pycom17g15190

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000173
Physical Location & Seq
Forward (+)
13055629 .. 13060066
4438 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1809 bp
ATGTGGAAGCTTAAGGTCGCAGATGGTGGCAATGATCCATGCATCTACAGCACAAACAACTTCGTGGGTAGGCAGATATTTGAGTTTGACCCTGAAGCAGGAACTACCGAAGAGCGAGCTGAGGTGGAAGAAGCTCGTCTTCATTTCTACAATAATCGCTATCAGGTTAAGCCCAATAGTGACCTCCTTTGGCGAATGCAGTTCCTAAGGGAGAAGAACTTCAAACAGACAATTCCCCCAGTGAAAGTTGAGGATGGAGAGGAAATCACATACGAAAAGGCCATCGCTGCATTGAGAAGGTCTGTCCACTTCTTTTCAGCTTTGCAGGCTAGTGATGGCCATTGGCCGGCTGAAAATGCGGGCCCGTTGTTTTTCCTTCCTCCTTTGGTCATGTGCACTTACATTACGGGACATCTTAATACTGTATTCCTTGCAGAACACCGCAAAGAAATTTTGCGTTACATATACTATCATCAGAACCAAGATGGTGGCTGGGGATTACACATCGAAGGACATAGCACCATGTTCTGCACAGCTCTCAACTACATTTGTATGCGTATTCTTGGAGAAGGCCCTGATGGTGGCCAAGACAATGCTTGTGCAAGAGCTAGAAAGTGGATTCATGATCATGGCAGTGTTACCCACATCCCCTCTTGGGGTAAAACTTGGCTTTCGATACTTGGTGTGTTTGAGTGGTCCGGAAGCAACCCAATGCCCCCAGAGTTTTGGATTCTGCCTTCATTTCTTCCTATGCATCCAGCAAAAATGTTTTGCTACAGTAGGATGGTTTACATGCCTATGTCATATTTATATGGGAAAAGATTTGTTGGTCCAATCACACCTCTCATACTACAATTAAGGGAAGAACTCTATGCTCAACCATATGATGAAATTAATTGGAAGGGAGTGCGTCATCACTGCGCTAAAGTGGACATCTACTACCCTCATCCTTGGATACAGGACCTTTTATGGGATAGTCTGTACGTATGTACGGAGCCTTTTCTTACTCGCTGGCCATTTAACAAGCTGATCAGGAAAAGGGCTCTTGAAGTAACAATGGAGCATGTTCATTATGAAGATGAAAACAGCAGATACATTACCATTGGATGTGTGGAAAAGGTGTTATGCATGCTGGCTTGTTGGGTGGAAGATCCAAATGGGGATTATTTTAAAAAGCATCTTGCCAGGATACCGGATTATTTATGGGTTGCTGAGGATGGGATGAAGATGCAAAGTTTTGGCAGTCAACAGTGGGATACTGGTTTTGCCATTCAAGCTTTGCTTGCTTCCAATCTAACCGATGAAATTGCACCCACGCTCGCTAGAGGACATGACTTCATCAAGAAATCTCAGGTCAAGGACAATCCGTCGGGTGACTTCAAAAGCATGTACCGCCACATTTCCAAAGGATCGTGGACTTTCTCTGATCAAGACCATGGATGGCAAGTTTCTGATTGCACTGCAGAGGGTTTAAAGTGTTGCCTGCTTTTATCGATGATGCCACCCGAGATAGTTGGTGAAAAAATGGAGCCGGAGCGGTTATACGATGCTGTCAATGTCCTAATTTCCCTACAGAGTAAGAATGGTGGCTTACCAGCCTGGGAACCAGCAGGAGCAGCAGAATGGTTAGAAATGTTCAATCCTACAAAATTCTTCGCGGACATTGTGGTTGAGCATGAATACGTTGAGTGCACTTCATCTGCAATCCAGGCTTTAGTTTTGTTTAAGAAGTTATACCCTGGCCACAGGAAGGAAGAGCCGACATCGAAGGATCGATCAATTTATTACTGCTGCTGCACTGTACCTTGA

Protein Analysis

603

Amino Acids

69.53

Weight (kDa)

5.92

Isoelectric Point (pI)

50.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 99 - 359 2e-35 Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C PF13243 417 - 544 7.8e-09 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1537
AccII CGCG 1 cut(s) 1658
AccIII TCCGGA 1 cut(s) 698
AciI CCGC 5 cut(s) 359, 442, 1393, 1537, 1658
AclWI GGATC 4 cut(s) 29, 1145, 1417, 1779
AcoI YGGCCR 5 cut(s) 337, 344, 583, 1013, 1741
AcsI RAATTY 2 cut(s) 450, 1649
AcuI CTGAAG 1 cut(s) 114
AfaI GTAC 4 cut(s) 983, 991, 1391, 1803
AfiI CCNNNNNNNGG 7 cut(s) 98, 346, 581, 655, 656, 970, 1750
AflII CTTAAG 1 cut(s) 11
AgsI TTSAA 5 cut(s) 223, 1049, 1274, 1381, 1639
AhdI GACNNNNNGTC 1 cut(s) 1366
AjnI CCWGG 4 cut(s) 1184, 1598, 1707, 1738
AluBI AGCT 8 cut(s) 10, 119, 134, 320, 536, 608, 1027, 1277
AluI AGCT 8 cut(s) 10, 119, 134, 320, 536, 608, 1027, 1277
Alw21I GWGCWC 2 cut(s) 398, 1694
Alw44I GTGCAC 2 cut(s) 394, 1690
AlwI GGATC 4 cut(s) 29, 1145, 1417, 1779
Ama87I CYCGRG 1 cut(s) 1505
Aor13HI TCCGGA 1 cut(s) 698
AoxI GGCC 8 cut(s) 279, 337, 344, 361, 571, 583, 1013, 1741
ApaI GGGCCC 1 cut(s) 365
ApaLI GTGCAC 2 cut(s) 394, 1690
ApeKI GCWGC 4 cut(s) 287, 1616, 1791, 1794
ApoI RAATTY 2 cut(s) 450, 1649
AseI ATTAAT 1 cut(s) 894
Asp700I GAANNNNTTC 1 cut(s) 218
AspLEI GCGC 1 cut(s) 923
AspS9I GGNCC 6 cut(s) 361, 362, 572, 696, 830, 961
AsuHPI GGTGA 2 cut(s) 1385, 1529
AvaI CYCGRG 1 cut(s) 1505
AvaII GGWCC 3 cut(s) 696, 830, 961
AxyI CCTNAGG 1 cut(s) 206
BaeGI GKGCMC 3 cut(s) 365, 398, 1694
BalI TGGCCA 4 cut(s) 339, 585, 1015, 1743
BanII GRGCYC 2 cut(s) 365, 1045
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 2 cut(s) 398, 1694
BbvCI CCTCAGC 2 cut(s) 120, 1212
BbvI GCAGC 4 cut(s) 274, 1628, 1778, 1781
BccI CCATC 9 cut(s) 17, 248, 290, 329, 479, 572, 778, 1211, 1434
BcgI CGANNNNNNTGC 2 cut(s) 1289, 1323
BciT130I CCWGG 4 cut(s) 1186, 1600, 1709, 1740
BciVI GTATCC 3 cut(s) 948, 1182, 1249
BclI TGATCA 3 cut(s) 625, 1029, 1426
BfaI CTAG 3 cut(s) 330, 609, 1323
BfmI CTRYAG 4 cut(s) 46, 775, 1461, 1571
BfrI CTTAAG 1 cut(s) 11
BfuI GTATCC 3 cut(s) 948, 1182, 1249
BisI GCNGC 4 cut(s) 288, 1617, 1792, 1795
BlsI GCNGC 4 cut(s) 289, 1618, 1793, 1796
Bme1390I CCNGG 4 cut(s) 1186, 1600, 1709, 1740
Bme18I GGWCC 3 cut(s) 696, 830, 961
BmeRI GACNNNNNGTC 1 cut(s) 1366
BmeT110I CYCGRG 1 cut(s) 1505
BmgT120I GGNCC 6 cut(s) 361, 362, 572, 696, 830, 961
BmiI GGNNCC 4 cut(s) 363, 996, 1530, 1605
BmrFI CCNGG 4 cut(s) 1186, 1600, 1709, 1740
BmrI ACTGGG 1 cut(s) 233
BmsI GCATC 6 cut(s) 51, 763, 1186, 1218, 1488, 1537
BmuI ACTGGG 1 cut(s) 233
BpiI GAAGAC 1 cut(s) 131
Bpu10I CCTNAGC 2 cut(s) 120, 1212
Bsa29I ATCGAT 2 cut(s) 1493, 1774
BsaAI YACGTR 1 cut(s) 985
BsaJI CCNNGG 4 cut(s) 950, 1435, 1599, 1738
BsaWI WCCGGW 2 cut(s) 698, 1192
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 346, 581, 655, 656, 970, 1750
Bse118I RCCGGY 1 cut(s) 346
Bse1I ACTGG 2 cut(s) 239, 1264
Bse21I CCTNAGG 1 cut(s) 206
Bse3DI GCAATG 1 cut(s) 37
BseAI TCCGGA 1 cut(s) 698
BseBI CCWGG 4 cut(s) 1186, 1600, 1709, 1740
BseCI ATCGAT 2 cut(s) 1493, 1774
BseDI CCNNGG 4 cut(s) 950, 1435, 1599, 1738
BseGI GGATG 9 cut(s) 259, 645, 754, 789, 946, 1112, 1222, 1227, 1445
BseLI CCNNNNNNNGG 7 cut(s) 98, 346, 581, 655, 656, 970, 1750
BseMI GCAATG 1 cut(s) 37
BseMII CTCAG 3 cut(s) 111, 1203, 1364
BseNI ACTGG 2 cut(s) 239, 1264
BseSI GKGCMC 3 cut(s) 365, 398, 1694
BseXI GCAGC 4 cut(s) 274, 1628, 1778, 1781
BseYI CCCAGC 1 cut(s) 492
BsgI GTGCAG 2 cut(s) 514, 1780
Bsh1236I CGCG 1 cut(s) 1658
BshFI GGCC 8 cut(s) 281, 339, 346, 363, 573, 585, 1015, 1743
BshVI ATCGAT 2 cut(s) 1493, 1774
BsiHKAI GWGCWC 2 cut(s) 398, 1694
BsiHKCI CYCGRG 1 cut(s) 1505
BsiSI CCGG 4 cut(s) 347, 699, 1193, 1532
BslFI GGGAC 1 cut(s) 423
BslI CCNNNNNNNGG 7 cut(s) 98, 346, 581, 655, 656, 970, 1750
BsmFI GGGAC 1 cut(s) 423
BsmI GAATGC 1 cut(s) 201
BsnI GGCC 8 cut(s) 281, 339, 346, 363, 573, 585, 1015, 1743
BsoBI CYCGRG 1 cut(s) 1505
Bsp120I GGGCCC 1 cut(s) 361
Bsp1286I GDGCHC 4 cut(s) 365, 398, 1045, 1694
Bsp13I TCCGGA 1 cut(s) 698
Bsp143I GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
Bsp19I CCATGG 1 cut(s) 1435
BspACI CCGC 5 cut(s) 359, 442, 1393, 1537, 1658
BspANI GGCC 8 cut(s) 281, 339, 346, 363, 573, 585, 1015, 1743
BspCNI CTCAG 3 cut(s) 112, 1204, 1363
BspDI ATCGAT 2 cut(s) 1493, 1774
BspEI TCCGGA 1 cut(s) 698
BspFNI CGCG 1 cut(s) 1658
BspHI TCATGA 1 cut(s) 622
BspLI GGNNCC 4 cut(s) 363, 996, 1530, 1605
BspMAI CTGCAG 1 cut(s) 1465
BspPI GGATC 4 cut(s) 29, 1145, 1417, 1779
BspQI GCTCTTC 2 cut(s) 105, 1749
BspTI CTTAAG 1 cut(s) 11
BsrBI CCGCTC 1 cut(s) 1537
BsrDI GCAATG 1 cut(s) 37
BsrFI RCCGGY 1 cut(s) 346
BsrI ACTGG 2 cut(s) 239, 1264
BssAI RCCGGY 1 cut(s) 346
BssECI CCNNGG 4 cut(s) 950, 1435, 1599, 1738
BssMI GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
BssT1I CCWWGG 2 cut(s) 950, 1435
Bst2UI CCWGG 4 cut(s) 1186, 1600, 1709, 1740
Bst4CI ACNGT 4 cut(s) 424, 779, 1251, 1801
Bst6I CTCTTC 2 cut(s) 105, 1749
BstAFI CTTAAG 1 cut(s) 11
BstBAI YACGTR 1 cut(s) 985
BstDEI CTNAG 4 cut(s) 120, 206, 1212, 1350
BstDSI CCRYGG 1 cut(s) 1435
BstENI CCTNNNNNAGG 1 cut(s) 96
BstF5I GGATG 9 cut(s) 259, 645, 754, 789, 946, 1112, 1222, 1227, 1445
BstFNI CGCG 1 cut(s) 1658
BstHHI GCGC 1 cut(s) 923
BstKTI GATC 8 cut(s) 37, 628, 1032, 1153, 1412, 1429, 1774, 1778
BstMBI GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
BstMWI GCNNNNNNNGC 9 cut(s) 48, 287, 326, 356, 1274, 1283, 1392, 1616, 1709
BstNI CCWGG 4 cut(s) 1186, 1600, 1709, 1740
BstNSI RCATGY 4 cut(s) 796, 1067, 1132, 1390
BstSCI CCNGG 4 cut(s) 1184, 1598, 1707, 1738
BstSFI CTRYAG 4 cut(s) 46, 775, 1461, 1571
BstSLI GKGCMC 3 cut(s) 365, 398, 1694
BstSNI TACGTA 1 cut(s) 985
BstUI CGCG 1 cut(s) 1658
BstV1I GCAGC 4 cut(s) 274, 1628, 1778, 1781
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 1 cut(s) 1150
BstXI CCANNNNNNTGG 2 cut(s) 488, 726
BstYI RGATCY 1 cut(s) 1150
Bsu15I ATCGAT 2 cut(s) 1493, 1774
Bsu36I CCTNAGG 1 cut(s) 206
BsuI GTATCC 3 cut(s) 948, 1182, 1249
BsuRI GGCC 8 cut(s) 281, 339, 346, 363, 573, 585, 1015, 1743
BsuTUI ATCGAT 2 cut(s) 1493, 1774
BtgI CCRYGG 1 cut(s) 1435
BtgZI GCGATG 1 cut(s) 268
BtsCI GGATG 9 cut(s) 259, 645, 754, 789, 946, 1112, 1222, 1227, 1445
BtsI GCAGTG 3 cut(s) 640, 916, 1458
BtsIMutI CAGTG 6 cut(s) 246, 640, 916, 1256, 1458, 1797
CciI TCATGA 1 cut(s) 622
CfoI GCGC 1 cut(s) 923
Cfr10I RCCGGY 1 cut(s) 346
Cfr13I GGNCC 6 cut(s) 361, 362, 572, 696, 830, 961
ClaI ATCGAT 2 cut(s) 1493, 1774
CseI GACGC 1 cut(s) 899
Csp6I GTAC 4 cut(s) 982, 990, 1390, 1802
CviQI GTAC 4 cut(s) 982, 990, 1390, 1802
DdeI CTNAG 4 cut(s) 120, 206, 1212, 1350
DpnI GATC 8 cut(s) 36, 627, 1031, 1152, 1411, 1428, 1773, 1777
DpnII GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
DraI TTTAAA 2 cut(s) 1171, 1473
DriI GACNNNNNGTC 1 cut(s) 1366
EaeI YGGCCR 5 cut(s) 337, 344, 583, 1013, 1741
Eam1104I CTCTTC 2 cut(s) 105, 1749
Eam1105I GACNNNNNGTC 1 cut(s) 1366
EarI CTCTTC 2 cut(s) 105, 1749
Eco105I TACGTA 1 cut(s) 985
Eco130I CCWWGG 2 cut(s) 950, 1435
Eco24I GRGCYC 2 cut(s) 365, 1045
Eco47I GGWCC 3 cut(s) 696, 830, 961
Eco57I CTGAAG 1 cut(s) 114
Eco81I CCTNAGG 1 cut(s) 206
Eco88I CYCGRG 1 cut(s) 1505
EcoNI CCTNNNNNAGG 1 cut(s) 96
EcoO109I RGGNCCY 2 cut(s) 572, 961
EcoRII CCWGG 4 cut(s) 1184, 1598, 1707, 1738
EcoT14I CCWWGG 2 cut(s) 950, 1435
EcoT22I ATGCAT 3 cut(s) 44, 756, 1130
EcoT38I GRGCYC 2 cut(s) 365, 1045
ErhI CCWWGG 2 cut(s) 950, 1435
FalI AAGNNNNNCTT 4 cut(s) 123, 155, 1266, 1298
FaqI GGGAC 1 cut(s) 423
FauI CCCGC 1 cut(s) 352
FauNDI CATATG 1 cut(s) 883
FbaI TGATCA 3 cut(s) 625, 1029, 1426
Fnu4HI GCNGC 4 cut(s) 288, 1617, 1792, 1795
FokI GGATG 9 cut(s) 266, 632, 741, 796, 933, 1119, 1229, 1234, 1452
FriOI GRGCYC 2 cut(s) 365, 1045
Fsp4HI GCNGC 4 cut(s) 288, 1617, 1792, 1795
FspBI CTAG 3 cut(s) 330, 609, 1323
GlaI GCGC 1 cut(s) 922
GluI GCNGC 4 cut(s) 288, 1617, 1792, 1795
GsaI CCCAGC 1 cut(s) 496
HaeIII GGCC 8 cut(s) 281, 339, 346, 363, 573, 585, 1015, 1743
HapII CCGG 4 cut(s) 347, 699, 1193, 1532
HgaI GACGC 1 cut(s) 899
HhaI GCGC 1 cut(s) 923
Hin6I GCGC 1 cut(s) 921
HinP1I GCGC 1 cut(s) 921
HincII GTYRAC 1 cut(s) 1247
HindII GTYRAC 1 cut(s) 1247
HindIII AAGCTT 2 cut(s) 8, 1275
HinfI GANTC 2 cut(s) 619, 730
HpaII CCGG 4 cut(s) 347, 699, 1193, 1532
HphI GGTGA 2 cut(s) 1385, 1529
Hpy166II GTNNAC 7 cut(s) 307, 396, 790, 931, 1247, 1416, 1692
Hpy188I TCNGA 3 cut(s) 477, 1426, 1453
Hpy188III TCNNGA 6 cut(s) 623, 699, 1033, 1046, 1342, 1430
Hpy8I GTNNAC 7 cut(s) 307, 396, 790, 931, 1247, 1416, 1692
Hpy99I CGWCG 1 cut(s) 1372
HpyAV CCTTC 8 cut(s) 291, 386, 503, 563, 747, 895, 1744, 1762
HpyCH4III ACNGT 4 cut(s) 424, 779, 1251, 1801
HpyCH4IV ACGT 2 cut(s) 984, 1683
HpyF10VI GCNNNNNNNGC 9 cut(s) 48, 287, 326, 356, 1274, 1283, 1392, 1616, 1709
HpyF3I CTNAG 4 cut(s) 120, 206, 1212, 1350
HpySE526I ACGT 2 cut(s) 984, 1683
HspAI GCGC 1 cut(s) 921
Kpn2I TCCGGA 1 cut(s) 698
KroI GCCGGC 1 cut(s) 346
KroNI GCCGGC 1 cut(s) 348
Ksp22I TGATCA 3 cut(s) 625, 1029, 1426
Kzo9I GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
LguI GCTCTTC 2 cut(s) 105, 1749
LmnI GCTCC 5 cut(s) 994, 1060, 1528, 1534, 1613
Lsp1109I GCAGC 4 cut(s) 274, 1628, 1778, 1781
LweI GCATC 6 cut(s) 51, 763, 1186, 1218, 1488, 1537
MaeI CTAG 3 cut(s) 330, 609, 1323
MaeII ACGT 2 cut(s) 984, 1683
MaeIII GTNAC 5 cut(s) 179, 458, 637, 1051, 1373
MalI GATC 8 cut(s) 36, 627, 1031, 1152, 1411, 1428, 1773, 1777
MbiI CCGCTC 1 cut(s) 1537
MboI GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
MflI RGATCY 1 cut(s) 1150
MhlI GDGCHC 4 cut(s) 365, 398, 1045, 1694
MlsI TGGCCA 4 cut(s) 339, 585, 1015, 1743
MluCI AATT 9 cut(s) 231, 450, 854, 891, 895, 1305, 1563, 1649, 1779
MluNI TGGCCA 4 cut(s) 339, 585, 1015, 1743
Mox20I TGGCCA 4 cut(s) 339, 585, 1015, 1743
Mph1103I ATGCAT 3 cut(s) 44, 756, 1130
MroI TCCGGA 1 cut(s) 698
MroNI GCCGGC 1 cut(s) 346
MroXI GAANNNNTTC 1 cut(s) 218
MscI TGGCCA 4 cut(s) 339, 585, 1015, 1743
MseI TTAA 9 cut(s) 12, 168, 417, 857, 894, 1020, 1170, 1472, 1725
MslI CAYNNNNRTG 4 cut(s) 551, 627, 633, 797
Msp20I TGGCCA 4 cut(s) 339, 585, 1015, 1743
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 4 cut(s) 347, 699, 1193, 1532
MspR9I CCNGG 4 cut(s) 1186, 1600, 1709, 1740
Mva1269I GAATGC 1 cut(s) 201
MvaI CCWGG 4 cut(s) 1186, 1600, 1709, 1740
MvnI CGCG 1 cut(s) 1658
MwoI GCNNNNNNNGC 9 cut(s) 48, 287, 326, 356, 1274, 1283, 1392, 1616, 1709
NaeI GCCGGC 1 cut(s) 348
NcoI CCATGG 1 cut(s) 1435
NdeI CATATG 1 cut(s) 883
NdeII GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
NgoMIV GCCGGC 1 cut(s) 346
NlaIV GGNNCC 4 cut(s) 363, 996, 1530, 1605
NmuCI GTSAC 2 cut(s) 179, 1373
NsiI ATGCAT 3 cut(s) 44, 756, 1130
NspI RCATGY 4 cut(s) 796, 1067, 1132, 1390
PaeI GCATGC 1 cut(s) 1132
PagI TCATGA 1 cut(s) 622
PciSI GCTCTTC 2 cut(s) 105, 1749
PctI GAATGC 1 cut(s) 201
PdiI GCCGGC 1 cut(s) 348
PdmI GAANNNNTTC 1 cut(s) 218
PfeI GAWTC 2 cut(s) 619, 730
PkrI GCNGC 4 cut(s) 289, 1618, 1793, 1796
Ppu21I YACGTR 1 cut(s) 985
PpuMI RGGWCCY 1 cut(s) 961
PshBI ATTAAT 1 cut(s) 894
Psp5II RGGWCCY 1 cut(s) 961
Psp6I CCWGG 4 cut(s) 1184, 1598, 1707, 1738
PspFI CCCAGC 1 cut(s) 492
PspGI CCWGG 4 cut(s) 1184, 1598, 1707, 1738
PspN4I GGNNCC 4 cut(s) 363, 996, 1530, 1605
PspOMI GGGCCC 1 cut(s) 361
PspPI GGNCC 6 cut(s) 361, 362, 572, 696, 830, 961
PspPPI RGGWCCY 1 cut(s) 961
PstI CTGCAG 1 cut(s) 1465
PsuI RGATCY 1 cut(s) 1150
RsaI GTAC 4 cut(s) 983, 991, 1391, 1803
RsaNI GTAC 4 cut(s) 982, 990, 1390, 1802
RseI CAYNNNNRTG 4 cut(s) 551, 627, 633, 797
SapI GCTCTTC 2 cut(s) 105, 1749
SaqAI TTAA 9 cut(s) 12, 168, 417, 857, 894, 1020, 1170, 1472, 1725
SatI GCNGC 4 cut(s) 288, 1617, 1792, 1795
Sau3AI GATC 8 cut(s) 34, 625, 1029, 1150, 1409, 1426, 1771, 1775
Sau96I GGNCC 6 cut(s) 361, 362, 572, 696, 830, 961
ScrFI CCNGG 4 cut(s) 1186, 1600, 1709, 1740
SduI GDGCHC 4 cut(s) 365, 398, 1045, 1694
SfaNI GCATC 6 cut(s) 51, 763, 1186, 1218, 1488, 1537
SfcI CTRYAG 4 cut(s) 46, 775, 1461, 1571
SinI GGWCC 3 cut(s) 696, 830, 961
SmiMI CAYNNNNRTG 4 cut(s) 551, 627, 633, 797
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
SnaBI TACGTA 1 cut(s) 985
SphI GCATGC 1 cut(s) 1132
Sse9I AATT 9 cut(s) 231, 450, 854, 891, 895, 1305, 1563, 1649, 1779
SsiI CCGC 5 cut(s) 359, 442, 1393, 1537, 1658
SspMI CTAG 3 cut(s) 330, 609, 1323
StyD4I CCNGG 4 cut(s) 1184, 1598, 1707, 1738
StyI CCWWGG 2 cut(s) 950, 1435
TaaI ACNGT 4 cut(s) 424, 779, 1251, 1801
TaiI ACGT 2 cut(s) 987, 1686
TaqI TCGA 5 cut(s) 507, 674, 1493, 1766, 1774
TasI AATT 9 cut(s) 231, 450, 854, 891, 895, 1305, 1563, 1649, 1779
TfiI GAWTC 2 cut(s) 619, 730
Tru1I TTAA 9 cut(s) 12, 168, 417, 857, 894, 1020, 1170, 1472, 1725
Tru9I TTAA 9 cut(s) 12, 168, 417, 857, 894, 1020, 1170, 1472, 1725
TscAI CASTG 6 cut(s) 246, 640, 923, 1256, 1465, 1804
TseFI GTSAC 2 cut(s) 179, 1373
TseI GCWGC 4 cut(s) 287, 1616, 1791, 1794
Tsp45I GTSAC 2 cut(s) 179, 1373
TspGWI ACGGA 2 cut(s) 1007, 1356
TspRI CASTG 6 cut(s) 246, 640, 923, 1256, 1465, 1804
Vha464I CTTAAG 1 cut(s) 11
VneI GTGCAC 2 cut(s) 394, 1690
VpaK11BI GGWCC 3 cut(s) 696, 830, 961
VspI ATTAAT 1 cut(s) 894
XagI CCTNNNNNAGG 1 cut(s) 96
XapI RAATTY 2 cut(s) 450, 1649
XceI RCATGY 4 cut(s) 796, 1067, 1132, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XmnI GAANNNNTTC 1 cut(s) 218
XspI CTAG 3 cut(s) 330, 609, 1323
Zsp2I ATGCAT 3 cut(s) 44, 756, 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.