Prupe.3G025700_v2.0.a1

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000173
Physical Location & Seq
Forward (+)
1876766 .. 1883659
6894 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G025700.1

Sequence Viewer

Length: 2292 bp
ATGTGGAAGCTCAAGTTTGGAGCTGAGGGTGAAAATGTTGACCCTTACTTGTTCAGCACAAACGAGTTTGTGGGAAGGCAGACATGGGAGTTTGATCCTCATGCAGGCACACCTCAAGAGCGAGCTGAGGTTGAAGAGGCTCGTCAAAACTTTTACAACAATCGTTACAAGGTCAAGGCCTCCAGTGAAATCCTCTGGCGAATGCAGCTTCACAGAGAAAGAAATTTCAAGCAAACAATTCCCCAAGTTAAAATCGAAGATGATGATGAGGAACGTAGACATGAAAAAGCCACCGCTGCATTGAAAAGGGCTGTTGCCTACTGGTCTGCCTTGCAATCACCACACGGCCATTGGCCCGCTGAAACCACTGGTCCTTTGTTTTATACTCCTCCCGTTGTCATGGCCCTGTATATTACAGGCCATCTTAATATGGTTTTCTCTGCAGACCATCGTAAGGAAATGCTTTGGTACATGTACTGTCACCAGAACGAAGATGGTGGGTGGGGATTACACATGGAGGACCATAGTATGATGTTTTGTACACTTCTGAACTACATTTGTATGCGTCTACTTGGCGAAGGACCCGATGGTGGTCTAGACAATGCTTGTGCAAGAGCAAGGAAATGGATTCTTGATCATGGTGGTGCAACACACTCTTCATCTTGGGGAAAGATTTGGATGGCAATACTCGGTGTGTATGATTGGGAGGGAAACAACCCTATTCCCCCAGAGCTCTGGAGCTGCCCATCTTTCCTCCCTTTTCATCCAGCAAAAATACTCTGCTATACTCGCATGGCTTACTTGCCTATGTCACATTTGTATGGGAAAAGATTTGTTGGCCGCATCACACCCCTCATTCTGCAACTGAGAGAAGAAATCTACAATGAACCTTACAATGAAATTAAATGGAGCAAAGTGCGCCATCTGTGTGCAAAAGAGGATAACTGCCATCCCCATGGTAAGTTACAATCCTTGATGTGGGATAGTCTTCACACAATCTGTGAGCCTCTTTTCACTCGCTGGCCCTTCAAAAAGTTCAGAGAGAAGGCTCTTCAAGAAACCAGTAAACACATTCATTATGAAGACGAGAATACTCGATACATTACTATTGGAGTTGTGATAAAGCCATTAAATATGCTTGCTTGCTGGGCTGAAGATCCGAATGGAGAATCTTACAAGAAGCATCTTGCAAGGATTGCAGATTTCATATGGGTTGCAGAAGATGGAATGAAAATGCAGAGTTTTGGTAGCCAGATGTGGGATGCTAGTTTTGCCATTCAAGCTTTGCTTGCTGCAAATCTGAATGATGAACTTGGATCTGTACTTAAGAAAGGACATGACTTCCTTAAGAAATCTCAGGTTAGGGATAATCCTTCTGGTGACTTTTTAGCCTATTTTCGCCACATTTCTAAAGGAGGATGGACTTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGTACTGCAGAAGCTTTGAAGAGTTGCTTGTTGTTATCGATGCTGCCACCACAACTCGTCGGTGAACAACTAGAACCTGAGCGTTTATATGATGCTGTCAATGTCATACTTTCTCTGCAGAGTCCAAATGGTGGTGTATCAGCCTGGGAACCGGCAGGAGCTCCAAAATGGTTGGAGTGGCTCAACCCTATAGAATTTCTCGGGGATCTCGTCATCGAATATGAGCACGTCGAGTGCACATCATCTTCAATCCGGGCATTAGCTTTGTTTAGGAAGTTATACCCTGCCCACAGAAAGAAACAGATAGATAATTTCATCACAACTGCTGCAGGGTACATTGAAGACATACAAAATCCTGATGGGTCATGGTATGGAAACTGGGGAATCTGCTTCATTTATGGAACATGGTTTGCAATCAGAGGGTTAGAGGCTGCTGGCAAGACTTACAATAATTGTGCGGCTATACGCCGAGGTGTTGAATTTTTACTCAAAACTCAGAGAGATGATGGTGGATGGGGAGAGAGCTACATTTCTTGTACAAACAAGGTCTATACACCTCTTGAAGGAGACCGATCCAATTTGGTGCAGACTGCAATGGGATTAATGGGTTTAATTCATGGTGGACAGGCGGAGAGAGACCCTACTCCTATTCACCAAGCTGCAAAGTTGTTGATCAATTCTCAATTGGAAAATGGCGATTTCCCCCAGCAGGAAGTGATGGGAGTTTTCATGAGGAATGCCATGTTAAACTACGCAGCATACAGGAATTCTATCCCAATTTGGGCTCTTGCAGAATACTGCCATATGGTTCCAAAGCCTCTCTATGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

764

Amino Acids

87.5

Weight (kDa)

6.14

Isoelectric Point (pI)

44.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1592
AccI GTMKAC 2 cut(s) 277, 568
AciI CCGC 5 cut(s) 294, 357, 841, 1919, 2090
AclWI GGATC 5 cut(s) 89, 1151, 1324, 1674, 2028
AcoI YGGCCR 2 cut(s) 346, 838
AcsI RAATTY 4 cut(s) 223, 1655, 1940, 2227
AcuI CTGAAG 1 cut(s) 1173
AfaI GTAC 7 cut(s) 470, 476, 541, 1323, 1465, 1796, 1999
AfiI CCNNNNNNNGG 9 cut(s) 104, 454, 590, 978, 1258, 1592, 2024, 2170, 2242
AflII CTTAAG 2 cut(s) 1325, 1346
AflIII ACRYGT 1 cut(s) 471
AjiI CACGTC 1 cut(s) 1690
AjnI CCWGG 1 cut(s) 1604
Alw21I GWGCWC 4 cut(s) 735, 1624, 1689, 1700
Alw26I GTCTC 2 cut(s) 2022, 2091
Alw44I GTGCAC 1 cut(s) 1696
AlwI GGATC 5 cut(s) 89, 1151, 1324, 1674, 2028
Ama87I CYCGRG 1 cut(s) 1661
AoxI GGCC 7 cut(s) 177, 346, 353, 402, 418, 838, 1022
ApaLI GTGCAC 1 cut(s) 1696
ApeKI GCWGC 9 cut(s) 205, 296, 741, 1292, 1504, 1787, 1892, 2120, 2216
ApoI RAATTY 4 cut(s) 223, 1655, 1940, 2227
AseI ATTAAT 1 cut(s) 2063
AspLEI GCGC 1 cut(s) 921
AspS9I GGNCC 6 cut(s) 354, 371, 403, 520, 581, 1023
AsuC2I CCSGG 1 cut(s) 1715
AsuHPI GGTGA 6 cut(s) 41, 330, 473, 1391, 1535, 2105
AvaI CYCGRG 1 cut(s) 1661
AvaII GGWCC 3 cut(s) 371, 520, 581
BaeGI GKGCMC 1 cut(s) 1700
BanII GRGCYC 3 cut(s) 735, 1624, 2248
BbsI GAAGAC 3 cut(s) 980, 1089, 1809
Bbv12I GWGCWC 4 cut(s) 735, 1624, 1689, 1700
BbvCI CCTCAGC 2 cut(s) 24, 126
BbvI GCAGC 9 cut(s) 217, 283, 728, 1279, 1491, 1774, 1879, 2107, 2228
BceAI ACGGC 1 cut(s) 361
BciT130I CCWGG 1 cut(s) 1606
BclI TGATCA 3 cut(s) 634, 1432, 2133
BcnI CCSGG 1 cut(s) 1715
BcoDI GTCTC 2 cut(s) 2022, 2091
BfaI CTAG 3 cut(s) 596, 1266, 1532
BfmI CTRYAG 5 cut(s) 441, 1467, 1577, 1650, 1788
BfrI CTTAAG 2 cut(s) 1325, 1346
Bme1390I CCNGG 2 cut(s) 1606, 1715
Bme18I GGWCC 3 cut(s) 371, 520, 581
BmeT110I CYCGRG 1 cut(s) 1661
BmgBI CACGTC 1 cut(s) 1690
BmgT120I GGNCC 6 cut(s) 354, 371, 403, 520, 581, 1023
BmiI GGNNCC 3 cut(s) 583, 1611, 2271
BmrFI CCNGG 2 cut(s) 1606, 1715
BmrI ACTGGG 1 cut(s) 1849
BmsI GCATC 5 cut(s) 852, 1192, 1252, 1491, 1543
BmuI ACTGGG 1 cut(s) 1849
BpiI GAAGAC 3 cut(s) 980, 1089, 1809
BpmI CTGGAG 2 cut(s) 166, 757
Bpu10I CCTNAGC 3 cut(s) 24, 126, 1539
BpuEI CTTGAG 1 cut(s) 99
BpuMI CCSGG 1 cut(s) 1715
Bsa29I ATCGAT 1 cut(s) 1499
BsaI GGTCTC 2 cut(s) 2022, 2091
BsaJI CCNNGG 4 cut(s) 955, 1441, 1605, 1930
Bsc4I CCNNNNNNNGG 9 cut(s) 104, 454, 590, 978, 1258, 1592, 2024, 2170, 2242
Bse118I RCCGGY 1 cut(s) 1612
Bse1I ACTGG 5 cut(s) 183, 326, 373, 1062, 1844
Bse3DI GCAATG 1 cut(s) 2061
BseBI CCWGG 1 cut(s) 1606
BseCI ATCGAT 1 cut(s) 1499
BseDI CCNNGG 4 cut(s) 955, 1441, 1605, 1930
BseGI GGATG 7 cut(s) 684, 763, 949, 1267, 1424, 1451, 1979
BseLI CCNNNNNNNGG 9 cut(s) 104, 454, 590, 978, 1258, 1592, 2024, 2170, 2242
BseMI GCAATG 1 cut(s) 2061
BseMII CTCAG 6 cut(s) 15, 117, 857, 1370, 1530, 1970
BseNI ACTGG 5 cut(s) 183, 326, 373, 1062, 1844
BseRI GAGGAG 1 cut(s) 378
BseSI GKGCMC 1 cut(s) 1700
BseXI GCAGC 9 cut(s) 217, 283, 728, 1279, 1491, 1774, 1879, 2107, 2228
BseYI CCCAGC 2 cut(s) 1146, 2166
BsgI GTGCAG 1 cut(s) 2066
BshFI GGCC 7 cut(s) 179, 348, 355, 404, 420, 840, 1024
BshVI ATCGAT 1 cut(s) 1499
BsiHKAI GWGCWC 4 cut(s) 735, 1624, 1689, 1700
BsiHKCI CYCGRG 1 cut(s) 1661
BsiSI CCGG 2 cut(s) 1613, 1714
BslI CCNNNNNNNGG 9 cut(s) 104, 454, 590, 978, 1258, 1592, 2024, 2170, 2242
BsmAI GTCTC 2 cut(s) 2022, 2091
BsmI GAATGC 2 cut(s) 207, 2203
BsnI GGCC 7 cut(s) 179, 348, 355, 404, 420, 840, 1024
Bso31I GGTCTC 2 cut(s) 2022, 2091
BsoBI CYCGRG 1 cut(s) 1661
Bsp1286I GDGCHC 5 cut(s) 735, 1624, 1689, 1700, 2248
Bsp1407I TGTACA 2 cut(s) 539, 1997
Bsp143I GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
Bsp19I CCATGG 2 cut(s) 955, 1441
BspACI CCGC 5 cut(s) 294, 357, 841, 1919, 2090
BspANI GGCC 7 cut(s) 179, 348, 355, 404, 420, 840, 1024
BspCNI CTCAG 6 cut(s) 16, 118, 858, 1369, 1531, 1969
BspDI ATCGAT 1 cut(s) 1499
BspHI TCATGA 1 cut(s) 2190
BspLI GGNNCC 3 cut(s) 583, 1611, 2271
BspMAI CTGCAG 4 cut(s) 445, 1471, 1581, 1792
BspPI GGATC 5 cut(s) 89, 1151, 1324, 1674, 2028
BspQI GCTCTTC 1 cut(s) 1056
BspTI CTTAAG 2 cut(s) 1325, 1346
BspTNI GGTCTC 2 cut(s) 2022, 2091
BsrDI GCAATG 1 cut(s) 2061
BsrFI RCCGGY 1 cut(s) 1612
BsrGI TGTACA 2 cut(s) 539, 1997
BsrI ACTGG 5 cut(s) 183, 326, 373, 1062, 1844
BssAI RCCGGY 1 cut(s) 1612
BssECI CCNNGG 4 cut(s) 955, 1441, 1605, 1930
BssMI GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
BssT1I CCWWGG 2 cut(s) 955, 1441
Bst2UI CCWGG 1 cut(s) 1606
Bst4CI ACNGT 1 cut(s) 479
Bst6I CTCTTC 4 cut(s) 129, 661, 1056, 1475
BstAFI CTTAAG 2 cut(s) 1325, 1346
BstAPI GCANNNNNTGC 1 cut(s) 1196
BstAUI TGTACA 2 cut(s) 539, 1997
BstC8I GCNNGC 8 cut(s) 106, 123, 357, 1022, 1140, 1144, 1290, 1897
BstDEI CTNAG 6 cut(s) 24, 126, 866, 1356, 1539, 1956
BstDSI CCRYGG 2 cut(s) 955, 1441
BstENI CCTNNNNNAGG 2 cut(s) 102, 2022
BstF5I GGATG 7 cut(s) 684, 763, 949, 1267, 1424, 1451, 1979
BstHHI GCGC 1 cut(s) 921
BstKTI GATC 8 cut(s) 97, 637, 1159, 1319, 1435, 1669, 2036, 2136
BstMAI GTCTC 2 cut(s) 2022, 2091
BstMBI GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
BstMWI GCNNNNNNNGC 9 cut(s) 205, 296, 789, 918, 1148, 1196, 1271, 1280, 1289
BstNI CCWGG 1 cut(s) 1606
BstNSI RCATGY 1 cut(s) 475
BstSCI CCNGG 2 cut(s) 1604, 1713
BstSFI CTRYAG 5 cut(s) 441, 1467, 1577, 1650, 1788
BstSLI GKGCMC 1 cut(s) 1700
BstV1I GCAGC 9 cut(s) 217, 283, 728, 1279, 1491, 1774, 1879, 2107, 2228
BstV2I GAAGAC 3 cut(s) 980, 1089, 1809
BstX2I RGATCY 3 cut(s) 1156, 1316, 1666
BstXI CCANNNNNNTGG 2 cut(s) 735, 956
BstYI RGATCY 3 cut(s) 1156, 1316, 1666
Bsu15I ATCGAT 1 cut(s) 1499
BsuRI GGCC 7 cut(s) 179, 348, 355, 404, 420, 840, 1024
BsuTUI ATCGAT 1 cut(s) 1499
BtgI CCRYGG 2 cut(s) 955, 1441
BtrI CACGTC 1 cut(s) 1690
BtsCI GGATG 7 cut(s) 684, 763, 949, 1267, 1424, 1451, 1979
BtsIMutI CAGTG 2 cut(s) 190, 366
Cac8I GCNNGC 8 cut(s) 106, 123, 357, 1022, 1140, 1144, 1290, 1897
CciI TCATGA 1 cut(s) 2190
CfoI GCGC 1 cut(s) 921
Cfr10I RCCGGY 1 cut(s) 1612
Cfr13I GGNCC 6 cut(s) 354, 371, 403, 520, 581, 1023
ClaI ATCGAT 1 cut(s) 1499
CseI GACGC 1 cut(s) 554
Csp6I GTAC 7 cut(s) 469, 475, 540, 1322, 1464, 1795, 1998
CviQI GTAC 7 cut(s) 469, 475, 540, 1322, 1464, 1795, 1998
DdeI CTNAG 6 cut(s) 24, 126, 866, 1356, 1539, 1956
DpnI GATC 8 cut(s) 96, 636, 1158, 1318, 1434, 1668, 2035, 2135
DpnII GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
EaeI YGGCCR 2 cut(s) 346, 838
Eam1104I CTCTTC 4 cut(s) 129, 661, 1056, 1475
EarI CTCTTC 4 cut(s) 129, 661, 1056, 1475
EciI GGCGGA 1 cut(s) 2105
Ecl136II GAGCTC 2 cut(s) 733, 1622
Eco130I CCWWGG 2 cut(s) 955, 1441
Eco147I AGGCCT 1 cut(s) 179
Eco24I GRGCYC 3 cut(s) 735, 1624, 2248
Eco31I GGTCTC 2 cut(s) 2022, 2091
Eco47I GGWCC 3 cut(s) 371, 520, 581
Eco53kI GAGCTC 2 cut(s) 733, 1622
Eco57I CTGAAG 1 cut(s) 1173
Eco88I CYCGRG 1 cut(s) 1661
EcoICRI GAGCTC 2 cut(s) 733, 1622
EcoNI CCTNNNNNAGG 2 cut(s) 102, 2022
EcoO109I RGGNCCY 1 cut(s) 581
EcoRI GAATTC 1 cut(s) 2227
EcoRII CCWGG 1 cut(s) 1604
EcoT14I CCWWGG 2 cut(s) 955, 1441
EcoT38I GRGCYC 3 cut(s) 735, 1624, 2248
ErhI CCWWGG 2 cut(s) 955, 1441
FalI AAGNNNNNCTT 4 cut(s) 1272, 1304, 1472, 1504
FauI CCCGC 1 cut(s) 364
FauNDI CATATG 2 cut(s) 1208, 2265
FbaI TGATCA 3 cut(s) 634, 1432, 2133
FblI GTMKAC 2 cut(s) 277, 568
FokI GGATG 7 cut(s) 691, 750, 936, 1274, 1431, 1458, 1986
FriOI GRGCYC 3 cut(s) 735, 1624, 2248
FspBI CTAG 3 cut(s) 596, 1266, 1532
GlaI GCGC 1 cut(s) 920
GsaI CCCAGC 2 cut(s) 1150, 2170
GsuI CTGGAG 2 cut(s) 166, 757
HaeIII GGCC 7 cut(s) 179, 348, 355, 404, 420, 840, 1024
HapII CCGG 2 cut(s) 1613, 1714
HgaI GACGC 1 cut(s) 554
HhaI GCGC 1 cut(s) 921
Hin6I GCGC 1 cut(s) 919
HinP1I GCGC 1 cut(s) 919
HincII GTYRAC 1 cut(s) 40
HindII GTYRAC 1 cut(s) 40
HindIII AAGCTT 2 cut(s) 1281, 1473
HinfI GANTC 4 cut(s) 628, 1169, 1582, 1845
HpaII CCGG 2 cut(s) 1613, 1714
HphI GGTGA 6 cut(s) 41, 330, 473, 1391, 1535, 2105
Hpy166II GTNNAC 8 cut(s) 40, 278, 542, 569, 1067, 1526, 1698, 2084
Hpy188I TCNGA 8 cut(s) 549, 1040, 1161, 1302, 1432, 1459, 1880, 1959
Hpy188III TCNNGA 9 cut(s) 116, 596, 632, 736, 1055, 1436, 1817, 2021, 2191
Hpy8I GTNNAC 8 cut(s) 40, 278, 542, 569, 1067, 1526, 1698, 2084
Hpy99I CGWCG 2 cut(s) 1523, 1694
HpyAV CCTTC 6 cut(s) 69, 572, 1036, 1039, 1383, 2018
HpyCH4III ACNGT 1 cut(s) 479
HpyCH4IV ACGT 2 cut(s) 274, 1689
HpyF10VI GCNNNNNNNGC 9 cut(s) 205, 296, 789, 918, 1148, 1196, 1271, 1280, 1289
HpyF3I CTNAG 6 cut(s) 24, 126, 866, 1356, 1539, 1956
HpySE526I ACGT 2 cut(s) 274, 1689
HspAI GCGC 1 cut(s) 919
Ksp22I TGATCA 3 cut(s) 634, 1432, 2133
Kzo9I GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
LguI GCTCTTC 1 cut(s) 1056
LmnI GCTCC 5 cut(s) 20, 738, 909, 1619, 1627
Lsp1109I GCAGC 9 cut(s) 217, 283, 728, 1279, 1491, 1774, 1879, 2107, 2228
LweI GCATC 5 cut(s) 852, 1192, 1252, 1491, 1543
MaeI CTAG 3 cut(s) 596, 1266, 1532
MaeII ACGT 2 cut(s) 274, 1689
MaeIII GTNAC 5 cut(s) 164, 479, 810, 963, 1379
MalI GATC 8 cut(s) 96, 636, 1158, 1318, 1434, 1668, 2035, 2135
MboI GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
MfeI CAATTG 1 cut(s) 2144
MflI RGATCY 3 cut(s) 1156, 1316, 1666
MhlI GDGCHC 5 cut(s) 735, 1624, 1689, 1700, 2248
MlyI GAGTC 1 cut(s) 1591
MmeI TCCRAC 1 cut(s) 1614
MseI TTAA 9 cut(s) 249, 426, 903, 1130, 1326, 1347, 2063, 2072, 2207
MslI CAYNNNNRTG 5 cut(s) 560, 642, 819, 927, 954
MspA1I CMGCKG 2 cut(s) 296, 359
MspCI CTTAAG 2 cut(s) 1325, 1346
MspI CCGG 2 cut(s) 1613, 1714
MspR9I CCNGG 2 cut(s) 1606, 1715
MunI CAATTG 1 cut(s) 2144
Mva1269I GAATGC 2 cut(s) 207, 2203
MvaI CCWGG 1 cut(s) 1606
MwoI GCNNNNNNNGC 9 cut(s) 205, 296, 789, 918, 1148, 1196, 1271, 1280, 1289
NciI CCSGG 1 cut(s) 1715
NcoI CCATGG 2 cut(s) 955, 1441
NdeI CATATG 2 cut(s) 1208, 2265
NdeII GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
NlaIV GGNNCC 3 cut(s) 583, 1611, 2271
NmeAIII GCCGAG 1 cut(s) 1955
NmuCI GTSAC 3 cut(s) 479, 810, 1379
NspI RCATGY 1 cut(s) 475
PagI TCATGA 1 cut(s) 2190
PceI AGGCCT 1 cut(s) 179
PciI ACATGT 1 cut(s) 471
PciSI GCTCTTC 1 cut(s) 1056
PcsI WCGNNNNNNNCGW 1 cut(s) 1668
PctI GAATGC 2 cut(s) 207, 2203
PfeI GAWTC 3 cut(s) 628, 1169, 1845
PflMI CCANNNNNTGG 1 cut(s) 1592
PleI GAGTC 1 cut(s) 1590
PpsI GAGTC 1 cut(s) 1590
PpuMI RGGWCCY 1 cut(s) 581
PscI ACATGT 1 cut(s) 471
PshBI ATTAAT 1 cut(s) 2063
Psp124BI GAGCTC 2 cut(s) 735, 1624
Psp5II RGGWCCY 1 cut(s) 581
Psp6I CCWGG 1 cut(s) 1604
PspFI CCCAGC 2 cut(s) 1146, 2166
PspGI CCWGG 1 cut(s) 1604
PspN4I GGNNCC 3 cut(s) 583, 1611, 2271
PspPI GGNCC 6 cut(s) 354, 371, 403, 520, 581, 1023
PspPPI RGGWCCY 1 cut(s) 581
PstI CTGCAG 4 cut(s) 445, 1471, 1581, 1792
PsuI RGATCY 3 cut(s) 1156, 1316, 1666
RsaI GTAC 7 cut(s) 470, 476, 541, 1323, 1465, 1796, 1999
RsaNI GTAC 7 cut(s) 469, 475, 540, 1322, 1464, 1795, 1998
RseI CAYNNNNRTG 5 cut(s) 560, 642, 819, 927, 954
SacI GAGCTC 2 cut(s) 735, 1624
SapI GCTCTTC 1 cut(s) 1056
SaqAI TTAA 9 cut(s) 249, 426, 903, 1130, 1326, 1347, 2063, 2072, 2207
Sau3AI GATC 8 cut(s) 94, 634, 1156, 1316, 1432, 1666, 2033, 2133
Sau96I GGNCC 6 cut(s) 354, 371, 403, 520, 581, 1023
SchI GAGTC 1 cut(s) 1591
ScrFI CCNGG 2 cut(s) 1606, 1715
SduI GDGCHC 5 cut(s) 735, 1624, 1689, 1700, 2248
SfaNI GCATC 5 cut(s) 852, 1192, 1252, 1491, 1543
SfcI CTRYAG 5 cut(s) 441, 1467, 1577, 1650, 1788
SinI GGWCC 3 cut(s) 371, 520, 581
SmiMI CAYNNNNRTG 5 cut(s) 560, 642, 819, 927, 954
SmlI CTYRAG 4 cut(s) 11, 114, 1325, 1346
SmoI CTYRAG 4 cut(s) 11, 114, 1325, 1346
SseBI AGGCCT 1 cut(s) 179
SsiI CCGC 5 cut(s) 294, 357, 841, 1919, 2090
SspMI CTAG 3 cut(s) 596, 1266, 1532
SstI GAGCTC 2 cut(s) 735, 1624
StuI AGGCCT 1 cut(s) 179
StyD4I CCNGG 2 cut(s) 1604, 1713
StyI CCWWGG 2 cut(s) 955, 1441
TaaI ACNGT 1 cut(s) 479
TaiI ACGT 2 cut(s) 277, 1692
TaqI TCGA 5 cut(s) 255, 1096, 1499, 1677, 1692
TaqII GACCGA 1 cut(s) 2046
TatI WGTACW 5 cut(s) 474, 539, 1321, 1463, 1997
TauI GCSGC 2 cut(s) 843, 1922
TfiI GAWTC 3 cut(s) 628, 1169, 1845
Tru1I TTAA 9 cut(s) 249, 426, 903, 1130, 1326, 1347, 2063, 2072, 2207
Tru9I TTAA 9 cut(s) 249, 426, 903, 1130, 1326, 1347, 2063, 2072, 2207
TscAI CASTG 2 cut(s) 190, 373
TseFI GTSAC 3 cut(s) 479, 810, 1379
TseI GCWGC 9 cut(s) 205, 296, 741, 1292, 1504, 1787, 1892, 2120, 2216
Tsp45I GTSAC 3 cut(s) 479, 810, 1379
TspRI CASTG 2 cut(s) 190, 373
Van91I CCANNNNNTGG 1 cut(s) 1592
Vha464I CTTAAG 2 cut(s) 1325, 1346
VneI GTGCAC 1 cut(s) 1696
VpaK11BI GGWCC 3 cut(s) 371, 520, 581
VspI ATTAAT 1 cut(s) 2063
XagI CCTNNNNNAGG 2 cut(s) 102, 2022
XapI RAATTY 4 cut(s) 223, 1655, 1940, 2227
XbaI TCTAGA 1 cut(s) 595
XceI RCATGY 1 cut(s) 475
XcmI CCANNNNNNNNNTGG 2 cut(s) 348, 491
XmiI GTMKAC 2 cut(s) 277, 568
XspI CTAG 3 cut(s) 596, 1266, 1532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.