pycom17g15300

Belongs to the terpene cyclase mutase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000173
Physical Location & Seq
Forward (+)
13275746 .. 13280143
4398 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2046 bp
ATGTGGAGGATTAAGTTTGGAGAAGGTGCAAACGACCCCTTGTTGTTCAGCACAAACAACTTCCATGGAAGGCAGACATGGGAGTTCGACCCAGATGCAGGTACCGAGGAGGAGCGAGCAGAAGTTGAAGCTTCTCGTGAGCATTTCTATCAAAACCGCTTCAAGGTCACGCCTAGCAGTGACCTCCTATGGCGTTTTCAGATTTTAAGAGAGAAAAACTTCAAACAAGAAATTCCTCCTGTAAGAATTGGGGAAGGTGAGGAAATTACATATGATCAAGCCACAGCTGCATTCAGGAGGGCTGCTACCTTTTGGAATGCCTTGCAATCACCCCATGGACATTGGCCTGCTGAAAATGCTGGCCCAAACTTTTACTTCCCTCCCTTGGTCATGGCTGCATACATTCCAGGGTATCTCAATGTTATTTTCTCAGCTGAGCACAAGAAGGAAATCTTGCGTTACACATACAACCATCAGAATGAAGATGGTGGGTGGGGACTGCACATATCAGGCCCTAGTATGATGTTTACAACATGCCTTAACTACTGTATGATGCGTATTCTCGGAGAGGGCCCTGATGGTGGGCGTGACAATGCATGCGCAAGGGCACGAAAATGGATTCTTGATCGTGGTGGTGCTTACTATTCTGCATCATGGGGAAAAACTTGGATGGCGATTCTTGGTGTGTATGACTGGGAAGGCAGCAACCCAATGCCCCCGGAATTCTGGACTGGGTCTACACTGCTTCCTTTTCATCCATCAAAAATGTTCTGCTACTGTAGGTTGACTTACCTACCTATGTCTTACTTTTATGCCACAAGATTTGTTGGCCCGATCACTCCTCTGGTTGAGGAATTGAGACAAGAAATTTACTGTGAACCTTACAGCGAAATCAACTGGCCTAAAGTGCGCCATTGGTGTGCATCGGACGATAACTACTATCCCCATGGTCGTGTACAACGTTTTATGTGGGACAGTTTTTACAATATCGTTGAGCCTCTCCTAAAACGCTGGCCTTTCAAGAAGATTAGAGACAATGCCATTCAATTCACAATTGACCAAATTCATTATGAAGATGAGAACAGTCGCTACATTACAATCGGATGTGTGGAAAAGCCATTAATGATGCTTGCTTGCTGGGCCGAGGATCCTAGTGGAGAAGCTTTCAAGAAGCATATTCCTAGAGTTACCGATTATATCTGGCTCGGAGAGGATGGAATCAAGATGCAGAGTTTTGGAAGCCAGTCATGGGATTGTGCTCTTGTGATTCAAGCTTTGTTTGCTGGCAATCTAAATACGGAAATGGCACCTACCCTTAAGAAAGCACACGAATTTCTCAAGATATCTCAGGTGAGGGTGAATACTTCTGGGGACTACCTAGCTCATTTCCGTCACGTTTCTAAGGGCGCGTGGACATTCTCTGACCGAGACCATGGATGGCAAGTGTCGGATTGTACCGCAGAAGCACTGAGGTGTTGCTGCATTTTCGCAAATATGTCCCCAGAACTTGTTGGTGAGCCAATGGAAGCTGACTGTATGTATGATGCTGTCAATGTCATCTTGACTCTTCAGAGTCCAAATGGTGGTGTATCAGCCTGGGAACCAACAGGAGCACCAAAATGGTTGGAGTGGCTCAACCCTGTGGAGTTTCTTGAGGACCTTGTCATTGAGTACGAGTACATCGAATGCACTTCATCTTCGATCCAGGCCTTAACTTTGTTTAGGAAGTTGTACCCTGGCCATAGAAGGAAGGATCGATCAACAATTTCATCACGAAGGCAGCAGACTACATTGAAGACATACAGTACCCTGATGGCTCATGGTATGGAAACTGGGGAATCTGCTTCGTGTATGGTACATGGTTCGCAATCAAAGGGCTGGAGGCCGCTGGTAGGACATACAACAACTGCGAGGCAGTGCGCAAAGGTGTTGACTTTTTGCTCAAAACACAAAGGGCAGATGGTGGCTGGGGAGAGCACTACACCTCATGCACAAACAAGGCTGAGAGAGATCCAACTCCTATTCACCGTGCTGCTGCACTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 ko01110 map00909 map01110
Pfam Domains
Protein Families
SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

682

Amino Acids

78.32

Weight (kDa)

6.3

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SQHop_cyclase_N PF13249 102 - 391 1.1e-30 Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C PF13243 416 - 540 1.2e-07 Squalene-hopene cyclase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66960 AT1G66960 AT1G66960 AT1G66960 AT1G78950 AT1G78950 AT1G78955 AT1G78955 AT1G78955 AT1G78955 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78960 AT1G78970 AT1G78970 AT1G78970
fragaria_vesca FvH4_5g29480 FvH4_6g36450 FvH4_6g36450 FvH4_6g36500 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g36520 FvH4_6g37620
malus_domestica MD03G1089600.v1.1 MD09G1167700.v1.1 MD09G1168200.v1.1 MD09G1168300.v1.1 MD11G1098600.v1.1 MD17G1158300.v1.1 MD17G1158700.v1.1 MD17G1159500.v1.1 MD17G1160500.v1.1 MD17G1182500.v1.1 MD17G1182700.v1.1 MD17G1245800.v1.1 MD17G1246300.v1.1 MD17G1246600.v1.1
prunus_persica Prupe.3G025700_v2.0.a1 Prupe.3G025700_v2.0.a1 Prupe.3G025800_v2.0.a1 Prupe.3G025900_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026200_v2.0.a1 Prupe.3G026400_v2.0.a1 Prupe.3G026500_v2.0.a1 Prupe.3G026700_v2.0.a1 Prupe.3G026800_v2.0.a1
pyrus_communis pycom03g07120 pycom09g08520 pycom09g08590 pycom09g08610 pycom10g10070 pycom11g08310 pycom16g19880 pycom17g15190 pycom17g15300
rosa_chinensis RchiOBHm_Chr2g0136221 RchiOBHm_Chr2g0148451 RchiOBHm_Chr2g0148501 RchiOBHm_Chr2g0148521 RchiOBHm_Chr2g0148661 RchiOBHm_Chr2g0148701 RchiOBHm_Chr2g0148811 RchiOBHm_Chr2g0148941 RchiOBHm_Chr2g0148981 RchiOBHm_Chr2g0150451 RchiOBHm_Chr2g0150521 RchiOBHm_Chr2g0150611 RchiOBHm_Chr4g0420831 RchiOBHm_Chr5g0049791 RchiOBHm_Chr5g0049801
rosa_laevigata RLG00000007735 RLG00000020351 RLG00000020352 RLG00000020357 RLG00000020358 RLG00000020360 RLG00000029093 RLG00000030686
rosa_multiflora Rmu_co8274513.1_g000001 Rmu_sc0000048.1_g000003 Rmu_sc0000048.1_g000033 Rmu_sc0000048.1_g000039 Rmu_sc0001397.1_g000011 Rmu_sc0001998.1_g000039 Rmu_sc0002070.1_g000055 Rmu_sc0002082.1_g000052 Rmu_sc0003181.1_g000010 Rmu_sc0005104.1_g000005 Rmu_sc0006758.1_g000002 Rmu_sc0008411.1_g000029 Rmu_sc0008411.1_g000030 Rmu_sc0017472.1_g000001 Rmu_sc0017472.1_g000003 Rmu_sc0029876.1_g000001 Rmu_ssc0000480.1_g000024 Rmu_ssc0000480.1_g000036
rosa_roxburghii Rroxscaffold_2G00097070 Rroxscaffold_2G00098540 Rroxscaffold_2G00098560 Rroxscaffold_2G00098570 Rroxscaffold_2G00098650 Rroxscaffold_2G00098710 Rroxscaffold_2G00098740 Rroxscaffold_3G00225830 Rroxscaffold_3G00236870 Rroxscaffold_4G00312240
rosa_rugosa Rorug01G0047000 Rorug02G0372300 Rorug02G0407200 Rorug02G0407300 Rorug02G0408400 Rorug02G0421500 Rorug07G0208900
rosa_samantha Rh2AG380200 Rh2AG465700 Rh2AG465800 Rh2AG466800 Rh2AG467100 Rh2AG467600 Rh2AG480900 Rh2AG481400 Rh2AG481700 Rh2CG073500 Rh2CG452200 Rh2CG453200 Rh2CG453600 Rh2CG454100 Rh2CG467100 Rh2CG467800 Rh2CG468000 Rh2DG403100 Rh2DG487800 Rh2DG487900 Rh2DG488800 Rh2DG502000 Rh2DG502200 Rh2DG502300 Rh2DG503100 Rh3AG319300 Rh4AG227700 Rh4BG371800 Rh5AG327400 Rh5DG350600 Rh7AG349800
rosa_wichuraiana Rw0G010080 Rw2G031110 Rw2G037980 Rw2G037990 Rw2G038000 Rw2G038010 Rw2G038080 Rw2G038100 Rw2G039260 Rw2G039290 Rw2G039470 Rw4G019710 Rw5G030930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 601, 1921
Acc36I ACCTGC 1 cut(s) 89
Acc65I GGTACC 1 cut(s) 101
AccB1I GGYRCC 2 cut(s) 101, 1306
AccB7I CCANNNNNTGG 1 cut(s) 1583
AccI GTMKAC 1 cut(s) 737
AccII CGCG 1 cut(s) 1409
AciI CCGC 3 cut(s) 157, 1458, 1886
AclI AACGTT 1 cut(s) 961
AclWI GGATC 5 cut(s) 1142, 1155, 1696, 1761, 2005
AcoI YGGCCR 1 cut(s) 1738
AcsI RAATTY 5 cut(s) 231, 722, 867, 1062, 1331
AcuI CTGAAG 1 cut(s) 1553
AfaI GTAC 8 cut(s) 103, 957, 1456, 1673, 1679, 1733, 1807, 1857
AfiI CCNNNNNNNGG 7 cut(s) 98, 163, 385, 581, 1249, 1583, 1892
AflII CTTAAG 1 cut(s) 1316
AgsI TTSAA 8 cut(s) 128, 163, 223, 1021, 1046, 1168, 1271, 1795
AjnI CCWGG 4 cut(s) 406, 1595, 1704, 1735
AleI CACNNNNGTG 1 cut(s) 1471
AluBI AGCT 7 cut(s) 131, 287, 434, 1163, 1274, 1382, 1529
AluI AGCT 7 cut(s) 131, 287, 434, 1163, 1274, 1382, 1529
Alw21I GWGCWC 4 cut(s) 441, 1261, 1615, 1979
Alw26I GTCTC 3 cut(s) 853, 1026, 1422
AlwI GGATC 5 cut(s) 1142, 1155, 1696, 1761, 2005
ApaI GGGCCC 1 cut(s) 575
ApeKI GCWGC 8 cut(s) 287, 302, 395, 702, 1479, 1780, 2032, 2035
ApoI RAATTY 5 cut(s) 231, 722, 867, 1062, 1331
AseI ATTAAT 1 cut(s) 1121
Asp700I GAANNNNTTC 1 cut(s) 218
Asp718I GGTACC 1 cut(s) 101
AspLEI GCGC 4 cut(s) 602, 912, 1409, 1922
AspS9I GGNCC 7 cut(s) 362, 512, 571, 572, 830, 1140, 1657
AsuC2I CCSGG 1 cut(s) 719
AsuHPI GGTGA 6 cut(s) 269, 321, 1363, 1369, 1526, 2017
AvaII GGWCC 1 cut(s) 1657
BaeGI GKGCMC 2 cut(s) 575, 610
BalI TGGCCA 1 cut(s) 1740
BamHI GGATCC 1 cut(s) 1147
BanI GGYRCC 2 cut(s) 101, 1306
BanII GRGCYC 1 cut(s) 575
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 1 cut(s) 1802
Bbv12I GWGCWC 4 cut(s) 441, 1261, 1615, 1979
BbvI GCAGC 8 cut(s) 274, 289, 382, 714, 1466, 1792, 2019, 2022
BccI CCATC 9 cut(s) 479, 480, 572, 664, 766, 1208, 1431, 1807, 1954
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 4 cut(s) 408, 1597, 1706, 1737
BclI TGATCA 1 cut(s) 274
BcnI CCSGG 1 cut(s) 719
BcoDI GTCTC 3 cut(s) 853, 1026, 1422
BfaI CTAG 5 cut(s) 174, 516, 1152, 1182, 1379
BfmI CTRYAG 1 cut(s) 778
BfrI CTTAAG 1 cut(s) 1316
BfuAI ACCTGC 1 cut(s) 89
BisI GCNGC 9 cut(s) 288, 303, 396, 703, 1480, 1781, 1886, 2033, 2036
BlpI GCTNAGC 1 cut(s) 435
BlsI GCNGC 9 cut(s) 289, 304, 397, 704, 1481, 1782, 1887, 2034, 2037
Bme1390I CCNGG 5 cut(s) 408, 719, 1597, 1706, 1737
Bme18I GGWCC 1 cut(s) 1657
BmgT120I GGNCC 7 cut(s) 362, 512, 571, 572, 830, 1140, 1657
BmiI GGNNCC 5 cut(s) 103, 573, 1149, 1308, 1602
BmrFI CCNGG 5 cut(s) 408, 719, 1597, 1706, 1737
BmrI ACTGGG 3 cut(s) 703, 741, 1842
BmsI GCATC 7 cut(s) 85, 543, 659, 932, 1116, 1215, 1534
BmuI ACTGGG 3 cut(s) 703, 741, 1842
BpiI GAAGAC 1 cut(s) 1802
BpmI CTGGAG 1 cut(s) 1900
Bpu1102I GCTNAGC 1 cut(s) 435
BpuEI CTTGAG 2 cut(s) 1322, 1673
BpuMI CCSGG 1 cut(s) 719
Bsa29I ATCGAT 1 cut(s) 1756
BsaI GGTCTC 1 cut(s) 1422
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 163, 385, 581, 1249, 1583, 1892
Bse1I ACTGG 5 cut(s) 698, 736, 902, 1243, 1837
BseBI CCWGG 4 cut(s) 408, 1597, 1706, 1737
BseCI ATCGAT 1 cut(s) 1756
BseGI GGATG 5 cut(s) 675, 754, 1109, 1219, 1442
BseLI CCNNNNNNNGG 7 cut(s) 98, 163, 385, 581, 1249, 1583, 1892
BseMII CTCAG 5 cut(s) 426, 444, 1361, 1460, 1994
BseNI ACTGG 5 cut(s) 698, 736, 902, 1243, 1837
BseRI GAGGAG 3 cut(s) 122, 125, 831
BseSI GKGCMC 2 cut(s) 575, 610
BseXI GCAGC 8 cut(s) 274, 289, 382, 714, 1466, 1792, 2019, 2022
BseYI CCCAGC 2 cut(s) 1137, 1967
BsgI GTGCAG 2 cut(s) 485, 2021
Bsh1236I CGCG 1 cut(s) 1409
BshNI GGYRCC 2 cut(s) 101, 1306
BshVI ATCGAT 1 cut(s) 1756
BsiHKAI GWGCWC 4 cut(s) 441, 1261, 1615, 1979
BsiSI CCGG 1 cut(s) 719
BslFI GGGAC 4 cut(s) 510, 986, 1385, 1483
BslI CCNNNNNNNGG 7 cut(s) 98, 163, 385, 581, 1249, 1583, 1892
BsmAI GTCTC 3 cut(s) 853, 1026, 1422
BsmFI GGGAC 4 cut(s) 510, 986, 1385, 1483
BsmI GAATGC 3 cut(s) 290, 322, 1691
Bso31I GGTCTC 1 cut(s) 1422
Bsp120I GGGCCC 1 cut(s) 571
Bsp1286I GDGCHC 6 cut(s) 441, 575, 610, 1261, 1615, 1979
Bsp1407I TGTACA 1 cut(s) 955
Bsp143I GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
Bsp1720I GCTNAGC 1 cut(s) 435
Bsp19I CCATGG 4 cut(s) 64, 334, 946, 1432
BspACI CCGC 3 cut(s) 157, 1458, 1886
BspCNI CTCAG 5 cut(s) 427, 443, 1360, 1461, 1995
BspDI ATCGAT 1 cut(s) 1756
BspFNI CGCG 1 cut(s) 1409
BspLI GGNNCC 5 cut(s) 103, 573, 1149, 1308, 1602
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 5 cut(s) 1142, 1155, 1696, 1761, 2005
BspT107I GGYRCC 2 cut(s) 101, 1306
BspTI CTTAAG 1 cut(s) 1316
BspTNI GGTCTC 1 cut(s) 1422
BsrGI TGTACA 1 cut(s) 955
BsrI ACTGG 5 cut(s) 698, 736, 902, 1243, 1837
BssMI GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 5 cut(s) 64, 334, 384, 946, 1432
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 4 cut(s) 408, 1597, 1706, 1737
Bst4CI ACNGT 9 cut(s) 548, 779, 875, 977, 1085, 1535, 1805, 2029, 2042
Bst6I CTCTTC 1 cut(s) 1572
BstAFI CTTAAG 1 cut(s) 1316
BstAUI TGTACA 1 cut(s) 955
BstC8I GCNNGC 8 cut(s) 117, 348, 361, 598, 1013, 1131, 1135, 1285
BstDEI CTNAG 6 cut(s) 430, 435, 1347, 1401, 1469, 2003
BstDSI CCRYGG 4 cut(s) 64, 334, 946, 1432
BstF5I GGATG 5 cut(s) 675, 754, 1109, 1219, 1442
BstFNI CGCG 1 cut(s) 1409
BstHHI GCGC 4 cut(s) 602, 912, 1409, 1922
BstKTI GATC 8 cut(s) 277, 628, 837, 1150, 1704, 1756, 1760, 2013
BstMAI GTCTC 3 cut(s) 853, 1026, 1422
BstMBI GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
BstMWI GCNNNNNNNGC 5 cut(s) 287, 356, 907, 1139, 1280
BstNI CCWGG 4 cut(s) 408, 1597, 1706, 1737
BstNSI RCATGY 2 cut(s) 537, 600
BstSCI CCNGG 5 cut(s) 406, 717, 1595, 1704, 1735
BstSFI CTRYAG 1 cut(s) 778
BstSLI GKGCMC 2 cut(s) 575, 610
BstUI CGCG 1 cut(s) 1409
BstV1I GCAGC 8 cut(s) 274, 289, 382, 714, 1466, 1792, 2019, 2022
BstV2I GAAGAC 1 cut(s) 1802
BstX2I RGATCY 2 cut(s) 1147, 2010
BstYI RGATCY 2 cut(s) 1147, 2010
Bsu15I ATCGAT 1 cut(s) 1756
BsuTUI ATCGAT 1 cut(s) 1756
BtgI CCRYGG 4 cut(s) 64, 334, 946, 1432
BtsCI GGATG 5 cut(s) 675, 754, 1109, 1219, 1442
BtsI GCAGTG 3 cut(s) 184, 740, 1922
BtsIMutI CAGTG 5 cut(s) 184, 740, 1466, 1922, 2038
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 8 cut(s) 117, 348, 361, 598, 1013, 1131, 1135, 1285
CfoI GCGC 4 cut(s) 602, 912, 1409, 1922
Cfr13I GGNCC 7 cut(s) 362, 512, 571, 572, 830, 1140, 1657
ClaI ATCGAT 1 cut(s) 1756
Csp6I GTAC 8 cut(s) 102, 956, 1455, 1672, 1678, 1732, 1806, 1856
CspCI CAANNNNNGTGG 2 cut(s) 805, 840
CviQI GTAC 8 cut(s) 102, 956, 1455, 1672, 1678, 1732, 1806, 1856
DdeI CTNAG 6 cut(s) 430, 435, 1347, 1401, 1469, 2003
DpnI GATC 8 cut(s) 276, 627, 836, 1149, 1703, 1755, 1759, 2012
DpnII GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
EaeI YGGCCR 1 cut(s) 1738
Eam1104I CTCTTC 1 cut(s) 1572
EarI CTCTTC 1 cut(s) 1572
Eco130I CCWWGG 5 cut(s) 64, 334, 384, 946, 1432
Eco147I AGGCCT 1 cut(s) 1709
Eco24I GRGCYC 1 cut(s) 575
Eco31I GGTCTC 1 cut(s) 1422
Eco32I GATATC 1 cut(s) 1344
Eco47I GGWCC 1 cut(s) 1657
Eco57I CTGAAG 1 cut(s) 1553
EcoO109I RGGNCCY 4 cut(s) 512, 571, 572, 1657
EcoRI GAATTC 1 cut(s) 722
EcoRII CCWGG 4 cut(s) 406, 1595, 1704, 1735
EcoRV GATATC 1 cut(s) 1344
EcoT14I CCWWGG 5 cut(s) 64, 334, 384, 946, 1432
EcoT22I ATGCAT 1 cut(s) 598
EcoT38I GRGCYC 1 cut(s) 575
ErhI CCWWGG 5 cut(s) 64, 334, 384, 946, 1432
FalI AAGNNNNNCTT 2 cut(s) 437, 469
FaqI GGGAC 4 cut(s) 510, 986, 1385, 1483
FauNDI CATATG 1 cut(s) 271
FbaI TGATCA 1 cut(s) 274
FblI GTMKAC 1 cut(s) 737
Fnu4HI GCNGC 9 cut(s) 288, 303, 396, 703, 1480, 1781, 1886, 2033, 2036
FokI GGATG 5 cut(s) 682, 741, 1116, 1226, 1449
FriOI GRGCYC 1 cut(s) 575
Fsp4HI GCNGC 9 cut(s) 288, 303, 396, 703, 1480, 1781, 1886, 2033, 2036
FspBI CTAG 5 cut(s) 174, 516, 1152, 1182, 1379
FspI TGCGCA 2 cut(s) 601, 1921
GlaI GCGC 4 cut(s) 601, 911, 1408, 1921
GluI GCNGC 9 cut(s) 288, 303, 396, 703, 1480, 1781, 1886, 2033, 2036
GsaI CCCAGC 2 cut(s) 1141, 1971
GsuI CTGGAG 1 cut(s) 1900
HapII CCGG 1 cut(s) 719
HhaI GCGC 4 cut(s) 602, 912, 1409, 1922
Hin6I GCGC 4 cut(s) 600, 910, 1407, 1920
HinP1I GCGC 4 cut(s) 600, 910, 1407, 1920
HincII GTYRAC 2 cut(s) 786, 1932
HindII GTYRAC 2 cut(s) 786, 1932
HindIII AAGCTT 3 cut(s) 129, 1161, 1272
HinfI GANTC 7 cut(s) 619, 676, 1218, 1267, 1564, 1573, 1838
HpaII CCGG 1 cut(s) 719
HphI GGTGA 6 cut(s) 269, 321, 1363, 1369, 1526, 2017
Hpy166II GTNNAC 7 cut(s) 528, 738, 786, 878, 956, 1413, 1932
Hpy188I TCNGA 9 cut(s) 201, 477, 566, 928, 1103, 1208, 1423, 1450, 1572
Hpy8I GTNNAC 7 cut(s) 528, 738, 786, 878, 956, 1413, 1932
HpyAV CCTTC 8 cut(s) 17, 63, 248, 439, 692, 1740, 1744, 1770
HpyCH4III ACNGT 9 cut(s) 548, 779, 875, 977, 1085, 1535, 1805, 2029, 2042
HpyCH4IV ACGT 2 cut(s) 961, 1395
HpyF10VI GCNNNNNNNGC 5 cut(s) 287, 356, 907, 1139, 1280
HpyF3I CTNAG 6 cut(s) 430, 435, 1347, 1401, 1469, 2003
HpySE526I ACGT 2 cut(s) 961, 1395
HspAI GCGC 4 cut(s) 600, 910, 1407, 1920
KpnI GGTACC 1 cut(s) 105
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
LmnI GCTCC 2 cut(s) 112, 1610
Lsp1109I GCAGC 8 cut(s) 274, 289, 382, 714, 1466, 1792, 2019, 2022
LweI GCATC 7 cut(s) 85, 543, 659, 932, 1116, 1215, 1534
MaeI CTAG 5 cut(s) 174, 516, 1152, 1182, 1379
MaeII ACGT 2 cut(s) 961, 1395
MaeIII GTNAC 6 cut(s) 166, 179, 458, 587, 1186, 1391
MalI GATC 8 cut(s) 276, 627, 836, 1149, 1703, 1755, 1759, 2012
MboI GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
MboII GAAGA 6 cut(s) 494, 1036, 1085, 1559, 1689, 1807
MfeI CAATTG 1 cut(s) 1053
MflI RGATCY 2 cut(s) 1147, 2010
MhlI GDGCHC 6 cut(s) 441, 575, 610, 1261, 1615, 1979
MlsI TGGCCA 1 cut(s) 1740
MluNI TGGCCA 1 cut(s) 1740
MlyI GAGTC 2 cut(s) 1558, 1582
MmeI TCCRAC 3 cut(s) 1428, 1605, 2038
Mox20I TGGCCA 1 cut(s) 1740
Mph1103I ATGCAT 1 cut(s) 598
MroXI GAANNNNTTC 1 cut(s) 218
MscI TGGCCA 1 cut(s) 1740
MseI TTAA 7 cut(s) 12, 206, 540, 1121, 1317, 1712, 2044
MslI CAYNNNNRTG 6 cut(s) 477, 613, 918, 951, 1471, 1618
Msp20I TGGCCA 1 cut(s) 1740
MspA1I CMGCKG 3 cut(s) 287, 434, 1888
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 1 cut(s) 719
MspR9I CCNGG 5 cut(s) 408, 719, 1597, 1706, 1737
MunI CAATTG 1 cut(s) 1053
Mva1269I GAATGC 3 cut(s) 290, 322, 1691
MvaI CCWGG 4 cut(s) 408, 1597, 1706, 1737
MvnI CGCG 1 cut(s) 1409
MwoI GCNNNNNNNGC 5 cut(s) 287, 356, 907, 1139, 1280
NciI CCSGG 1 cut(s) 719
NcoI CCATGG 4 cut(s) 64, 334, 946, 1432
NdeI CATATG 1 cut(s) 271
NdeII GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
NlaIV GGNNCC 5 cut(s) 103, 573, 1149, 1308, 1602
NmeAIII GCCGAG 1 cut(s) 1168
NmuCI GTSAC 4 cut(s) 166, 179, 587, 1391
NsbI TGCGCA 2 cut(s) 601, 1921
NsiI ATGCAT 1 cut(s) 598
NspI RCATGY 2 cut(s) 537, 600
OliI CACNNNNGTG 1 cut(s) 1471
PaeI GCATGC 1 cut(s) 600
PceI AGGCCT 1 cut(s) 1709
PcsI WCGNNNNNNNCGW 2 cut(s) 958, 1680
PctI GAATGC 3 cut(s) 290, 322, 1691
PdmI GAANNNNTTC 1 cut(s) 218
PfeI GAWTC 5 cut(s) 619, 676, 1218, 1267, 1838
PflFI GACNNNGTC 2 cut(s) 733, 1661
PflMI CCANNNNNTGG 1 cut(s) 1583
PkrI GCNGC 9 cut(s) 289, 304, 397, 704, 1481, 1782, 1887, 2034, 2037
PleI GAGTC 2 cut(s) 1558, 1581
PpsI GAGTC 2 cut(s) 1558, 1581
PpuMI RGGWCCY 1 cut(s) 1657
PshBI ATTAAT 1 cut(s) 1121
Psp1406I AACGTT 1 cut(s) 961
Psp5II RGGWCCY 1 cut(s) 1657
Psp6I CCWGG 4 cut(s) 406, 1595, 1704, 1735
PspFI CCCAGC 2 cut(s) 1137, 1967
PspGI CCWGG 4 cut(s) 406, 1595, 1704, 1735
PspN4I GGNNCC 5 cut(s) 103, 573, 1149, 1308, 1602
PspOMI GGGCCC 1 cut(s) 571
PspPI GGNCC 7 cut(s) 362, 512, 571, 572, 830, 1140, 1657
PspPPI RGGWCCY 1 cut(s) 1657
PsrI GAACNNNNNNTAC 2 cut(s) 1073, 1105
PsuI RGATCY 2 cut(s) 1147, 2010
PsyI GACNNNGTC 2 cut(s) 733, 1661
PvuII CAGCTG 2 cut(s) 287, 434
RsaI GTAC 8 cut(s) 103, 957, 1456, 1673, 1679, 1733, 1807, 1857
RsaNI GTAC 8 cut(s) 102, 956, 1455, 1672, 1678, 1732, 1806, 1856
RseI CAYNNNNRTG 6 cut(s) 477, 613, 918, 951, 1471, 1618
SaqAI TTAA 7 cut(s) 12, 206, 540, 1121, 1317, 1712, 2044
SatI GCNGC 9 cut(s) 288, 303, 396, 703, 1480, 1781, 1886, 2033, 2036
Sau3AI GATC 8 cut(s) 274, 625, 834, 1147, 1701, 1753, 1757, 2010
Sau96I GGNCC 7 cut(s) 362, 512, 571, 572, 830, 1140, 1657
SchI GAGTC 2 cut(s) 1558, 1582
ScrFI CCNGG 5 cut(s) 408, 719, 1597, 1706, 1737
SduI GDGCHC 6 cut(s) 441, 575, 610, 1261, 1615, 1979
SfaNI GCATC 7 cut(s) 85, 543, 659, 932, 1116, 1215, 1534
SfcI CTRYAG 1 cut(s) 778
SinI GGWCC 1 cut(s) 1657
SmiMI CAYNNNNRTG 6 cut(s) 477, 613, 918, 951, 1471, 1618
SmlI CTYRAG 3 cut(s) 1316, 1337, 1652
SmoI CTYRAG 3 cut(s) 1316, 1337, 1652
SphI GCATGC 1 cut(s) 600
SseBI AGGCCT 1 cut(s) 1709
SsiI CCGC 3 cut(s) 157, 1458, 1886
SspMI CTAG 5 cut(s) 174, 516, 1152, 1182, 1379
StuI AGGCCT 1 cut(s) 1709
StyD4I CCNGG 5 cut(s) 406, 717, 1595, 1704, 1735
StyI CCWWGG 5 cut(s) 64, 334, 384, 946, 1432
TaaI ACNGT 9 cut(s) 548, 779, 875, 977, 1085, 1535, 1805, 2029, 2042
TaiI ACGT 2 cut(s) 964, 1398
TaqI TCGA 4 cut(s) 87, 1683, 1700, 1756
TaqII GACCGA 1 cut(s) 1440
TatI WGTACW 2 cut(s) 955, 1677
TauI GCSGC 1 cut(s) 1888
TfiI GAWTC 5 cut(s) 619, 676, 1218, 1267, 1838
Tru1I TTAA 7 cut(s) 12, 206, 540, 1121, 1317, 1712, 2044
Tru9I TTAA 7 cut(s) 12, 206, 540, 1121, 1317, 1712, 2044
TscAI CASTG 5 cut(s) 184, 747, 1473, 1922, 2045
TseFI GTSAC 4 cut(s) 166, 179, 587, 1391
TseI GCWGC 8 cut(s) 287, 302, 395, 702, 1479, 1780, 2032, 2035
Tsp45I GTSAC 4 cut(s) 166, 179, 587, 1391
TspDTI ATGAA 6 cut(s) 495, 743, 1055, 1086, 1683, 1758
TspGWI ACGGA 2 cut(s) 1313, 1379
TspRI CASTG 5 cut(s) 184, 747, 1473, 1922, 2045
Tth111I GACNNNGTC 2 cut(s) 733, 1661
Van91I CCANNNNNTGG 1 cut(s) 1583
Vha464I CTTAAG 1 cut(s) 1316
VpaK11BI GGWCC 1 cut(s) 1657
VspI ATTAAT 1 cut(s) 1121
XapI RAATTY 5 cut(s) 231, 722, 867, 1062, 1331
XceI RCATGY 2 cut(s) 537, 600
XmiI GTMKAC 1 cut(s) 737
XmnI GAANNNNTTC 1 cut(s) 218
XspI CTAG 5 cut(s) 174, 516, 1152, 1182, 1379
Zsp2I ATGCAT 1 cut(s) 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.