Rw2G038080

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000173
Physical Location & Seq
Forward (+)
62922301 .. 62931170
8870 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G038080.1

Sequence Viewer

Length: 2244 bp
ATGTGGAAGCTTAAGGTTGCAGAAGGTGGGGATTCCTCAGCTTACATTTACAGCACAAACAACTTTGTCGGAAGGCAGACATGGGTGTTTGATTCGGATGCAGGAACTCCTGAAGAGCGAGCTGAGGTTGAAGAGGCCAGTCTTCATTTCTACAACAACCGCTATCAGGTCAAGCCCAGTGGTGACATTCTTTGGCGTATGCAGTTCCTAAGGGAGAAGAAGTTCAAACAGACAATTCCTCCAGTAAAAATTGAAGATGGCGAGGTTATCACACATGAAAAAACCACAGATGCACTGAGAAGGTCTGTCCACTTCTTCTCAGCGTTGCAGGCAAGCGATGGCCATTGGCCTGCGGAAAATGCCGGCCCTTTGTTTTTCCTTCCTCCCTTGGTCATATGTATGTACATTACTGGCCATCTTAACAGTGTATTCCCTGAAGAGCATCGCAAAGAAATTCTGCGTTACATATACTATCATCAGAATGAAGATGGTGGTTGGGGACTTCACGTCGAAGGTCACAGCACCATGTTCAGCACAGCTCTCAGCTACATTTGTATGCGTATTCTCGGAGAAGGACCTGATGATGGTGGCCAAGACAATGCTTGTCCAAGAGCAAGAAAGTGGATTCTTGATCACGGTGGTGTCACACACATACCCTCTTGGGGAAAGACTTGGCTTTCGATACTTGGTCTGTTTGATTGGTCTGGAAGCAACCCTATGCCCCCAGAGTTTTGGATTCTTCCTTCGATGGTTTACATGCCAATGTCATACCTATATGGAAAAAGGTTTGTTGGCCCAATTACACCTCTCATTCTTCAATTGAGGGAAGAACTTTTTATTCAACCTTACAATGAAATCAATTGGAAGAAAGTACGCCATCTATGTGCCAAAGAGGACATCTACTATCCTCATCCTTGGATACAGGATCTCCTTTGGGATAGCCTCTACATTTCCACAGAGCCTATTCTTACTCGTTGGCCCTTCAACAAATTGATCAGAGAAAAGGCTCTTCAAGTGACGATGAAGCATATTCATTACGAAGATGAGAACAGTCGATACATTACCATTGGGTGTGTGGAAAAGGTGTTATGTATGCTTGCCTGTTGGGTTGAAGATCCAAATGGGGACTATTTCAAGAAGCATCTGGCAAGGGTCCCGGATTATTTATGGGTTGCTGAAGATGGAATGAAGATGCAAAGTTTTGGCAGTCAGGAGTGGGATACTGGTTTTGCCATTCAAGCTTTGCTTGCTACTAATCTAACGGACGAAATTGGACCAACGCTCGCTAGAGGACATGACTTCATAAAGAAATCTCAGGTCAAAGATAACCCATCTGGTGACTTCAAAAGCATGCACCGCCACATTTCCAAAGGATCGTGGACTTTCTCCGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTAAAGTGTTGCCTTCTATTGTCGATGATGCCATCGGAGATAGTTGGTGAAAAAATGGAACCTGAGCGCTTGCACGATTCTGTCAATGTTCTACTTTCCCTACAGAGCAAGAATGGTGGTTTATCAGCCTGGGAACCAGCAGGGGCAGCAGAGTGGTTAGAACTATTAAATCCGACAGAGTTCTTCGCAGACATAGTAATTGAGCATGAATATGTTGAGTGCACTTCATCTGCAATCCAGGCTTTAGTACTGTTTAAGAAGCTACACCCTGGACACCGGAAGAAAGAGATTGAACATTTCATCACCAATGCTATACACTACCTTGAAAATATACAAATGCCGGATGGTTCATGGTATGGAAACTGGGGAGTTTGCTTCACATATGGTACCTGGTTTGCAGTAGGAGGATTGGCAGCAGCTGGCAAGACTTTCAGCACTTGTGCAGCCATGCGCAAAGCGGTTAGTTTTCTCCTCACAACGCAGAGAGAGAATGGTGGTTGGGGAGAGAGCTATCTTTCATGTCCGCAAAAGACATACATTCCTCTCAAAGGAAATCGATCCAATTTAGTACATACTGCTTGGGCTATGATGGGTCTCATTCATGCGGGACAGGCAGAAAGAGACCCAACACCTCTTCATCGTGCAGCAAAGGTTATAATTAATTCTCAATTGGAAAATGGTGATTTTCCGCAGCAGGAAATCACTGGAGTCTTCATGAAGAACTGCATGCTACATTATGCAGCTTATAGAAATATATACCCACTCTGGGCTCTTGCAGAATACCGCAAGCGGGTTCCATTGCCTTCCTAG

Protein Analysis

747

Amino Acids

85.41

Weight (kDa)

6.11

Isoelectric Point (pI)

47.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 100 - 349 1.8e-26 Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C PF13243 405 - 741 4.2e-51 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2090
Acc16I TGCGCA 1 cut(s) 1886
Acc65I GGTACC 1 cut(s) 1820
AccB1I GGYRCC 1 cut(s) 1820
AciI CCGC 9 cut(s) 160, 353, 1357, 1892, 1958, 2039, 2123, 2218, 2224
AclWI GGATC 4 cut(s) 933, 1109, 1381, 1986
AcoI YGGCCR 3 cut(s) 340, 412, 589
AcsI RAATTY 1 cut(s) 453
AcuI CTGAAG 3 cut(s) 132, 456, 1197
AfaI GTAC 5 cut(s) 404, 873, 1683, 1822, 2004
AfeI AGCGCT 1 cut(s) 1502
AfiI CCNNNNNNNGG 6 cut(s) 166, 584, 662, 1982, 2200, 2224
AflII CTTAAG 1 cut(s) 11
AhdI GACNNNNNGTC 1 cut(s) 506
AjiI CACGTC 1 cut(s) 508
AjnI CCWGG 4 cut(s) 1562, 1671, 1702, 1823
AleI CACNNNNGTG 1 cut(s) 639
AloI GAACNNNNNNTCC 2 cut(s) 206, 238
Alw21I GWGCWC 1 cut(s) 1658
Alw26I GTCTC 2 cut(s) 2033, 2049
Alw44I GTGCAC 1 cut(s) 1654
AlwI GGATC 4 cut(s) 933, 1109, 1381, 1986
AlwNI CAGNNNCTG 1 cut(s) 1853
Aor51HI AGCGCT 1 cut(s) 1502
AoxI GGCC 8 cut(s) 135, 340, 347, 364, 412, 589, 793, 977
ApaLI GTGCAC 1 cut(s) 1654
ApeKI GCWGC 7 cut(s) 1580, 1847, 1850, 1877, 2078, 2125, 2174
ApoI RAATTY 1 cut(s) 453
ArsI GACNNNNNNTTYG 2 cut(s) 661, 693
AseI ATTAAT 1 cut(s) 2094
Asp700I GAANNNNTTC 1 cut(s) 221
Asp718I GGTACC 1 cut(s) 1820
AspLEI GCGC 2 cut(s) 1503, 1887
AspS9I GGNCC 6 cut(s) 365, 575, 794, 978, 1153, 1274
AsuC2I CCSGG 1 cut(s) 1157
AsuHPI GGTGA 5 cut(s) 194, 1349, 1493, 1729, 2126
AvaII GGWCC 3 cut(s) 575, 1153, 1274
AxyI CCTNAGG 1 cut(s) 209
BaeGI GKGCMC 1 cut(s) 1658
BalI TGGCCA 3 cut(s) 342, 414, 591
BanI GGYRCC 1 cut(s) 1820
BanII GRGCYC 1 cut(s) 2206
BbsI GAAGAC 2 cut(s) 134, 2137
Bbv12I GWGCWC 1 cut(s) 1658
BbvCI CCTCAGC 2 cut(s) 37, 123
BbvI GCAGC 7 cut(s) 1592, 1859, 1862, 1889, 2090, 2137, 2186
BciT130I CCWGG 4 cut(s) 1564, 1673, 1704, 1825
BciVI GTATCC 2 cut(s) 912, 1213
BclI TGATCA 2 cut(s) 631, 993
BcnI CCSGG 1 cut(s) 1157
BcoDI GTCTC 2 cut(s) 2033, 2049
BfaI CTAG 2 cut(s) 1287, 2242
BfmI CTRYAG 2 cut(s) 1425, 1535
BfoI RGCGCY 1 cut(s) 1504
BfrI CTTAAG 1 cut(s) 11
BfuI GTATCC 2 cut(s) 912, 1213
BisI GCNGC 7 cut(s) 1581, 1848, 1851, 1878, 2079, 2126, 2175
BlsI GCNGC 7 cut(s) 1582, 1849, 1852, 1879, 2080, 2127, 2176
BmcAI AGTACT 1 cut(s) 1683
Bme1390I CCNGG 5 cut(s) 1157, 1564, 1673, 1704, 1825
Bme18I GGWCC 3 cut(s) 575, 1153, 1274
BmeRI GACNNNNNGTC 1 cut(s) 506
BmgBI CACGTC 1 cut(s) 508
BmgT120I GGNCC 6 cut(s) 365, 575, 794, 978, 1153, 1274
BmiI GGNNCC 6 cut(s) 1154, 1155, 1494, 1569, 1822, 2229
BmrFI CCNGG 5 cut(s) 1157, 1564, 1673, 1704, 1825
BmrI ACTGGG 2 cut(s) 171, 1807
BmsI GCATC 6 cut(s) 88, 280, 451, 1150, 1182, 1452
BmuI ACTGGG 2 cut(s) 171, 1807
BpiI GAAGAC 2 cut(s) 134, 2137
BpmI CTGGAG 2 cut(s) 225, 2160
Bpu10I CCTNAGC 3 cut(s) 37, 123, 1497
BpuMI CCSGG 1 cut(s) 1157
Bsa29I ATCGAT 1 cut(s) 1990
BsaBI GATNNNNATC 1 cut(s) 1395
BsaI GGTCTC 2 cut(s) 2033, 2049
BsaJI CCNNGG 4 cut(s) 387, 914, 1563, 1702
BsaWI WCCGGW 1 cut(s) 1710
BsaXI ACNNNNNCTCC 6 cut(s) 206, 223, 236, 253, 912, 942
Bsc4I CCNNNNNNNGG 6 cut(s) 166, 584, 662, 1982, 2200, 2224
Bse118I RCCGGY 1 cut(s) 362
Bse1I ACTGG 7 cut(s) 138, 177, 242, 415, 1228, 1802, 2143
Bse21I CCTNAGG 1 cut(s) 209
Bse3DI GCAATG 1 cut(s) 2231
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 4 cut(s) 1564, 1673, 1704, 1825
BseCI ATCGAT 1 cut(s) 1990
BseDI CCNNGG 4 cut(s) 387, 914, 1563, 1702
BseGI GGATG 4 cut(s) 103, 910, 1409, 1783
BseJI GATNNNNATC 1 cut(s) 1395
BseLI CCNNNNNNNGG 6 cut(s) 166, 584, 662, 1982, 2200, 2224
BseMI GCAATG 1 cut(s) 2231
BseMII CTCAG 7 cut(s) 51, 114, 287, 333, 556, 1328, 1488
BseNI ACTGG 7 cut(s) 138, 177, 242, 415, 1228, 1802, 2143
BseRI GAGGAG 1 cut(s) 1895
BseSI GKGCMC 1 cut(s) 1658
BseXI GCAGC 7 cut(s) 1592, 1859, 1862, 1889, 2090, 2137, 2186
BsgI GTGCAG 2 cut(s) 1896, 2097
BshFI GGCC 8 cut(s) 137, 342, 349, 366, 414, 591, 795, 979
BshNI GGYRCC 1 cut(s) 1820
BshVI ATCGAT 1 cut(s) 1990
BsiHKAI GWGCWC 1 cut(s) 1658
BsiSI CCGG 4 cut(s) 363, 1157, 1711, 1775
BslFI GGGAC 4 cut(s) 513, 1139, 1139, 2055
BslI CCNNNNNNNGG 6 cut(s) 166, 584, 662, 1982, 2200, 2224
BsmAI GTCTC 2 cut(s) 2033, 2049
BsmFI GGGAC 4 cut(s) 513, 1139, 1139, 2055
BsnI GGCC 8 cut(s) 137, 342, 349, 366, 414, 591, 795, 979
Bso31I GGTCTC 2 cut(s) 2033, 2049
Bsp1286I GDGCHC 2 cut(s) 1658, 2206
Bsp1407I TGTACA 1 cut(s) 402
Bsp143I GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
BspACI CCGC 9 cut(s) 160, 353, 1357, 1892, 1958, 2039, 2123, 2218, 2224
BspANI GGCC 8 cut(s) 137, 342, 349, 366, 414, 591, 795, 979
BspCNI CTCAG 7 cut(s) 50, 115, 288, 332, 555, 1327, 1489
BspDI ATCGAT 1 cut(s) 1990
BspHI TCATGA 1 cut(s) 2148
BspLI GGNNCC 6 cut(s) 1154, 1155, 1494, 1569, 1822, 2229
BspMAI CTGCAG 1 cut(s) 1429
BspPI GGATC 4 cut(s) 933, 1109, 1381, 1986
BspQI GCTCTTC 3 cut(s) 108, 432, 1014
BspT107I GGYRCC 1 cut(s) 1820
BspTI CTTAAG 1 cut(s) 11
BspTNI GGTCTC 2 cut(s) 2033, 2049
BsrDI GCAATG 1 cut(s) 2231
BsrFI RCCGGY 1 cut(s) 362
BsrGI TGTACA 1 cut(s) 402
BsrI ACTGG 7 cut(s) 138, 177, 242, 415, 1228, 1802, 2143
BssAI RCCGGY 1 cut(s) 362
BssECI CCNNGG 4 cut(s) 387, 914, 1563, 1702
BssMI GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
BssT1I CCWWGG 2 cut(s) 387, 914
Bst2UI CCWGG 4 cut(s) 1564, 1673, 1704, 1825
Bst4CI ACNGT 4 cut(s) 425, 638, 1052, 1686
Bst6I CTCTTC 5 cut(s) 108, 126, 432, 1014, 2073
BstAFI CTTAAG 1 cut(s) 11
BstAUI TGTACA 1 cut(s) 402
BstDEI CTNAG 8 cut(s) 37, 123, 209, 296, 319, 542, 1314, 1497
BstENI CCTNNNNNAGG 1 cut(s) 1980
BstF5I GGATG 4 cut(s) 103, 910, 1409, 1783
BstH2I RGCGCY 1 cut(s) 1504
BstHHI GCGC 2 cut(s) 1503, 1887
BstKTI GATC 8 cut(s) 634, 928, 996, 1117, 1376, 1393, 1399, 1994
BstMAI GTCTC 2 cut(s) 2033, 2049
BstMBI GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
BstMWI GCNNNNNNNGC 8 cut(s) 329, 359, 1238, 1247, 1356, 1580, 1673, 2045
BstNI CCWGG 4 cut(s) 1564, 1673, 1704, 1825
BstNSI RCATGY 3 cut(s) 760, 1354, 2164
BstSCI CCNGG 5 cut(s) 1155, 1562, 1671, 1702, 1823
BstSFI CTRYAG 2 cut(s) 1425, 1535
BstSLI GKGCMC 1 cut(s) 1658
BstV1I GCAGC 7 cut(s) 1592, 1859, 1862, 1889, 2090, 2137, 2186
BstV2I GAAGAC 2 cut(s) 134, 2137
BstX2I RGATCY 2 cut(s) 925, 1114
BstXI CCANNNNNNTGG 1 cut(s) 732
BstYI RGATCY 2 cut(s) 925, 1114
Bsu15I ATCGAT 1 cut(s) 1990
Bsu36I CCTNAGG 1 cut(s) 209
BsuI GTATCC 2 cut(s) 912, 1213
BsuRI GGCC 8 cut(s) 137, 342, 349, 366, 414, 591, 795, 979
BsuTUI ATCGAT 1 cut(s) 1990
BtgZI GCGATG 2 cut(s) 351, 428
BtrI CACGTC 1 cut(s) 508
BtsCI GGATG 4 cut(s) 103, 910, 1409, 1783
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 5 cut(s) 184, 293, 430, 1422, 2136
CaiI CAGNNNCTG 1 cut(s) 1853
CciI TCATGA 1 cut(s) 2148
CfoI GCGC 2 cut(s) 1503, 1887
Cfr10I RCCGGY 1 cut(s) 362
Cfr13I GGNCC 6 cut(s) 365, 575, 794, 978, 1153, 1274
ClaI ATCGAT 1 cut(s) 1990
CsiI ACCWGGT 1 cut(s) 1823
Csp6I GTAC 5 cut(s) 403, 872, 1682, 1821, 2003
CspCI CAANNNNNGTGG 4 cut(s) 160, 195, 1531, 1566
CviQI GTAC 5 cut(s) 403, 872, 1682, 1821, 2003
DdeI CTNAG 8 cut(s) 37, 123, 209, 296, 319, 542, 1314, 1497
DpnI GATC 8 cut(s) 633, 927, 995, 1116, 1375, 1392, 1398, 1993
DpnII GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
DraI TTTAAA 1 cut(s) 1437
DriI GACNNNNNGTC 1 cut(s) 506
EaeI YGGCCR 3 cut(s) 340, 412, 589
Eam1104I CTCTTC 5 cut(s) 108, 126, 432, 1014, 2073
Eam1105I GACNNNNNGTC 1 cut(s) 506
EarI CTCTTC 5 cut(s) 108, 126, 432, 1014, 2073
Eco130I CCWWGG 2 cut(s) 387, 914
Eco24I GRGCYC 1 cut(s) 2206
Eco31I GGTCTC 2 cut(s) 2033, 2049
Eco47I GGWCC 3 cut(s) 575, 1153, 1274
Eco47III AGCGCT 1 cut(s) 1502
Eco57I CTGAAG 3 cut(s) 132, 456, 1197
Eco81I CCTNAGG 1 cut(s) 209
EcoNI CCTNNNNNAGG 1 cut(s) 1980
EcoO109I RGGNCCY 2 cut(s) 575, 1153
EcoRII CCWGG 4 cut(s) 1562, 1671, 1702, 1823
EcoT14I CCWWGG 2 cut(s) 387, 914
EcoT38I GRGCYC 1 cut(s) 2206
ErhI CCWWGG 2 cut(s) 387, 914
FalI AAGNNNNNCTT 2 cut(s) 1230, 1262
FaqI GGGAC 4 cut(s) 513, 1139, 1139, 2055
FauI CCCGC 2 cut(s) 2032, 2217
FauNDI CATATG 2 cut(s) 395, 1816
FbaI TGATCA 2 cut(s) 631, 993
Fnu4HI GCNGC 7 cut(s) 1581, 1848, 1851, 1878, 2079, 2126, 2175
FokI GGATG 4 cut(s) 110, 897, 1416, 1790
FriOI GRGCYC 1 cut(s) 2206
Fsp4HI GCNGC 7 cut(s) 1581, 1848, 1851, 1878, 2079, 2126, 2175
FspBI CTAG 2 cut(s) 1287, 2242
FspI TGCGCA 1 cut(s) 1886
GlaI GCGC 2 cut(s) 1502, 1886
GluI GCNGC 7 cut(s) 1581, 1848, 1851, 1878, 2079, 2126, 2175
GsuI CTGGAG 2 cut(s) 225, 2160
HaeII RGCGCY 1 cut(s) 1504
HaeIII GGCC 8 cut(s) 137, 342, 349, 366, 414, 591, 795, 979
HapII CCGG 4 cut(s) 363, 1157, 1711, 1775
HhaI GCGC 2 cut(s) 1503, 1887
Hin6I GCGC 2 cut(s) 1501, 1885
HinP1I GCGC 2 cut(s) 1501, 1885
HindIII AAGCTT 2 cut(s) 8, 1239
HinfI GANTC 6 cut(s) 32, 92, 625, 736, 1511, 2142
HpaII CCGG 4 cut(s) 363, 1157, 1711, 1775
HphI GGTGA 5 cut(s) 194, 1349, 1493, 1729, 2126
Hpy166II GTNNAC 4 cut(s) 310, 754, 1380, 1656
Hpy188I TCNGA 9 cut(s) 71, 97, 480, 569, 998, 1390, 1417, 1471, 1608
Hpy188III TCNNGA 7 cut(s) 110, 629, 705, 1135, 1211, 1394, 2149
Hpy8I GTNNAC 4 cut(s) 310, 754, 1380, 1656
Hpy99I CGWCG 1 cut(s) 512
HpyCH4III ACNGT 4 cut(s) 425, 638, 1052, 1686
HpyCH4IV ACGT 1 cut(s) 507
HpyF10VI GCNNNNNNNGC 8 cut(s) 329, 359, 1238, 1247, 1356, 1580, 1673, 2045
HpyF3I CTNAG 8 cut(s) 37, 123, 209, 296, 319, 542, 1314, 1497
HpySE526I ACGT 1 cut(s) 507
HspAI GCGC 2 cut(s) 1501, 1885
KflI GGGWCCC 1 cut(s) 1153
KpnI GGTACC 1 cut(s) 1824
KroI GCCGGC 1 cut(s) 362
KroNI GCCGGC 1 cut(s) 364
Ksp22I TGATCA 2 cut(s) 631, 993
Kzo9I GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
LguI GCTCTTC 3 cut(s) 108, 432, 1014
Lsp1109I GCAGC 7 cut(s) 1592, 1859, 1862, 1889, 2090, 2137, 2186
LweI GCATC 6 cut(s) 88, 280, 451, 1150, 1182, 1452
MabI ACCWGGT 1 cut(s) 1823
MaeI CTAG 2 cut(s) 1287, 2242
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 6 cut(s) 182, 461, 515, 643, 1015, 1337
MalI GATC 8 cut(s) 633, 927, 995, 1116, 1375, 1392, 1398, 1993
MboI GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
MfeI CAATTG 3 cut(s) 818, 859, 2102
MflI RGATCY 2 cut(s) 925, 1114
MhlI GDGCHC 2 cut(s) 1658, 2206
MlsI TGGCCA 3 cut(s) 342, 414, 591
MluNI TGGCCA 3 cut(s) 342, 414, 591
MlyI GAGTC 1 cut(s) 2151
MmeI TCCRAC 2 cut(s) 49, 1631
Mox20I TGGCCA 3 cut(s) 342, 414, 591
MroNI GCCGGC 1 cut(s) 362
MroXI GAANNNNTTC 1 cut(s) 221
MscI TGGCCA 3 cut(s) 342, 414, 591
MseI TTAA 6 cut(s) 12, 420, 1436, 1601, 1689, 2094
MslI CAYNNNNRTG 7 cut(s) 398, 480, 554, 639, 761, 882, 1644
Msp20I TGGCCA 3 cut(s) 342, 414, 591
MspA1I CMGCKG 1 cut(s) 1853
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 4 cut(s) 363, 1157, 1711, 1775
MspR9I CCNGG 5 cut(s) 1157, 1564, 1673, 1704, 1825
MunI CAATTG 3 cut(s) 818, 859, 2102
MvaI CCWGG 4 cut(s) 1564, 1673, 1704, 1825
MwoI GCNNNNNNNGC 8 cut(s) 329, 359, 1238, 1247, 1356, 1580, 1673, 2045
NaeI GCCGGC 1 cut(s) 364
NciI CCSGG 1 cut(s) 1157
NdeI CATATG 2 cut(s) 395, 1816
NdeII GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
NgoMIV GCCGGC 1 cut(s) 362
NlaIV GGNNCC 6 cut(s) 1154, 1155, 1494, 1569, 1822, 2229
NmuCI GTSAC 5 cut(s) 182, 515, 643, 1015, 1337
NsbI TGCGCA 1 cut(s) 1886
NspI RCATGY 3 cut(s) 760, 1354, 2164
OliI CACNNNNGTG 1 cut(s) 639
PaeI GCATGC 2 cut(s) 1354, 2164
PagI TCATGA 1 cut(s) 2148
PciSI GCTCTTC 3 cut(s) 108, 432, 1014
PdiI GCCGGC 1 cut(s) 364
PdmI GAANNNNTTC 1 cut(s) 221
PfeI GAWTC 5 cut(s) 32, 92, 625, 736, 1511
PfoI TCCNGGA 1 cut(s) 1155
PkrI GCNGC 7 cut(s) 1582, 1849, 1852, 1879, 2080, 2127, 2176
PleI GAGTC 1 cut(s) 2150
PpsI GAGTC 1 cut(s) 2150
PpuMI RGGWCCY 2 cut(s) 575, 1153
PshBI ATTAAT 1 cut(s) 2094
PsiI TTATAA 1 cut(s) 2090
Psp5II RGGWCCY 2 cut(s) 575, 1153
Psp6I CCWGG 4 cut(s) 1562, 1671, 1702, 1823
PspGI CCWGG 4 cut(s) 1562, 1671, 1702, 1823
PspN4I GGNNCC 6 cut(s) 1154, 1155, 1494, 1569, 1822, 2229
PspPI GGNCC 6 cut(s) 365, 575, 794, 978, 1153, 1274
PspPPI RGGWCCY 2 cut(s) 575, 1153
PsrI GAACNNNNNNTAC 2 cut(s) 1040, 1072
PstI CTGCAG 1 cut(s) 1429
PstNI CAGNNNCTG 1 cut(s) 1853
PsuI RGATCY 2 cut(s) 925, 1114
PvuII CAGCTG 1 cut(s) 1853
RsaI GTAC 5 cut(s) 404, 873, 1683, 1822, 2004
RsaNI GTAC 5 cut(s) 403, 872, 1682, 1821, 2003
RseI CAYNNNNRTG 7 cut(s) 398, 480, 554, 639, 761, 882, 1644
SapI GCTCTTC 3 cut(s) 108, 432, 1014
SaqAI TTAA 6 cut(s) 12, 420, 1436, 1601, 1689, 2094
SatI GCNGC 7 cut(s) 1581, 1848, 1851, 1878, 2079, 2126, 2175
Sau3AI GATC 8 cut(s) 631, 925, 993, 1114, 1373, 1390, 1396, 1991
Sau96I GGNCC 6 cut(s) 365, 575, 794, 978, 1153, 1274
ScaI AGTACT 1 cut(s) 1683
SchI GAGTC 1 cut(s) 2151
ScrFI CCNGG 5 cut(s) 1157, 1564, 1673, 1704, 1825
SduI GDGCHC 2 cut(s) 1658, 2206
SexAI ACCWGGT 1 cut(s) 1823
SfaNI GCATC 6 cut(s) 88, 280, 451, 1150, 1182, 1452
SfcI CTRYAG 2 cut(s) 1425, 1535
SinI GGWCC 3 cut(s) 575, 1153, 1274
SmiMI CAYNNNNRTG 7 cut(s) 398, 480, 554, 639, 761, 882, 1644
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
SphI GCATGC 2 cut(s) 1354, 2164
SsiI CCGC 9 cut(s) 160, 353, 1357, 1892, 1958, 2039, 2123, 2218, 2224
SspMI CTAG 2 cut(s) 1287, 2242
StyD4I CCNGG 5 cut(s) 1155, 1562, 1671, 1702, 1823
StyI CCWWGG 2 cut(s) 387, 914
TaaI ACNGT 4 cut(s) 425, 638, 1052, 1686
TaiI ACGT 1 cut(s) 510
TaqI TCGA 6 cut(s) 510, 680, 746, 1054, 1457, 1990
TatI WGTACW 3 cut(s) 402, 1681, 2002
TfiI GAWTC 5 cut(s) 32, 92, 625, 736, 1511
Tru1I TTAA 6 cut(s) 12, 420, 1436, 1601, 1689, 2094
Tru9I TTAA 6 cut(s) 12, 420, 1436, 1601, 1689, 2094
TscAI CASTG 5 cut(s) 184, 300, 430, 1429, 2143
TseFI GTSAC 5 cut(s) 182, 515, 643, 1015, 1337
TseI GCWGC 7 cut(s) 1580, 1847, 1850, 1877, 2078, 2125, 2174
Tsp45I GTSAC 5 cut(s) 182, 515, 643, 1015, 1337
TspGWI ACGGA 1 cut(s) 1277
TspRI CASTG 5 cut(s) 184, 300, 430, 1429, 2143
Vha464I CTTAAG 1 cut(s) 11
VneI GTGCAC 1 cut(s) 1654
VpaK11BI GGWCC 3 cut(s) 575, 1153, 1274
VspI ATTAAT 1 cut(s) 2094
XagI CCTNNNNNAGG 1 cut(s) 1980
XapI RAATTY 1 cut(s) 453
XceI RCATGY 3 cut(s) 760, 1354, 2164
XcmI CCANNNNNNNNNTGG 1 cut(s) 1072
XmnI GAANNNNTTC 1 cut(s) 221
XspI CTAG 2 cut(s) 1287, 2242
ZrmI AGTACT 1 cut(s) 1683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.