Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000173

Physical Location & Seq

Genomic Coordinates Forward (+)

7830364 .. 7833182

Gene Structure 2819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0047000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1335 bp

ATGAGAGCGAGGTTAGGATTAGGAATTGCTAGGGATCTGAAGCAGCACATGAACAAGACATTATCATTTACCAGAAACAAATCTAGTTGTTCAGCAACAGCAGCAGCAGCAGCATCGGAGAAGAAGAAAGAGGAGGAAAAGTCGCTCTACATATATTTCAAGGAGGAGACAACTAGTAACAAGGGTGTTCATGACTGTAAACATCGCACGAGATTCCCTATCCGCTCCGTCAAACTGAGCTACTTGTTATCACCATCGTCATCGACCAAGACCAATATTGATGATGATCCCAACATCAGTGATGAAGTCTTGCCTGACTTGAGGGAAACTCGCCGTTTCAGAACCTGGGTTCGGTCCTCTCCCCACATGTTTTTCACTGCCCCTGCCCCAAGAGGAGGAGGCCCCGCATTTCCACGATCCTATGCTTCCCAGATTTGTTCGTTACGGAGCAAGGCCAAGGTACTCAACAAAAATTTCCCGGTGATTAAGCGTATGAAGAAAAATAAAGATGAGTTGCTATTTCTCGAGGAGGAGCTGCCGGCGGACGGCAAACTCTATTGTCTCTCCGCCAATACCTTTGTTGAAGACAGTCAAGTTTTCCAGGTTTTGGATACCAAGTCGAAGAAATGGTTATCTCTAGAGGCGCCTCCAGGTACCCGACCCAGCCGCAGCCTCTGCTTCAGGTCTGCAGTTTTCGGCACCAAAGTCTTACTCTGGTACGAAAATAATGTTGGAGTTTATTGTTTTGATGTCACCCAACCGGAGAAAGGATGGTCATCGACCCCACCATCGTTGGGAAACTGCATTCCCTTTCTCAATTGCAGGTCCCCTTTTGTTCTTGAGCATGATAGTAATAACAATTTTCTTATGTTCACCTTTGATCCCGTAGCACATGATCACCCTGTAAAAGTCTTCCTCATGTCTCATCCATGTGATACATTGCAACCCCTGAACCAACCTCTGCAATTTCCAGAGGTCCCAGATATGCCTTCTAACTTTTGGAATGAATATCCCCTTCACTATGAATTTGTCCATCTAGGAGGTCAAAAAATCTGCCTTGTTTTGCAGAAATTCTTCTACATTTTGGAAACGCATACTATTCCTGGTTATCAACATATGTCTCTGCCTCAGTTGGAGGAGATTTCTTTTCGTGGCAGAAACAAGGGGAATCTTATTCTCATAACATTTGAATATGAAATTAACTTCGAATCTTTGGACATAGAGTACCGTGTGCTCACTACTCGCCACCTTGAATACACTGGGAAGCGGGATCCTAAGAGCGAATTTTCTACATTTACCACACGCTCAATGCTAGCTGGTGCTACTGTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0019742 GO:0019745 GO:0031559 GO:0042300 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00909 ko01110 map00909 map01110

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

444

Amino Acids

50.88

Weight (kDa)

8.92

Isoelectric Point (pI)

59.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca	FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica	MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica	Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis	pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis	RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata	RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora	Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii	Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa	Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha	Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana	Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	813
Acc65I	GGTACC	1 cut(s)	653
AccB1I	GGYRCC	3 cut(s)	643, 653, 698
AccB7I	CCANNNNNTGG	1 cut(s)	607
AccBSI	CCGCTC	1 cut(s)	225
AciI	CCGC	6 cut(s)	223, 405, 542, 567, 667, 1267
AclWI	GGATC	6 cut(s)	42, 281, 411, 875, 1265, 1278
AcsI	RAATTY	4 cut(s)	472, 1025, 1070, 1283
AcuI	CTGAAG	2 cut(s)	59, 664
AcyI	GRCGYC	1 cut(s)	644
AfaI	GTAC	4 cut(s)	462, 655, 719, 1226
AfiI	CCNNNNNNNGG	6 cut(s)	351, 395, 545, 607, 767, 794
AflIII	ACRYGT	1 cut(s)	366
AgsI	TTSAA	4 cut(s)	160, 584, 1190, 1253
AhlI	ACTAGT	1 cut(s)	173
AjnI	CCWGG	4 cut(s)	344, 600, 649, 1102
AjuI	GAANNNNNNNTTGG	2 cut(s)	714, 746
AluBI	AGCT	3 cut(s)	240, 535, 1316
AluI	AGCT	3 cut(s)	240, 535, 1316
Alw21I	GWGCWC	2 cut(s)	1236, 1332
Alw26I	GTCTC	4 cut(s)	161, 566, 927, 1125
AlwI	GGATC	6 cut(s)	42, 281, 411, 875, 1265, 1278
AlwNI	CAGNNNCTG	2 cut(s)	345, 675
Ama87I	CYCGRG	1 cut(s)	524
AoxI	GGCC	2 cut(s)	400, 453
ApeKI	GCWGC	7 cut(s)	43, 101, 104, 107, 110, 535, 669
ApoI	RAATTY	4 cut(s)	472, 1025, 1070, 1283
Asp700I	GAANNNNTTC	1 cut(s)	1073
Asp718I	GGTACC	1 cut(s)	653
AspLEI	GCGC	1 cut(s)	646
AspS9I	GGNCC	4 cut(s)	354, 401, 825, 976
AsuC2I	CCSGG	1 cut(s)	479
AsuHPI	GGTGA	5 cut(s)	243, 493, 745, 865, 890
AsuII	TTCGAA	1 cut(s)	1206
AsuNHI	GCTAGC	1 cut(s)	1312
AvaI	CYCGRG	1 cut(s)	524
AvaII	GGWCC	3 cut(s)	354, 825, 976
BamHI	GGATCC	1 cut(s)	1270
BanI	GGYRCC	3 cut(s)	643, 653, 698
BauI	CACGAG	1 cut(s)	208
BbsI	GAAGAC	2 cut(s)	591, 904
Bbv12I	GWGCWC	2 cut(s)	1236, 1332
BbvI	GCAGC	7 cut(s)	55, 113, 116, 119, 122, 522, 681
BccI	CCATC	4 cut(s)	262, 765, 796, 1041
BceAI	ACGGC	2 cut(s)	318, 562
BcgI	CGANNNNNNTGC	2 cut(s)	96, 130
BciT130I	CCWGG	4 cut(s)	346, 602, 651, 1104
BciVI	GTATCC	1 cut(s)	604
BclI	TGATCA	1 cut(s)	895
BcnI	CCSGG	1 cut(s)	479
BcoDI	GTCTC	4 cut(s)	161, 566, 927, 1125
BcuI	ACTAGT	1 cut(s)	173
BfaI	CTAG	6 cut(s)	30, 84, 174, 638, 1037, 1313
BfmI	CTRYAG	1 cut(s)	687
BfoI	RGCGCY	1 cut(s)	647
BfuAI	ACCTGC	1 cut(s)	813
BfuI	GTATCC	1 cut(s)	604
BisI	GCNGC	8 cut(s)	44, 102, 105, 108, 111, 536, 667, 670
BlsI	GCNGC	8 cut(s)	45, 103, 106, 109, 112, 537, 668, 671
Bme1390I	CCNGG	5 cut(s)	346, 479, 602, 651, 1104
Bme18I	GGWCC	3 cut(s)	354, 825, 976
BmeT110I	CYCGRG	1 cut(s)	524
BmgT120I	GGNCC	4 cut(s)	354, 401, 825, 976
BmiI	GGNNCC	7 cut(s)	403, 645, 655, 700, 827, 978, 1272
BmrFI	CCNGG	5 cut(s)	346, 479, 602, 651, 1104
BmrI	ACTGGG	1 cut(s)	1269
BmsI	GCATC	1 cut(s)	122
BmtI	GCTAGC	1 cut(s)	1316
BmuI	ACTGGG	1 cut(s)	1269
BpiI	GAAGAC	2 cut(s)	591, 904
BplI	GAGNNNNNCTC	2 cut(s)	313, 345
BpmI	CTGGAG	1 cut(s)	633
Bpu14I	TTCGAA	1 cut(s)	1206
BpuEI	CTTGAG	2 cut(s)	340, 860
BpuMI	CCSGG	1 cut(s)	479
BsaBI	GATNNNNATC	2 cut(s)	285, 775
BsaHI	GRCGYC	1 cut(s)	644
BsaJI	CCNNGG	2 cut(s)	345, 456
BsaWI	WCCGGW	1 cut(s)	760
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	6 cut(s)	351, 395, 545, 607, 767, 794
Bse118I	RCCGGY	1 cut(s)	538
Bse1I	ACTGG	1 cut(s)	1264
Bse3DI	GCAATG	1 cut(s)	938
Bse8I	GATNNNNATC	2 cut(s)	285, 775
BseBI	CCWGG	4 cut(s)	346, 602, 651, 1104
BseDI	CCNNGG	2 cut(s)	345, 456
BseGI	GGATG	2 cut(s)	776, 925
BseJI	GATNNNNATC	2 cut(s)	285, 775
BseLI	CCNNNNNNNGG	6 cut(s)	351, 395, 545, 607, 767, 794
BseMI	GCAATG	1 cut(s)	938
BseMII	CTCAG	2 cut(s)	227, 1142
BseNI	ACTGG	1 cut(s)	1264
BseRI	GAGGAG	7 cut(s)	146, 179, 408, 411, 542, 545, 1151
BseXI	GCAGC	7 cut(s)	55, 113, 116, 119, 122, 522, 681
BseYI	CCCAGC	1 cut(s)	662
BshFI	GGCC	2 cut(s)	402, 455
BshNI	GGYRCC	3 cut(s)	643, 653, 698
BsiHKAI	GWGCWC	2 cut(s)	1236, 1332
BsiHKCI	CYCGRG	1 cut(s)	524
BsiSI	CCGG	3 cut(s)	479, 539, 761
BslFI	GGGAC	2 cut(s)	811, 962
BslI	CCNNNNNNNGG	6 cut(s)	351, 395, 545, 607, 767, 794
BsmAI	GTCTC	4 cut(s)	161, 566, 927, 1125
BsmFI	GGGAC	2 cut(s)	811, 962
BsmI	GAATGC	1 cut(s)	804
BsnI	GGCC	2 cut(s)	402, 455
BsoBI	CYCGRG	1 cut(s)	524
Bsp119I	TTCGAA	1 cut(s)	1206
Bsp1286I	GDGCHC	2 cut(s)	1236, 1332
Bsp143I	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
BspACI	CCGC	6 cut(s)	223, 405, 542, 567, 667, 1267
BspANI	GGCC	2 cut(s)	402, 455
BspCNI	CTCAG	2 cut(s)	228, 1141
BspHI	TCATGA	1 cut(s)	190
BspLI	GGNNCC	7 cut(s)	403, 645, 655, 700, 827, 978, 1272
BspMAI	CTGCAG	1 cut(s)	691
BspMI	ACCTGC	1 cut(s)	813
BspOI	GCTAGC	1 cut(s)	1316
BspPI	GGATC	6 cut(s)	42, 281, 411, 875, 1265, 1278
BspT104I	TTCGAA	1 cut(s)	1206
BspT107I	GGYRCC	3 cut(s)	643, 653, 698
BsrBI	CCGCTC	1 cut(s)	225
BsrDI	GCAATG	1 cut(s)	938
BsrFI	RCCGGY	1 cut(s)	538
BsrI	ACTGG	1 cut(s)	1264
BssAI	RCCGGY	1 cut(s)	538
BssECI	CCNNGG	2 cut(s)	345, 456
BssMI	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
BssNI	GRCGYC	1 cut(s)	644
BssSI	CACGAG	1 cut(s)	208
BssT1I	CCWWGG	1 cut(s)	456
Bst2BI	CACGAG	1 cut(s)	208
Bst2UI	CCWGG	4 cut(s)	346, 602, 651, 1104
Bst4CI	ACNGT	4 cut(s)	197, 590, 1229, 1327
BstACI	GRCGYC	1 cut(s)	644
BstAPI	GCANNNNNTGC	1 cut(s)	675
BstBI	TTCGAA	1 cut(s)	1206
BstC8I	GCNNGC	2 cut(s)	540, 1314
BstDEI	CTNAG	3 cut(s)	236, 1128, 1275
BstF5I	GGATG	2 cut(s)	776, 925
BstH2I	RGCGCY	1 cut(s)	647
BstHHI	GCGC	1 cut(s)	646
BstKTI	GATC	6 cut(s)	37, 289, 419, 883, 898, 1273
BstMAI	GTCTC	4 cut(s)	161, 566, 927, 1125
BstMBI	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
BstMWI	GCNNNNNNNGC	4 cut(s)	101, 107, 110, 675
BstNI	CCWGG	4 cut(s)	346, 602, 651, 1104
BstNSI	RCATGY	1 cut(s)	370
BstSCI	CCNGG	5 cut(s)	344, 477, 600, 649, 1102
BstSFI	CTRYAG	1 cut(s)	687
BstV1I	GCAGC	7 cut(s)	55, 113, 116, 119, 122, 522, 681
BstV2I	GAAGAC	2 cut(s)	591, 904
BstX2I	RGATCY	2 cut(s)	34, 1270
BstYI	RGATCY	2 cut(s)	34, 1270
BsuI	GTATCC	1 cut(s)	604
BsuRI	GGCC	2 cut(s)	402, 455
BtgZI	GCGATG	1 cut(s)	188
BtsCI	GGATG	2 cut(s)	776, 925
BtsI	GCAGTG	1 cut(s)	375
BtsIMutI	CAGTG	3 cut(s)	304, 375, 1257
BveI	ACCTGC	1 cut(s)	813
Cac8I	GCNNGC	2 cut(s)	540, 1314
CaiI	CAGNNNCTG	2 cut(s)	345, 675
CciI	TCATGA	1 cut(s)	190
CfoI	GCGC	1 cut(s)	646
Cfr10I	RCCGGY	1 cut(s)	538
Cfr13I	GGNCC	4 cut(s)	354, 401, 825, 976
Csp6I	GTAC	4 cut(s)	461, 654, 718, 1225
CspCI	CAANNNNNGTGG	2 cut(s)	774, 809
CviAII	CATG	7 cut(s)	49, 191, 367, 845, 893, 919, 930
CviJI	RGCY	7 cut(s)	240, 402, 455, 535, 666, 672, 1316
CviKI_1	RGCY	7 cut(s)	240, 402, 455, 535, 666, 672, 1316
CviQI	GTAC	4 cut(s)	461, 654, 718, 1225
DdeI	CTNAG	3 cut(s)	236, 1128, 1275
DinI	GGCGCC	1 cut(s)	645
DpnI	GATC	6 cut(s)	36, 288, 418, 882, 897, 1272
DpnII	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
EciI	GGCGGA	2 cut(s)	556, 557
Eco130I	CCWWGG	1 cut(s)	456
Eco47I	GGWCC	3 cut(s)	354, 825, 976
Eco57I	CTGAAG	2 cut(s)	59, 664
Eco88I	CYCGRG	1 cut(s)	524
EcoO109I	RGGNCCY	3 cut(s)	401, 825, 976
EcoRII	CCWGG	4 cut(s)	344, 600, 649, 1102
EcoT14I	CCWWGG	1 cut(s)	456
EgeI	GGCGCC	1 cut(s)	645
EheI	GGCGCC	1 cut(s)	645
ErhI	CCWWGG	1 cut(s)	456
FaeI	CATG	7 cut(s)	52, 194, 370, 848, 896, 922, 933
FaqI	GGGAC	2 cut(s)	811, 962
FatI	CATG	7 cut(s)	48, 190, 366, 844, 892, 918, 929
FauI	CCCGC	2 cut(s)	412, 1260
FauNDI	CATATG	1 cut(s)	1116
FbaI	TGATCA	1 cut(s)	895
Fnu4HI	GCNGC	8 cut(s)	44, 102, 105, 108, 111, 536, 667, 670
FokI	GGATG	2 cut(s)	783, 912
Fsp4HI	GCNGC	8 cut(s)	44, 102, 105, 108, 111, 536, 667, 670
FspBI	CTAG	6 cut(s)	30, 84, 174, 638, 1037, 1313
GlaI	GCGC	1 cut(s)	645
GluI	GCNGC	8 cut(s)	44, 102, 105, 108, 111, 536, 667, 670
GsaI	CCCAGC	1 cut(s)	666
GsuI	CTGGAG	1 cut(s)	633
HaeII	RGCGCY	1 cut(s)	647
HaeIII	GGCC	2 cut(s)	402, 455
HapII	CCGG	3 cut(s)	479, 539, 761
HhaI	GCGC	1 cut(s)	646
Hin1I	GRCGYC	1 cut(s)	644
Hin1II	CATG	7 cut(s)	52, 194, 370, 848, 896, 922, 933
Hin6I	GCGC	1 cut(s)	644
HinP1I	GCGC	1 cut(s)	644
HinfI	GANTC	3 cut(s)	213, 1168, 1208
HpaII	CCGG	3 cut(s)	479, 539, 761
HphI	GGTGA	5 cut(s)	243, 493, 745, 865, 890
Hpy166II	GTNNAC	2 cut(s)	200, 873
Hpy188I	TCNGA	3 cut(s)	39, 118, 341
Hpy188III	TCNNGA	5 cut(s)	191, 524, 638, 839, 971
Hpy8I	GTNNAC	2 cut(s)	200, 873
HpyAV	CCTTC	2 cut(s)	999, 1025
HpyCH4III	ACNGT	4 cut(s)	197, 590, 1229, 1327
HpyCH4V	TGCA	6 cut(s)	689, 804, 822, 943, 964, 1066
HpyF10VI	GCNNNNNNNGC	4 cut(s)	101, 107, 110, 675
HpyF3I	CTNAG	3 cut(s)	236, 1128, 1275
Hsp92I	GRCGYC	1 cut(s)	644
Hsp92II	CATG	7 cut(s)	52, 194, 370, 848, 896, 922, 933
HspAI	GCGC	1 cut(s)	644
KasI	GGCGCC	1 cut(s)	643
KpnI	GGTACC	1 cut(s)	657
KroI	GCCGGC	1 cut(s)	538
KroNI	GCCGGC	1 cut(s)	540
Ksp22I	TGATCA	1 cut(s)	895
Kzo9I	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
LmnI	GCTCC	3 cut(s)	230, 447, 532
Lsp1109I	GCAGC	7 cut(s)	55, 113, 116, 119, 122, 522, 681
LweI	GCATC	1 cut(s)	122
MaeI	CTAG	6 cut(s)	30, 84, 174, 638, 1037, 1313
MaeIII	GTNAC	3 cut(s)	176, 441, 751
MalI	GATC	6 cut(s)	36, 288, 418, 882, 897, 1272
MbiI	CCGCTC	1 cut(s)	225
MboI	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
MboII	GAAGA	7 cut(s)	133, 136, 508, 596, 634, 904, 1066
MfeI	CAATTG	1 cut(s)	817
MflI	RGATCY	2 cut(s)	34, 1270
MhlI	GDGCHC	2 cut(s)	1236, 1332
MluCI	AATT	9 cut(s)	24, 472, 817, 859, 965, 1025, 1070, 1197, 1283
Mly113I	GGCGCC	1 cut(s)	644
MmeI	TCCRAC	2 cut(s)	712, 1113
MroNI	GCCGGC	1 cut(s)	538
MroXI	GAANNNNTTC	1 cut(s)	1073
MseI	TTAA	2 cut(s)	486, 1200
MslI	CAYNNNNRTG	1 cut(s)	930
MspI	CCGG	3 cut(s)	479, 539, 761
MspR9I	CCNGG	5 cut(s)	346, 479, 602, 651, 1104
MunI	CAATTG	1 cut(s)	817
Mva1269I	GAATGC	1 cut(s)	804
MvaI	CCWGG	4 cut(s)	346, 602, 651, 1104
MwoI	GCNNNNNNNGC	4 cut(s)	101, 107, 110, 675
NaeI	GCCGGC	1 cut(s)	540
NarI	GGCGCC	1 cut(s)	644
NciI	CCSGG	1 cut(s)	479
NdeI	CATATG	1 cut(s)	1116
NdeII	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
NgoMIV	GCCGGC	1 cut(s)	538
NheI	GCTAGC	1 cut(s)	1312
NlaIII	CATG	7 cut(s)	52, 194, 370, 848, 896, 922, 933
NlaIV	GGNNCC	7 cut(s)	403, 645, 655, 700, 827, 978, 1272
NmuCI	GTSAC	1 cut(s)	751
NspI	RCATGY	1 cut(s)	370
NspV	TTCGAA	1 cut(s)	1206
PaeR7I	CTCGAG	1 cut(s)	524
PagI	TCATGA	1 cut(s)	190
PciI	ACATGT	1 cut(s)	366
PctI	GAATGC	1 cut(s)	804
PdiI	GCCGGC	1 cut(s)	540
PdmI	GAANNNNTTC	1 cut(s)	1073
PfeI	GAWTC	3 cut(s)	213, 1168, 1208
PflMI	CCANNNNNTGG	1 cut(s)	607
PkrI	GCNGC	8 cut(s)	45, 103, 106, 109, 112, 537, 668, 671
PluTI	GGCGCC	1 cut(s)	647
PpuMI	RGGWCCY	2 cut(s)	825, 976
PscI	ACATGT	1 cut(s)	366
Psp5II	RGGWCCY	2 cut(s)	825, 976
Psp6I	CCWGG	4 cut(s)	344, 600, 649, 1102
PspFI	CCCAGC	1 cut(s)	662
PspGI	CCWGG	4 cut(s)	344, 600, 649, 1102
PspN4I	GGNNCC	7 cut(s)	403, 645, 655, 700, 827, 978, 1272
PspPI	GGNCC	4 cut(s)	354, 401, 825, 976
PspPPI	RGGWCCY	2 cut(s)	825, 976
PstI	CTGCAG	1 cut(s)	691
PstNI	CAGNNNCTG	2 cut(s)	345, 675
PsuI	RGATCY	2 cut(s)	34, 1270
RsaI	GTAC	4 cut(s)	462, 655, 719, 1226
RsaNI	GTAC	4 cut(s)	461, 654, 718, 1225
RseI	CAYNNNNRTG	1 cut(s)	930
SaqAI	TTAA	2 cut(s)	486, 1200
SatI	GCNGC	8 cut(s)	44, 102, 105, 108, 111, 536, 667, 670
Sau3AI	GATC	6 cut(s)	34, 286, 416, 880, 895, 1270
Sau96I	GGNCC	4 cut(s)	354, 401, 825, 976
ScrFI	CCNGG	5 cut(s)	346, 479, 602, 651, 1104
SduI	GDGCHC	2 cut(s)	1236, 1332
SfaNI	GCATC	1 cut(s)	122
SfcI	CTRYAG	1 cut(s)	687
SfoI	GGCGCC	1 cut(s)	645
Sfr274I	CTCGAG	1 cut(s)	524
SfuI	TTCGAA	1 cut(s)	1206
SinI	GGWCC	3 cut(s)	354, 825, 976
SlaI	CTCGAG	1 cut(s)	524
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	3 cut(s)	319, 524, 839
SmoI	CTYRAG	3 cut(s)	319, 524, 839
SpeI	ACTAGT	1 cut(s)	173
Sse9I	AATT	9 cut(s)	24, 472, 817, 859, 965, 1025, 1070, 1197, 1283
SsiI	CCGC	6 cut(s)	223, 405, 542, 567, 667, 1267
SspDI	GGCGCC	1 cut(s)	643
SspI	AATATT	1 cut(s)	277
SspMI	CTAG	6 cut(s)	30, 84, 174, 638, 1037, 1313
StyD4I	CCNGG	5 cut(s)	344, 477, 600, 649, 1102
StyI	CCWWGG	1 cut(s)	456
TaaI	ACNGT	4 cut(s)	197, 590, 1229, 1327
TaqI	TCGA	5 cut(s)	263, 525, 620, 779, 1206
TaqII	GACCGA	1 cut(s)	342
TasI	AATT	9 cut(s)	24, 472, 817, 859, 965, 1025, 1070, 1197, 1283
TauI	GCSGC	1 cut(s)	669
TfiI	GAWTC	3 cut(s)	213, 1168, 1208
Tru1I	TTAA	2 cut(s)	486, 1200
Tru9I	TTAA	2 cut(s)	486, 1200
TscAI	CASTG	3 cut(s)	304, 382, 1264
TseFI	GTSAC	1 cut(s)	751
TseI	GCWGC	7 cut(s)	43, 101, 104, 107, 110, 535, 669
Tsp45I	GTSAC	1 cut(s)	751
TspDTI	ATGAA	7 cut(s)	65, 179, 318, 509, 1020, 1038, 1209
TspGWI	ACGGA	2 cut(s)	217, 460
TspRI	CASTG	3 cut(s)	304, 382, 1264
Van91I	CCANNNNNTGG	1 cut(s)	607
VpaK11BI	GGWCC	3 cut(s)	354, 825, 976
XapI	RAATTY	4 cut(s)	472, 1025, 1070, 1283
XbaI	TCTAGA	1 cut(s)	637
XceI	RCATGY	1 cut(s)	370
XhoI	CTCGAG	1 cut(s)	524
XmnI	GAANNNNTTC	1 cut(s)	1073
XspI	CTAG	6 cut(s)	30, 84, 174, 638, 1037, 1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.