pycom09g08590

Belongs to the terpene cyclase mutase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
6616251 .. 6622572
6322 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g08590.4

Sequence Viewer

Length: 2286 bp
ATGTGGAAGCTTAAGGTCGCAGATGGTGGCAATGATCCATACATCTACAGCACAAACAACTTCGTGGGAAGGCAGATATTTGAGTTTGACCCTGAAGCAGGAACTACCGAAGAGCGAGCTGAGGTGGAAGAAGCTCGTCTTCATTTCTACAATAACCGCCATCAGGTTAAGCCCAGTGGTGACCTCCTATGGCGAATGCAGTTCCTAAGGGAGAAAAACTTCAAACAGACAATTCCCCCAGTTAAAATTGAGGATGGAGAGGAAATCACACACGAAAAGGCCACAGCTTCATTGAGAAGGTCTATCCACTTGTTTTCAGCGTTGCAGGCTAGCGATGGCCATTGGCCTGCCGAAAATGCTGGCCCGTTGTTTTTCCTTCCTCCATTGGTCATGTGTGTTTACATTACAGGGCATCTTAACACTGTATTCCATGCAGAACACCGCAAAGAAATTATGCGTTACATATACTATCATCAGAACCAAGATGGTGGTTGGGGATTTCACATTGAAGGACACAGCACCATGTTCTGCACAGCTCTCAGCTACATTTGTATGCGTATTCTTGGAGAAGGATCCGATGGTGGCCAAGACAATGCTTGTGCAAGAGCTAGAAAGTGGATTCTTGATCATGGCAGTGTTACCCACATCCCCTCATGGGGTAAAACTTGGCTTTCGATACTTGGTGTGTTTGAGTGGTCCGGAAGCAACCCAATGCCCCCAGAGTTTTGGATTCTGCCTTCATTTCTTCCTATACATCCAGCAAAAATGTGGTGCTACTGTAGGATGGTTTACATGCCTATGTCATATTTATATGGGAAAAGATTTGTTGGTCCCATCACACCTCTCATACTACAATTAAGGGAAGAACTCCATGCTCAGCCTTACGACGAAATTAACTGGAATGGAGTGCGTCATCACTGTGCTAAAGAGGACATCTACTACCCTCATCCATGGATACAGGACTTTCTATGGGATAGTCTGTACATATGTACGGAGCCTCTTCTTACACGCTGGCCATTTAACAAGCTGATCAGGAAAAGGGCTCTCGAAGTAGCAATGGAGCATATTCATTATGAAGATGAAAACAGCAGATACATTACCATTGGAAGTGTAGAAAAGGCGTTATGCATGATGGCTTGTTGGGCTGAAGACCCAAATGGTGATTATTTTAAAAAGCATCTTGCCAGGATACCAGATTATTTATGGGTTGCTGAGGATGGGATGAAGATGCAAAGTTTTGGCAGTCAAATGTGGGATGCTGGTTTTGCCATTCAAGCTTTACTTGCTTCCAATCTAACCGATGAAATTGCACCCACACTTGCTAGAGGACATGACTTCGTCAAGAAATCTCAGGTTAAGGACAATCCATCGGGTGACTTCAAAAGTATGCACCGCCACATTTCCAAAGGATCGTGGACTTTCTCTGATCAAGACCATGGATGGCAACTTTCTGATTGCACTGCAGAGGGTATAAAGTGTTGCCTGCTTTTATCGATGATGCCACCGGAGCTGGTTGGTGAAAAAATGGAACCTGAGTGGTTATACGAGGCTGTCAATGTCCTAATTTACCTACAGAGTAAAAATGGTGGTTTAGGAGTCTGGGAACGAGCTGGAGCAGCAAAATGGTTAGAAATGTTGAATCCCACGGAATTCTTCATAGACATTGTTCTTGAGCATGAATATCTTGAGTGCACTGCAGCTGCAATTCAGGCTATGGTTTTGTTTAAGAAGTTGTACCCTGGCCACAGGAAGAAAGAGACAGATCAATTTATTACCAATGCAGCACAGTACGTTGAAAATACACAAATGGAAGATGGTTCATGGTACGGGAATTGGGGTGTTTGCTTCACATATGGTACCTGGTTTGCTCTTGGAGGGTTAACAGCTGCTGGCAAGACTTTCAACAATTGTGCAGTTATACGCAAAGCTGTTAGTTTTTTACTCACAATGCAGAATGAGAACGGTGGTTGGGGAGAGAGCTACCTTTCATGTCCAAAAAGGGAGTACGTTCCTCTTGAAGGAAACCGATCAAATTTAGTACAGACAGCTTGGGCTATGATGGGTTTGATTTATGCAGGACAGGCCGAAAGAGACCCCGCACCTCTTCATCGTGCAGCAAAGTTGATAATCAACTCTCAGTTGGAAAATGGTGACTTTCCTCAGCAGGAAATCGCTGGAGTGTTCAAGATGAATTGTATGCTACATTATCCAACTTATAGAAACATCTTCCCCCTGTGGGCTCTTGCAGAATACCGCAAGTGGGTTCCATTGCCTCCCAAAGCGTGA

Protein Analysis

762

Amino Acids

87.51

Weight (kDa)

6.04

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1856
AccB1I GGYRCC 1 cut(s) 1856
AccIII TCCGGA 1 cut(s) 698
AciI CCGC 5 cut(s) 157, 442, 1393, 2097, 2254
AclWI GGATC 4 cut(s) 29, 567, 580, 1417
AcoI YGGCCR 4 cut(s) 337, 583, 1013, 1741
AcsI RAATTY 2 cut(s) 1649, 2032
AcuI CTGAAG 2 cut(s) 114, 1167
AfaI GTAC 8 cut(s) 983, 991, 1736, 1790, 1826, 1858, 2006, 2040
AfiI CCNNNNNNNGG 7 cut(s) 98, 163, 655, 656, 2018, 2236, 2260
AflII CTTAAG 1 cut(s) 11
AgsI TTSAA 9 cut(s) 223, 509, 1274, 1381, 1639, 1796, 1903, 2018, 2185
AjnI CCWGG 3 cut(s) 1184, 1738, 1859
Alw21I GWGCWC 1 cut(s) 1694
Alw26I GTCTC 2 cut(s) 1751, 2085
Alw44I GTGCAC 1 cut(s) 1690
AlwI GGATC 4 cut(s) 29, 567, 580, 1417
AlwNI CAGNNNCTG 1 cut(s) 1889
Aor13HI TCCGGA 1 cut(s) 698
AoxI GGCC 8 cut(s) 279, 337, 344, 361, 583, 1013, 1741, 2082
ApaLI GTGCAC 1 cut(s) 1690
ApeKI GCWGC 6 cut(s) 1616, 1697, 1700, 1781, 1886, 2114
ApoI RAATTY 2 cut(s) 1649, 2032
Asp700I GAANNNNTTC 1 cut(s) 218
Asp718I GGTACC 1 cut(s) 1856
AspS9I GGNCC 3 cut(s) 362, 696, 830
AsuHPI GGTGA 5 cut(s) 191, 1172, 1385, 1529, 2162
AsuNHI GCTAGC 1 cut(s) 329
AvaII GGWCC 2 cut(s) 696, 830
AxyI CCTNAGG 1 cut(s) 206
BaeGI GKGCMC 1 cut(s) 1694
BalI TGGCCA 4 cut(s) 339, 585, 1015, 1743
BamHI GGATCC 1 cut(s) 572
BanI GGYRCC 1 cut(s) 1856
BanII GRGCYC 2 cut(s) 1045, 2242
BbsI GAAGAC 2 cut(s) 131, 1155
Bbv12I GWGCWC 1 cut(s) 1694
BbvCI CCTCAGC 3 cut(s) 120, 1212, 2160
BbvI GCAGC 6 cut(s) 1628, 1687, 1709, 1793, 1873, 2126
BcgI CGANNNNNNTGC 2 cut(s) 1289, 1323
BciT130I CCWGG 3 cut(s) 1186, 1740, 1861
BciVI GTATCC 2 cut(s) 948, 1182
BclI TGATCA 3 cut(s) 625, 1029, 1426
BcoDI GTCTC 2 cut(s) 1751, 2085
BfaI CTAG 3 cut(s) 330, 609, 1323
BfmI CTRYAG 5 cut(s) 46, 778, 1461, 1571, 1695
BfrI CTTAAG 1 cut(s) 11
BfuI GTATCC 2 cut(s) 948, 1182
BisI GCNGC 6 cut(s) 1617, 1698, 1701, 1782, 1887, 2115
BlpI GCTNAGC 1 cut(s) 876
BlsI GCNGC 6 cut(s) 1618, 1699, 1702, 1783, 1888, 2116
Bme1390I CCNGG 3 cut(s) 1186, 1740, 1861
Bme18I GGWCC 2 cut(s) 696, 830
BmgT120I GGNCC 3 cut(s) 362, 696, 830
BmiI GGNNCC 6 cut(s) 574, 832, 996, 1530, 1858, 2265
BmrFI CCNGG 3 cut(s) 1186, 1740, 1861
BmrI ACTGGG 2 cut(s) 168, 233
BmsI GCATC 5 cut(s) 421, 1186, 1218, 1246, 1488
BmtI GCTAGC 1 cut(s) 333
BmuI ACTGGG 2 cut(s) 168, 233
BpiI GAAGAC 2 cut(s) 131, 1155
BpmI CTGGAG 2 cut(s) 1632, 2196
Bpu10I CCTNAGC 3 cut(s) 120, 1212, 2160
Bpu1102I GCTNAGC 1 cut(s) 876
BpuEI CTTGAG 2 cut(s) 1691, 1706
Bsa29I ATCGAT 1 cut(s) 1493
BsaI GGTCTC 1 cut(s) 2085
BsaJI CCNNGG 4 cut(s) 950, 1435, 1644, 1738
BsaWI WCCGGW 2 cut(s) 698, 1504
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 163, 655, 656, 2018, 2236, 2260
Bse1I ACTGG 3 cut(s) 174, 239, 902
Bse21I CCTNAGG 1 cut(s) 206
Bse3DI GCAATG 3 cut(s) 37, 1062, 2267
BseAI TCCGGA 1 cut(s) 698
BseBI CCWGG 3 cut(s) 1186, 1740, 1861
BseCI ATCGAT 1 cut(s) 1493
BseDI CCNNGG 4 cut(s) 950, 1435, 1644, 1738
BseGI GGATG 9 cut(s) 259, 645, 754, 789, 946, 1222, 1227, 1261, 1445
BseLI CCNNNNNNNGG 7 cut(s) 98, 163, 655, 656, 2018, 2236, 2260
BseMI GCAATG 3 cut(s) 37, 1062, 2267
BseMII CTCAG 8 cut(s) 111, 553, 890, 1203, 1364, 1524, 2150, 2174
BseNI ACTGG 3 cut(s) 174, 239, 902
BseSI GKGCMC 1 cut(s) 1694
BseXI GCAGC 6 cut(s) 1628, 1687, 1709, 1793, 1873, 2126
BsgI GTGCAG 3 cut(s) 514, 1932, 2133
BshFI GGCC 8 cut(s) 281, 339, 346, 363, 585, 1015, 1743, 2084
BshNI GGYRCC 1 cut(s) 1856
BshVI ATCGAT 1 cut(s) 1493
BsiHKAI GWGCWC 1 cut(s) 1694
BsiSI CCGG 2 cut(s) 699, 1505
BslFI GGGAC 1 cut(s) 816
BslI CCNNNNNNNGG 7 cut(s) 98, 163, 655, 656, 2018, 2236, 2260
BsmAI GTCTC 2 cut(s) 1751, 2085
BsmFI GGGAC 1 cut(s) 816
BsmI GAATGC 1 cut(s) 201
BsnI GGCC 8 cut(s) 281, 339, 346, 363, 585, 1015, 1743, 2084
Bso31I GGTCTC 1 cut(s) 2085
Bsp1286I GDGCHC 3 cut(s) 1045, 1694, 2242
Bsp13I TCCGGA 1 cut(s) 698
Bsp1407I TGTACA 1 cut(s) 981
Bsp143I GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
Bsp1720I GCTNAGC 1 cut(s) 876
Bsp19I CCATGG 2 cut(s) 950, 1435
BspACI CCGC 5 cut(s) 157, 442, 1393, 2097, 2254
BspANI GGCC 8 cut(s) 281, 339, 346, 363, 585, 1015, 1743, 2084
BspCNI CTCAG 8 cut(s) 112, 552, 889, 1204, 1363, 1525, 2149, 2173
BspDI ATCGAT 1 cut(s) 1493
BspEI TCCGGA 1 cut(s) 698
BspLI GGNNCC 6 cut(s) 574, 832, 996, 1530, 1858, 2265
BspMAI CTGCAG 2 cut(s) 1465, 1699
BspOI GCTAGC 1 cut(s) 333
BspPI GGATC 4 cut(s) 29, 567, 580, 1417
BspQI GCTCTTC 1 cut(s) 105
BspT107I GGYRCC 1 cut(s) 1856
BspTI CTTAAG 1 cut(s) 11
BspTNI GGTCTC 1 cut(s) 2085
BsrDI GCAATG 3 cut(s) 37, 1062, 2267
BsrGI TGTACA 1 cut(s) 981
BsrI ACTGG 3 cut(s) 174, 239, 902
BssECI CCNNGG 4 cut(s) 950, 1435, 1644, 1738
BssMI GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
BssT1I CCWWGG 2 cut(s) 950, 1435
Bst2UI CCWGG 3 cut(s) 1186, 1740, 1861
Bst4CI ACNGT 5 cut(s) 424, 779, 920, 1788, 1964
Bst6I CTCTTC 3 cut(s) 105, 1005, 2109
BstAFI CTTAAG 1 cut(s) 11
BstAUI TGTACA 1 cut(s) 981
BstC8I GCNNGC 8 cut(s) 117, 327, 331, 348, 361, 1013, 1484, 1891
BstDEI CTNAG 9 cut(s) 120, 206, 539, 876, 1212, 1350, 1533, 2136, 2160
BstDSI CCRYGG 3 cut(s) 950, 1435, 1644
BstEII GGTNACC 1 cut(s) 179
BstENI CCTNNNNNAGG 2 cut(s) 96, 2016
BstF5I GGATG 9 cut(s) 259, 645, 754, 789, 946, 1222, 1227, 1261, 1445
BstKTI GATC 8 cut(s) 37, 575, 628, 1032, 1412, 1429, 1765, 2030
BstMAI GTCTC 2 cut(s) 1751, 2085
BstMBI GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
BstNI CCWGG 3 cut(s) 1186, 1740, 1861
BstNSI RCATGY 1 cut(s) 796
BstPI GGTNACC 1 cut(s) 179
BstSCI CCNGG 3 cut(s) 1184, 1738, 1859
BstSFI CTRYAG 5 cut(s) 46, 778, 1461, 1571, 1695
BstSLI GKGCMC 1 cut(s) 1694
BstV1I GCAGC 6 cut(s) 1628, 1687, 1709, 1793, 1873, 2126
BstV2I GAAGAC 2 cut(s) 131, 1155
BstX2I RGATCY 1 cut(s) 572
BstXI CCANNNNNNTGG 2 cut(s) 488, 726
BstYI RGATCY 1 cut(s) 572
Bsu15I ATCGAT 1 cut(s) 1493
Bsu36I CCTNAGG 1 cut(s) 206
BsuI GTATCC 2 cut(s) 948, 1182
BsuRI GGCC 8 cut(s) 281, 339, 346, 363, 585, 1015, 1743, 2084
BsuTUI ATCGAT 1 cut(s) 1493
BtgI CCRYGG 3 cut(s) 950, 1435, 1644
BtgZI GCGATG 1 cut(s) 348
BtsCI GGATG 9 cut(s) 259, 645, 754, 789, 946, 1222, 1227, 1261, 1445
BtsI GCAGTG 3 cut(s) 640, 1458, 1692
BtsIMutI CAGTG 6 cut(s) 181, 420, 640, 916, 1458, 1692
Cac8I GCNNGC 8 cut(s) 117, 327, 331, 348, 361, 1013, 1484, 1891
CaiI CAGNNNCTG 1 cut(s) 1889
Cfr13I GGNCC 3 cut(s) 362, 696, 830
ClaI ATCGAT 1 cut(s) 1493
CseI GACGC 1 cut(s) 899
CsiI ACCWGGT 1 cut(s) 1859
Csp6I GTAC 8 cut(s) 982, 990, 1735, 1789, 1825, 1857, 2005, 2039
CviQI GTAC 8 cut(s) 982, 990, 1735, 1789, 1825, 1857, 2005, 2039
DdeI CTNAG 9 cut(s) 120, 206, 539, 876, 1212, 1350, 1533, 2136, 2160
DpnI GATC 8 cut(s) 36, 574, 627, 1031, 1411, 1428, 1764, 2029
DpnII GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
DraI TTTAAA 1 cut(s) 1171
EaeI YGGCCR 4 cut(s) 337, 583, 1013, 1741
Eam1104I CTCTTC 3 cut(s) 105, 1005, 2109
EarI CTCTTC 3 cut(s) 105, 1005, 2109
Eco130I CCWWGG 2 cut(s) 950, 1435
Eco24I GRGCYC 2 cut(s) 1045, 2242
Eco31I GGTCTC 1 cut(s) 2085
Eco47I GGWCC 2 cut(s) 696, 830
Eco57I CTGAAG 2 cut(s) 114, 1167
Eco81I CCTNAGG 1 cut(s) 206
Eco91I GGTNACC 1 cut(s) 179
EcoNI CCTNNNNNAGG 2 cut(s) 96, 2016
EcoO65I GGTNACC 1 cut(s) 179
EcoRI GAATTC 1 cut(s) 1649
EcoRII CCWGG 3 cut(s) 1184, 1738, 1859
EcoT14I CCWWGG 2 cut(s) 950, 1435
EcoT22I ATGCAT 1 cut(s) 1130
EcoT38I GRGCYC 2 cut(s) 1045, 2242
ErhI CCWWGG 2 cut(s) 950, 1435
FalI AAGNNNNNCTT 4 cut(s) 123, 155, 1266, 1298
FaqI GGGAC 1 cut(s) 816
FauI CCCGC 1 cut(s) 2104
FauNDI CATATG 2 cut(s) 986, 1852
FbaI TGATCA 3 cut(s) 625, 1029, 1426
Fnu4HI GCNGC 6 cut(s) 1617, 1698, 1701, 1782, 1887, 2115
FokI GGATG 9 cut(s) 266, 632, 741, 796, 933, 1229, 1234, 1268, 1452
FriOI GRGCYC 2 cut(s) 1045, 2242
Fsp4HI GCNGC 6 cut(s) 1617, 1698, 1701, 1782, 1887, 2115
FspBI CTAG 3 cut(s) 330, 609, 1323
GluI GCNGC 6 cut(s) 1617, 1698, 1701, 1782, 1887, 2115
GsuI CTGGAG 2 cut(s) 1632, 2196
HaeIII GGCC 8 cut(s) 281, 339, 346, 363, 585, 1015, 1743, 2084
HapII CCGG 2 cut(s) 699, 1505
HgaI GACGC 1 cut(s) 899
HincII GTYRAC 1 cut(s) 1881
HindII GTYRAC 1 cut(s) 1881
HindIII AAGCTT 2 cut(s) 8, 1275
HinfI GANTC 4 cut(s) 619, 730, 1596, 1639
HpaI GTTAAC 1 cut(s) 1881
HpaII CCGG 2 cut(s) 699, 1505
HphI GGTGA 5 cut(s) 191, 1172, 1385, 1529, 2162
Hpy166II GTNNAC 5 cut(s) 400, 790, 1416, 1692, 1881
Hpy188I TCNGA 4 cut(s) 477, 577, 1426, 1453
Hpy8I GTNNAC 5 cut(s) 400, 790, 1416, 1692, 1881
Hpy99I CGWCG 1 cut(s) 890
HpyAV CCTTC 7 cut(s) 63, 291, 386, 503, 563, 747, 2012
HpyCH4III ACNGT 5 cut(s) 424, 779, 920, 1788, 1964
HpyCH4IV ACGT 2 cut(s) 1791, 2007
HpyF3I CTNAG 9 cut(s) 120, 206, 539, 876, 1212, 1350, 1533, 2136, 2160
HpySE526I ACGT 2 cut(s) 1791, 2007
Kpn2I TCCGGA 1 cut(s) 698
KpnI GGTACC 1 cut(s) 1860
Ksp22I TGATCA 3 cut(s) 625, 1029, 1426
KspAI GTTAAC 1 cut(s) 1881
Kzo9I GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 4 cut(s) 994, 1060, 1507, 1613
Lsp1109I GCAGC 6 cut(s) 1628, 1687, 1709, 1793, 1873, 2126
LweI GCATC 5 cut(s) 421, 1186, 1218, 1246, 1488
MabI ACCWGGT 1 cut(s) 1859
MaeI CTAG 3 cut(s) 330, 609, 1323
MaeII ACGT 2 cut(s) 1791, 2007
MaeIII GTNAC 5 cut(s) 179, 458, 637, 1373, 2150
MalI GATC 8 cut(s) 36, 574, 627, 1031, 1411, 1428, 1764, 2029
MboI GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
MfeI CAATTG 1 cut(s) 1906
MflI RGATCY 1 cut(s) 572
MhlI GDGCHC 3 cut(s) 1045, 1694, 2242
MlsI TGGCCA 4 cut(s) 339, 585, 1015, 1743
MluNI TGGCCA 4 cut(s) 339, 585, 1015, 1743
MlyI GAGTC 1 cut(s) 1605
MmeI TCCRAC 2 cut(s) 2121, 2234
Mox20I TGGCCA 4 cut(s) 339, 585, 1015, 1743
Mph1103I ATGCAT 1 cut(s) 1130
MroI TCCGGA 1 cut(s) 698
MroXI GAANNNNTTC 1 cut(s) 218
MscI TGGCCA 4 cut(s) 339, 585, 1015, 1743
MslI CAYNNNNRTG 4 cut(s) 551, 633, 797, 918
Msp20I TGGCCA 4 cut(s) 339, 585, 1015, 1743
MspA1I CMGCKG 2 cut(s) 1700, 1886
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 2 cut(s) 699, 1505
MspR9I CCNGG 3 cut(s) 1186, 1740, 1861
MunI CAATTG 1 cut(s) 1906
Mva1269I GAATGC 1 cut(s) 201
MvaI CCWGG 3 cut(s) 1186, 1740, 1861
NcoI CCATGG 2 cut(s) 950, 1435
NdeI CATATG 2 cut(s) 986, 1852
NdeII GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
NheI GCTAGC 1 cut(s) 329
NlaIV GGNNCC 6 cut(s) 574, 832, 996, 1530, 1858, 2265
NmuCI GTSAC 3 cut(s) 179, 1373, 2150
NsiI ATGCAT 1 cut(s) 1130
NspI RCATGY 1 cut(s) 796
PciSI GCTCTTC 1 cut(s) 105
PctI GAATGC 1 cut(s) 201
PdmI GAANNNNTTC 1 cut(s) 218
PfeI GAWTC 3 cut(s) 619, 730, 1639
PflFI GACNNNGTC 1 cut(s) 1337
PkrI GCNGC 6 cut(s) 1618, 1699, 1702, 1783, 1888, 2116
PleI GAGTC 1 cut(s) 1604
PpsI GAGTC 1 cut(s) 1604
Psp6I CCWGG 3 cut(s) 1184, 1738, 1859
PspEI GGTNACC 1 cut(s) 179
PspGI CCWGG 3 cut(s) 1184, 1738, 1859
PspN4I GGNNCC 6 cut(s) 574, 832, 996, 1530, 1858, 2265
PspPI GGNCC 3 cut(s) 362, 696, 830
PstI CTGCAG 2 cut(s) 1465, 1699
PstNI CAGNNNCTG 1 cut(s) 1889
PsuI RGATCY 1 cut(s) 572
PsyI GACNNNGTC 1 cut(s) 1337
PvuII CAGCTG 2 cut(s) 1700, 1886
RsaI GTAC 8 cut(s) 983, 991, 1736, 1790, 1826, 1858, 2006, 2040
RsaNI GTAC 8 cut(s) 982, 990, 1735, 1789, 1825, 1857, 2005, 2039
RseI CAYNNNNRTG 4 cut(s) 551, 633, 797, 918
SapI GCTCTTC 1 cut(s) 105
SatI GCNGC 6 cut(s) 1617, 1698, 1701, 1782, 1887, 2115
Sau3AI GATC 8 cut(s) 34, 572, 625, 1029, 1409, 1426, 1762, 2027
Sau96I GGNCC 3 cut(s) 362, 696, 830
SchI GAGTC 1 cut(s) 1605
ScrFI CCNGG 3 cut(s) 1186, 1740, 1861
SduI GDGCHC 3 cut(s) 1045, 1694, 2242
SexAI ACCWGGT 1 cut(s) 1859
SfaNI GCATC 5 cut(s) 421, 1186, 1218, 1246, 1488
SfcI CTRYAG 5 cut(s) 46, 778, 1461, 1571, 1695
SinI GGWCC 2 cut(s) 696, 830
SmiMI CAYNNNNRTG 4 cut(s) 551, 633, 797, 918
SmlI CTYRAG 3 cut(s) 11, 1670, 1685
SmoI CTYRAG 3 cut(s) 11, 1670, 1685
SsiI CCGC 5 cut(s) 157, 442, 1393, 2097, 2254
SspMI CTAG 3 cut(s) 330, 609, 1323
StyD4I CCNGG 3 cut(s) 1184, 1738, 1859
StyI CCWWGG 2 cut(s) 950, 1435
TaaI ACNGT 5 cut(s) 424, 779, 920, 1788, 1964
TaiI ACGT 2 cut(s) 1794, 2010
TaqI TCGA 3 cut(s) 674, 1047, 1493
TatI WGTACW 2 cut(s) 981, 2038
TfiI GAWTC 3 cut(s) 619, 730, 1639
TscAI CASTG 6 cut(s) 181, 427, 640, 923, 1465, 1699
TseFI GTSAC 3 cut(s) 179, 1373, 2150
TseI GCWGC 6 cut(s) 1616, 1697, 1700, 1781, 1886, 2114
Tsp45I GTSAC 3 cut(s) 179, 1373, 2150
TspGWI ACGGA 2 cut(s) 1007, 1661
TspRI CASTG 6 cut(s) 181, 427, 640, 923, 1465, 1699
Tth111I GACNNNGTC 1 cut(s) 1337
Vha464I CTTAAG 1 cut(s) 11
VneI GTGCAC 1 cut(s) 1690
VpaK11BI GGWCC 2 cut(s) 696, 830
XagI CCTNNNNNAGG 2 cut(s) 96, 2016
XapI RAATTY 2 cut(s) 1649, 2032
XceI RCATGY 1 cut(s) 796
XcmI CCANNNNNNNNNTGG 2 cut(s) 765, 1200
XmnI GAANNNNTTC 1 cut(s) 218
XspI CTAG 3 cut(s) 330, 609, 1323
Zsp2I ATGCAT 1 cut(s) 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.