Prupe.3G026500_v2.0.a1

Belongs to the terpene cyclase mutase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
1945817 .. 1948450
2634 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G026500.1

Sequence Viewer

Length: 552 bp
ATGTGGAAGCTTAAGGTTGCAGATGGAGGGAATGACCCTTACATCTACAGCACAAACGACTTTGTGGGGAGGCATATATTTGAGTTTGATGCCGAGGCAGGAACTCCAGAAGAGCGAGCCGAGGTGGAAGAAGCTCGTCTTAATTTCTACAATAATCGCTATCAGGTCAAGCCTAGCAGTGACCTCCTATGGCGTTTGCAGTTCCTAAAAGAGAAGAACTTCAAGCAGACAATTCCCCCAGTAAAGGTTGAGGATGGCGAGGAAATCACATATGAAAAGGCAACAGCCTCACTGAGAATATCTGTTCACTTCTTATCAGCCATGCAGGCAAGTGATGGCCATTGGCCTGCTGAAAATGCTGGCCCATTGTTTTTCCTTCCTCCTTTGGTCATGTGTACATACATTATAGGGCATCTTAATACTGTATTCCCAGCAGAGCATCGCAAAGAAATTCTGCGTTACATATACTATCTGTTGAAATATAATCCTTCTGCAGATTTCCTAGAGCTGAAGTCATCTTCTATTTTTTGTTTTCCTGCTAAGTCTATTTAA

Protein Analysis

184

Amino Acids

21.15

Weight (kDa)

5.75

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 337
AcsI RAATTY 1 cut(s) 450
AcuI CTGAAG 1 cut(s) 530
AfaI GTAC 1 cut(s) 397
AfiI CCNNNNNNNGG 1 cut(s) 244
AflII CTTAAG 1 cut(s) 11
AgsI TTSAA 2 cut(s) 223, 478
AluBI AGCT 3 cut(s) 10, 134, 508
AluI AGCT 3 cut(s) 10, 134, 508
AoxI GGCC 3 cut(s) 337, 344, 361
ApoI RAATTY 1 cut(s) 450
Asp700I GAANNNNTTC 1 cut(s) 218
AspS9I GGNCC 1 cut(s) 362
BalI TGGCCA 1 cut(s) 339
BccI CCATC 3 cut(s) 17, 248, 329
BfaI CTAG 2 cut(s) 174, 503
BfmI CTRYAG 2 cut(s) 46, 492
BfrI CTTAAG 1 cut(s) 11
BglI GCCNNNNNGGC 1 cut(s) 326
BmgT120I GGNCC 1 cut(s) 362
BmrI ACTGGG 1 cut(s) 233
BmsI GCATC 3 cut(s) 79, 421, 448
BmuI ACTGGG 1 cut(s) 233
BpmI CTGGAG 1 cut(s) 90
BsaJI CCNNGG 2 cut(s) 93, 120
Bsc4I CCNNNNNNNGG 1 cut(s) 244
Bse1I ACTGG 1 cut(s) 239
BseDI CCNNGG 2 cut(s) 93, 120
BseGI GGATG 1 cut(s) 259
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMII CTCAG 1 cut(s) 284
BseNI ACTGG 1 cut(s) 239
BseYI CCCAGC 1 cut(s) 430
BshFI GGCC 3 cut(s) 339, 346, 363
BslI CCNNNNNNNGG 1 cut(s) 244
BsnI GGCC 3 cut(s) 339, 346, 363
Bsp1407I TGTACA 1 cut(s) 395
BspANI GGCC 3 cut(s) 339, 346, 363
BspCNI CTCAG 1 cut(s) 285
BspMAI CTGCAG 1 cut(s) 496
BspQI GCTCTTC 1 cut(s) 105
BspTI CTTAAG 1 cut(s) 11
BsrGI TGTACA 1 cut(s) 395
BsrI ACTGG 1 cut(s) 239
BssECI CCNNGG 2 cut(s) 93, 120
Bst4CI ACNGT 1 cut(s) 424
Bst6I CTCTTC 1 cut(s) 105
BstAFI CTTAAG 1 cut(s) 11
BstAUI TGTACA 1 cut(s) 395
BstC8I GCNNGC 4 cut(s) 117, 327, 348, 361
BstDEI CTNAG 2 cut(s) 293, 540
BstF5I GGATG 1 cut(s) 259
BstMWI GCNNNNNNNGC 2 cut(s) 326, 356
BstSFI CTRYAG 2 cut(s) 46, 492
BsuRI GGCC 3 cut(s) 339, 346, 363
BtgZI GCGATG 1 cut(s) 425
BtsCI GGATG 1 cut(s) 259
BtsI GCAGTG 1 cut(s) 184
BtsIMutI CAGTG 2 cut(s) 184, 290
Cac8I GCNNGC 4 cut(s) 117, 327, 348, 361
Cfr13I GGNCC 1 cut(s) 362
Csp6I GTAC 1 cut(s) 396
CviAII CATG 2 cut(s) 322, 391
CviQI GTAC 1 cut(s) 396
DdeI CTNAG 2 cut(s) 293, 540
EaeI YGGCCR 1 cut(s) 337
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 530
FaeI CATG 2 cut(s) 325, 394
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FatI CATG 2 cut(s) 321, 390
FauNDI CATATG 1 cut(s) 271
FokI GGATG 1 cut(s) 266
FspBI CTAG 2 cut(s) 174, 503
GsaI CCCAGC 1 cut(s) 434
GsuI CTGGAG 1 cut(s) 90
HaeIII GGCC 3 cut(s) 339, 346, 363
Hin1II CATG 2 cut(s) 325, 394
HindIII AAGCTT 1 cut(s) 8
Hpy166II GTNNAC 2 cut(s) 307, 396
Hpy188III TCNNGA 1 cut(s) 107
Hpy8I GTNNAC 2 cut(s) 307, 396
HpyAV CCTTC 2 cut(s) 386, 498
HpyCH4III ACNGT 1 cut(s) 424
HpyCH4V TGCA 4 cut(s) 20, 199, 325, 494
HpyF10VI GCNNNNNNNGC 2 cut(s) 326, 356
HpyF3I CTNAG 2 cut(s) 293, 540
Hsp92II CATG 2 cut(s) 325, 394
LguI GCTCTTC 1 cut(s) 105
LpnPI CCDG 8 cut(s) 84, 120, 149, 252, 311, 345, 360, 444
LweI GCATC 3 cut(s) 79, 421, 448
MaeI CTAG 2 cut(s) 174, 503
MaeIII GTNAC 2 cut(s) 179, 458
MboII GAAGA 4 cut(s) 122, 140, 226, 510
MlsI TGGCCA 1 cut(s) 339
MluCI AATT 3 cut(s) 142, 231, 450
MluNI TGGCCA 1 cut(s) 339
MnlI CCTC 9 cut(s) 20, 63, 88, 115, 194, 244, 253, 298, 390
Mox20I TGGCCA 1 cut(s) 339
MroXI GAANNNNTTC 1 cut(s) 218
MscI TGGCCA 1 cut(s) 339
MseI TTAA 4 cut(s) 12, 141, 417, 550
Msp20I TGGCCA 1 cut(s) 339
MspCI CTTAAG 1 cut(s) 11
MwoI GCNNNNNNNGC 2 cut(s) 326, 356
NdeI CATATG 1 cut(s) 271
NlaIII CATG 2 cut(s) 325, 394
NmeAIII GCCGAG 2 cut(s) 118, 145
NmuCI GTSAC 1 cut(s) 179
PciSI GCTCTTC 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 218
PspFI CCCAGC 1 cut(s) 430
PspPI GGNCC 1 cut(s) 362
PstI CTGCAG 1 cut(s) 496
RsaI GTAC 1 cut(s) 397
RsaNI GTAC 1 cut(s) 396
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 4 cut(s) 12, 141, 417, 550
Sau96I GGNCC 1 cut(s) 362
SetI ASST 8 cut(s) 12, 18, 126, 136, 168, 186, 249, 510
SfaNI GCATC 3 cut(s) 79, 421, 448
SfcI CTRYAG 2 cut(s) 46, 492
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
Sse9I AATT 3 cut(s) 142, 231, 450
SspMI CTAG 2 cut(s) 174, 503
TaaI ACNGT 1 cut(s) 424
TasI AATT 3 cut(s) 142, 231, 450
TatI WGTACW 1 cut(s) 395
Tru1I TTAA 4 cut(s) 12, 141, 417, 550
Tru9I TTAA 4 cut(s) 12, 141, 417, 550
TscAI CASTG 2 cut(s) 184, 297
TseFI GTSAC 1 cut(s) 179
Tsp45I GTSAC 1 cut(s) 179
TspDTI ATGAA 1 cut(s) 288
TspRI CASTG 2 cut(s) 184, 297
Vha464I CTTAAG 1 cut(s) 11
XapI RAATTY 1 cut(s) 450
XmnI GAANNNNTTC 1 cut(s) 218
XspI CTAG 2 cut(s) 174, 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.