Prupe.3G025900_v2.0.a1

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000173
Physical Location & Seq
Reverse (-)
1902154 .. 1908533
6380 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G025900.1

Sequence Viewer

Length: 2280 bp
ATGTGGAGGATTAAGTATGGAGAGGGGGCAAATGACCCCTTGTTGTTCAGCACAAACAACTTCCATGGAAGGCAGACATGGGAGTTTGACCCAGATGCAGGTACCCCTGAAGAGAGAGCAGAGGTTGAAGAAGCTCGTGAAAATTTCTACAGAAACCGCTTCAAGGTTCAGCCCAGCAGTGATCTCCTCTGGCGTTTTCAGATGCTAAGAGAGAGAAACTTCAAACAAGAAATTCCACCAGTAAGAATTGGGGAGGGTGAGGAAATCACATATGATCAGGCCACCGCTGCATACAGGAGGGCTGCGACCTTTTGGAATGCCTTGCAATCACCTCATGGACATTGGCCTGCTGAAAATGCTGGCCCAAACTTTTACTTTCCACCCCTGGTCATGGCTGCATACATTCCTGGATATCTTAATGTTATTTTCACACCTGAGCATAAGAAGGAAATCTTGCGTTATACATACAACCATCAGAATGAAGATGGTGGGTGGGGATTACACATAGCAGGGCCTAGTATGATGTTCACCACATGTCTTAACTACTGTATGATGCGTATACTCGGAGATGGCCCCGATGGCGGTCGTGACAACGCATGCGAAAGGGCACGAAAGTGGATTCTTGACCGTGGGGGTGCATACTATTCTGCATCATGGGGAAAAACTTGGATGGCGGTCCTTGGTGTGTACGATTGGGAAGGCAGCAACCCCATGCCCCCGGAGTTTTGGACTTACCCTACTCTGCTTCCTTTTCATCCATCAAAAATGTTCTGCTACTGCAGGTTGACTTACCTACCTATGTCTTACTTTTATGCCACAAGATTTGTTGGTCCAATCACTCCTCTTGTTGAAGAATTGAGACAAGAAATTTACTGTGAACCGTACAGCGAAATTAACTGGAGTACAGTGCGCCATTCGTGTGCAAAGGAAGATAACTACTATCCCCATGGCAGGGTTCAACGTTTTATGTGGGACAGTCTTTACACAGTTGCTGAGCCTCTTCTTAAGATCTGGCCCTTCAAGAAGATCAGAGACAATGCTATTCAATTTACAATTGACCAAATTCATTACGAAGATGAGAACAGTCGCTATATTACGATCGGATGCGTGGAGAAGCCATTGATGATGCTTGCTTGCTGGGCCGAGGATCCTAGTGGAGAAGCTTTTAAGAAGCACATTCCTAGAGTTACAGATTATATATGGCTTGGAGAGGATGGAATCAAGATGCAGAGTTTTGGCAGCCAGTCATGGGACTGTGCTCTTGTAATTCAAGCTTTGCTTGCTGGGAATCTCAATGCTGAAATGGGACCTGTACTTAAGAAAGCACACGAATTCCTGAAGATATCTCAGGTGAGGATCAATACTTCCGGTGACTACTTAGCTCATTTCCGTCACATTTCTAAGGGAGCATGGACATTCTCTGATCGGGATCACGGATGGCAAGTTTCTGATTGTACTGCAGAGGCATTGAGGTGTTGCTGCCTGTTTGCAAATATGTCCCCAGAAGTTGTTGGTGAGCCAATGGAAGCTGAGTGTATGTATGATGCTGTCAATGTCATAATGTCTCTTCAGAGTCCAAACGGTGGTGTATCAGCCTGGGAGCCAACAGGAGCACCAAAATGGTTGGAGTGGCTCAACCCTGTGGAATTTCTCGAGGACCTTGTCATCGAATACGAGTACATCGAGTGCACTTCATCTTCAATCCAGGCCTTAATTTTGTTCAGGAAGTTGTACCCTGGGCACAGAAGGAAAGAGATCAACAATTTCATCACAAGGGCTGCAGACTACATTGAAGACATACAATATCCTGATGGCTCATGGTATGGAAACTGGGGAATCTGCTTTGTGTATGGTACCTGGTTTGCAATCAAAGGGTTGGAGGCTGCAGGCAGAACATACAACAATTGCGAGGCAGTACGCAAAGGTGTTGACTTTTTGCTCAAAACTCAAAGGGAAGACGGTGGTTGGGGAGAGCACTACACCTCATGCACAAACAAGAAATATACAGCTCAAGACAGTACAAATTTGGTCCAAACTGCACTTGGATTGATGGGTCTGATTCATGGCCGGCAGGCTGAGAGAGATCCAACTCCCATTCACCGTGCCGCAAGGGTGTTGATGAACGGTCAATTGGACGATGGTGATTTCCCCCAACAGGAACTGATGGGAGTTTTTATGAGGAATGCCATGTTGCACTATGCAGCATATAGGAATATCTTCCCATTGTGGGCTCTCGGAGAATACCGTACACTGGTTCAGTTGCCTACCAAAAGGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

760

Amino Acids

87.61

Weight (kDa)

5.69

Isoelectric Point (pI)

45.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 89, 771
Acc65I GGTACC 2 cut(s) 101, 1853
AccB1I GGYRCC 2 cut(s) 101, 1853
AccB7I CCANNNNNTGG 1 cut(s) 1583
AccI GTMKAC 1 cut(s) 559
AciI CCGC 5 cut(s) 157, 285, 582, 674, 2106
AclI AACGTT 1 cut(s) 961
AclWI GGATC 5 cut(s) 1142, 1155, 1364, 1437, 2078
AcoI YGGCCR 1 cut(s) 2065
AcsI RAATTY 7 cut(s) 142, 231, 867, 1062, 1331, 1646, 2023
AcuI CTGAAG 3 cut(s) 129, 1358, 1553
AflII CTTAAG 2 cut(s) 1004, 1316
AflIII ACRYGT 1 cut(s) 533
AjnI CCWGG 6 cut(s) 384, 406, 1595, 1704, 1735, 1856
AjuI GAANNNNNNNTTGG 2 cut(s) 2114, 2146
AleI CACNNNNGTG 1 cut(s) 613
AluBI AGCT 6 cut(s) 134, 1163, 1274, 1382, 1529, 2009
AluI AGCT 6 cut(s) 134, 1163, 1274, 1382, 1529, 2009
Alw21I GWGCWC 4 cut(s) 1261, 1615, 1691, 1977
Alw26I GTCTC 3 cut(s) 853, 1026, 1569
Alw44I GTGCAC 1 cut(s) 1687
AlwI GGATC 5 cut(s) 1142, 1155, 1364, 1437, 2078
AlwNI CAGNNNCTG 2 cut(s) 992, 2161
Ama87I CYCGRG 1 cut(s) 1652
AoxI GGCC 9 cut(s) 279, 344, 361, 512, 571, 1013, 1140, 1707, 2065
ApaLI GTGCAC 1 cut(s) 1687
ApeKI GCWGC 9 cut(s) 287, 302, 395, 702, 1239, 1479, 1778, 1883, 2201
ApoI RAATTY 7 cut(s) 142, 231, 867, 1062, 1331, 1646, 2023
Asp700I GAANNNNTTC 1 cut(s) 2216
Asp718I GGTACC 2 cut(s) 101, 1853
AspLEI GCGC 1 cut(s) 912
AsuC2I CCSGG 1 cut(s) 719
AsuHPI GGTGA 8 cut(s) 269, 321, 520, 1363, 1382, 1526, 2090, 2153
AvaI CYCGRG 1 cut(s) 1652
AvaII GGWCC 5 cut(s) 676, 830, 1307, 1657, 2029
BaeGI GKGCMC 3 cut(s) 610, 1691, 1743
BamHI GGATCC 1 cut(s) 1147
BanI GGYRCC 2 cut(s) 101, 1853
BanII GRGCYC 1 cut(s) 2233
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 2 cut(s) 1800, 1962
Bbv12I GWGCWC 4 cut(s) 1261, 1615, 1691, 1977
BbvI GCAGC 9 cut(s) 274, 289, 382, 714, 1251, 1466, 1765, 1870, 2213
BciT130I CCWGG 6 cut(s) 386, 408, 1597, 1706, 1737, 1858
BclI TGATCA 1 cut(s) 274
BcnI CCSGG 1 cut(s) 719
BcoDI GTCTC 3 cut(s) 853, 1026, 1569
BfaI CTAG 3 cut(s) 516, 1152, 1182
BfmI CTRYAG 5 cut(s) 148, 778, 1458, 1779, 1884
BfrI CTTAAG 2 cut(s) 1004, 1316
BfuAI ACCTGC 2 cut(s) 89, 771
BglI GCCNNNNNGGC 1 cut(s) 579
BglII AGATCT 1 cut(s) 1008
BlpI GCTNAGC 1 cut(s) 993
Bme1390I CCNGG 7 cut(s) 386, 408, 719, 1597, 1706, 1737, 1858
Bme18I GGWCC 5 cut(s) 676, 830, 1307, 1657, 2029
BmeT110I CYCGRG 1 cut(s) 1652
BmiI GGNNCC 6 cut(s) 103, 574, 1149, 1308, 1602, 1855
BmrFI CCNGG 7 cut(s) 386, 408, 719, 1597, 1706, 1737, 1858
BmrI ACTGGG 1 cut(s) 1840
BmsI GCATC 8 cut(s) 85, 192, 543, 659, 1094, 1116, 1215, 1534
BmuI ACTGGG 1 cut(s) 1840
BpiI GAAGAC 2 cut(s) 1800, 1962
BpmI CTGGAG 1 cut(s) 919
Bpu10I CCTNAGC 1 cut(s) 435
Bpu1102I GCTNAGC 1 cut(s) 993
BpuEI CTTGAG 1 cut(s) 1995
BpuMI CCSGG 1 cut(s) 719
BsaBI GATNNNNATC 1 cut(s) 1428
BsaWI WCCGGW 1 cut(s) 1367
Bse118I RCCGGY 1 cut(s) 2067
Bse1I ACTGG 5 cut(s) 239, 902, 1243, 1835, 2256
Bse8I GATNNNNATC 1 cut(s) 1428
BseBI CCWGG 6 cut(s) 386, 408, 1597, 1706, 1737, 1858
BseGI GGATG 5 cut(s) 675, 754, 1109, 1219, 1442
BseJI GATNNNNATC 1 cut(s) 1428
BseMII CTCAG 5 cut(s) 426, 984, 1361, 1521, 2067
BseNI ACTGG 5 cut(s) 239, 902, 1243, 1835, 2256
BseRI GAGGAG 2 cut(s) 176, 831
BseSI GKGCMC 3 cut(s) 610, 1691, 1743
BseXI GCAGC 9 cut(s) 274, 289, 382, 714, 1251, 1466, 1765, 1870, 2213
BseYI CCCAGC 3 cut(s) 173, 1137, 1283
BsgI GTGCAG 1 cut(s) 2022
Bsh1285I CGRYCG 2 cut(s) 586, 1101
BshFI GGCC 9 cut(s) 281, 346, 363, 514, 573, 1015, 1142, 1709, 2067
BshNI GGYRCC 2 cut(s) 101, 1853
BsiEI CGRYCG 2 cut(s) 586, 1101
BsiHKAI GWGCWC 4 cut(s) 1261, 1615, 1691, 1977
BsiHKCI CYCGRG 1 cut(s) 1652
BsiSI CCGG 3 cut(s) 719, 1368, 2068
BslFI GGGAC 4 cut(s) 986, 1265, 1320, 1483
BsmAI GTCTC 3 cut(s) 853, 1026, 1569
BsmFI GGGAC 4 cut(s) 986, 1265, 1320, 1483
BsmI GAATGC 2 cut(s) 322, 2188
BsnI GGCC 9 cut(s) 281, 346, 363, 514, 573, 1015, 1142, 1709, 2067
BsoBI CYCGRG 1 cut(s) 1652
Bsp1286I GDGCHC 7 cut(s) 610, 1261, 1615, 1691, 1743, 1977, 2233
Bsp1720I GCTNAGC 1 cut(s) 993
Bsp19I CCATGG 2 cut(s) 64, 946
BspACI CCGC 5 cut(s) 157, 285, 582, 674, 2106
BspANI GGCC 9 cut(s) 281, 346, 363, 514, 573, 1015, 1142, 1709, 2067
BspCNI CTCAG 5 cut(s) 427, 985, 1360, 1522, 2068
BspLI GGNNCC 6 cut(s) 103, 574, 1149, 1308, 1602, 1855
BspMAI CTGCAG 4 cut(s) 782, 1462, 1783, 1888
BspMI ACCTGC 2 cut(s) 89, 771
BspPI GGATC 5 cut(s) 1142, 1155, 1364, 1437, 2078
BspT107I GGYRCC 2 cut(s) 101, 1853
BspTI CTTAAG 2 cut(s) 1004, 1316
BsrFI RCCGGY 1 cut(s) 2067
BsrI ACTGG 5 cut(s) 239, 902, 1243, 1835, 2256
BssAI RCCGGY 1 cut(s) 2067
BssNAI GTATAC 1 cut(s) 560
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 3 cut(s) 64, 679, 946
Bst1107I GTATAC 1 cut(s) 560
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 6 cut(s) 386, 408, 1597, 1706, 1737, 1858
Bst6I CTCTTC 3 cut(s) 105, 1005, 1572
BstAFI CTTAAG 2 cut(s) 1004, 1316
BstC8I GCNNGC 9 cut(s) 348, 361, 598, 1131, 1135, 1281, 1888, 2069, 2073
BstDEI CTNAG 8 cut(s) 206, 435, 993, 1347, 1378, 1401, 1530, 2076
BstDSI CCRYGG 3 cut(s) 64, 628, 946
BstF5I GGATG 5 cut(s) 675, 754, 1109, 1219, 1442
BstHHI GCGC 1 cut(s) 912
BstMAI GTCTC 3 cut(s) 853, 1026, 1569
BstMCI CGRYCG 2 cut(s) 586, 1101
BstMWI GCNNNNNNNGC 5 cut(s) 287, 356, 579, 1139, 1280
BstNI CCWGG 6 cut(s) 386, 408, 1597, 1706, 1737, 1858
BstNSI RCATGY 2 cut(s) 537, 600
BstSCI CCNGG 7 cut(s) 384, 406, 717, 1595, 1704, 1735, 1856
BstSFI CTRYAG 5 cut(s) 148, 778, 1458, 1779, 1884
BstSLI GKGCMC 3 cut(s) 610, 1691, 1743
BstV1I GCAGC 9 cut(s) 274, 289, 382, 714, 1251, 1466, 1765, 1870, 2213
BstV2I GAAGAC 2 cut(s) 1800, 1962
BstX2I RGATCY 3 cut(s) 1008, 1147, 2083
BstYI RGATCY 3 cut(s) 1008, 1147, 2083
BstZ17I GTATAC 1 cut(s) 560
BsuRI GGCC 9 cut(s) 281, 346, 363, 514, 573, 1015, 1142, 1709, 2067
BtgI CCRYGG 3 cut(s) 64, 628, 946
BtsCI GGATG 5 cut(s) 675, 754, 1109, 1219, 1442
BtsI GCAGTG 1 cut(s) 184
BtsIMutI CAGTG 3 cut(s) 184, 912, 2249
BveI ACCTGC 2 cut(s) 89, 771
Cac8I GCNNGC 9 cut(s) 348, 361, 598, 1131, 1135, 1281, 1888, 2069, 2073
CaiI CAGNNNCTG 2 cut(s) 992, 2161
CfoI GCGC 1 cut(s) 912
Cfr10I RCCGGY 1 cut(s) 2067
CsiI ACCWGGT 1 cut(s) 1856
CspCI CAANNNNNGTGG 2 cut(s) 805, 840
DdeI CTNAG 8 cut(s) 206, 435, 993, 1347, 1378, 1401, 1530, 2076
EaeI YGGCCR 1 cut(s) 2065
Eam1104I CTCTTC 3 cut(s) 105, 1005, 1572
EarI CTCTTC 3 cut(s) 105, 1005, 1572
Eco130I CCWWGG 3 cut(s) 64, 679, 946
Eco147I AGGCCT 1 cut(s) 1709
Eco24I GRGCYC 1 cut(s) 2233
Eco32I GATATC 2 cut(s) 413, 1344
Eco47I GGWCC 5 cut(s) 676, 830, 1307, 1657, 2029
Eco57I CTGAAG 3 cut(s) 129, 1358, 1553
Eco88I CYCGRG 1 cut(s) 1652
EcoO109I RGGNCCY 3 cut(s) 512, 1307, 1657
EcoRI GAATTC 1 cut(s) 1331
EcoRII CCWGG 6 cut(s) 384, 406, 1595, 1704, 1735, 1856
EcoRV GATATC 2 cut(s) 413, 1344
EcoT14I CCWWGG 3 cut(s) 64, 679, 946
EcoT38I GRGCYC 1 cut(s) 2233
ErhI CCWWGG 3 cut(s) 64, 679, 946
FalI AAGNNNNNCTT 4 cut(s) 437, 469, 1263, 1295
FaqI GGGAC 4 cut(s) 986, 1265, 1320, 1483
FauNDI CATATG 1 cut(s) 271
FbaI TGATCA 1 cut(s) 274
FblI GTMKAC 1 cut(s) 559
FokI GGATG 5 cut(s) 682, 741, 1116, 1226, 1449
FriOI GRGCYC 1 cut(s) 2233
FspBI CTAG 3 cut(s) 516, 1152, 1182
GlaI GCGC 1 cut(s) 911
GsaI CCCAGC 3 cut(s) 177, 1141, 1287
GsuI CTGGAG 1 cut(s) 919
HaeIII GGCC 9 cut(s) 281, 346, 363, 514, 573, 1015, 1142, 1709, 2067
HapII CCGG 3 cut(s) 719, 1368, 2068
HhaI GCGC 1 cut(s) 912
Hin6I GCGC 1 cut(s) 910
HinP1I GCGC 1 cut(s) 910
HincII GTYRAC 2 cut(s) 786, 1930
HindII GTYRAC 2 cut(s) 786, 1930
HindIII AAGCTT 2 cut(s) 1161, 1272
HinfI GANTC 6 cut(s) 619, 1218, 1288, 1573, 1836, 2059
HpaII CCGG 3 cut(s) 719, 1368, 2068
HphI GGTGA 8 cut(s) 269, 321, 520, 1363, 1382, 1526, 2090, 2153
Hpy166II GTNNAC 8 cut(s) 528, 560, 688, 786, 878, 1689, 1930, 2249
Hpy8I GTNNAC 8 cut(s) 528, 560, 688, 786, 878, 1689, 1930, 2249
HpyAV CCTTC 5 cut(s) 63, 439, 692, 1027, 1740
HpyCH4IV ACGT 1 cut(s) 961
HpyF10VI GCNNNNNNNGC 5 cut(s) 287, 356, 579, 1139, 1280
HpyF3I CTNAG 8 cut(s) 206, 435, 993, 1347, 1378, 1401, 1530, 2076
HpySE526I ACGT 1 cut(s) 961
HspAI GCGC 1 cut(s) 910
KpnI GGTACC 2 cut(s) 105, 1857
KroI GCCGGC 1 cut(s) 2067
KroNI GCCGGC 1 cut(s) 2069
Ksp22I TGATCA 1 cut(s) 274
LmnI GCTCC 3 cut(s) 1406, 1600, 1610
Lsp1109I GCAGC 9 cut(s) 274, 289, 382, 714, 1251, 1466, 1765, 1870, 2213
LweI GCATC 8 cut(s) 85, 192, 543, 659, 1094, 1116, 1215, 1534
MabI ACCWGGT 1 cut(s) 1856
MaeI CTAG 3 cut(s) 516, 1152, 1182
MaeII ACGT 1 cut(s) 961
MaeIII GTNAC 4 cut(s) 587, 1186, 1370, 1391
MfeI CAATTG 3 cut(s) 1053, 1903, 2129
MflI RGATCY 3 cut(s) 1008, 1147, 2083
MhlI GDGCHC 7 cut(s) 610, 1261, 1615, 1691, 1743, 1977, 2233
MlyI GAGTC 1 cut(s) 1582
MmeI TCCRAC 3 cut(s) 1605, 1857, 2111
MroNI GCCGGC 1 cut(s) 2067
MroXI GAANNNNTTC 1 cut(s) 2216
MseI TTAA 8 cut(s) 12, 417, 540, 894, 1005, 1167, 1317, 1712
MslI CAYNNNNRTG 5 cut(s) 477, 613, 918, 1471, 1618
MspA1I CMGCKG 1 cut(s) 287
MspCI CTTAAG 2 cut(s) 1004, 1316
MspI CCGG 3 cut(s) 719, 1368, 2068
MspR9I CCNGG 7 cut(s) 386, 408, 719, 1597, 1706, 1737, 1858
MunI CAATTG 3 cut(s) 1053, 1903, 2129
Mva1269I GAATGC 2 cut(s) 322, 2188
MvaI CCWGG 6 cut(s) 386, 408, 1597, 1706, 1737, 1858
MwoI GCNNNNNNNGC 5 cut(s) 287, 356, 579, 1139, 1280
NaeI GCCGGC 1 cut(s) 2069
NciI CCSGG 1 cut(s) 719
NcoI CCATGG 2 cut(s) 64, 946
NdeI CATATG 1 cut(s) 271
NgoMIV GCCGGC 1 cut(s) 2067
NlaIV GGNNCC 6 cut(s) 103, 574, 1149, 1308, 1602, 1855
NmeAIII GCCGAG 1 cut(s) 1168
NmuCI GTSAC 3 cut(s) 587, 1370, 1391
NspI RCATGY 2 cut(s) 537, 600
OliI CACNNNNGTG 1 cut(s) 613
PaeI GCATGC 1 cut(s) 600
PaeR7I CTCGAG 1 cut(s) 1652
PasI CCCWGGG 1 cut(s) 1736
PceI AGGCCT 1 cut(s) 1709
PciI ACATGT 1 cut(s) 533
PcsI WCGNNNNNNNCGW 1 cut(s) 1680
PctI GAATGC 2 cut(s) 322, 2188
PdiI GCCGGC 1 cut(s) 2069
PdmI GAANNNNTTC 1 cut(s) 2216
PfeI GAWTC 5 cut(s) 619, 1218, 1288, 1836, 2059
PflFI GACNNNGTC 1 cut(s) 1661
PflMI CCANNNNNTGG 1 cut(s) 1583
PfoI TCCNGGA 1 cut(s) 406
Ple19I CGATCG 1 cut(s) 1101
PleI GAGTC 1 cut(s) 1581
PpsI GAGTC 1 cut(s) 1581
PpuMI RGGWCCY 2 cut(s) 1307, 1657
PscI ACATGT 1 cut(s) 533
Psp1406I AACGTT 1 cut(s) 961
Psp5II RGGWCCY 2 cut(s) 1307, 1657
Psp6I CCWGG 6 cut(s) 384, 406, 1595, 1704, 1735, 1856
PspFI CCCAGC 3 cut(s) 173, 1137, 1283
PspGI CCWGG 6 cut(s) 384, 406, 1595, 1704, 1735, 1856
PspN4I GGNNCC 6 cut(s) 103, 574, 1149, 1308, 1602, 1855
PspPPI RGGWCCY 2 cut(s) 1307, 1657
PstI CTGCAG 4 cut(s) 782, 1462, 1783, 1888
PstNI CAGNNNCTG 2 cut(s) 992, 2161
PsuI RGATCY 3 cut(s) 1008, 1147, 2083
PsyI GACNNNGTC 1 cut(s) 1661
PvuI CGATCG 1 cut(s) 1101
RseI CAYNNNNRTG 5 cut(s) 477, 613, 918, 1471, 1618
SaqAI TTAA 8 cut(s) 12, 417, 540, 894, 1005, 1167, 1317, 1712
SchI GAGTC 1 cut(s) 1582
ScrFI CCNGG 7 cut(s) 386, 408, 719, 1597, 1706, 1737, 1858
SduI GDGCHC 7 cut(s) 610, 1261, 1615, 1691, 1743, 1977, 2233
SexAI ACCWGGT 1 cut(s) 1856
SfaNI GCATC 8 cut(s) 85, 192, 543, 659, 1094, 1116, 1215, 1534
SfcI CTRYAG 5 cut(s) 148, 778, 1458, 1779, 1884
Sfr274I CTCGAG 1 cut(s) 1652
SinI GGWCC 5 cut(s) 676, 830, 1307, 1657, 2029
SlaI CTCGAG 1 cut(s) 1652
SmiMI CAYNNNNRTG 5 cut(s) 477, 613, 918, 1471, 1618
SmlI CTYRAG 4 cut(s) 1004, 1316, 1652, 2010
SmoI CTYRAG 4 cut(s) 1004, 1316, 1652, 2010
SphI GCATGC 1 cut(s) 600
SseBI AGGCCT 1 cut(s) 1709
SsiI CCGC 5 cut(s) 157, 285, 582, 674, 2106
SspMI CTAG 3 cut(s) 516, 1152, 1182
StuI AGGCCT 1 cut(s) 1709
StyD4I CCNGG 7 cut(s) 384, 406, 717, 1595, 1704, 1735, 1856
StyI CCWWGG 3 cut(s) 64, 679, 946
TaiI ACGT 1 cut(s) 964
TaqI TCGA 3 cut(s) 1653, 1668, 1683
TatI WGTACW 5 cut(s) 902, 1312, 1454, 1677, 2018
TauI GCSGC 1 cut(s) 2108
TfiI GAWTC 5 cut(s) 619, 1218, 1288, 1836, 2059
Tru1I TTAA 8 cut(s) 12, 417, 540, 894, 1005, 1167, 1317, 1712
Tru9I TTAA 8 cut(s) 12, 417, 540, 894, 1005, 1167, 1317, 1712
TscAI CASTG 3 cut(s) 184, 912, 2256
TseFI GTSAC 3 cut(s) 587, 1370, 1391
TseI GCWGC 9 cut(s) 287, 302, 395, 702, 1239, 1479, 1778, 1883, 2201
Tsp45I GTSAC 3 cut(s) 587, 1370, 1391
TspDTI ATGAA 7 cut(s) 495, 743, 1055, 1683, 1756, 2051, 2135
TspGWI ACGGA 2 cut(s) 1379, 1449
TspRI CASTG 3 cut(s) 184, 912, 2256
Tth111I GACNNNGTC 1 cut(s) 1661
Van91I CCANNNNNTGG 1 cut(s) 1583
Vha464I CTTAAG 2 cut(s) 1004, 1316
VneI GTGCAC 1 cut(s) 1687
VpaK11BI GGWCC 5 cut(s) 676, 830, 1307, 1657, 2029
XapI RAATTY 7 cut(s) 142, 231, 867, 1062, 1331, 1646, 2023
XceI RCATGY 2 cut(s) 537, 600
XcmI CCANNNNNNNNNTGG 1 cut(s) 2039
XhoI CTCGAG 1 cut(s) 1652
XmiI GTMKAC 1 cut(s) 559
XmnI GAANNNNTTC 1 cut(s) 2216
XspI CTAG 3 cut(s) 516, 1152, 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.