Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000480.1

Orthogroup ID

OG0000173

Physical Location & Seq

Genomic Coordinates Reverse (-)

217208 .. 222219

Gene Structure 5012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000480.1_g000036.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

atgtggaagcttaaggttgcagaaggtggggaagattcctcggcttacatttacagcacaaacaacttcgtgggaaggcagacatggaagtttgatcctgatgcaggaactgctgaagagcgagctgaggttgaagcagctcgtcttcatttctacaacaaccgccatcaggttaaacccagtggtgaccttctttggagaatgcagttcctaagggagaagcagttcaaacagacaattcctccagtaaaaattgaagatggcgaggttatcacacatgaaaaaaccacagatgcactgagaaggtctgtccacttcttctcagcgctgcaggcaagcgatggccattggcctgcggaaaatgctggccctttatttttccttcctcctttggtcatagttatgcacattacggggcatcttaacaatgtattctctaaggagcatcgcaaagaaattctgcgttacatatactatcatcagaatgaagatggtggttggggcctacatatcgaaggtcatagcaccatgttcagcacagctctcagctacatttgtatgcgtattctcggagagggacctgatgatggtgggacaatgcttgtccgagagcaagaaagtggattcttgatcatggtggtgtcacacacataccctcttggggaaagacttggctttcggatgacttacatgccaatgtcatacctatatggaaaaaggtttgttggcccaattacacctctcattcttcaattgagggacgaactttttattcaaccttacaacgaaatcaattggaaggaagtacgccatctatgtgccaaagaggatatctactaccctcatccttggatgcaggatctcctttgggatagcctctacattttcacagagcctcttcttacccgttggcccttcaacaagttgatcagagaaaaggctctacaagtggcgatgaagcatattcattacgaagacgagaacagccggtacattaccatggggtgtgtggaaaaggtgttatgtatgcttgcctgttgggttgaagatccaaatggggactatttcaagaagcatctcgctaggatcccggattatttatgggttgctgaagatgggatgaagatgcaaagtgttggcagtcaggagtgggatgctagttttgccattcaagctttgcttgctagtaatctcaagaatgaaattggaccaacgcttgctagaggacatgacttcataaagaaatctcaggtcaaggacaacccttctggtgacttcaaaagcatgtaccgccacatttctaaaggatcgtggacttacaccgatcaagatcatggatggcaactttctgattgcactgcagaaggtttaaacagcaagaatggtggtttatcagcctgggagccagcaggggcagcagaatggttagacatgttaaatccgacagagttctttgaggacattgtaattgagcatgaacatattgagtgcacttcaactgtaatccaggctttagttatgtttaagaagctacaccctgggcacaggaagaaagagattgaacattccatcaccaatgctgtacgctacgttgaaaatatacaaatgcccgatggttcatggtatggagattggggagtttgcttcacatatggtacctggtttgcactaggaggattggcagctgctggcaagacatttagcacttgtgcagccatgcgcaatggggttagctttctacttacggtgcagagagagaacggtggttggggagagagctatctttcatgtccacaaaagacatacattcctctcgaaggaaaccgatccaatctagtacatactgcttgggctatgatgggtctcattcatgcgggacaggcagagagagacccaacacctcttcatcgcgcagcaaagtttataatcaattctcaattggaaaatggtgattttccccagcaggtattttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0019742 GO:0019745 GO:0031559 GO:0042300 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00909 ko01110 map00909 map01110

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

657

Amino Acids

75.3

Weight (kDa)

5.96

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca	FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica	MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica	Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis	pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis	RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata	RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora	Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii	Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa	Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha	Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana	Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1925
Acc16I	TGCGCA	1 cut(s)	1721
Acc36I	ACCTGC	1 cut(s)	1954
Acc65I	GGTACC	1 cut(s)	1655
AccB1I	GGYRCC	1 cut(s)	1655
AccII	CGCG	1 cut(s)	1911
AciI	CCGC	4 cut(s)	163, 356, 1291, 1874
AclWI	GGATC	7 cut(s)	89, 867, 1043, 1081, 1094, 1315, 1821
AcoI	YGGCCR	1 cut(s)	343
AcsI	RAATTY	1 cut(s)	456
AcuI	CTGAAG	2 cut(s)	135, 1131
AfaI	GTAC	6 cut(s)	807, 992, 1289, 1584, 1657, 1839
AfeI	AGCGCT	1 cut(s)	327
AfiI	CCNNNNNNNGG	5 cut(s)	104, 169, 587, 661, 1817
AflII	CTTAAG	1 cut(s)	11
AflIII	ACRYGT	1 cut(s)	1431
AjnI	CCWGG	4 cut(s)	1397, 1506, 1537, 1658
AloI	GAACNNNNNNTCC	2 cut(s)	209, 241
Alw21I	GWGCWC	1 cut(s)	1493
Alw26I	GTCTC	2 cut(s)	1868, 1884
Alw44I	GTGCAC	1 cut(s)	1489
AlwI	GGATC	7 cut(s)	89, 867, 1043, 1081, 1094, 1315, 1821
AlwNI	CAGNNNCTG	2 cut(s)	110, 1688
Aor51HI	AGCGCT	1 cut(s)	327
AoxI	GGCC	6 cut(s)	343, 350, 367, 502, 727, 911
ApaLI	GTGCAC	1 cut(s)	1489
ApeKI	GCWGC	7 cut(s)	137, 328, 1415, 1682, 1685, 1712, 1913
ApoI	RAATTY	1 cut(s)	456
ArsI	GACNNNNNNTTYG	2 cut(s)	660, 692
Asp700I	GAANNNNTTC	1 cut(s)	224
Asp718I	GGTACC	1 cut(s)	1655
AspLEI	GCGC	3 cut(s)	328, 1722, 1913
AspS9I	GGNCC	6 cut(s)	368, 502, 578, 728, 912, 1208
AsuC2I	CCSGG	1 cut(s)	1091
AsuHPI	GGTGA	4 cut(s)	197, 1283, 1564, 1961
AvaII	GGWCC	2 cut(s)	578, 1208
AxyI	CCTNAGG	1 cut(s)	212
BaeGI	GKGCMC	2 cut(s)	1493, 1545
BalI	TGGCCA	1 cut(s)	345
BamHI	GGATCC	1 cut(s)	1086
BanI	GGYRCC	1 cut(s)	1655
BbsI	GAAGAC	2 cut(s)	137, 981
Bbv12I	GWGCWC	1 cut(s)	1493
BbvCI	CCTCAGC	1 cut(s)	126
BbvI	GCAGC	7 cut(s)	149, 315, 1427, 1672, 1694, 1724, 1925
BciT130I	CCWGG	4 cut(s)	1399, 1508, 1539, 1660
BclI	TGATCA	2 cut(s)	630, 927
BcnI	CCSGG	1 cut(s)	1091
BcoDI	GTCTC	2 cut(s)	1868, 1884
BfaI	CTAG	6 cut(s)	1083, 1158, 1185, 1221, 1670, 1835
BfmI	CTRYAG	2 cut(s)	329, 1359
BfoI	RGCGCY	1 cut(s)	329
BfrI	CTTAAG	1 cut(s)	11
BfuAI	ACCTGC	1 cut(s)	1954
BisI	GCNGC	7 cut(s)	138, 329, 1416, 1683, 1686, 1713, 1914
BlsI	GCNGC	7 cut(s)	139, 330, 1417, 1684, 1687, 1714, 1915
Bme1390I	CCNGG	5 cut(s)	1091, 1399, 1508, 1539, 1660
Bme18I	GGWCC	2 cut(s)	578, 1208
BmgT120I	GGNCC	6 cut(s)	368, 502, 578, 728, 912, 1208
BmiI	GGNNCC	5 cut(s)	503, 579, 1088, 1404, 1657
BmrFI	CCNGG	5 cut(s)	1091, 1399, 1508, 1539, 1660
BmrI	ACTGGG	1 cut(s)	174
BmsI	GCATC	8 cut(s)	91, 283, 427, 454, 843, 1084, 1116, 1144
BmuI	ACTGGG	1 cut(s)	174
BpiI	GAAGAC	2 cut(s)	137, 981
BpmI	CTGGAG	1 cut(s)	228
Bpu10I	CCTNAGC	1 cut(s)	126
BpuEI	CTTGAG	1 cut(s)	1178
BpuMI	CCSGG	1 cut(s)	1091
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaI	GGTCTC	2 cut(s)	1868, 1884
BsaJI	CCNNGG	6 cut(s)	39, 848, 999, 1398, 1537, 1538
BsaXI	ACNNNNNCTCC	4 cut(s)	209, 226, 239, 256
Bsc4I	CCNNNNNNNGG	5 cut(s)	104, 169, 587, 661, 1817
Bse118I	RCCGGY	1 cut(s)	987
Bse1I	ACTGG	2 cut(s)	180, 245
Bse21I	CCTNAGG	1 cut(s)	212
Bse3DI	GCAATG	1 cut(s)	1729
Bse8I	GATNNNNATC	1 cut(s)	1329
BseBI	CCWGG	4 cut(s)	1399, 1508, 1539, 1660
BseDI	CCNNGG	6 cut(s)	39, 848, 999, 1398, 1537, 1538
BseGI	GGATG	6 cut(s)	687, 844, 858, 1125, 1159, 1343
BseJI	GATNNNNATC	1 cut(s)	1329
BseLI	CCNNNNNNNGG	5 cut(s)	104, 169, 587, 661, 1817
BseMI	GCAATG	1 cut(s)	1729
BseMII	CTCAG	5 cut(s)	117, 290, 336, 559, 1262
BseNI	ACTGG	2 cut(s)	180, 245
BseSI	GKGCMC	2 cut(s)	1493, 1545
BseXI	GCAGC	7 cut(s)	149, 315, 1427, 1672, 1694, 1724, 1925
BseYI	CCCAGC	1 cut(s)	1959
BsgI	GTGCAG	2 cut(s)	1731, 1769
Bsh1236I	CGCG	1 cut(s)	1911
BshFI	GGCC	6 cut(s)	345, 352, 369, 504, 729, 913
BshNI	GGYRCC	1 cut(s)	1655
BsiHKAI	GWGCWC	1 cut(s)	1493
BsiSI	CCGG	2 cut(s)	988, 1091
BslFI	GGGAC	5 cut(s)	591, 607, 773, 1073, 1890
BslI	CCNNNNNNNGG	5 cut(s)	104, 169, 587, 661, 1817
BsmAI	GTCTC	2 cut(s)	1868, 1884
BsmFI	GGGAC	5 cut(s)	591, 607, 773, 1073, 1890
BsmI	GAATGC	1 cut(s)	207
BsnI	GGCC	6 cut(s)	345, 352, 369, 504, 729, 913
Bso31I	GGTCTC	2 cut(s)	1868, 1884
Bsp1286I	GDGCHC	2 cut(s)	1493, 1545
Bsp19I	CCATGG	1 cut(s)	999
BspACI	CCGC	4 cut(s)	163, 356, 1291, 1874
BspANI	GGCC	6 cut(s)	345, 352, 369, 504, 729, 913
BspCNI	CTCAG	5 cut(s)	118, 291, 335, 558, 1261
BspFNI	CGCG	1 cut(s)	1911
BspLI	GGNNCC	5 cut(s)	503, 579, 1088, 1404, 1657
BspMAI	CTGCAG	2 cut(s)	333, 1363
BspMI	ACCTGC	1 cut(s)	1954
BspPI	GGATC	7 cut(s)	89, 867, 1043, 1081, 1094, 1315, 1821
BspQI	GCTCTTC	1 cut(s)	111
BspT107I	GGYRCC	1 cut(s)	1655
BspTI	CTTAAG	1 cut(s)	11
BspTNI	GGTCTC	2 cut(s)	1868, 1884
BsrDI	GCAATG	1 cut(s)	1729
BsrFI	RCCGGY	1 cut(s)	987
BsrI	ACTGG	2 cut(s)	180, 245
BssAI	RCCGGY	1 cut(s)	987
BssECI	CCNNGG	6 cut(s)	39, 848, 999, 1398, 1537, 1538
BssT1I	CCWWGG	2 cut(s)	848, 999
Bst2UI	CCWGG	4 cut(s)	1399, 1508, 1539, 1660
Bst4CI	ACNGT	3 cut(s)	1501, 1747, 1763
Bst6I	CTCTTC	3 cut(s)	111, 903, 1908
BstAFI	CTTAAG	1 cut(s)	11
BstAPI	GCANNNNNTGC	1 cut(s)	110
BstDEI	CTNAG	7 cut(s)	126, 212, 299, 322, 438, 545, 1248
BstDSI	CCRYGG	1 cut(s)	999
BstEII	GGTNACC	1 cut(s)	185
BstENI	CCTNNNNNAGG	2 cut(s)	102, 1815
BstF5I	GGATG	6 cut(s)	687, 844, 858, 1125, 1159, 1343
BstFNI	CGCG	1 cut(s)	1911
BstH2I	RGCGCY	1 cut(s)	329
BstHHI	GCGC	3 cut(s)	328, 1722, 1913
BstMAI	GTCTC	2 cut(s)	1868, 1884
BstMWI	GCNNNNNNNGC	9 cut(s)	110, 332, 362, 1163, 1172, 1181, 1290, 1415, 1880
BstNI	CCWGG	4 cut(s)	1399, 1508, 1539, 1660
BstNSI	RCATGY	3 cut(s)	694, 1288, 1435
BstPI	GGTNACC	1 cut(s)	185
BstSCI	CCNGG	5 cut(s)	1089, 1397, 1506, 1537, 1658
BstSFI	CTRYAG	2 cut(s)	329, 1359
BstSLI	GKGCMC	2 cut(s)	1493, 1545
BstUI	CGCG	1 cut(s)	1911
BstV1I	GCAGC	7 cut(s)	149, 315, 1427, 1672, 1694, 1724, 1925
BstV2I	GAAGAC	2 cut(s)	137, 981
BstX2I	RGATCY	3 cut(s)	859, 1048, 1086
BstYI	RGATCY	3 cut(s)	859, 1048, 1086
Bsu36I	CCTNAGG	1 cut(s)	212
BsuRI	GGCC	6 cut(s)	345, 352, 369, 504, 729, 913
BtgI	CCRYGG	1 cut(s)	999
BtgZI	GCGATG	4 cut(s)	354, 431, 968, 1892
BtsCI	GGATG	6 cut(s)	687, 844, 858, 1125, 1159, 1343
BtsI	GCAGTG	1 cut(s)	1356
BtsIMutI	CAGTG	3 cut(s)	187, 296, 1356
BveI	ACCTGC	1 cut(s)	1954
CaiI	CAGNNNCTG	2 cut(s)	110, 1688
CfoI	GCGC	3 cut(s)	328, 1722, 1913
Cfr10I	RCCGGY	1 cut(s)	987
Cfr13I	GGNCC	6 cut(s)	368, 502, 578, 728, 912, 1208
CsiI	ACCWGGT	1 cut(s)	1658
Csp6I	GTAC	6 cut(s)	806, 991, 1288, 1583, 1656, 1838
CspCI	CAANNNNNGTGG	2 cut(s)	1366, 1401
CviQI	GTAC	6 cut(s)	806, 991, 1288, 1583, 1656, 1838
DdeI	CTNAG	7 cut(s)	126, 212, 299, 322, 438, 545, 1248
DraI	TTTAAA	1 cut(s)	1371
EaeI	YGGCCR	1 cut(s)	343
Eam1104I	CTCTTC	3 cut(s)	111, 903, 1908
EarI	CTCTTC	3 cut(s)	111, 903, 1908
Eco130I	CCWWGG	2 cut(s)	848, 999
Eco31I	GGTCTC	2 cut(s)	1868, 1884
Eco32I	GATATC	1 cut(s)	832
Eco47I	GGWCC	2 cut(s)	578, 1208
Eco47III	AGCGCT	1 cut(s)	327
Eco57I	CTGAAG	2 cut(s)	135, 1131
Eco81I	CCTNAGG	1 cut(s)	212
Eco91I	GGTNACC	1 cut(s)	185
EcoNI	CCTNNNNNAGG	2 cut(s)	102, 1815
EcoO109I	RGGNCCY	2 cut(s)	502, 578
EcoO65I	GGTNACC	1 cut(s)	185
EcoRII	CCWGG	4 cut(s)	1397, 1506, 1537, 1658
EcoRV	GATATC	1 cut(s)	832
EcoT14I	CCWWGG	2 cut(s)	848, 999
ErhI	CCWWGG	2 cut(s)	848, 999
FalI	AAGNNNNNCTT	2 cut(s)	1164, 1196
FaqI	GGGAC	5 cut(s)	591, 607, 773, 1073, 1890
FauI	CCCGC	1 cut(s)	1867
FauNDI	CATATG	1 cut(s)	1651
FbaI	TGATCA	2 cut(s)	630, 927
Fnu4HI	GCNGC	7 cut(s)	138, 329, 1416, 1683, 1686, 1713, 1914
FokI	GGATG	6 cut(s)	694, 831, 865, 1132, 1166, 1350
Fsp4HI	GCNGC	7 cut(s)	138, 329, 1416, 1683, 1686, 1713, 1914
FspBI	CTAG	6 cut(s)	1083, 1158, 1185, 1221, 1670, 1835
FspI	TGCGCA	1 cut(s)	1721
GlaI	GCGC	3 cut(s)	327, 1721, 1912
GluI	GCNGC	7 cut(s)	138, 329, 1416, 1683, 1686, 1713, 1914
GsaI	CCCAGC	1 cut(s)	1963
GsuI	CTGGAG	1 cut(s)	228
HaeII	RGCGCY	1 cut(s)	329
HaeIII	GGCC	6 cut(s)	345, 352, 369, 504, 729, 913
HapII	CCGG	2 cut(s)	988, 1091
HhaI	GCGC	3 cut(s)	328, 1722, 1913
Hin6I	GCGC	3 cut(s)	326, 1720, 1911
HinP1I	GCGC	3 cut(s)	326, 1720, 1911
HindIII	AAGCTT	2 cut(s)	8, 1173
HinfI	GANTC	2 cut(s)	35, 624
HpaII	CCGG	2 cut(s)	988, 1091
HphI	GGTGA	4 cut(s)	197, 1283, 1564, 1961
Hpy166II	GTNNAC	4 cut(s)	313, 1314, 1491, 1793
Hpy188I	TCNGA	7 cut(s)	483, 572, 608, 681, 932, 1351, 1443
Hpy188III	TCNNGA	7 cut(s)	98, 628, 1069, 1145, 1195, 1328, 1814
Hpy8I	GTNNAC	4 cut(s)	313, 1314, 1491, 1793
HpyCH4III	ACNGT	3 cut(s)	1501, 1747, 1763
HpyCH4IV	ACGT	1 cut(s)	1590
HpyF10VI	GCNNNNNNNGC	9 cut(s)	110, 332, 362, 1163, 1172, 1181, 1290, 1415, 1880
HpyF3I	CTNAG	7 cut(s)	126, 212, 299, 322, 438, 545, 1248
HpySE526I	ACGT	1 cut(s)	1590
HspAI	GCGC	3 cut(s)	326, 1720, 1911
KpnI	GGTACC	1 cut(s)	1659
Ksp22I	TGATCA	2 cut(s)	630, 927
LguI	GCTCTTC	1 cut(s)	111
LmnI	GCTCC	2 cut(s)	442, 1402
Lsp1109I	GCAGC	7 cut(s)	149, 315, 1427, 1672, 1694, 1724, 1925
LweI	GCATC	8 cut(s)	91, 283, 427, 454, 843, 1084, 1116, 1144
MabI	ACCWGGT	1 cut(s)	1658
MaeI	CTAG	6 cut(s)	1083, 1158, 1185, 1221, 1670, 1835
MaeII	ACGT	1 cut(s)	1590
MaeIII	GTNAC	4 cut(s)	185, 464, 642, 1271
MfeI	CAATTG	3 cut(s)	752, 793, 1937
MflI	RGATCY	3 cut(s)	859, 1048, 1086
MhlI	GDGCHC	2 cut(s)	1493, 1545
MlsI	TGGCCA	1 cut(s)	345
MluNI	TGGCCA	1 cut(s)	345
MmeI	TCCRAC	1 cut(s)	1466
Mox20I	TGGCCA	1 cut(s)	345
MroXI	GAANNNNTTC	1 cut(s)	224
MscI	TGGCCA	1 cut(s)	345
MseI	TTAA	7 cut(s)	12, 174, 423, 1370, 1436, 1524, 1972
MslI	CAYNNNNRTG	7 cut(s)	401, 483, 557, 638, 695, 816, 998
Msp20I	TGGCCA	1 cut(s)	345
MspA1I	CMGCKG	1 cut(s)	1685
MspCI	CTTAAG	1 cut(s)	11
MspI	CCGG	2 cut(s)	988, 1091
MspR9I	CCNGG	5 cut(s)	1091, 1399, 1508, 1539, 1660
MssI	GTTTAAAC	1 cut(s)	1371
MunI	CAATTG	3 cut(s)	752, 793, 1937
Mva1269I	GAATGC	1 cut(s)	207
MvaI	CCWGG	4 cut(s)	1399, 1508, 1539, 1660
MvnI	CGCG	1 cut(s)	1911
MwoI	GCNNNNNNNGC	9 cut(s)	110, 332, 362, 1163, 1172, 1181, 1290, 1415, 1880
NciI	CCSGG	1 cut(s)	1091
NcoI	CCATGG	1 cut(s)	999
NdeI	CATATG	1 cut(s)	1651
NlaIV	GGNNCC	5 cut(s)	503, 579, 1088, 1404, 1657
NmeAIII	GCCGAG	1 cut(s)	20
NmuCI	GTSAC	3 cut(s)	185, 642, 1271
NsbI	TGCGCA	1 cut(s)	1721
NspI	RCATGY	3 cut(s)	694, 1288, 1435
PasI	CCCWGGG	1 cut(s)	1538
PciI	ACATGT	1 cut(s)	1431
PciSI	GCTCTTC	1 cut(s)	111
PctI	GAATGC	1 cut(s)	207
PdmI	GAANNNNTTC	1 cut(s)	224
PfeI	GAWTC	2 cut(s)	35, 624
PfoI	TCCNGGA	1 cut(s)	1089
PkrI	GCNGC	7 cut(s)	139, 330, 1417, 1684, 1687, 1714, 1915
PmeI	GTTTAAAC	1 cut(s)	1371
PpuMI	RGGWCCY	1 cut(s)	578
PscI	ACATGT	1 cut(s)	1431
PsiI	TTATAA	1 cut(s)	1925
Psp5II	RGGWCCY	1 cut(s)	578
Psp6I	CCWGG	4 cut(s)	1397, 1506, 1537, 1658
PspEI	GGTNACC	1 cut(s)	185
PspFI	CCCAGC	1 cut(s)	1959
PspGI	CCWGG	4 cut(s)	1397, 1506, 1537, 1658
PspN4I	GGNNCC	5 cut(s)	503, 579, 1088, 1404, 1657
PspPI	GGNCC	6 cut(s)	368, 502, 578, 728, 912, 1208
PspPPI	RGGWCCY	1 cut(s)	578
PsrI	GAACNNNNNNTAC	2 cut(s)	974, 1006
PstI	CTGCAG	2 cut(s)	333, 1363
PstNI	CAGNNNCTG	2 cut(s)	110, 1688
PsuI	RGATCY	3 cut(s)	859, 1048, 1086
PvuII	CAGCTG	1 cut(s)	1685
RsaI	GTAC	6 cut(s)	807, 992, 1289, 1584, 1657, 1839
RsaNI	GTAC	6 cut(s)	806, 991, 1288, 1583, 1656, 1838
RseI	CAYNNNNRTG	7 cut(s)	401, 483, 557, 638, 695, 816, 998
SapI	GCTCTTC	1 cut(s)	111
SaqAI	TTAA	7 cut(s)	12, 174, 423, 1370, 1436, 1524, 1972
SatI	GCNGC	7 cut(s)	138, 329, 1416, 1683, 1686, 1713, 1914
Sau96I	GGNCC	6 cut(s)	368, 502, 578, 728, 912, 1208
ScrFI	CCNGG	5 cut(s)	1091, 1399, 1508, 1539, 1660
SduI	GDGCHC	2 cut(s)	1493, 1545
SexAI	ACCWGGT	1 cut(s)	1658
SfaNI	GCATC	8 cut(s)	91, 283, 427, 454, 843, 1084, 1116, 1144
SfcI	CTRYAG	2 cut(s)	329, 1359
SinI	GGWCC	2 cut(s)	578, 1208
SmiMI	CAYNNNNRTG	7 cut(s)	401, 483, 557, 638, 695, 816, 998
SmlI	CTYRAG	2 cut(s)	11, 1193
SmoI	CTYRAG	2 cut(s)	11, 1193
SsiI	CCGC	4 cut(s)	163, 356, 1291, 1874
SspMI	CTAG	6 cut(s)	1083, 1158, 1185, 1221, 1670, 1835
StyD4I	CCNGG	5 cut(s)	1089, 1397, 1506, 1537, 1658
StyI	CCWWGG	2 cut(s)	848, 999
TaaI	ACNGT	3 cut(s)	1501, 1747, 1763
TaiI	ACGT	1 cut(s)	1593
TaqI	TCGA	2 cut(s)	513, 1815
TatI	WGTACW	1 cut(s)	1837
TfiI	GAWTC	2 cut(s)	35, 624
Tru1I	TTAA	7 cut(s)	12, 174, 423, 1370, 1436, 1524, 1972
Tru9I	TTAA	7 cut(s)	12, 174, 423, 1370, 1436, 1524, 1972
TscAI	CASTG	3 cut(s)	187, 303, 1363
TseFI	GTSAC	3 cut(s)	185, 642, 1271
TseI	GCWGC	7 cut(s)	137, 328, 1415, 1682, 1685, 1712, 1913
Tsp45I	GTSAC	3 cut(s)	185, 642, 1271
TspRI	CASTG	3 cut(s)	187, 303, 1363
Vha464I	CTTAAG	1 cut(s)	11
VneI	GTGCAC	1 cut(s)	1489
VpaK11BI	GGWCC	2 cut(s)	578, 1208
XagI	CCTNNNNNAGG	2 cut(s)	102, 1815
XapI	RAATTY	1 cut(s)	456
XceI	RCATGY	3 cut(s)	694, 1288, 1435
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1006
XmnI	GAANNNNTTC	1 cut(s)	224
XspI	CTAG	6 cut(s)	1083, 1158, 1185, 1221, 1670, 1835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.