTGAAGCGGCTCGTCTTCATTTCTACAACAACCGCCATCAGGTTAAGCCCAGTGGTGACCTTCTTTGGAGATTGCAGTTCCTAAGGGAGAAGAAGTTCAAACAGACAATTCCTCCAGTAAAAGTTGAAGATGGCGAGGTTATCACGCATGAAAAAACCACAGATGCGCTGAGAAGGTCTGTCCGCTTCTTCTCAGCGTTGCAGGCAAGCGATGGCCATTGGCCTGCAGAAAATGCCGGCCCTTTGTTTTTCCTTCCTCCTTTGGTCATAGTTATGCACATTACGGGGCATCTTAACAGTGTATTCTCTGAGGAGCATCGCAAAGAAATTCTGCGATACATATACTATCATCAGAATGAAGATGGTGGTTGGGGACTACATGTCGAAGGTCATAGCATCATGTTCAGTACAGCTCTCAGCTACATTTGTATGCGTATTCTTGGAGAAGGACCTAATGATGGTGGCCAAGACAATGCTTGTCCAAGAGCAAGAAAGTGGATTCTTGATCATGGTGGTGTCACACACATACCCTTTTGGGGAAAGACTTGGCTTTCGATACTTGGTTTGTTTAATTGGTCCGGAAGCAACCCTATCCCGCCAGAGCTTTGGATTATTCCTTCATTTTTTCCTGTGCATCCAGCAAAAATGTGGTGCTATAGTAGGATGGTTTACATGCCAATGTCATACCTATATGGAAAGAGGTTTGTTGGCCCAATTACACCTCTCATTCTTCAATTGAGGGAAGAACTTTTCATTCAATCTTACAATGAAATCAATTGGAAGGAAGTACGCCATCTATGTGCTAAAGAGGATATATACTACCCTCATCCTTGGATCCAGGATCTCCTTTGGGATAGCCTCTACACTTCCACAGAGCCTCTTCTTACCTGTTGGCCCTTCAACAAGTTGATCAGAGAAAAGGCTCTACAAGTGACGATGAAGCATATTCATTATGAAGATGTGAACAGCCGATTCATTACTATGGGGTGTGTGGAAAAGGTGTTATGTATGCTTGCCTGTTGGGCTGAAGATCCAAATGGGGACTATTTCAAAAAGCATCTCACTTTTGGCAGTCAGGTGTGGGATACTAGTTTTGCCATTCAAGCTTTGCTTGCTAGTAATCTCACTGATGAAATTGGACCAACGCTCTCTAGAGGACATGATTTCATAAAGAAATCTCAGGTCAAGGACAACCCATCTGGTGACTTCAAAAGCATGTACCGCCACATTTCTAAAGGATCGTGGACTTTCTCCGATCAAGATCATGGATGGCAAGCTTCTGATACCACTGCAGAAGGTTTAAAGTGTTGCCTTCTGTTGTCGATGATGCCATCGGAGATAGTTGGTGAAAAAATGGAGCCTGAGCGCTTGTACGATTCTGTCAATGTTCTATTTTCCCTGCAGAGCAAGAATGGTGGTTTATCAGCCTGGGAACCGGCAGGGGCAGCAGAATGGTTAGAACTGTTAAATCCGACAGAATTGTTCGAGGACATTGTGATTGAGCATGAACATGTTGAGTGCACTTCATCTGTACTCCAGGCTTTGGTTCTGTTTAAGAAGCTACACCCTGAGCACAGGAAGAAAGAGGTTGAATATTCCATCATCAATGCTGTACACTACATTGAAAATATACAAATGCCGGATGGATCATGGTATGGAGATTGGGGAGTTTGCTTCACATATGGTACCTGGTTTGCACTAGGAGGATTGGCAGCTGCTGGCAAGACTTTTAGCACTTGTGCAGCCATGCGCCATGGGGTCAAATTTCTACTTACCATGCAGAGAGAGAACGGTGGTTGGGGAGAGAGTTATCTTTCATGTCCACAAAAGACATACATTCCTCTTGAAGGAAACCGATCCAATCTAGTACAAACTGCTTGGCCTATGATGGGTCTCATTCATGCGGGACTGGCAGAAAGAGACCCAACGTACACCTCTTCATCGTGCAGCAAAGAAATCACTGGAGTCTTCAAGAAGAACTGCATGCTACATTATGCAGCATATAGAAATATATACCCACTGTGGGCTCTGGCAGAATATTGCAATCGGGTTCCGTTGCCTTCCAAGGGCTGA

Protein Analysis

733

Amino Acids

83.76

Weight (kDa)

6.14

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 101 - 305 4.6e-36 Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C PF13243 401 - 724 6.7e-43 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1814
AccB1I GGYRCC 1 cut(s) 1814
AccB7I CCANNNNNTGG 1 cut(s) 1672
AccIII TCCGGA 1 cut(s) 707
AciI CCGC 6 cut(s) 137, 163, 313, 725, 1351, 2033
AclWI GGATC 8 cut(s) 89, 958, 971, 978, 1154, 1375, 1783, 1980
AcoI YGGCCR 2 cut(s) 343, 592
AcsI RAATTY 2 cut(s) 456, 1892
AcuI CTGAAG 2 cut(s) 135, 1176
AfaI GTAC 9 cut(s) 538, 918, 1349, 1502, 1662, 1743, 1816, 1998, 2060
AfeI AGCGCT 1 cut(s) 1496
AfiI CCNNNNNNNGG 9 cut(s) 104, 169, 587, 665, 1672, 1976, 2018, 2152, 2195
AflII CTTAAG 1 cut(s) 11
AflIII ACRYGT 2 cut(s) 508, 1639
AhdI GACNNNNNGTC 1 cut(s) 509
AhlI ACTAGT 1 cut(s) 1217
AjnI CCWGG 4 cut(s) 966, 1556, 1665, 1817
AjuI GAANNNNNNNTTGG 2 cut(s) 67, 99
AloI GAACNNNNNNTCC 2 cut(s) 209, 241
AluBI AGCT 9 cut(s) 10, 125, 542, 549, 733, 1235, 1406, 1690, 1844
AluI AGCT 9 cut(s) 10, 125, 542, 549, 733, 1235, 1406, 1690, 1844
Alw21I GWGCWC 2 cut(s) 1652, 1704
Alw26I GTCTC 2 cut(s) 2027, 2043
Alw44I GTGCAC 1 cut(s) 1648
AlwI GGATC 8 cut(s) 89, 958, 971, 978, 1154, 1375, 1783, 1980
AlwNI CAGNNNCTG 2 cut(s) 110, 1847
Aor13HI TCCGGA 1 cut(s) 707
Aor51HI AGCGCT 1 cut(s) 1496
AoxI GGCC 7 cut(s) 343, 350, 367, 592, 838, 1022, 2009
ApaLI GTGCAC 1 cut(s) 1648
ApeKI GCWGC 6 cut(s) 1574, 1841, 1844, 1871, 2076, 2126
ApoI RAATTY 2 cut(s) 456, 1892
ArsI GACNNNNNNTTYG 2 cut(s) 664, 696
Asp700I GAANNNNTTC 1 cut(s) 224
Asp718I GGTACC 1 cut(s) 1814
AspLEI GCGC 3 cut(s) 298, 1497, 1881
AspS9I GGNCC 6 cut(s) 368, 578, 705, 839, 1023, 1268
AsuHPI GGTGA 3 cut(s) 197, 1343, 1487
AvaII GGWCC 3 cut(s) 578, 705, 1268
AxyI CCTNAGG 1 cut(s) 212
BaeGI GKGCMC 1 cut(s) 1652
BalI TGGCCA 2 cut(s) 345, 594
BamHI GGATCC 1 cut(s) 963
BanI GGYRCC 1 cut(s) 1814
BanII GRGCYC 1 cut(s) 2158
BbsI GAAGAC 3 cut(s) 39, 137, 2089
Bbv12I GWGCWC 2 cut(s) 1652, 1704
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 6 cut(s) 1586, 1831, 1853, 1883, 2088, 2138
BciT130I CCWGG 4 cut(s) 968, 1558, 1667, 1819
BciVI GTATCC 1 cut(s) 1207
BclI TGATCA 2 cut(s) 634, 1038
BcoDI GTCTC 2 cut(s) 2027, 2043
BcuI ACTAGT 1 cut(s) 1217
BfaI CTAG 5 cut(s) 1218, 1245, 1281, 1829, 1994
BfmI CTRYAG 4 cut(s) 354, 784, 1419, 1529
BfoI RGCGCY 1 cut(s) 1498
BfrI CTTAAG 1 cut(s) 11
BfuI GTATCC 1 cut(s) 1207
BglI GCCNNNNNGGC 1 cut(s) 1151
BisI GCNGC 7 cut(s) 138, 1575, 1842, 1845, 1872, 2077, 2127
BlsI GCNGC 7 cut(s) 139, 1576, 1843, 1846, 1873, 2078, 2128
Bme1390I CCNGG 4 cut(s) 968, 1558, 1667, 1819
Bme18I GGWCC 3 cut(s) 578, 705, 1268
BmeRI GACNNNNNGTC 1 cut(s) 509
BmgT120I GGNCC 6 cut(s) 368, 578, 705, 839, 1023, 1268
BmiI GGNNCC 5 cut(s) 965, 1488, 1563, 1816, 2181
BmrFI CCNGG 4 cut(s) 968, 1558, 1667, 1819
BmrI ACTGGG 1 cut(s) 174
BmsI GCATC 7 cut(s) 283, 427, 454, 534, 772, 1195, 1446
BmuI ACTGGG 1 cut(s) 174
BpiI GAAGAC 3 cut(s) 39, 137, 2089
BpmI CTGGAG 3 cut(s) 228, 1649, 2112
Bpu10I CCTNAGC 3 cut(s) 126, 1491, 1698
BsaBI GATNNNNATC 1 cut(s) 1389
BsaI GGTCTC 2 cut(s) 2027, 2043
BsaJI CCNNGG 5 cut(s) 39, 959, 1557, 1882, 2193
BsaWI WCCGGW 1 cut(s) 707
BsaXI ACNNNNNCTCC 4 cut(s) 209, 226, 239, 256
Bsc4I CCNNNNNNNGG 9 cut(s) 104, 169, 587, 665, 1672, 1976, 2018, 2152, 2195
Bse118I RCCGGY 2 cut(s) 365, 1564
Bse1I ACTGG 4 cut(s) 180, 245, 2043, 2095
Bse21I CCTNAGG 1 cut(s) 212
Bse8I GATNNNNATC 1 cut(s) 1389
BseAI TCCGGA 1 cut(s) 707
BseBI CCWGG 4 cut(s) 968, 1558, 1667, 1819
BseDI CCNNGG 5 cut(s) 39, 959, 1557, 1882, 2193
BseGI GGATG 5 cut(s) 763, 798, 955, 1403, 1777
BseJI GATNNNNATC 1 cut(s) 1389
BseLI CCNNNNNNNGG 9 cut(s) 104, 169, 587, 665, 1672, 1976, 2018, 2152, 2195
BseMII CTCAG 8 cut(s) 117, 290, 336, 429, 559, 1322, 1482, 1689
BseNI ACTGG 4 cut(s) 180, 245, 2043, 2095
BseRI GAGGAG 2 cut(s) 28, 455
BseSI GKGCMC 1 cut(s) 1652
BseXI GCAGC 6 cut(s) 1586, 1831, 1853, 1883, 2088, 2138
BsgI GTGCAG 2 cut(s) 1890, 2095
BshFI GGCC 7 cut(s) 345, 352, 369, 594, 840, 1024, 2011
BshNI GGYRCC 1 cut(s) 1814
BsiHKAI GWGCWC 2 cut(s) 1652, 1704
BsiSI CCGG 4 cut(s) 366, 708, 1565, 1769
BslFI GGGAC 3 cut(s) 516, 1184, 2049
BslI CCNNNNNNNGG 9 cut(s) 104, 169, 587, 665, 1672, 1976, 2018, 2152, 2195
BsmAI GTCTC 2 cut(s) 2027, 2043
BsmFI GGGAC 3 cut(s) 516, 1184, 2049
BsnI GGCC 7 cut(s) 345, 352, 369, 594, 840, 1024, 2011
Bso31I GGTCTC 2 cut(s) 2027, 2043
Bsp1286I GDGCHC 3 cut(s) 1652, 1704, 2158
Bsp13I TCCGGA 1 cut(s) 707
Bsp1407I TGTACA 1 cut(s) 1741
Bsp19I CCATGG 1 cut(s) 1882
BspACI CCGC 6 cut(s) 137, 163, 313, 725, 1351, 2033
BspANI GGCC 7 cut(s) 345, 352, 369, 594, 840, 1024, 2011
BspCNI CTCAG 8 cut(s) 118, 291, 335, 430, 558, 1321, 1483, 1690
BspEI TCCGGA 1 cut(s) 707
BspLI GGNNCC 5 cut(s) 965, 1488, 1563, 1816, 2181
BspMAI CTGCAG 3 cut(s) 358, 1423, 1533
BspPI GGATC 8 cut(s) 89, 958, 971, 978, 1154, 1375, 1783, 1980
BspQI GCTCTTC 1 cut(s) 111
BspT107I GGYRCC 1 cut(s) 1814
BspTI CTTAAG 1 cut(s) 11
BspTNI GGTCTC 2 cut(s) 2027, 2043
BsrFI RCCGGY 2 cut(s) 365, 1564
BsrGI TGTACA 1 cut(s) 1741
BsrI ACTGG 4 cut(s) 180, 245, 2043, 2095
BssAI RCCGGY 2 cut(s) 365, 1564
BssECI CCNNGG 5 cut(s) 39, 959, 1557, 1882, 2193
BssT1I CCWWGG 3 cut(s) 959, 1882, 2193
Bst2UI CCWGG 4 cut(s) 968, 1558, 1667, 1819
Bst4CI ACNGT 4 cut(s) 428, 1593, 1922, 2151
Bst6I CTCTTC 3 cut(s) 111, 1014, 2071
BstAFI CTTAAG 1 cut(s) 11
BstAPI GCANNNNNTGC 2 cut(s) 110, 362
BstAUI TGTACA 1 cut(s) 1741
BstDEI CTNAG 9 cut(s) 126, 212, 299, 322, 438, 545, 1308, 1491, 1698
BstDSI CCRYGG 1 cut(s) 1882
BstEII GGTNACC 1 cut(s) 185
BstENI CCTNNNNNAGG 2 cut(s) 102, 1974
BstF5I GGATG 5 cut(s) 763, 798, 955, 1403, 1777
BstH2I RGCGCY 1 cut(s) 1498
BstHHI GCGC 3 cut(s) 298, 1497, 1881
BstMAI GTCTC 2 cut(s) 2027, 2043
BstMWI GCNNNNNNNGC 9 cut(s) 110, 332, 362, 1151, 1232, 1241, 1350, 1574, 2039
BstNI CCWGG 4 cut(s) 968, 1558, 1667, 1819
BstNSI RCATGY 5 cut(s) 512, 805, 1348, 1643, 2116
BstPI GGTNACC 1 cut(s) 185
BstSCI CCNGG 4 cut(s) 966, 1556, 1665, 1817
BstSFI CTRYAG 4 cut(s) 354, 784, 1419, 1529
BstSLI GKGCMC 1 cut(s) 1652
BstV1I GCAGC 6 cut(s) 1586, 1831, 1853, 1883, 2088, 2138
BstV2I GAAGAC 3 cut(s) 39, 137, 2089
BstX2I RGATCY 3 cut(s) 963, 970, 1159
BstXI CCANNNNNNTGG 1 cut(s) 735
BstYI RGATCY 3 cut(s) 963, 970, 1159
Bsu36I CCTNAGG 1 cut(s) 212
BsuI GTATCC 1 cut(s) 1207
BsuRI GGCC 7 cut(s) 345, 352, 369, 594, 840, 1024, 2011
BtgI CCRYGG 1 cut(s) 1882
BtgZI GCGATG 2 cut(s) 354, 431
BtsCI GGATG 5 cut(s) 763, 798, 955, 1403, 1777
BtsI GCAGTG 1 cut(s) 1416
BtsIMutI CAGTG 6 cut(s) 187, 433, 1254, 1416, 2088, 2147
CaiI CAGNNNCTG 2 cut(s) 110, 1847
CfoI GCGC 3 cut(s) 298, 1497, 1881
Cfr10I RCCGGY 2 cut(s) 365, 1564
Cfr13I GGNCC 6 cut(s) 368, 578, 705, 839, 1023, 1268
CseI GACGC 1 cut(s) 110
CsiI ACCWGGT 1 cut(s) 1817
Csp6I GTAC 9 cut(s) 537, 917, 1348, 1501, 1661, 1742, 1815, 1997, 2059
CspCI CAANNNNNGTGG 2 cut(s) 1525, 1560
CviQI GTAC 9 cut(s) 537, 917, 1348, 1501, 1661, 1742, 1815, 1997, 2059
DdeI CTNAG 9 cut(s) 126, 212, 299, 322, 438, 545, 1308, 1491, 1698
DraI TTTAAA 1 cut(s) 1431
DriI GACNNNNNGTC 1 cut(s) 509
EaeI YGGCCR 2 cut(s) 343, 592
Eam1104I CTCTTC 3 cut(s) 111, 1014, 2071
Eam1105I GACNNNNNGTC 1 cut(s) 509
EarI CTCTTC 3 cut(s) 111, 1014, 2071
Eco130I CCWWGG 3 cut(s) 959, 1882, 2193
Eco24I GRGCYC 1 cut(s) 2158
Eco31I GGTCTC 2 cut(s) 2027, 2043
Eco47I GGWCC 3 cut(s) 578, 705, 1268
Eco47III AGCGCT 1 cut(s) 1496
Eco57I CTGAAG 2 cut(s) 135, 1176
Eco81I CCTNAGG 1 cut(s) 212
Eco91I GGTNACC 1 cut(s) 185
EcoNI CCTNNNNNAGG 2 cut(s) 102, 1974
EcoO109I RGGNCCY 1 cut(s) 578
EcoO65I GGTNACC 1 cut(s) 185
EcoRII CCWGG 4 cut(s) 966, 1556, 1665, 1817
EcoT14I CCWWGG 3 cut(s) 959, 1882, 2193
EcoT38I GRGCYC 1 cut(s) 2158
ErhI CCWWGG 3 cut(s) 959, 1882, 2193
FalI AAGNNNNNCTT 4 cut(s) 67, 99, 1224, 1256
FaqI GGGAC 3 cut(s) 516, 1184, 2049
FauI CCCGC 2 cut(s) 732, 2026
FauNDI CATATG 1 cut(s) 1810
FbaI TGATCA 2 cut(s) 634, 1038
Fnu4HI GCNGC 7 cut(s) 138, 1575, 1842, 1845, 1872, 2077, 2127
FokI GGATG 5 cut(s) 750, 805, 942, 1410, 1784
FriOI GRGCYC 1 cut(s) 2158
Fsp4HI GCNGC 7 cut(s) 138, 1575, 1842, 1845, 1872, 2077, 2127
FspBI CTAG 5 cut(s) 1218, 1245, 1281, 1829, 1994
GlaI GCGC 3 cut(s) 297, 1496, 1880
GluI GCNGC 7 cut(s) 138, 1575, 1842, 1845, 1872, 2077, 2127
GsuI CTGGAG 3 cut(s) 228, 1649, 2112
HaeII RGCGCY 1 cut(s) 1498
HaeIII GGCC 7 cut(s) 345, 352, 369, 594, 840, 1024, 2011
HapII CCGG 4 cut(s) 366, 708, 1565, 1769
HgaI GACGC 1 cut(s) 110
HhaI GCGC 3 cut(s) 298, 1497, 1881
Hin6I GCGC 3 cut(s) 296, 1495, 1879
HinP1I GCGC 3 cut(s) 296, 1495, 1879
HindIII AAGCTT 3 cut(s) 8, 1233, 1404
HinfI GANTC 5 cut(s) 35, 628, 1101, 1505, 2094
HpaII CCGG 4 cut(s) 366, 708, 1565, 1769
HphI GGTGA 3 cut(s) 197, 1343, 1487
Hpy166II GTNNAC 7 cut(s) 799, 1093, 1374, 1650, 1744, 1952, 2061
Hpy188I TCNGA 7 cut(s) 439, 483, 1043, 1384, 1411, 1465, 1602
Hpy188III TCNNGA 7 cut(s) 98, 632, 708, 1281, 1388, 1973, 2101
Hpy8I GTNNAC 7 cut(s) 799, 1093, 1374, 1650, 1744, 1952, 2061
HpyCH4III ACNGT 4 cut(s) 428, 1593, 1922, 2151
HpyCH4IV ACGT 1 cut(s) 2057
HpyF10VI GCNNNNNNNGC 9 cut(s) 110, 332, 362, 1151, 1232, 1241, 1350, 1574, 2039
HpyF3I CTNAG 9 cut(s) 126, 212, 299, 322, 438, 545, 1308, 1491, 1698
HpySE526I ACGT 1 cut(s) 2057
HspAI GCGC 3 cut(s) 296, 1495, 1879
Kpn2I TCCGGA 1 cut(s) 707
KpnI GGTACC 1 cut(s) 1818
KroI GCCGGC 1 cut(s) 365
KroNI GCCGGC 1 cut(s) 367
Ksp22I TGATCA 2 cut(s) 634, 1038
LguI GCTCTTC 1 cut(s) 111
LmnI GCTCC 2 cut(s) 442, 1486
Lsp1109I GCAGC 6 cut(s) 1586, 1831, 1853, 1883, 2088, 2138
LweI GCATC 7 cut(s) 283, 427, 454, 534, 772, 1195, 1446
MabI ACCWGGT 1 cut(s) 1817
MaeI CTAG 5 cut(s) 1218, 1245, 1281, 1829, 1994
MaeII ACGT 1 cut(s) 2057
MaeIII GTNAC 4 cut(s) 185, 646, 1060, 1331
MfeI CAATTG 2 cut(s) 863, 904
MflI RGATCY 3 cut(s) 963, 970, 1159
MhlI GDGCHC 3 cut(s) 1652, 1704, 2158
MlsI TGGCCA 2 cut(s) 345, 594
MluCI AATT 9 cut(s) 237, 456, 700, 843, 863, 904, 1263, 1607, 1892
MluNI TGGCCA 2 cut(s) 345, 594
MlyI GAGTC 2 cut(s) 29, 2103
MmeI TCCRAC 1 cut(s) 1625
Mox20I TGGCCA 2 cut(s) 345, 594
MroI TCCGGA 1 cut(s) 707
MroNI GCCGGC 1 cut(s) 365
MroXI GAANNNNTTC 1 cut(s) 224
MscI TGGCCA 2 cut(s) 345, 594
MseI TTAA 7 cut(s) 12, 174, 423, 699, 1430, 1595, 1683
MslI CAYNNNNRTG 8 cut(s) 401, 483, 557, 642, 806, 927, 1109, 1638
Msp20I TGGCCA 2 cut(s) 345, 594
MspA1I CMGCKG 1 cut(s) 1844
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 4 cut(s) 366, 708, 1565, 1769
MspR9I CCNGG 4 cut(s) 968, 1558, 1667, 1819
MunI CAATTG 2 cut(s) 863, 904
MvaI CCWGG 4 cut(s) 968, 1558, 1667, 1819
MwoI GCNNNNNNNGC 9 cut(s) 110, 332, 362, 1151, 1232, 1241, 1350, 1574, 2039
NaeI GCCGGC 1 cut(s) 367
NcoI CCATGG 1 cut(s) 1882
NdeI CATATG 1 cut(s) 1810
NgoMIV GCCGGC 1 cut(s) 365
NlaIV GGNNCC 5 cut(s) 965, 1488, 1563, 1816, 2181
NmeAIII GCCGAG 1 cut(s) 20
NmuCI GTSAC 4 cut(s) 185, 646, 1060, 1331
NspI RCATGY 5 cut(s) 512, 805, 1348, 1643, 2116
PaeI GCATGC 1 cut(s) 2116
PciI ACATGT 2 cut(s) 508, 1639
PciSI GCTCTTC 1 cut(s) 111
PdiI GCCGGC 1 cut(s) 367
PdmI GAANNNNTTC 1 cut(s) 224
PfeI GAWTC 3 cut(s) 628, 1101, 1505
PflMI CCANNNNNTGG 1 cut(s) 1672
PfoI TCCNGGA 1 cut(s) 966
PkrI GCNGC 7 cut(s) 139, 1576, 1843, 1846, 1873, 2078, 2128
PleI GAGTC 2 cut(s) 29, 2102
PpsI GAGTC 2 cut(s) 29, 2102
PpuMI RGGWCCY 1 cut(s) 578
PscI ACATGT 2 cut(s) 508, 1639
Psp5II RGGWCCY 1 cut(s) 578
Psp6I CCWGG 4 cut(s) 966, 1556, 1665, 1817
PspEI GGTNACC 1 cut(s) 185
PspGI CCWGG 4 cut(s) 966, 1556, 1665, 1817
PspN4I GGNNCC 5 cut(s) 965, 1488, 1563, 1816, 2181
PspPI GGNCC 6 cut(s) 368, 578, 705, 839, 1023, 1268
PspPPI RGGWCCY 1 cut(s) 578
PstI CTGCAG 3 cut(s) 358, 1423, 1533
PstNI CAGNNNCTG 2 cut(s) 110, 1847
PsuI RGATCY 3 cut(s) 963, 970, 1159
PvuII CAGCTG 1 cut(s) 1844
RsaI GTAC 9 cut(s) 538, 918, 1349, 1502, 1662, 1743, 1816, 1998, 2060
RsaNI GTAC 9 cut(s) 537, 917, 1348, 1501, 1661, 1742, 1815, 1997, 2059
RseI CAYNNNNRTG 8 cut(s) 401, 483, 557, 642, 806, 927, 1109, 1638
SapI GCTCTTC 1 cut(s) 111
SaqAI TTAA 7 cut(s) 12, 174, 423, 699, 1430, 1595, 1683
SatI GCNGC 7 cut(s) 138, 1575, 1842, 1845, 1872, 2077, 2127
Sau96I GGNCC 6 cut(s) 368, 578, 705, 839, 1023, 1268
SchI GAGTC 2 cut(s) 29, 2103
ScrFI CCNGG 4 cut(s) 968, 1558, 1667, 1819
SduI GDGCHC 3 cut(s) 1652, 1704, 2158
SexAI ACCWGGT 1 cut(s) 1817
SfaNI GCATC 7 cut(s) 283, 427, 454, 534, 772, 1195, 1446
SfcI CTRYAG 4 cut(s) 354, 784, 1419, 1529
SinI GGWCC 3 cut(s) 578, 705, 1268
SmiMI CAYNNNNRTG 8 cut(s) 401, 483, 557, 642, 806, 927, 1109, 1638
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
SpeI ACTAGT 1 cut(s) 1217
SphI GCATGC 1 cut(s) 2116
Sse9I AATT 9 cut(s) 237, 456, 700, 843, 863, 904, 1263, 1607, 1892
SsiI CCGC 6 cut(s) 137, 163, 313, 725, 1351, 2033
SspI AATATT 2 cut(s) 1724, 2168
SspMI CTAG 5 cut(s) 1218, 1245, 1281, 1829, 1994
StyD4I CCNGG 4 cut(s) 966, 1556, 1665, 1817
StyI CCWWGG 3 cut(s) 959, 1882, 2193
TaaI ACNGT 4 cut(s) 428, 1593, 1922, 2151
TaiI ACGT 1 cut(s) 2060
TaqI TCGA 4 cut(s) 513, 683, 1451, 1614
TasI AATT 9 cut(s) 237, 456, 700, 843, 863, 904, 1263, 1607, 1892
TatI WGTACW 4 cut(s) 536, 1660, 1741, 1996
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 3 cut(s) 628, 1101, 1505
Tru1I TTAA 7 cut(s) 12, 174, 423, 699, 1430, 1595, 1683
Tru9I TTAA 7 cut(s) 12, 174, 423, 699, 1430, 1595, 1683
TscAI CASTG 6 cut(s) 187, 433, 1261, 1423, 2095, 2154
TseFI GTSAC 4 cut(s) 185, 646, 1060, 1331
TseI GCWGC 6 cut(s) 1574, 1841, 1844, 1871, 2076, 2126
Tsp45I GTSAC 4 cut(s) 185, 646, 1060, 1331
TspGWI ACGGA 1 cut(s) 2172
TspRI CASTG 6 cut(s) 187, 433, 1261, 1423, 2095, 2154
Van91I CCANNNNNTGG 1 cut(s) 1672
Vha464I CTTAAG 1 cut(s) 11
VneI GTGCAC 1 cut(s) 1648
VpaK11BI GGWCC 3 cut(s) 578, 705, 1268
XagI CCTNNNNNAGG 2 cut(s) 102, 1974
XapI RAATTY 2 cut(s) 456, 1892
XbaI TCTAGA 1 cut(s) 1280
XceI RCATGY 5 cut(s) 512, 805, 1348, 1643, 2116
XcmI CCANNNNNNNNNTGG 1 cut(s) 774
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 5 cut(s) 1218, 1245, 1281, 1829, 1994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.