RchiOBHm_Chr2g0136221

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000173
Physical Location & Seq
Reverse (-)
53585553 .. 53598815
13263 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50704

Sequence Viewer

Length: 2301 bp
ATGTGGAAGCTTAGGTTTGGAAACGAAGGTGCAAATAATGACCCTTACAGTCCTTACTTGTTTAGCACAAACAACTTTTATGGGAGGCAAACATGGGAGTTTGACCCGGCTGCCGGTACGCCTGAAGAGCGAGCAGAGGTCGAAGAAGTTCGACTAAATTTTTACAACAATCGTCACCAGGTCCAGGCTTGCAGTGACCTCCTCTGCCGAATGCAGGTGCTTCTGGGAGAGAAAAAGTTCAAACAAAAGATTCCCCAAGTAAAGGTGGAGGATGGTGAGGACTGTACATATGAAAAGGCCACCGCTGCATTCACAAGGGCAGCTACCTTCTACTCTGCCTTGCAATCACCTCACGGCCATTGGCCTGCTGAACATGCTGGTCTCATGTTTTATATTCCTTCCTTGGTCATACCGCTCTATATTATGGGGCATCTTAGTAAGGTGTTCTCTGCAGAGCATTATAAGGAAATGCTTAGATATATATACTGTCATCAGAACAAGGATGGTGGGTGGGGATTGCACATACAGGGCCCTAGTATGATGTATTGTACACTTCTGAACTACATTTGCATGCGTCTACTTGGAGAAGGACCTGATGGTGGTTCAAACAACGCTTGTGCAAGAGCACGCAAGTGGATTCTTGATCATGGTGGTGCAACACATTCATCATCCTGGGGAAAGACTTTTATGGCAATACTCGGTGTGTATGAGTGGGAGGGATGCAACCCGATTCCCCCTGAGTTTTGGATTTTCCCGTCTTTGTTCCCTTTTCATCCAGCAAAAATGTACTGCTACTGCCGGTTGACTTACTTGCCTATGTCGCATCTGTTTGGGAAAAGATTTGTTGGCCCCATCACCCCTCTCATTCTACAACTGAGAGAAGAAATTTACAATGAGCCATACAATGAAATTCAATGGGGCAAAGTACGCCATCTTTGTGCAAAGGAGGATAACTACAATCCCCATGGCAAGTTACAATGTTTGTTGTGGGATACTCTGAACACAGTTTATGAGCCTCTTCTTTCTTGCTGGCCCTTCAATAAGTTGAGAGAGAAGGCTCTTCAAGAAACTATTGAACACATTCATTATGAAGATGAAAATAGTCGATACATAACAATTGGATGTGCGGAAAAGCCATTAATGATGCTTGCTTGCTGGATTGAAGATCCGAATGGAGAACCCTTTAAGAAGCATCTTGCAAGAGTTATAGATTACATATGGGTTGCAGAAGATGGAATAACTACGCAGAGTTTTGGTAGCCAGGCATGGGATGCTAGTCTTTCTGTTCAAGCTTTGCTTGCTGGAAATCTCACTGATGAAATTGGATCTGTACTTCAGAAAGCACATGAATTCCTAAAAAAATCTCAGGTTAGGGATAATCCTTCTGGTGACTTCTTAGCTCATTACCGTCACATTTCTAAAGGTGCTTGGACTTTGTCTGACCGAGATCATGGATGGCAAGTTTCTGATTGTACTGCAGAGGGTTTGAAGTGTTGCCTATTGTTTTCAATGATGCCGACACGAATCGTGGGTGAACCAATTGACTCTGAGCGCTTTTATGATGCTGTCAATGTCATACTTTCTCTGCAAAATCCAAATGGTGGTGTATCAGCCTGGCAGCCAACAGGAGCTCCACAATGGTTGGAGTGGTTCAATCCAGTAGAATTTCTCGAGAAAGTCGTCATTGAATACGAGTATGTTGAGTGCACTTCATCTTCAATTCAAGCGTTAGCTTTATTCAGGAAGTTATACCCTGGGCATAGAAAGAAACATATCGATGATTTCATCACAAATGCAGCATGTTACCTTGAAGATATGCAGACACCTGATGGCTCATGGTATGGAATATGGGGAATCTGCTTCGTCTATGGAACATGGTTTGCAATTCTAGGGTTGAAGGCTGCTGGTAGAACTTACAAAAATTGTGAGGCGATACGCAGAGGTGTTGAATTTTTACTCAAAATACAGAGAAATGATGGTGGTTGGGGAGAGAGCTATACTTCTTGTACAAACAAGATCTATACACCTCTTGAAGGCGAACGGTCAAATTTGGTGCAGACTGCAATAGGACTAATGGGATTAATTCATGGTGGACAGGCCGAGAGAGACCCTACTCCCATTCACAGAGCTGCGAAGCTTTTGGTTAATTCTCAATTGGAAAATGGAGATTTCCCCCAACAGGAACTGATGGGGGCTGCCAATGTCAATATCATGTTACACTATGCAGCATACAGGAATATCTTCCCAATTTGGGCTCTCGGAGAATATCGTTCCCTTCCCTCCTTTTGGATAGACGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

766

Amino Acids

87.55

Weight (kDa)

5.97

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 106 - 367 2.6e-37 Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C PF13243 420 - 757 1.1e-44 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 462
AarI CACCTGC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 205
AccB7I CCANNNNNTGG 1 cut(s) 1601
AccBSI CCGCTC 1 cut(s) 415
AccI GTMKAC 1 cut(s) 577
AciI CCGC 3 cut(s) 303, 413, 1127
AclWI GGATC 2 cut(s) 1160, 1333
AcoI YGGCCR 1 cut(s) 355
AcsI RAATTY 7 cut(s) 157, 885, 909, 1349, 1664, 1949, 2047
AcuI CTGAAG 2 cut(s) 144, 1319
AfaI GTAC 8 cut(s) 118, 286, 550, 788, 927, 1332, 1474, 2008
AfeI AGCGCT 1 cut(s) 1553
AflIII ACRYGT 1 cut(s) 2295
AjiI CACGTC 1 cut(s) 2296
AjnI CCWGG 6 cut(s) 177, 183, 671, 1260, 1613, 1753
AleI CACNNNNGTG 1 cut(s) 631
AluBI AGCT 9 cut(s) 10, 323, 1292, 1400, 1631, 1733, 1995, 2129, 2137
AluI AGCT 9 cut(s) 10, 323, 1292, 1400, 1631, 1733, 1995, 2129, 2137
Alw21I GWGCWC 3 cut(s) 628, 1633, 1709
Alw26I GTCTC 2 cut(s) 386, 2100
Alw44I GTGCAC 1 cut(s) 1705
AlwI GGATC 2 cut(s) 1160, 1333
AlwNI CAGNNNCTG 1 cut(s) 2185
Ama87I CYCGRG 1 cut(s) 1670
Aor51HI AGCGCT 1 cut(s) 1553
AoxI GGCC 7 cut(s) 297, 355, 362, 529, 847, 1031, 2097
ApaI GGGCCC 1 cut(s) 533
ApaLI GTGCAC 1 cut(s) 1705
ApeKI GCWGC 9 cut(s) 110, 305, 320, 1618, 1796, 1901, 2129, 2195, 2225
ApoI RAATTY 7 cut(s) 157, 885, 909, 1349, 1664, 1949, 2047
AseI ATTAAT 2 cut(s) 1139, 2081
Asp700I GAANNNNTTC 4 cut(s) 147, 236, 1080, 2240
AspLEI GCGC 1 cut(s) 1554
AspS9I GGNCC 6 cut(s) 181, 529, 530, 590, 848, 1032
AsuC2I CCSGG 1 cut(s) 107
AsuHPI GGTGA 6 cut(s) 167, 287, 339, 847, 1400, 1544
AvaI CYCGRG 1 cut(s) 1670
AvaII GGWCC 2 cut(s) 181, 590
BaeGI GKGCMC 2 cut(s) 533, 1709
BanII GRGCYC 3 cut(s) 533, 1633, 2257
Bbv12I GWGCWC 3 cut(s) 628, 1633, 1709
BbvI GCAGC 9 cut(s) 97, 292, 332, 1630, 1808, 1888, 2116, 2182, 2237
BceAI ACGGC 1 cut(s) 370
BciT130I CCWGG 6 cut(s) 179, 185, 673, 1262, 1615, 1755
BciVI GTATCC 1 cut(s) 985
BclI TGATCA 1 cut(s) 643
BcnI CCSGG 1 cut(s) 107
BcoDI GTCTC 2 cut(s) 386, 2100
BfaI CTAG 3 cut(s) 534, 1275, 1889
BfmI CTRYAG 2 cut(s) 450, 1476
BfoI RGCGCY 1 cut(s) 1555
BfuAI ACCTGC 1 cut(s) 205
BfuI GTATCC 1 cut(s) 985
BglII AGATCT 1 cut(s) 2016
BisI GCNGC 9 cut(s) 111, 306, 321, 1619, 1797, 1902, 2130, 2196, 2226
BlsI GCNGC 9 cut(s) 112, 307, 322, 1620, 1798, 1903, 2131, 2197, 2227
Bme1390I CCNGG 7 cut(s) 107, 179, 185, 673, 1262, 1615, 1755
Bme18I GGWCC 2 cut(s) 181, 590
BmeT110I CYCGRG 1 cut(s) 1670
BmgBI CACGTC 1 cut(s) 2296
BmgT120I GGNCC 6 cut(s) 181, 529, 530, 590, 848, 1032
BmiI GGNNCC 2 cut(s) 531, 850
BmrFI CCNGG 7 cut(s) 107, 179, 185, 673, 1262, 1615, 1755
BmsI GCATC 8 cut(s) 439, 710, 832, 1134, 1201, 1261, 1503, 1552
Bpu10I CCTNAGC 1 cut(s) 11
BpuMI CCSGG 1 cut(s) 107
Bsa29I ATCGAT 1 cut(s) 1776
BsaI GGTCTC 2 cut(s) 386, 2100
BsaJI CCNNGG 5 cut(s) 402, 672, 964, 1753, 1754
BsaXI ACNNNNNCTCC 2 cut(s) 1615, 1645
Bse118I RCCGGY 2 cut(s) 113, 798
Bse1I ACTGG 1 cut(s) 1658
BseBI CCWGG 6 cut(s) 179, 185, 673, 1262, 1615, 1755
BseCI ATCGAT 1 cut(s) 1776
BseDI CCNNGG 5 cut(s) 402, 672, 964, 1753, 1754
BseGI GGATG 8 cut(s) 277, 508, 668, 725, 772, 1127, 1276, 1460
BseMII CTCAG 4 cut(s) 729, 866, 1379, 1539
BseNI ACTGG 1 cut(s) 1658
BseRI GAGGAG 1 cut(s) 191
BseSI GKGCMC 2 cut(s) 533, 1709
BseXI GCAGC 9 cut(s) 97, 292, 332, 1630, 1808, 1888, 2116, 2182, 2237
BsgI GTGCAG 1 cut(s) 2075
BshFI GGCC 7 cut(s) 299, 357, 364, 531, 849, 1033, 2099
BshVI ATCGAT 1 cut(s) 1776
BsiHKAI GWGCWC 3 cut(s) 628, 1633, 1709
BsiHKCI CYCGRG 1 cut(s) 1670
BsiSI CCGG 3 cut(s) 107, 114, 799
BsmAI GTCTC 2 cut(s) 386, 2100
BsmI GAATGC 2 cut(s) 216, 308
BsnI GGCC 7 cut(s) 299, 357, 364, 531, 849, 1033, 2099
Bso31I GGTCTC 2 cut(s) 386, 2100
BsoBI CYCGRG 1 cut(s) 1670
Bsp120I GGGCCC 1 cut(s) 529
Bsp1286I GDGCHC 5 cut(s) 533, 628, 1633, 1709, 2257
Bsp1407I TGTACA 3 cut(s) 284, 548, 2006
Bsp143I GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
Bsp19I CCATGG 1 cut(s) 964
BspACI CCGC 3 cut(s) 303, 413, 1127
BspANI GGCC 7 cut(s) 299, 357, 364, 531, 849, 1033, 2099
BspCNI CTCAG 4 cut(s) 730, 867, 1378, 1540
BspDI ATCGAT 1 cut(s) 1776
BspLI GGNNCC 2 cut(s) 531, 850
BspMAI CTGCAG 2 cut(s) 454, 1480
BspMI ACCTGC 1 cut(s) 205
BspPI GGATC 2 cut(s) 1160, 1333
BspQI GCTCTTC 2 cut(s) 120, 1065
BspTNI GGTCTC 2 cut(s) 386, 2100
BsrBI CCGCTC 1 cut(s) 415
BsrFI RCCGGY 2 cut(s) 113, 798
BsrGI TGTACA 3 cut(s) 284, 548, 2006
BsrI ACTGG 1 cut(s) 1658
BssAI RCCGGY 2 cut(s) 113, 798
BssECI CCNNGG 5 cut(s) 402, 672, 964, 1753, 1754
BssMI GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
BssT1I CCWWGG 2 cut(s) 402, 964
Bst2UI CCWGG 6 cut(s) 179, 185, 673, 1262, 1615, 1755
Bst4CI ACNGT 6 cut(s) 50, 284, 488, 1006, 1409, 2043
Bst6I CTCTTC 3 cut(s) 120, 1023, 1065
BstAPI GCANNNNNTGC 1 cut(s) 1271
BstAUI TGTACA 3 cut(s) 284, 548, 2006
BstC8I GCNNGC 9 cut(s) 132, 190, 366, 572, 628, 1031, 1149, 1153, 1299
BstDEI CTNAG 8 cut(s) 11, 434, 473, 738, 875, 1365, 1396, 1548
BstDSI CCRYGG 1 cut(s) 964
BstENI CCTNNNNNAGG 1 cut(s) 2031
BstF5I GGATG 8 cut(s) 277, 508, 668, 725, 772, 1127, 1276, 1460
BstH2I RGCGCY 1 cut(s) 1555
BstHHI GCGC 1 cut(s) 1554
BstKTI GATC 5 cut(s) 646, 1168, 1328, 1450, 2019
BstMAI GTCTC 2 cut(s) 386, 2100
BstMBI GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
BstMWI GCNNNNNNNGC 7 cut(s) 127, 305, 374, 820, 927, 1271, 1298
BstNI CCWGG 6 cut(s) 179, 185, 673, 1262, 1615, 1755
BstNSI RCATGY 3 cut(s) 377, 574, 1803
BstSCI CCNGG 7 cut(s) 105, 177, 183, 671, 1260, 1613, 1753
BstSFI CTRYAG 2 cut(s) 450, 1476
BstSLI GKGCMC 2 cut(s) 533, 1709
BstV1I GCAGC 9 cut(s) 97, 292, 332, 1630, 1808, 1888, 2116, 2182, 2237
BstX2I RGATCY 3 cut(s) 1165, 1325, 2016
BstYI RGATCY 3 cut(s) 1165, 1325, 2016
Bsu15I ATCGAT 1 cut(s) 1776
BsuI GTATCC 1 cut(s) 985
BsuRI GGCC 7 cut(s) 299, 357, 364, 531, 849, 1033, 2099
BsuTUI ATCGAT 1 cut(s) 1776
BtgI CCRYGG 1 cut(s) 964
BtrI CACGTC 1 cut(s) 2296
BtsCI GGATG 8 cut(s) 277, 508, 668, 725, 772, 1127, 1276, 1460
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 2 cut(s) 199, 1311
BveI ACCTGC 1 cut(s) 205
Cac8I GCNNGC 9 cut(s) 132, 190, 366, 572, 628, 1031, 1149, 1153, 1299
CaiI CAGNNNCTG 1 cut(s) 2185
CfoI GCGC 1 cut(s) 1554
Cfr10I RCCGGY 2 cut(s) 113, 798
Cfr13I GGNCC 6 cut(s) 181, 529, 530, 590, 848, 1032
ClaI ATCGAT 1 cut(s) 1776
CseI GACGC 1 cut(s) 563
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 8 cut(s) 117, 285, 549, 787, 926, 1331, 1473, 2007
CspCI CAANNNNNGTGG 4 cut(s) 487, 522, 1623, 1658
CviQI GTAC 8 cut(s) 117, 285, 549, 787, 926, 1331, 1473, 2007
DdeI CTNAG 8 cut(s) 11, 434, 473, 738, 875, 1365, 1396, 1548
DpnI GATC 5 cut(s) 645, 1167, 1327, 1449, 2018
DpnII GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
EaeI YGGCCR 1 cut(s) 355
Eam1104I CTCTTC 3 cut(s) 120, 1023, 1065
EarI CTCTTC 3 cut(s) 120, 1023, 1065
Ecl136II GAGCTC 1 cut(s) 1631
Eco130I CCWWGG 2 cut(s) 402, 964
Eco24I GRGCYC 3 cut(s) 533, 1633, 2257
Eco31I GGTCTC 2 cut(s) 386, 2100
Eco47I GGWCC 2 cut(s) 181, 590
Eco47III AGCGCT 1 cut(s) 1553
Eco53kI GAGCTC 1 cut(s) 1631
Eco57I CTGAAG 2 cut(s) 144, 1319
Eco88I CYCGRG 1 cut(s) 1670
EcoICRI GAGCTC 1 cut(s) 1631
EcoNI CCTNNNNNAGG 1 cut(s) 2031
EcoO109I RGGNCCY 3 cut(s) 529, 530, 590
EcoRI GAATTC 1 cut(s) 1349
EcoRII CCWGG 6 cut(s) 177, 183, 671, 1260, 1613, 1753
EcoT14I CCWWGG 2 cut(s) 402, 964
EcoT38I GRGCYC 3 cut(s) 533, 1633, 2257
ErhI CCWWGG 2 cut(s) 402, 964
FalI AAGNNNNNCTT 2 cut(s) 1281, 1313
FauNDI CATATG 2 cut(s) 289, 1217
FbaI TGATCA 1 cut(s) 643
FblI GTMKAC 1 cut(s) 577
Fnu4HI GCNGC 9 cut(s) 111, 306, 321, 1619, 1797, 1902, 2130, 2196, 2226
FokI GGATG 8 cut(s) 284, 515, 655, 732, 759, 1134, 1283, 1467
FriOI GRGCYC 3 cut(s) 533, 1633, 2257
Fsp4HI GCNGC 9 cut(s) 111, 306, 321, 1619, 1797, 1902, 2130, 2196, 2226
FspBI CTAG 3 cut(s) 534, 1275, 1889
GlaI GCGC 1 cut(s) 1553
GluI GCNGC 9 cut(s) 111, 306, 321, 1619, 1797, 1902, 2130, 2196, 2226
HaeII RGCGCY 1 cut(s) 1555
HaeIII GGCC 7 cut(s) 299, 357, 364, 531, 849, 1033, 2099
HapII CCGG 3 cut(s) 107, 114, 799
HgaI GACGC 1 cut(s) 563
HhaI GCGC 1 cut(s) 1554
Hin6I GCGC 1 cut(s) 1552
HinP1I GCGC 1 cut(s) 1552
HincII GTYRAC 1 cut(s) 804
HindII GTYRAC 1 cut(s) 804
HindIII AAGCTT 3 cut(s) 8, 1290, 2135
HinfI GANTC 6 cut(s) 250, 637, 730, 1524, 1544, 1854
HpaII CCGG 3 cut(s) 107, 114, 799
HphI GGTGA 6 cut(s) 167, 287, 339, 847, 1400, 1544
Hpy166II GTNNAC 6 cut(s) 551, 578, 804, 1535, 1707, 2093
Hpy188I TCNGA 9 cut(s) 495, 558, 999, 1170, 1338, 1441, 1468, 1549, 2261
Hpy188III TCNNGA 6 cut(s) 641, 1064, 1670, 1672, 1741, 2030
Hpy8I GTNNAC 6 cut(s) 551, 578, 804, 1535, 1707, 2093
HpyCH4III ACNGT 6 cut(s) 50, 284, 488, 1006, 1409, 2043
HpyCH4IV ACGT 1 cut(s) 2295
HpyF10VI GCNNNNNNNGC 7 cut(s) 127, 305, 374, 820, 927, 1271, 1298
HpyF3I CTNAG 8 cut(s) 11, 434, 473, 738, 875, 1365, 1396, 1548
HpySE526I ACGT 1 cut(s) 2295
HspAI GCGC 1 cut(s) 1552
Ksp22I TGATCA 1 cut(s) 643
Kzo9I GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
LguI GCTCTTC 2 cut(s) 120, 1065
LmnI GCTCC 2 cut(s) 1628, 1636
Lsp1109I GCAGC 9 cut(s) 97, 292, 332, 1630, 1808, 1888, 2116, 2182, 2237
LweI GCATC 8 cut(s) 439, 710, 832, 1134, 1201, 1261, 1503, 1552
MabI ACCWGGT 1 cut(s) 177
MaeI CTAG 3 cut(s) 534, 1275, 1889
MaeII ACGT 1 cut(s) 2295
MaeIII GTNAC 7 cut(s) 173, 194, 972, 1388, 1409, 1802, 2214
MalI GATC 5 cut(s) 645, 1167, 1327, 1449, 2018
MbiI CCGCTC 1 cut(s) 415
MboI GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
MfeI CAATTG 3 cut(s) 1116, 1539, 2153
MflI RGATCY 3 cut(s) 1165, 1325, 2016
MhlI GDGCHC 5 cut(s) 533, 628, 1633, 1709, 2257
MlyI GAGTC 1 cut(s) 1538
MmeI TCCRAC 1 cut(s) 1623
MroXI GAANNNNTTC 4 cut(s) 147, 236, 1080, 2240
MseI TTAA 4 cut(s) 1139, 1185, 2081, 2145
MslI CAYNNNNRTG 5 cut(s) 569, 631, 651, 936, 1776
MspA1I CMGCKG 1 cut(s) 305
MspI CCGG 3 cut(s) 107, 114, 799
MspR9I CCNGG 7 cut(s) 107, 179, 185, 673, 1262, 1615, 1755
MunI CAATTG 3 cut(s) 1116, 1539, 2153
Mva1269I GAATGC 2 cut(s) 216, 308
MvaI CCWGG 6 cut(s) 179, 185, 673, 1262, 1615, 1755
MwoI GCNNNNNNNGC 7 cut(s) 127, 305, 374, 820, 927, 1271, 1298
NciI CCSGG 1 cut(s) 107
NcoI CCATGG 1 cut(s) 964
NdeI CATATG 2 cut(s) 289, 1217
NdeII GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
NlaIV GGNNCC 2 cut(s) 531, 850
NmeAIII GCCGAG 1 cut(s) 2125
NmuCI GTSAC 4 cut(s) 173, 194, 1388, 1409
NspI RCATGY 3 cut(s) 377, 574, 1803
OliI CACNNNNGTG 1 cut(s) 631
PaeI GCATGC 1 cut(s) 574
PaeR7I CTCGAG 1 cut(s) 1670
PaqCI CACCTGC 1 cut(s) 205
PasI CCCWGGG 1 cut(s) 1754
PciSI GCTCTTC 2 cut(s) 120, 1065
PcsI WCGNNNNNNNCGW 1 cut(s) 1677
PctI GAATGC 2 cut(s) 216, 308
PdmI GAANNNNTTC 4 cut(s) 147, 236, 1080, 2240
PfeI GAWTC 5 cut(s) 250, 637, 730, 1524, 1854
PflFI GACNNNGTC 1 cut(s) 1435
PflMI CCANNNNNTGG 1 cut(s) 1601
PkrI GCNGC 9 cut(s) 112, 307, 322, 1620, 1798, 1903, 2131, 2197, 2227
PleI GAGTC 1 cut(s) 1538
PpsI GAGTC 1 cut(s) 1538
PpuMI RGGWCCY 1 cut(s) 590
PshBI ATTAAT 2 cut(s) 1139, 2081
PsiI TTATAA 1 cut(s) 462
Psp124BI GAGCTC 1 cut(s) 1633
Psp5II RGGWCCY 1 cut(s) 590
Psp6I CCWGG 6 cut(s) 177, 183, 671, 1260, 1613, 1753
PspGI CCWGG 6 cut(s) 177, 183, 671, 1260, 1613, 1753
PspN4I GGNNCC 2 cut(s) 531, 850
PspOMI GGGCCC 1 cut(s) 529
PspPI GGNCC 6 cut(s) 181, 529, 530, 590, 848, 1032
PspPPI RGGWCCY 1 cut(s) 590
PstI CTGCAG 2 cut(s) 454, 1480
PstNI CAGNNNCTG 1 cut(s) 2185
PsuI RGATCY 3 cut(s) 1165, 1325, 2016
PsyI GACNNNGTC 1 cut(s) 1435
RsaI GTAC 8 cut(s) 118, 286, 550, 788, 927, 1332, 1474, 2008
RsaNI GTAC 8 cut(s) 117, 285, 549, 787, 926, 1331, 1473, 2007
RseI CAYNNNNRTG 5 cut(s) 569, 631, 651, 936, 1776
SacI GAGCTC 1 cut(s) 1633
SapI GCTCTTC 2 cut(s) 120, 1065
SaqAI TTAA 4 cut(s) 1139, 1185, 2081, 2145
SatI GCNGC 9 cut(s) 111, 306, 321, 1619, 1797, 1902, 2130, 2196, 2226
Sau3AI GATC 5 cut(s) 643, 1165, 1325, 1447, 2016
Sau96I GGNCC 6 cut(s) 181, 529, 530, 590, 848, 1032
SchI GAGTC 1 cut(s) 1538
ScrFI CCNGG 7 cut(s) 107, 179, 185, 673, 1262, 1615, 1755
SduI GDGCHC 5 cut(s) 533, 628, 1633, 1709, 2257
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 8 cut(s) 439, 710, 832, 1134, 1201, 1261, 1503, 1552
SfcI CTRYAG 2 cut(s) 450, 1476
Sfr274I CTCGAG 1 cut(s) 1670
SinI GGWCC 2 cut(s) 181, 590
SlaI CTCGAG 1 cut(s) 1670
SmiMI CAYNNNNRTG 5 cut(s) 569, 631, 651, 936, 1776
SmlI CTYRAG 1 cut(s) 1670
SmoI CTYRAG 1 cut(s) 1670
SphI GCATGC 1 cut(s) 574
SsiI CCGC 3 cut(s) 303, 413, 1127
SspMI CTAG 3 cut(s) 534, 1275, 1889
SstI GAGCTC 1 cut(s) 1633
StyD4I CCNGG 7 cut(s) 105, 177, 183, 671, 1260, 1613, 1753
StyI CCWWGG 2 cut(s) 402, 964
TaaI ACNGT 6 cut(s) 50, 284, 488, 1006, 1409, 2043
TaiI ACGT 1 cut(s) 2298
TaqI TCGA 5 cut(s) 141, 151, 1105, 1671, 1776
TaqII GACCGA 1 cut(s) 1458
TatI WGTACW 6 cut(s) 284, 548, 786, 1330, 1472, 2006
TfiI GAWTC 5 cut(s) 250, 637, 730, 1524, 1854
Tru1I TTAA 4 cut(s) 1139, 1185, 2081, 2145
Tru9I TTAA 4 cut(s) 1139, 1185, 2081, 2145
TscAI CASTG 2 cut(s) 199, 1318
TseFI GTSAC 4 cut(s) 173, 194, 1388, 1409
TseI GCWGC 9 cut(s) 110, 305, 320, 1618, 1796, 1901, 2129, 2195, 2225
Tsp45I GTSAC 4 cut(s) 173, 194, 1388, 1409
TspRI CASTG 2 cut(s) 199, 1318
Tth111I GACNNNGTC 1 cut(s) 1435
Van91I CCANNNNNTGG 1 cut(s) 1601
VneI GTGCAC 1 cut(s) 1705
VpaK11BI GGWCC 2 cut(s) 181, 590
VspI ATTAAT 2 cut(s) 1139, 2081
XagI CCTNNNNNAGG 1 cut(s) 2031
XapI RAATTY 7 cut(s) 157, 885, 909, 1349, 1664, 1949, 2047
XceI RCATGY 3 cut(s) 377, 574, 1803
XhoI CTCGAG 1 cut(s) 1670
XmiI GTMKAC 1 cut(s) 577
XmnI GAANNNNTTC 4 cut(s) 147, 236, 1080, 2240
XspI CTAG 3 cut(s) 534, 1275, 1889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.