Prupe.3G025800_v2.0.a1

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000173
Physical Location & Seq
Forward (+)
1889271 .. 1901421
12151 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G025800.1

Sequence Viewer

Length: 2160 bp
ATGTGGAAGCTGAAGTTTGGAGCTGAGGGTGAAAATGTTGACCCTCACTTGTTCAGCACAAACGAGTTTGTGGGAAGGCAGATATGGGAGTTTGATCCTCATGCAGGCACACCTCAAGAGCGAGCCGAGCTTCACAGAGAGAGAAATTTCAAGCAAACAATTCCCCAAGTTAAAATCGAAGATGATGATGAGGAATGTAGACATGAAAAAGCCACCGCTGCATTGAAAAGGGCCGTTGCCTACTGGTCTGCCTTGCAATCACCACACGGCCATTGGCCCGCTGAAACCACTGGGCCTTTGTTTTATACTCCTCCCCTTGTCATGGCCCTGTATATTACGGGCCATCTTAATATGGTTTTCTCTGCAGACCATCGTAAGGAAATGCTTTGGTACATGTACTGTCACCAGAACGAAGATGGTGGGTGGGGATTACACATAGAGGGCCATAGTATGATGTTTTGTACACTTCTGAACTACATTTGTATGCGTCTACTTGGCGAAGGACCCGATGGTGGTCTAGACAATGCTTGTGCAAGAGCAAGGAAATGGATTCTTGATCATGGTGGTGCAACACACTCTTCATCTTGGGGAAAGATTTGGATGGCAATACTCGGTGTGTATGATTGGGAGGGAAACAACCCTATTCCCCCAGAGCTCTGGAGCTGCCCATCTTTCCTCCCTTTTCATCCAGCAAAAATACTCTGCTATACTCGCATGGCTTACTTGCCTATGTCATATTTGTTTGGGAAAAGATTTGTTGGCCCCATCACACCCCTCATTCTGCAACTGAGAGAAGAAATCTACAATGAACCTTACAATGAAAATAAATGGAGCAAAGTGCGCCATCTGTGTGCAAAAGAGGATAACTACTATCCCCATGGTAAGTTACAATCCTTGATGTGGGATAGTCTTCACACAATCTGTGAGCCTCTTTTCACTCGCTGGCCCTTCAAAAAGTTCAGAGAGAAGGCTCTTCAAGAAACCAGTAAACACATTCATTATGAAGACGAGAATACTCGATACATTACTATTGGAGTTGTGATAAAGAAGCATCTTGCAAGGATTGCAAATTTCATATGGGTTGCAGAAGATGGAATGAAAATGCAGAGTTTTGGTAGCCAGATGTGGGATGCTAGTTTCGCCATTCAAGCTTTGCTTGCTGCAAATCTGAATGATGAACTTGGATGTGTACTTAAGAAAGGACATAACTTCCTTAAGAAATCTCAGGTTAGAGATAATCCTTCTGGTGACTTTTTAGCCCATTTTCGCCACATTTCTAAAGGAGCATGGACTTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGTACTGCAGAAGCTTTGAAGAGTTGCTTGTTGTTATCGATGCTGCAACCACAACTCGTCGGTGAACAACTAGAACCTGAGCGTTTATATGATGCTGTCAATGTCATACTTTCTCTGCAGAGTCCAAATGGTGGTGTATCAGCCTGGGAACCGGCAGGAGCTCCAAAATGGTTGGAGTGGTTCAACCCTATAGAATTTCTCGGGGATCTCATGATCGAATATGAGCACGTCGAGTGCACCTCATCTTCAATCCAGGCTTTAGCTTTGTTTAGGAAGTTATACCCTGCCCACAGAAAGAAACAGATAGATAATTTCATCACAACTGCTACAGGGTTCATTGAAGACATACAAAATCCTGATGGGTCATGGTATGGAAACTGGGGAATCTGCTTCATTTATGGAACATCGTTTGCAATCAGAGGGTTAGAGGCTGCTGGCAAGACTTACAATAATTGTGAGGCTATACGCCGAGGTGTTGAATTTTTACTCAAAACACAGAGAGATGATGGTGGATGGGGAGAGAGCTACATTTCTTGTACAAACAAGATCTATACACCTCTTGAAGGAGACCGATCCAATTTGGTGCAGACTGCAATGGGATTAATGGGTTTAATTCATGGTGGACAGGCGGAGAGAGACCCTACTCCTATTCACCAAGCTGCAAAGATGTTGATCAATTCTCAATTGGAAAATGGCGATTTCCCCCAGCAGGAAGTGATGGGAGTTTTCATGAGGAATGGCATGTTACACTACGCAGCATACAGGAATACTATCCCAATTTGGGCTCTTGCAGAATACTGCAATATGGTTCCAAAGCCTCTCTATGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

720

Amino Acids

82.22

Weight (kDa)

6.09

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1460
AccI GTMKAC 2 cut(s) 199, 490
AciI CCGC 3 cut(s) 216, 279, 1958
AclWI GGATC 3 cut(s) 89, 1542, 1896
AcoI YGGCCR 1 cut(s) 268
AcsI RAATTY 4 cut(s) 145, 1069, 1523, 1808
AcuI CTGAAG 1 cut(s) 32
AfaI GTAC 6 cut(s) 392, 398, 463, 1191, 1333, 1867
AflII CTTAAG 2 cut(s) 1193, 1214
AflIII ACRYGT 1 cut(s) 393
AjiI CACGTC 1 cut(s) 1558
AjnI CCWGG 2 cut(s) 1472, 1581
Alw21I GWGCWC 4 cut(s) 657, 1492, 1557, 1568
Alw26I GTCTC 2 cut(s) 1890, 1959
Alw44I GTGCAC 1 cut(s) 1564
AlwI GGATC 3 cut(s) 89, 1542, 1896
Ama87I CYCGRG 1 cut(s) 1529
AoxI GGCC 9 cut(s) 231, 268, 275, 293, 324, 340, 442, 760, 944
ApaLI GTGCAC 1 cut(s) 1564
ApeKI GCWGC 7 cut(s) 218, 663, 1160, 1372, 1760, 1988, 2084
ApoI RAATTY 4 cut(s) 145, 1069, 1523, 1808
AseI ATTAAT 1 cut(s) 1931
AspLEI GCGC 1 cut(s) 843
AspS9I GGNCC 9 cut(s) 231, 276, 293, 325, 340, 442, 503, 761, 945
AsuHPI GGTGA 6 cut(s) 41, 252, 395, 1259, 1403, 1973
AvaI CYCGRG 1 cut(s) 1529
AvaII GGWCC 1 cut(s) 503
BaeGI GKGCMC 1 cut(s) 1568
BanII GRGCYC 3 cut(s) 657, 1492, 2116
BbsI GAAGAC 3 cut(s) 902, 1011, 1677
Bbv12I GWGCWC 4 cut(s) 657, 1492, 1557, 1568
BbvCI CCTCAGC 1 cut(s) 24
BbvI GCAGC 7 cut(s) 205, 650, 1147, 1359, 1747, 1975, 2096
BceAI ACGGC 2 cut(s) 218, 283
BciT130I CCWGG 2 cut(s) 1474, 1583
BclI TGATCA 3 cut(s) 556, 1300, 2001
BcoDI GTCTC 2 cut(s) 1890, 1959
BfaI CTAG 3 cut(s) 518, 1134, 1400
BfmI CTRYAG 5 cut(s) 363, 1335, 1445, 1518, 1656
BfrI CTTAAG 2 cut(s) 1193, 1214
BglII AGATCT 1 cut(s) 1875
BisI GCNGC 7 cut(s) 219, 664, 1161, 1373, 1761, 1989, 2085
BlsI GCNGC 7 cut(s) 220, 665, 1162, 1374, 1762, 1990, 2086
Bme1390I CCNGG 2 cut(s) 1474, 1583
Bme18I GGWCC 1 cut(s) 503
BmeT110I CYCGRG 1 cut(s) 1529
BmgBI CACGTC 1 cut(s) 1558
BmgT120I GGNCC 9 cut(s) 231, 276, 293, 325, 340, 442, 503, 761, 945
BmiI GGNNCC 4 cut(s) 505, 763, 1479, 2139
BmrFI CCNGG 2 cut(s) 1474, 1583
BmrI ACTGGG 2 cut(s) 300, 1717
BmsI GCATC 4 cut(s) 1060, 1120, 1359, 1411
BmuI ACTGGG 2 cut(s) 300, 1717
BpiI GAAGAC 3 cut(s) 902, 1011, 1677
BplI GAGNNNNNCTC 2 cut(s) 1553, 1585
BpmI CTGGAG 1 cut(s) 679
Bpu10I CCTNAGC 2 cut(s) 24, 1407
BpuEI CTTGAG 1 cut(s) 99
Bsa29I ATCGAT 1 cut(s) 1367
BsaBI GATNNNNATC 1 cut(s) 2000
BsaI GGTCTC 2 cut(s) 1890, 1959
BsaJI CCNNGG 4 cut(s) 877, 1309, 1473, 1798
Bse118I RCCGGY 1 cut(s) 1480
Bse1I ACTGG 4 cut(s) 248, 295, 984, 1712
Bse3DI GCAATG 1 cut(s) 1929
Bse8I GATNNNNATC 1 cut(s) 2000
BseBI CCWGG 2 cut(s) 1474, 1583
BseCI ATCGAT 1 cut(s) 1367
BseDI CCNNGG 4 cut(s) 877, 1309, 1473, 1798
BseGI GGATG 6 cut(s) 606, 685, 1135, 1190, 1319, 1847
BseJI GATNNNNATC 1 cut(s) 2000
BseMI GCAATG 1 cut(s) 1929
BseMII CTCAG 4 cut(s) 15, 779, 1238, 1398
BseNI ACTGG 4 cut(s) 248, 295, 984, 1712
BseRI GAGGAG 1 cut(s) 300
BseSI GKGCMC 1 cut(s) 1568
BseXI GCAGC 7 cut(s) 205, 650, 1147, 1359, 1747, 1975, 2096
BseYI CCCAGC 1 cut(s) 2034
BsgI GTGCAG 1 cut(s) 1934
BshFI GGCC 9 cut(s) 233, 270, 277, 295, 326, 342, 444, 762, 946
BshVI ATCGAT 1 cut(s) 1367
BsiHKAI GWGCWC 4 cut(s) 657, 1492, 1557, 1568
BsiHKCI CYCGRG 1 cut(s) 1529
BsiSI CCGG 1 cut(s) 1481
BsmAI GTCTC 2 cut(s) 1890, 1959
BsnI GGCC 9 cut(s) 233, 270, 277, 295, 326, 342, 444, 762, 946
Bso31I GGTCTC 2 cut(s) 1890, 1959
BsoBI CYCGRG 1 cut(s) 1529
Bsp1286I GDGCHC 5 cut(s) 657, 1492, 1557, 1568, 2116
Bsp1407I TGTACA 2 cut(s) 461, 1865
Bsp143I GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
Bsp19I CCATGG 2 cut(s) 877, 1309
BspACI CCGC 3 cut(s) 216, 279, 1958
BspANI GGCC 9 cut(s) 233, 270, 277, 295, 326, 342, 444, 762, 946
BspCNI CTCAG 4 cut(s) 16, 780, 1237, 1399
BspDI ATCGAT 1 cut(s) 1367
BspHI TCATGA 2 cut(s) 1539, 2058
BspLI GGNNCC 4 cut(s) 505, 763, 1479, 2139
BspMAI CTGCAG 3 cut(s) 367, 1339, 1449
BspPI GGATC 3 cut(s) 89, 1542, 1896
BspQI GCTCTTC 1 cut(s) 978
BspTI CTTAAG 2 cut(s) 1193, 1214
BspTNI GGTCTC 2 cut(s) 1890, 1959
BsrDI GCAATG 1 cut(s) 1929
BsrFI RCCGGY 1 cut(s) 1480
BsrGI TGTACA 2 cut(s) 461, 1865
BsrI ACTGG 4 cut(s) 248, 295, 984, 1712
BssAI RCCGGY 1 cut(s) 1480
BssECI CCNNGG 4 cut(s) 877, 1309, 1473, 1798
BssMI GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
BssT1I CCWWGG 2 cut(s) 877, 1309
Bst2UI CCWGG 2 cut(s) 1474, 1583
Bst4CI ACNGT 1 cut(s) 401
Bst6I CTCTTC 3 cut(s) 583, 978, 1343
BstAFI CTTAAG 2 cut(s) 1193, 1214
BstAPI GCANNNNNTGC 1 cut(s) 1064
BstAUI TGTACA 2 cut(s) 461, 1865
BstC8I GCNNGC 6 cut(s) 106, 123, 279, 944, 1158, 1765
BstDEI CTNAG 4 cut(s) 24, 788, 1224, 1407
BstDSI CCRYGG 2 cut(s) 877, 1309
BstENI CCTNNNNNAGG 2 cut(s) 102, 1890
BstF5I GGATG 6 cut(s) 606, 685, 1135, 1190, 1319, 1847
BstHHI GCGC 1 cut(s) 843
BstKTI GATC 8 cut(s) 97, 559, 1303, 1537, 1545, 1878, 1904, 2004
BstMAI GTCTC 2 cut(s) 1890, 1959
BstMBI GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
BstMWI GCNNNNNNNGC 8 cut(s) 127, 218, 711, 840, 1064, 1139, 1148, 1157
BstNI CCWGG 2 cut(s) 1474, 1583
BstNSI RCATGY 2 cut(s) 397, 2074
BstSCI CCNGG 2 cut(s) 1472, 1581
BstSFI CTRYAG 5 cut(s) 363, 1335, 1445, 1518, 1656
BstSLI GKGCMC 1 cut(s) 1568
BstV1I GCAGC 7 cut(s) 205, 650, 1147, 1359, 1747, 1975, 2096
BstV2I GAAGAC 3 cut(s) 902, 1011, 1677
BstX2I RGATCY 2 cut(s) 1534, 1875
BstXI CCANNNNNNTGG 1 cut(s) 657
BstYI RGATCY 2 cut(s) 1534, 1875
Bsu15I ATCGAT 1 cut(s) 1367
BsuRI GGCC 9 cut(s) 233, 270, 277, 295, 326, 342, 444, 762, 946
BsuTUI ATCGAT 1 cut(s) 1367
BtgI CCRYGG 2 cut(s) 877, 1309
BtrI CACGTC 1 cut(s) 1558
BtsCI GGATG 6 cut(s) 606, 685, 1135, 1190, 1319, 1847
BtsIMutI CAGTG 1 cut(s) 288
Cac8I GCNNGC 6 cut(s) 106, 123, 279, 944, 1158, 1765
CciI TCATGA 2 cut(s) 1539, 2058
CfoI GCGC 1 cut(s) 843
Cfr10I RCCGGY 1 cut(s) 1480
Cfr13I GGNCC 9 cut(s) 231, 276, 293, 325, 340, 442, 503, 761, 945
ClaI ATCGAT 1 cut(s) 1367
CseI GACGC 1 cut(s) 476
Csp6I GTAC 6 cut(s) 391, 397, 462, 1190, 1332, 1866
CviQI GTAC 6 cut(s) 391, 397, 462, 1190, 1332, 1866
DdeI CTNAG 4 cut(s) 24, 788, 1224, 1407
DpnI GATC 8 cut(s) 96, 558, 1302, 1536, 1544, 1877, 1903, 2003
DpnII GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
EaeI YGGCCR 1 cut(s) 268
Eam1104I CTCTTC 3 cut(s) 583, 978, 1343
EarI CTCTTC 3 cut(s) 583, 978, 1343
EciI GGCGGA 1 cut(s) 1973
Ecl136II GAGCTC 2 cut(s) 655, 1490
Eco130I CCWWGG 2 cut(s) 877, 1309
Eco24I GRGCYC 3 cut(s) 657, 1492, 2116
Eco31I GGTCTC 2 cut(s) 1890, 1959
Eco47I GGWCC 1 cut(s) 503
Eco53kI GAGCTC 2 cut(s) 655, 1490
Eco57I CTGAAG 1 cut(s) 32
Eco88I CYCGRG 1 cut(s) 1529
EcoICRI GAGCTC 2 cut(s) 655, 1490
EcoNI CCTNNNNNAGG 2 cut(s) 102, 1890
EcoO109I RGGNCCY 1 cut(s) 503
EcoRII CCWGG 2 cut(s) 1472, 1581
EcoT14I CCWWGG 2 cut(s) 877, 1309
EcoT38I GRGCYC 3 cut(s) 657, 1492, 2116
ErhI CCWWGG 2 cut(s) 877, 1309
FalI AAGNNNNNCTT 4 cut(s) 1140, 1172, 1340, 1372
FauI CCCGC 1 cut(s) 286
FauNDI CATATG 1 cut(s) 1076
FbaI TGATCA 3 cut(s) 556, 1300, 2001
FblI GTMKAC 2 cut(s) 199, 490
Fnu4HI GCNGC 7 cut(s) 219, 664, 1161, 1373, 1761, 1989, 2085
FokI GGATG 6 cut(s) 613, 672, 1142, 1197, 1326, 1854
FriOI GRGCYC 3 cut(s) 657, 1492, 2116
Fsp4HI GCNGC 7 cut(s) 219, 664, 1161, 1373, 1761, 1989, 2085
FspBI CTAG 3 cut(s) 518, 1134, 1400
GlaI GCGC 1 cut(s) 842
GluI GCNGC 7 cut(s) 219, 664, 1161, 1373, 1761, 1989, 2085
GsaI CCCAGC 1 cut(s) 2038
GsuI CTGGAG 1 cut(s) 679
HaeIII GGCC 9 cut(s) 233, 270, 277, 295, 326, 342, 444, 762, 946
HapII CCGG 1 cut(s) 1481
HgaI GACGC 1 cut(s) 476
HhaI GCGC 1 cut(s) 843
Hin6I GCGC 1 cut(s) 841
HinP1I GCGC 1 cut(s) 841
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 2 cut(s) 1149, 1341
HinfI GANTC 3 cut(s) 550, 1450, 1713
HpaII CCGG 1 cut(s) 1481
HphI GGTGA 6 cut(s) 41, 252, 395, 1259, 1403, 1973
Hpy166II GTNNAC 9 cut(s) 40, 200, 464, 491, 989, 1190, 1394, 1566, 1952
Hpy188I TCNGA 6 cut(s) 471, 962, 1170, 1300, 1327, 1748
Hpy8I GTNNAC 9 cut(s) 40, 200, 464, 491, 989, 1190, 1394, 1566, 1952
Hpy99I CGWCG 2 cut(s) 1391, 1562
HpyAV CCTTC 6 cut(s) 69, 494, 958, 961, 1251, 1886
HpyCH4III ACNGT 1 cut(s) 401
HpyCH4IV ACGT 1 cut(s) 1557
HpyF10VI GCNNNNNNNGC 8 cut(s) 127, 218, 711, 840, 1064, 1139, 1148, 1157
HpyF3I CTNAG 4 cut(s) 24, 788, 1224, 1407
HpySE526I ACGT 1 cut(s) 1557
HspAI GCGC 1 cut(s) 841
Ksp22I TGATCA 3 cut(s) 556, 1300, 2001
Kzo9I GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
LguI GCTCTTC 1 cut(s) 978
LmnI GCTCC 6 cut(s) 20, 660, 831, 1283, 1487, 1495
Lsp1109I GCAGC 7 cut(s) 205, 650, 1147, 1359, 1747, 1975, 2096
LweI GCATC 4 cut(s) 1060, 1120, 1359, 1411
MaeI CTAG 3 cut(s) 518, 1134, 1400
MaeII ACGT 1 cut(s) 1557
MaeIII GTNAC 4 cut(s) 401, 885, 1247, 2073
MalI GATC 8 cut(s) 96, 558, 1302, 1536, 1544, 1877, 1903, 2003
MboI GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
MfeI CAATTG 1 cut(s) 2012
MflI RGATCY 2 cut(s) 1534, 1875
MhlI GDGCHC 5 cut(s) 657, 1492, 1557, 1568, 2116
MlyI GAGTC 1 cut(s) 1459
MmeI TCCRAC 1 cut(s) 1482
MseI TTAA 6 cut(s) 171, 348, 1194, 1215, 1931, 1940
MslI CAYNNNNRTG 3 cut(s) 482, 564, 849
MspA1I CMGCKG 2 cut(s) 218, 281
MspCI CTTAAG 2 cut(s) 1193, 1214
MspI CCGG 1 cut(s) 1481
MspR9I CCNGG 2 cut(s) 1474, 1583
MunI CAATTG 1 cut(s) 2012
MvaI CCWGG 2 cut(s) 1474, 1583
MwoI GCNNNNNNNGC 8 cut(s) 127, 218, 711, 840, 1064, 1139, 1148, 1157
NcoI CCATGG 2 cut(s) 877, 1309
NdeI CATATG 1 cut(s) 1076
NdeII GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
NlaIV GGNNCC 4 cut(s) 505, 763, 1479, 2139
NmeAIII GCCGAG 2 cut(s) 151, 1823
NmuCI GTSAC 2 cut(s) 401, 1247
NspI RCATGY 2 cut(s) 397, 2074
PagI TCATGA 2 cut(s) 1539, 2058
PciI ACATGT 1 cut(s) 393
PciSI GCTCTTC 1 cut(s) 978
PfeI GAWTC 2 cut(s) 550, 1713
PflMI CCANNNNNTGG 1 cut(s) 1460
PkrI GCNGC 7 cut(s) 220, 665, 1162, 1374, 1762, 1990, 2086
PleI GAGTC 1 cut(s) 1458
PpsI GAGTC 1 cut(s) 1458
PpuMI RGGWCCY 1 cut(s) 503
PscI ACATGT 1 cut(s) 393
PshBI ATTAAT 1 cut(s) 1931
Psp124BI GAGCTC 2 cut(s) 657, 1492
Psp5II RGGWCCY 1 cut(s) 503
Psp6I CCWGG 2 cut(s) 1472, 1581
PspFI CCCAGC 1 cut(s) 2034
PspGI CCWGG 2 cut(s) 1472, 1581
PspN4I GGNNCC 4 cut(s) 505, 763, 1479, 2139
PspPI GGNCC 9 cut(s) 231, 276, 293, 325, 340, 442, 503, 761, 945
PspPPI RGGWCCY 1 cut(s) 503
PstI CTGCAG 3 cut(s) 367, 1339, 1449
PsuI RGATCY 2 cut(s) 1534, 1875
RsaI GTAC 6 cut(s) 392, 398, 463, 1191, 1333, 1867
RsaNI GTAC 6 cut(s) 391, 397, 462, 1190, 1332, 1866
RseI CAYNNNNRTG 3 cut(s) 482, 564, 849
SacI GAGCTC 2 cut(s) 657, 1492
SapI GCTCTTC 1 cut(s) 978
SaqAI TTAA 6 cut(s) 171, 348, 1194, 1215, 1931, 1940
SatI GCNGC 7 cut(s) 219, 664, 1161, 1373, 1761, 1989, 2085
Sau3AI GATC 8 cut(s) 94, 556, 1300, 1534, 1542, 1875, 1901, 2001
Sau96I GGNCC 9 cut(s) 231, 276, 293, 325, 340, 442, 503, 761, 945
SchI GAGTC 1 cut(s) 1459
ScrFI CCNGG 2 cut(s) 1474, 1583
SduI GDGCHC 5 cut(s) 657, 1492, 1557, 1568, 2116
SfaNI GCATC 4 cut(s) 1060, 1120, 1359, 1411
SfcI CTRYAG 5 cut(s) 363, 1335, 1445, 1518, 1656
SinI GGWCC 1 cut(s) 503
SmiMI CAYNNNNRTG 3 cut(s) 482, 564, 849
SmlI CTYRAG 3 cut(s) 114, 1193, 1214
SmoI CTYRAG 3 cut(s) 114, 1193, 1214
SsiI CCGC 3 cut(s) 216, 279, 1958
SspMI CTAG 3 cut(s) 518, 1134, 1400
SstI GAGCTC 2 cut(s) 657, 1492
StyD4I CCNGG 2 cut(s) 1472, 1581
StyI CCWWGG 2 cut(s) 877, 1309
TaaI ACNGT 1 cut(s) 401
TaiI ACGT 1 cut(s) 1560
TaqI TCGA 5 cut(s) 177, 1018, 1367, 1545, 1560
TaqII GACCGA 1 cut(s) 1914
TatI WGTACW 5 cut(s) 396, 461, 1189, 1331, 1865
TfiI GAWTC 2 cut(s) 550, 1713
Tru1I TTAA 6 cut(s) 171, 348, 1194, 1215, 1931, 1940
Tru9I TTAA 6 cut(s) 171, 348, 1194, 1215, 1931, 1940
TscAI CASTG 1 cut(s) 295
TseFI GTSAC 2 cut(s) 401, 1247
TseI GCWGC 7 cut(s) 218, 663, 1160, 1372, 1760, 1988, 2084
Tsp45I GTSAC 2 cut(s) 401, 1247
TspRI CASTG 1 cut(s) 295
Van91I CCANNNNNTGG 1 cut(s) 1460
Vha464I CTTAAG 2 cut(s) 1193, 1214
VneI GTGCAC 1 cut(s) 1564
VpaK11BI GGWCC 1 cut(s) 503
VspI ATTAAT 1 cut(s) 1931
XagI CCTNNNNNAGG 2 cut(s) 102, 1890
XapI RAATTY 4 cut(s) 145, 1069, 1523, 1808
XbaI TCTAGA 1 cut(s) 517
XceI RCATGY 2 cut(s) 397, 2074
XcmI CCANNNNNNNNNTGG 2 cut(s) 270, 413
XmiI GTMKAC 2 cut(s) 199, 490
XspI CTAG 3 cut(s) 518, 1134, 1400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.