Rh2AG467600

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000173
Physical Location & Seq
Forward (+)
68831367 .. 68836880
5514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG467600.1

Sequence Viewer

Length: 1527 bp
ATGTGGAGGATTAAGTTCGGAGAGGGTGCCAATGACCCTTTGCTCTTCAGCACAAACAACTTCCACGGGAGGCAGACATGGGAGTTCGACCCTGATGCAGGCACACCGGAAGAGCGCGCCGAGGTTGAGGCCGCTCGTGAGAATTTCTACCAAAATCGCTACAAGGTTGCTCCCAGCAGTGACCTCCTCTGGCGTTTTCAGATGCTAAGAGAGAGAAACTTCAAGCAAGAAATTCCTCCGGTGAGAATTGGGGAAGGTGAGGAAATCACATTTGATCGGGCCACAGCTGCATACAAGAGGGCTGCTTCCTTCTGGAATGCCTTGCAGTCACCCCATGGTCACTGGCCTGCTGAGAATGCTGGCCCAAACTTTTACTTTCCTCCCTTGGTCATGAGTGTATACATACCAGGATACCTCAATGTTGTTTTCCCTGCTGAGCACAAGAAGGAAATCTTGCGCTACACATACAACCATCAGAACGAAGATGGTGGCTGGGGTTTGCACATTGCAGGGCCTAGTATGATGTTCACCACATGTCTCAACTATTGTATGATGCGTATTCTCGGAGAAGGCCCTGAGGGTGGTCGAGACAACGCCTGTGCAAGGGCCCGGAAATGGATTCTTGACCGCGGTGGTGCACAATATTCTGCCTCATGGGGAAAGACCTGGATGGCGATACTTGGTGTTTATGATTGGGAAGGAAGCAACCCAATGCCCCCAGAGTTTTGGACTTACCCTACTCTGCTTCCATTTCATCCATCAAAAATGTTTTGCTACTGTAGGTTGACTTACCTACCCATGTCTTACTTTTATGCAACAAGATTTGTTGGCCCAATCACTCCTCTTGTTGAGCAATTGAGACAAGAAATCTACAATGAGCCTTACGATCAAATCAAGTGGAGTCAAGTGCGCCATCATTGTGCAACAGAAGATAACTACTATCCTCATGGAAGAGTACAGCGCTTTATGTGGGATAGTCTTTACAATGTTTGTGAGCCTCTTCTCAAAATCTGGCCCTTCAAAAAGATCAGAGACAATGCTGTTCAATTCACCATTGACCAAATTCATTACGAAGACGAGAACAGTCGCTACATTACCATTGGATGTGTTGAAAAGCCATTGATGATGCTTGCTTGTTGGGCTGAGGATCCTAGTGGAGAATCTTTTAAGAAGCATCTTCCTAGAGTTACTGATTATATTTGGCTCGGTGAAGATGGTATCAAGATGCAGAGTTTTGGTAGTCAGTCATGGGATTGTGCTCTTGTGATTCAAGCATTGCTTTGTGGGAATCTCAACAATGAATTTGGACCTGTACTTAAGTTGGCACATGACTTCCTAAAGAAATCTCAGGTGAGGATGAATACTTCCGGCGACTACTTGGCTCATTTCCGTCATATTTCTAAAGGATGCTGGACTTTCTCTGATCGGGATCATGGATGGCAAGTGTCTGACTGCACTGCAGAAGCATTGAGGGTAACTGAGCTTACTTATTCAAGACTACCGCACTTAACTCGAGTAGAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

508

Amino Acids

59.15

Weight (kDa)

6.29

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 101 - 391 3.2e-33 Squalene-hopene cyclase N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 26
AccBSI CCGCTC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 399
AccII CGCG 2 cut(s) 117, 630
AciI CCGC 4 cut(s) 132, 628, 630, 1502
AclWI GGATC 3 cut(s) 1142, 1155, 1437
AcsI RAATTY 4 cut(s) 142, 231, 1062, 1301
AcuI CTGAAG 1 cut(s) 31
AfaI GTAC 2 cut(s) 957, 1314
AfeI AGCGCT 1 cut(s) 962
AfiI CCNNNNNNNGG 4 cut(s) 98, 581, 603, 615
AflII CTTAAG 1 cut(s) 1316
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 6 cut(s) 223, 1021, 1046, 1112, 1271, 1494
AjnI CCWGG 2 cut(s) 406, 665
AluBI AGCT 2 cut(s) 287, 1483
AluI AGCT 2 cut(s) 287, 1483
Alw21I GWGCWC 3 cut(s) 441, 640, 1261
Alw26I GTCTC 4 cut(s) 542, 582, 853, 1026
Alw44I GTGCAC 1 cut(s) 636
AlwI GGATC 3 cut(s) 1142, 1155, 1437
Ama87I CYCGRG 1 cut(s) 1512
Aor51HI AGCGCT 1 cut(s) 962
AoxI GGCC 9 cut(s) 129, 279, 344, 361, 512, 571, 606, 829, 1013
ApaI GGGCCC 1 cut(s) 610
ApaLI GTGCAC 1 cut(s) 636
ApeKI GCWGC 2 cut(s) 287, 302
ApoI RAATTY 4 cut(s) 142, 231, 1062, 1301
AspLEI GCGC 5 cut(s) 117, 119, 459, 912, 963
AspS9I GGNCC 9 cut(s) 279, 362, 512, 572, 606, 607, 830, 1014, 1307
AsuC2I CCSGG 1 cut(s) 610
AsuHPI GGTGA 7 cut(s) 253, 269, 321, 520, 1042, 1220, 1363
AvaI CYCGRG 1 cut(s) 1512
AvaII GGWCC 1 cut(s) 1307
AxyI CCTNAGG 1 cut(s) 576
BaeGI GKGCMC 2 cut(s) 610, 640
BamHI GGATCC 1 cut(s) 1147
BanI GGYRCC 1 cut(s) 26
BanII GRGCYC 1 cut(s) 610
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 1 cut(s) 1080
Bbv12I GWGCWC 3 cut(s) 441, 640, 1261
BbvCI CCTCAGC 1 cut(s) 1143
BbvI GCAGC 2 cut(s) 274, 289
BccI CCATC 7 cut(s) 479, 480, 664, 766, 921, 1208, 1431
BcgI CGANNNNNNTGC 4 cut(s) 77, 111, 1493, 1527
BciT130I CCWGG 2 cut(s) 408, 667
BciVI GTATCC 1 cut(s) 404
BcnI CCSGG 1 cut(s) 610
BcoDI GTCTC 4 cut(s) 542, 582, 853, 1026
BfaI CTAG 3 cut(s) 516, 1152, 1182
BfmI CTRYAG 2 cut(s) 778, 1458
BfoI RGCGCY 1 cut(s) 964
BfrI CTTAAG 1 cut(s) 1316
BfuI GTATCC 1 cut(s) 404
BisI GCNGC 3 cut(s) 132, 288, 303
BlpI GCTNAGC 1 cut(s) 435
BlsI GCNGC 3 cut(s) 133, 289, 304
Bme1390I CCNGG 3 cut(s) 408, 610, 667
Bme18I GGWCC 1 cut(s) 1307
BmeT110I CYCGRG 1 cut(s) 1512
BmgT120I GGNCC 9 cut(s) 279, 362, 512, 572, 606, 607, 830, 1014, 1307
BmiI GGNNCC 3 cut(s) 28, 608, 1149
BmrFI CCNGG 3 cut(s) 408, 610, 667
BmsI GCATC 7 cut(s) 85, 192, 543, 1116, 1183, 1215, 1397
BpiI GAAGAC 1 cut(s) 1080
Bpu10I CCTNAGC 1 cut(s) 1143
Bpu1102I GCTNAGC 1 cut(s) 435
BpuMI CCSGG 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 1428
BsaJI CCNNGG 5 cut(s) 64, 120, 334, 384, 628
BsaWI WCCGGW 2 cut(s) 106, 238
Bsc4I CCNNNNNNNGG 4 cut(s) 98, 581, 603, 615
Bse1I ACTGG 1 cut(s) 347
Bse21I CCTNAGG 1 cut(s) 576
Bse3DI GCAATG 2 cut(s) 504, 1274
Bse8I GATNNNNATC 1 cut(s) 1428
BseBI CCWGG 2 cut(s) 408, 667
BseDI CCNNGG 5 cut(s) 64, 120, 334, 384, 628
BseGI GGATG 6 cut(s) 675, 754, 1109, 1362, 1412, 1442
BseJI GATNNNNATC 1 cut(s) 1428
BseLI CCNNNNNNNGG 4 cut(s) 98, 581, 603, 615
BseMI GCAATG 2 cut(s) 504, 1274
BseMII CTCAG 6 cut(s) 342, 426, 567, 1134, 1361, 1470
BseNI ACTGG 1 cut(s) 347
BsePI GCGCGC 1 cut(s) 115
BseRI GAGGAG 2 cut(s) 176, 831
BseSI GKGCMC 2 cut(s) 610, 640
BseXI GCAGC 2 cut(s) 274, 289
BseYI CCCAGC 2 cut(s) 173, 492
BsgI GTGCAG 1 cut(s) 1438
Bsh1236I CGCG 2 cut(s) 117, 630
BshFI GGCC 9 cut(s) 131, 281, 346, 363, 514, 573, 608, 831, 1015
BshNI GGYRCC 1 cut(s) 26
BsiHKAI GWGCWC 3 cut(s) 441, 640, 1261
BsiHKCI CYCGRG 1 cut(s) 1512
BsiSI CCGG 4 cut(s) 107, 239, 610, 1368
BslI CCNNNNNNNGG 4 cut(s) 98, 581, 603, 615
BsmAI GTCTC 4 cut(s) 542, 582, 853, 1026
BsmI GAATGC 2 cut(s) 322, 361
BsnI GGCC 9 cut(s) 131, 281, 346, 363, 514, 573, 608, 831, 1015
BsoBI CYCGRG 1 cut(s) 1512
Bsp120I GGGCCC 1 cut(s) 606
Bsp1286I GDGCHC 4 cut(s) 441, 610, 640, 1261
Bsp143I GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
Bsp1720I GCTNAGC 1 cut(s) 435
Bsp19I CCATGG 1 cut(s) 334
BspACI CCGC 4 cut(s) 132, 628, 630, 1502
BspANI GGCC 9 cut(s) 131, 281, 346, 363, 514, 573, 608, 831, 1015
BspCNI CTCAG 6 cut(s) 343, 427, 568, 1135, 1360, 1471
BspFNI CGCG 2 cut(s) 117, 630
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 3 cut(s) 28, 608, 1149
BspMAI CTGCAG 1 cut(s) 1462
BspPI GGATC 3 cut(s) 1142, 1155, 1437
BspQI GCTCTTC 2 cut(s) 50, 105
BspT107I GGYRCC 1 cut(s) 26
BspTI CTTAAG 1 cut(s) 1316
BsrBI CCGCTC 1 cut(s) 134
BsrDI GCAATG 2 cut(s) 504, 1274
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 5 cut(s) 64, 120, 334, 384, 628
BssHII GCGCGC 1 cut(s) 115
BssMI GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
BssNAI GTATAC 1 cut(s) 400
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 2 cut(s) 334, 384
Bst1107I GTATAC 1 cut(s) 400
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 2 cut(s) 408, 667
Bst4CI ACNGT 2 cut(s) 779, 1085
Bst6I CTCTTC 4 cut(s) 50, 105, 946, 1005
BstAFI CTTAAG 1 cut(s) 1316
BstC8I GCNNGC 5 cut(s) 100, 117, 348, 361, 1131
BstDEI CTNAG 7 cut(s) 206, 351, 435, 576, 1143, 1347, 1479
BstDSI CCRYGG 3 cut(s) 64, 334, 628
BstENI CCTNNNNNAGG 2 cut(s) 96, 601
BstF5I GGATG 6 cut(s) 675, 754, 1109, 1362, 1412, 1442
BstFNI CGCG 2 cut(s) 117, 630
BstH2I RGCGCY 1 cut(s) 964
BstHHI GCGC 5 cut(s) 117, 119, 459, 912, 963
BstKTI GATC 6 cut(s) 277, 889, 1029, 1150, 1426, 1432
BstMAI GTCTC 4 cut(s) 542, 582, 853, 1026
BstMBI GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
BstMWI GCNNNNNNNGC 3 cut(s) 287, 356, 1139
BstNI CCWGG 2 cut(s) 408, 667
BstNSI RCATGY 1 cut(s) 537
BstSCI CCNGG 3 cut(s) 406, 608, 665
BstSFI CTRYAG 2 cut(s) 778, 1458
BstSLI GKGCMC 2 cut(s) 610, 640
BstUI CGCG 2 cut(s) 117, 630
BstV1I GCAGC 2 cut(s) 274, 289
BstV2I GAAGAC 1 cut(s) 1080
BstX2I RGATCY 1 cut(s) 1147
BstXI CCANNNNNNTGG 1 cut(s) 726
BstYI RGATCY 1 cut(s) 1147
BstZ17I GTATAC 1 cut(s) 400
Bsu36I CCTNAGG 1 cut(s) 576
BsuI GTATCC 1 cut(s) 404
BsuRI GGCC 9 cut(s) 131, 281, 346, 363, 514, 573, 608, 831, 1015
BtgI CCRYGG 3 cut(s) 64, 334, 628
BtsCI GGATG 6 cut(s) 675, 754, 1109, 1362, 1412, 1442
BtsI GCAGTG 2 cut(s) 184, 1455
BtsIMutI CAGTG 3 cut(s) 184, 340, 1455
Cac8I GCNNGC 5 cut(s) 100, 117, 348, 361, 1131
CciI TCATGA 1 cut(s) 390
CfoI GCGC 5 cut(s) 117, 119, 459, 912, 963
Cfr13I GGNCC 9 cut(s) 279, 362, 512, 572, 606, 607, 830, 1014, 1307
Cfr42I CCGCGG 1 cut(s) 631
Csp6I GTAC 2 cut(s) 956, 1313
CspCI CAANNNNNGTGG 2 cut(s) 878, 913
CviQI GTAC 2 cut(s) 956, 1313
DdeI CTNAG 7 cut(s) 206, 351, 435, 576, 1143, 1347, 1479
DpnI GATC 6 cut(s) 276, 888, 1028, 1149, 1425, 1431
DpnII GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
Eam1104I CTCTTC 4 cut(s) 50, 105, 946, 1005
EarI CTCTTC 4 cut(s) 50, 105, 946, 1005
Eco130I CCWWGG 2 cut(s) 334, 384
Eco24I GRGCYC 1 cut(s) 610
Eco47I GGWCC 1 cut(s) 1307
Eco47III AGCGCT 1 cut(s) 962
Eco57I CTGAAG 1 cut(s) 31
Eco81I CCTNAGG 1 cut(s) 576
Eco88I CYCGRG 1 cut(s) 1512
EcoNI CCTNNNNNAGG 2 cut(s) 96, 601
EcoO109I RGGNCCY 3 cut(s) 512, 572, 606
EcoRII CCWGG 2 cut(s) 406, 665
EcoT14I CCWWGG 2 cut(s) 334, 384
EcoT38I GRGCYC 1 cut(s) 610
ErhI CCWWGG 2 cut(s) 334, 384
FalI AAGNNNNNCTT 4 cut(s) 437, 469, 1263, 1295
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 3 cut(s) 132, 288, 303
FokI GGATG 6 cut(s) 682, 741, 1116, 1369, 1419, 1449
FriOI GRGCYC 1 cut(s) 610
Fsp4HI GCNGC 3 cut(s) 132, 288, 303
FspBI CTAG 3 cut(s) 516, 1152, 1182
GlaI GCGC 5 cut(s) 116, 118, 458, 911, 962
GluI GCNGC 3 cut(s) 132, 288, 303
GsaI CCCAGC 2 cut(s) 177, 496
HaeII RGCGCY 1 cut(s) 964
HaeIII GGCC 9 cut(s) 131, 281, 346, 363, 514, 573, 608, 831, 1015
HapII CCGG 4 cut(s) 107, 239, 610, 1368
HhaI GCGC 5 cut(s) 117, 119, 459, 912, 963
Hin6I GCGC 5 cut(s) 115, 117, 457, 910, 961
HinP1I GCGC 5 cut(s) 115, 117, 457, 910, 961
HincII GTYRAC 1 cut(s) 786
HindII GTYRAC 1 cut(s) 786
HinfI GANTC 5 cut(s) 619, 901, 1160, 1267, 1288
HpaII CCGG 4 cut(s) 107, 239, 610, 1368
HphI GGTGA 7 cut(s) 253, 269, 321, 520, 1042, 1220, 1363
Hpy166II GTNNAC 4 cut(s) 400, 528, 638, 786
Hpy188I TCNGA 7 cut(s) 20, 201, 477, 566, 1031, 1423, 1450
Hpy188III TCNNGA 8 cut(s) 137, 313, 391, 587, 623, 1222, 1427, 1494
Hpy8I GTNNAC 4 cut(s) 400, 528, 638, 786
HpyAV CCTTC 6 cut(s) 248, 319, 439, 563, 692, 1027
HpyCH4III ACNGT 2 cut(s) 779, 1085
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 356, 1139
HpyF3I CTNAG 7 cut(s) 206, 351, 435, 576, 1143, 1347, 1479
HspAI GCGC 5 cut(s) 115, 117, 457, 910, 961
KspI CCGCGG 1 cut(s) 631
Kzo9I GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
LguI GCTCTTC 2 cut(s) 50, 105
LmnI GCTCC 1 cut(s) 175
Lsp1109I GCAGC 2 cut(s) 274, 289
LweI GCATC 7 cut(s) 85, 192, 543, 1116, 1183, 1215, 1397
MaeI CTAG 3 cut(s) 516, 1152, 1182
MaeIII GTNAC 5 cut(s) 179, 327, 338, 1186, 1474
MalI GATC 6 cut(s) 276, 888, 1028, 1149, 1425, 1431
MbiI CCGCTC 1 cut(s) 134
MboI GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
MboII GAAGA 9 cut(s) 37, 122, 494, 941, 963, 992, 1085, 1169, 1223
MfeI CAATTG 1 cut(s) 854
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 4 cut(s) 441, 610, 640, 1261
MluCI AATT 7 cut(s) 142, 231, 246, 854, 1046, 1062, 1301
MlyI GAGTC 1 cut(s) 910
MseI TTAA 5 cut(s) 12, 1167, 1317, 1508, 1525
MslI CAYNNNNRTG 1 cut(s) 918
MspA1I CMGCKG 2 cut(s) 287, 630
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 4 cut(s) 107, 239, 610, 1368
MspR9I CCNGG 3 cut(s) 408, 610, 667
MunI CAATTG 1 cut(s) 854
Mva1269I GAATGC 2 cut(s) 322, 361
MvaI CCWGG 2 cut(s) 408, 667
MvnI CGCG 2 cut(s) 117, 630
MwoI GCNNNNNNNGC 3 cut(s) 287, 356, 1139
NciI CCSGG 1 cut(s) 610
NcoI CCATGG 1 cut(s) 334
NdeII GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
NlaIV GGNNCC 3 cut(s) 28, 608, 1149
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 3 cut(s) 179, 327, 338
NspI RCATGY 1 cut(s) 537
PaeR7I CTCGAG 1 cut(s) 1512
PagI TCATGA 1 cut(s) 390
PauI GCGCGC 1 cut(s) 115
PciI ACATGT 1 cut(s) 533
PciSI GCTCTTC 2 cut(s) 50, 105
PctI GAATGC 2 cut(s) 322, 361
PfeI GAWTC 4 cut(s) 619, 1160, 1267, 1288
PkrI GCNGC 3 cut(s) 133, 289, 304
PleI GAGTC 1 cut(s) 909
PpsI GAGTC 1 cut(s) 909
PscI ACATGT 1 cut(s) 533
Psp6I CCWGG 2 cut(s) 406, 665
PspFI CCCAGC 2 cut(s) 173, 492
PspGI CCWGG 2 cut(s) 406, 665
PspN4I GGNNCC 3 cut(s) 28, 608, 1149
PspOMI GGGCCC 1 cut(s) 606
PspPI GGNCC 9 cut(s) 279, 362, 512, 572, 606, 607, 830, 1014, 1307
PspXI VCTCGAGB 1 cut(s) 1512
PsrI GAACNNNNNNTAC 2 cut(s) 1073, 1105
PstI CTGCAG 1 cut(s) 1462
PsuI RGATCY 1 cut(s) 1147
PteI GCGCGC 1 cut(s) 115
PvuII CAGCTG 1 cut(s) 287
RsaI GTAC 2 cut(s) 957, 1314
RsaNI GTAC 2 cut(s) 956, 1313
RseI CAYNNNNRTG 1 cut(s) 918
SacII CCGCGG 1 cut(s) 631
SapI GCTCTTC 2 cut(s) 50, 105
SaqAI TTAA 5 cut(s) 12, 1167, 1317, 1508, 1525
SatI GCNGC 3 cut(s) 132, 288, 303
Sau3AI GATC 6 cut(s) 274, 886, 1026, 1147, 1423, 1429
Sau96I GGNCC 9 cut(s) 279, 362, 512, 572, 606, 607, 830, 1014, 1307
SchI GAGTC 1 cut(s) 910
ScrFI CCNGG 3 cut(s) 408, 610, 667
SduI GDGCHC 4 cut(s) 441, 610, 640, 1261
SfaNI GCATC 7 cut(s) 85, 192, 543, 1116, 1183, 1215, 1397
SfcI CTRYAG 2 cut(s) 778, 1458
Sfr274I CTCGAG 1 cut(s) 1512
Sfr303I CCGCGG 1 cut(s) 631
SgrBI CCGCGG 1 cut(s) 631
SinI GGWCC 1 cut(s) 1307
SlaI CTCGAG 1 cut(s) 1512
SmiMI CAYNNNNRTG 1 cut(s) 918
SmlI CTYRAG 2 cut(s) 1316, 1512
SmoI CTYRAG 2 cut(s) 1316, 1512
Sse9I AATT 7 cut(s) 142, 231, 246, 854, 1046, 1062, 1301
SsiI CCGC 4 cut(s) 132, 628, 630, 1502
SspI AATATT 1 cut(s) 644
SspMI CTAG 3 cut(s) 516, 1152, 1182
StyD4I CCNGG 3 cut(s) 406, 608, 665
StyI CCWWGG 2 cut(s) 334, 384
TaaI ACNGT 2 cut(s) 779, 1085
TaqI TCGA 3 cut(s) 87, 586, 1513
TasI AATT 7 cut(s) 142, 231, 246, 854, 1046, 1062, 1301
TatI WGTACW 2 cut(s) 955, 1312
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 4 cut(s) 619, 1160, 1267, 1288
Tru1I TTAA 5 cut(s) 12, 1167, 1317, 1508, 1525
Tru9I TTAA 5 cut(s) 12, 1167, 1317, 1508, 1525
TscAI CASTG 3 cut(s) 184, 347, 1462
TseFI GTSAC 3 cut(s) 179, 327, 338
TseI GCWGC 2 cut(s) 287, 302
Tsp45I GTSAC 3 cut(s) 179, 327, 338
TspDTI ATGAA 4 cut(s) 743, 1055, 1314, 1373
TspGWI ACGGA 1 cut(s) 1379
TspRI CASTG 3 cut(s) 184, 347, 1462
Vha464I CTTAAG 1 cut(s) 1316
VneI GTGCAC 1 cut(s) 636
VpaK11BI GGWCC 1 cut(s) 1307
XagI CCTNNNNNAGG 2 cut(s) 96, 601
XapI RAATTY 4 cut(s) 142, 231, 1062, 1301
XceI RCATGY 1 cut(s) 537
XhoI CTCGAG 1 cut(s) 1512
XmiI GTMKAC 1 cut(s) 399
XspI CTAG 3 cut(s) 516, 1152, 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.