Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002539.1

Orthogroup ID

OG0000247

Physical Location & Seq

Genomic Coordinates Reverse (-)

419644 .. 423475

Gene Structure 3832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002539.1_g000106.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1275 bp

atggaggagggtgcacctcggagcaaatctatggtggaattgaacaaattcattgtttctctcgtcgccatcttaggcttttgcctccaacttcagtttccaaattcgtctccagaccacagcagtagactattgatgaggctgtttgttatcgacgtatcggcttacttcgggtcaataggtgtcatgatactccaaactgatcacagtacagcagactttcgtaaattcatgaataggattagcatcttgttgggaacttttgcttccattttagaactgctcatcctcgttccagcttttggatggctcgttctcttcttctggtgcatctgttttgttagcgttgcgagcaagtcataccaatacttgaaaacactaagtgaaagtgcggtttcagctcttgttctagcctctggcgaattgaaagataagctgaacgcgatgaatagccacttgatgaaattttttaaattttcagggatatttgttgccgaaaaacttaaaaagctgatccgaatttgccgctggacagagcatgaagcccaaaaccagaaccagatcatcgatggccttcaaatttcagataccactgccgcccaccttgaagatccaaattccaaaaagccagaaccgatggtgccaccttcaaaaccgatcggaaaatactcgaaccggtccccagaaataccgaaatcctctctgcccaattcgaagacttcctcaccacctcctacagccatactccaccacctgcagcgtctccaccccagaaacccggaaccgaaaatttcaccacctgaaccgctcaccagaagctcacctgccctaaaaccgccgtctcaccttcagcttgcagattctctctctgccctgtccctgatgagtaacctgaacaaattggactttactctattgggaacaactgaccctaaatatcacaggtgggctcatgatgtccgccagcatctcaaggcatttggaatcctggatacaattctcgagcctagccaggacgtgttaactgttgagcaagctcaagtagccgccaatataggagaacacggaaccgaagaggtcaacgtggaaagagagagggaggcaacgcctctggctatgttggtggcgccaccaacactaagaggcaccgcttccgtcaaccaccagcctagggctggcgcagtccctatccatgatgccatggatggcgtccatcatggtgatggcgccctaggtgatgttgcaatcaccaacttgcttaaaatagcgttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005886 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0031090 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sacchrp_dh_NADP

Protein Analysis

424

Amino Acids

46.74

Weight (kDa)

7.79

Isoelectric Point (pI)

44.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000247)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20722 FvH4_6g47643 FvH4_6g47644 FvH4_6g47651 FvH4_6g47660 FvH4_6g47681 FvH4_6g47710 FvH4_6g47721 FvH4_6g47722 FvH4_6g47723 FvH4_6g47731 FvH4_6g47732 FvH4_7g07791
malus_domestica	MD01G1174200.v1.1 MD09G1046300.v1.1 MD17G1055400.v1.1
prunus_persica	Prupe.3G260500_v2.0.a1 Prupe.3G260600_v2.0.a1 Prupe.3G260700_v2.0.a1 Prupe.3G260800_v2.0.a1 Prupe.3G260900_v2.0.a1 Prupe.3G261100_v2.0.a1 Prupe.3G261100_v2.0.a1 Prupe.3G261100_v2.0.a1
pyrus_communis	pycom01g18590 pycom08g18530 pycom09g03820 pycom09g04260 pycom111g03590 pycom111g04940 pycom111g05070 pycom17g05450
rosa_chinensis	RchiOBHm_Chr1g0315341 RchiOBHm_Chr2g0166831
rosa_laevigata	RLG00000009567 RLG00000009568 RLG00000013046 RLG00000018053 RLG00000018054 RLG00000018055 RLG00000021644 RLG00000021647 RLG00000021648 RLG00000021651 RLG00000021653 RLG00000021655 RLG00000021656 RLG00000021661 RLG00000021668
rosa_multiflora	Rmu_co8319251.1_g000001 Rmu_sc0000612.1_g000004 Rmu_sc0000612.1_g000013 Rmu_sc0000612.1_g000022 Rmu_sc0000690.1_g000022 Rmu_sc0000768.1_g000029 Rmu_sc0000820.1_g000021 Rmu_sc0000949.1_g000012 Rmu_sc0001432.1_g000005 Rmu_sc0002322.1_g000037 Rmu_sc0002539.1_g000106 Rmu_sc0002735.1_g000005 Rmu_sc0002966.1_g000004 Rmu_sc0002966.1_g000006 Rmu_sc0002966.1_g000007 Rmu_sc0005344.1_g000001 Rmu_sc0006325.1_g000034 Rmu_sc0006838.1_g000007 Rmu_sc0006838.1_g000019 Rmu_sc0008490.1_g000023 Rmu_sc0008530.1_g000001 Rmu_sc0012743.1_g000005 Rmu_sc0013600.1_g000004 Rmu_sc0016890.1_g000002
rosa_roxburghii	Rroxscaffold_1G00012720 Rroxscaffold_1G00013420 Rroxscaffold_2G00083970 Rroxscaffold_2G00084070 Rroxscaffold_2G00084110 Rroxscaffold_2G00084170 Rroxscaffold_2G00084190 Rroxscaffold_2G00084200 Rroxscaffold_2G00084210 Rroxscaffold_2G00084530 Rroxscaffold_2G00084540 Rroxscaffold_2G00129390 Rroxscaffold_2G00129510 Rroxscaffold_4G00327620 Rroxscaffold_4G00328190 Rroxscaffold_5G00340960 Rroxscaffold_5G00340970 Rroxscaffold_7G00187900
rosa_rugosa	Rorug02G0186300 Rorug02G0186300 Rorug02G0186400 Rorug02G0525600 Rorug02G0525700 Rorug05G0573300 Rorug06G0132500
rosa_samantha	Rh1CG075200 Rh1DG027600 Rh2AG240700 Rh2AG240800 Rh2AG591700 Rh2AG591900 Rh2AG592200 Rh2AG592300 Rh2AG592400 Rh2AG592600 Rh2AG592700 Rh2AG641300 Rh2BG254400 Rh2BG254700 Rh2BG254800 Rh2BG603800 Rh2CG244800 Rh2CG244900 Rh2DG248700 Rh2DG248800 Rh2DG614700 Rh2DG614800 Rh2DG614900 Rh2DG615100 Rh2DG615400 Rh2DG615500 Rh2DG615700 Rh2DG668300 Rh5AG445300 Rh5DG375200 Rh5DG476800 Rh6BG082200 Rh6BG247400 Rh6CG249200
rosa_wichuraiana	Rw2G049330 Rw4G005360 Rw5G032950 Rw5G041590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	762, 832
Acc36I	ACCTGC	2 cut(s)	762, 832
AccB1I	GGYRCC	4 cut(s)	640, 1126, 1145, 1226
AccB7I	CCANNNNNTGG	1 cut(s)	302
AccBSI	CCGCTC	1 cut(s)	808
AccI	GTMKAC	1 cut(s)	127
AccII	CGCG	1 cut(s)	443
AciI	CCGC	8 cut(s)	392, 526, 597, 806, 836, 961, 1047, 1149
AclWI	GGATC	2 cut(s)	508, 605
AcsI	RAATTY	9 cut(s)	47, 103, 227, 464, 473, 519, 579, 616, 789
AcuI	CTGAAG	2 cut(s)	77, 833
AcyI	GRCGYC	3 cut(s)	1127, 1209, 1227
AdeI	CACNNNGTG	1 cut(s)	383
AfaI	GTAC	1 cut(s)	211
AfiI	CCNNNNNNNGG	3 cut(s)	302, 1171, 1175
AflIII	ACRYGT	1 cut(s)	1017
AgeI	ACCGGT	1 cut(s)	675
AgsI	TTSAA	6 cut(s)	43, 373, 427, 578, 608, 651
AjiI	CACGTC	1 cut(s)	1018
AjnI	CCWGG	2 cut(s)	987, 1011
AjuI	GAANNNNNNNTTGG	2 cut(s)	81, 113
AloI	GAACNNNNNNTCC	4 cut(s)	270, 297, 302, 329
AluBI	AGCT	7 cut(s)	299, 401, 436, 511, 819, 853, 1037
AluI	AGCT	7 cut(s)	299, 401, 436, 511, 819, 853, 1037
Alw21I	GWGCWC	1 cut(s)	16
Alw26I	GTCTC	3 cut(s)	114, 767, 846
Alw44I	GTGCAC	1 cut(s)	12
AlwI	GGATC	2 cut(s)	508, 605
Ama87I	CYCGRG	1 cut(s)	1001
AoxI	GGCC	1 cut(s)	571
ApaLI	GTGCAC	1 cut(s)	12
ApeKI	GCWGC	1 cut(s)	757
ApoI	RAATTY	9 cut(s)	47, 103, 227, 464, 473, 519, 579, 616, 789
AsiGI	ACCGGT	1 cut(s)	675
Asp700I	GAANNNNTTC	1 cut(s)	47
AspA2I	CCTAGG	2 cut(s)	1169, 1231
AspLEI	GCGC	3 cut(s)	1129, 1181, 1229
AspS9I	GGNCC	1 cut(s)	678
AsuC2I	CCSGG	1 cut(s)	779
AsuHPI	GGTGA	8 cut(s)	717, 786, 802, 813, 836, 1232, 1240, 1247
AsuII	TTCGAA	1 cut(s)	713
AvaI	CYCGRG	1 cut(s)	1001
AvaII	GGWCC	1 cut(s)	678
AvrII	CCTAGG	2 cut(s)	1169, 1231
BaeGI	GKGCMC	1 cut(s)	16
BanI	GGYRCC	4 cut(s)	640, 1126, 1145, 1226
BanII	GRGCYC	1 cut(s)	952
BbsI	GAAGAC	1 cut(s)	722
Bbv12I	GWGCWC	1 cut(s)	16
BbvI	GCAGC	1 cut(s)	769
BccI	CCATC	7 cut(s)	77, 300, 563, 631, 1199, 1217, 1221
BceAI	ACGGC	1 cut(s)	823
BciT130I	CCWGG	2 cut(s)	989, 1013
BciVI	GTATCC	1 cut(s)	985
BclI	TGATCA	1 cut(s)	202
BcnI	CCSGG	1 cut(s)	779
BcoDI	GTCTC	3 cut(s)	114, 767, 846
BfaI	CTAG	4 cut(s)	410, 1008, 1170, 1232
BfmI	CTRYAG	2 cut(s)	735, 755
BfoI	RGCGCY	2 cut(s)	1130, 1230
BfuAI	ACCTGC	2 cut(s)	762, 832
BfuI	GTATCC	1 cut(s)	985
BisI	GCNGC	4 cut(s)	526, 597, 758, 1047
BlnI	CCTAGG	2 cut(s)	1169, 1231
BlsI	GCNGC	4 cut(s)	527, 598, 759, 1048
Bme1390I	CCNGG	3 cut(s)	779, 989, 1013
Bme18I	GGWCC	1 cut(s)	678
BmeT110I	CYCGRG	1 cut(s)	1001
BmgBI	CACGTC	1 cut(s)	1018
BmgT120I	GGNCC	1 cut(s)	678
BmiI	GGNNCC	7 cut(s)	642, 680, 783, 1069, 1128, 1147, 1228
BmrFI	CCNGG	3 cut(s)	779, 989, 1013
BmsI	GCATC	4 cut(s)	255, 339, 976, 1186
BpiI	GAAGAC	1 cut(s)	722
BpmI	CTGGAG	1 cut(s)	96
Bpu14I	TTCGAA	1 cut(s)	713
BpuEI	CTTGAG	2 cut(s)	956, 1023
BpuMI	CCSGG	1 cut(s)	779
Bsa29I	ATCGAT	1 cut(s)	567
BsaBI	GATNNNNATC	1 cut(s)	245
BsaHI	GRCGYC	3 cut(s)	1127, 1209, 1227
BsaJI	CCNNGG	4 cut(s)	17, 1169, 1200, 1231
BsaWI	WCCGGW	1 cut(s)	675
Bsc4I	CCNNNNNNNGG	3 cut(s)	302, 1171, 1175
Bse118I	RCCGGY	1 cut(s)	675
Bse8I	GATNNNNATC	1 cut(s)	245
BseBI	CCWGG	2 cut(s)	989, 1013
BseCI	ATCGAT	1 cut(s)	567
BseDI	CCNNGG	4 cut(s)	17, 1169, 1200, 1231
BseGI	GGATG	3 cut(s)	285, 311, 1210
BseJI	GATNNNNATC	1 cut(s)	245
BseLI	CCNNNNNNNGG	3 cut(s)	302, 1171, 1175
BseRI	GAGGAG	1 cut(s)	20
BseSI	GKGCMC	1 cut(s)	16
BseXI	GCAGC	1 cut(s)	769
Bsh1236I	CGCG	1 cut(s)	443
Bsh1285I	CGRYCG	1 cut(s)	660
BshFI	GGCC	1 cut(s)	573
BshNI	GGYRCC	4 cut(s)	640, 1126, 1145, 1226
BshTI	ACCGGT	1 cut(s)	675
BshVI	ATCGAT	1 cut(s)	567
BsiEI	CGRYCG	1 cut(s)	660
BsiHKAI	GWGCWC	1 cut(s)	16
BsiHKCI	CYCGRG	1 cut(s)	1001
BsiSI	CCGG	2 cut(s)	676, 779
BslFI	GGGAC	3 cut(s)	664, 862, 1169
BslI	CCNNNNNNNGG	3 cut(s)	302, 1171, 1175
BsmAI	GTCTC	3 cut(s)	114, 767, 846
BsmBI	CGTCTC	3 cut(s)	114, 767, 846
BsmFI	GGGAC	3 cut(s)	664, 862, 1169
BsnI	GGCC	1 cut(s)	573
BsoBI	CYCGRG	1 cut(s)	1001
Bsp119I	TTCGAA	1 cut(s)	713
Bsp1286I	GDGCHC	2 cut(s)	16, 952
Bsp143I	GATC	5 cut(s)	202, 513, 561, 610, 657
Bsp19I	CCATGG	1 cut(s)	1200
BspACI	CCGC	8 cut(s)	392, 526, 597, 806, 836, 961, 1047, 1149
BspANI	GGCC	1 cut(s)	573
BspDI	ATCGAT	1 cut(s)	567
BspFNI	CGCG	1 cut(s)	443
BspHI	TCATGA	3 cut(s)	186, 231, 952
BspLI	GGNNCC	7 cut(s)	642, 680, 783, 1069, 1128, 1147, 1228
BspMAI	CTGCAG	1 cut(s)	759
BspMI	ACCTGC	2 cut(s)	762, 832
BspPI	GGATC	2 cut(s)	508, 605
BspT104I	TTCGAA	1 cut(s)	713
BspT107I	GGYRCC	4 cut(s)	640, 1126, 1145, 1226
BsrBI	CCGCTC	1 cut(s)	808
BsrFI	RCCGGY	1 cut(s)	675
BssAI	RCCGGY	1 cut(s)	675
BssECI	CCNNGG	4 cut(s)	17, 1169, 1200, 1231
BssMI	GATC	5 cut(s)	202, 513, 561, 610, 657
BssNI	GRCGYC	3 cut(s)	1127, 1209, 1227
BssT1I	CCWWGG	3 cut(s)	1169, 1200, 1231
Bst2UI	CCWGG	2 cut(s)	989, 1013
Bst4CI	ACNGT	2 cut(s)	209, 1027
Bst6I	CTCTTC	2 cut(s)	323, 1068
BstACI	GRCGYC	3 cut(s)	1127, 1209, 1227
BstBI	TTCGAA	1 cut(s)	713
BstC8I	GCNNGC	5 cut(s)	352, 855, 965, 1035, 1177
BstDEI	CTNAG	3 cut(s)	73, 380, 1139
BstDSI	CCRYGG	1 cut(s)	1200
BstF5I	GGATG	3 cut(s)	285, 311, 1210
BstFNI	CGCG	1 cut(s)	443
BstH2I	RGCGCY	2 cut(s)	1130, 1230
BstHHI	GCGC	3 cut(s)	1129, 1181, 1229
BstKTI	GATC	5 cut(s)	205, 516, 564, 613, 660
BstMAI	GTCTC	3 cut(s)	114, 767, 846
BstMBI	GATC	5 cut(s)	202, 513, 561, 610, 657
BstMCI	CGRYCG	1 cut(s)	660
BstMWI	GCNNNNNNNGC	3 cut(s)	351, 398, 1043
BstNI	CCWGG	2 cut(s)	989, 1013
BstSCI	CCNGG	3 cut(s)	777, 987, 1011
BstSFI	CTRYAG	2 cut(s)	735, 755
BstSLI	GKGCMC	1 cut(s)	16
BstUI	CGCG	1 cut(s)	443
BstV1I	GCAGC	1 cut(s)	769
BstV2I	GAAGAC	1 cut(s)	722
BstX2I	RGATCY	1 cut(s)	610
BstYI	RGATCY	1 cut(s)	610
Bsu15I	ATCGAT	1 cut(s)	567
BsuI	GTATCC	1 cut(s)	985
BsuRI	GGCC	1 cut(s)	573
BsuTUI	ATCGAT	1 cut(s)	567
BtgI	CCRYGG	1 cut(s)	1200
BtgZI	GCGATG	1 cut(s)	458
BtrI	CACGTC	1 cut(s)	1018
BtsCI	GGATG	3 cut(s)	285, 311, 1210
BtsI	GCAGTG	1 cut(s)	591
BtsIMutI	CAGTG	1 cut(s)	591
BveI	ACCTGC	2 cut(s)	762, 832
Cac8I	GCNNGC	5 cut(s)	352, 855, 965, 1035, 1177
CciI	TCATGA	3 cut(s)	186, 231, 952
CfoI	GCGC	3 cut(s)	1129, 1181, 1229
Cfr10I	RCCGGY	1 cut(s)	675
Cfr13I	GGNCC	1 cut(s)	678
ClaI	ATCGAT	1 cut(s)	567
CseI	GACGC	2 cut(s)	749, 1198
Csp6I	GTAC	1 cut(s)	210
CspAI	ACCGGT	1 cut(s)	675
CviAII	CATG	7 cut(s)	187, 232, 539, 953, 1193, 1201, 1217
CviQI	GTAC	1 cut(s)	210
DdeI	CTNAG	3 cut(s)	73, 380, 1139
DinI	GGCGCC	2 cut(s)	1128, 1228
DpnI	GATC	5 cut(s)	204, 515, 563, 612, 659
DpnII	GATC	5 cut(s)	202, 513, 561, 610, 657
DraI	TTTAAA	1 cut(s)	472
DraIII	CACNNNGTG	1 cut(s)	383
Eam1104I	CTCTTC	2 cut(s)	323, 1068
EarI	CTCTTC	2 cut(s)	323, 1068
EciI	GGCGGA	1 cut(s)	950
Eco130I	CCWWGG	3 cut(s)	1169, 1200, 1231
Eco24I	GRGCYC	1 cut(s)	952
Eco47I	GGWCC	1 cut(s)	678
Eco57I	CTGAAG	2 cut(s)	77, 833
Eco88I	CYCGRG	1 cut(s)	1001
EcoRII	CCWGG	2 cut(s)	987, 1011
EcoT14I	CCWWGG	3 cut(s)	1169, 1200, 1231
EcoT38I	GRGCYC	1 cut(s)	952
EgeI	GGCGCC	2 cut(s)	1128, 1228
EheI	GGCGCC	2 cut(s)	1128, 1228
ErhI	CCWWGG	3 cut(s)	1169, 1200, 1231
Esp3I	CGTCTC	3 cut(s)	114, 767, 846
FaeI	CATG	7 cut(s)	190, 235, 542, 956, 1196, 1204, 1220
FaqI	GGGAC	3 cut(s)	664, 862, 1169
FatI	CATG	7 cut(s)	186, 231, 538, 952, 1192, 1200, 1216
FbaI	TGATCA	1 cut(s)	202
FblI	GTMKAC	1 cut(s)	127
Fnu4HI	GCNGC	4 cut(s)	526, 597, 758, 1047
FokI	GGATG	3 cut(s)	272, 318, 1217
FriOI	GRGCYC	1 cut(s)	952
Fsp4HI	GCNGC	4 cut(s)	526, 597, 758, 1047
FspBI	CTAG	4 cut(s)	410, 1008, 1170, 1232
GlaI	GCGC	3 cut(s)	1128, 1180, 1228
GluI	GCNGC	4 cut(s)	526, 597, 758, 1047
GsuI	CTGGAG	1 cut(s)	96
HaeII	RGCGCY	2 cut(s)	1130, 1230
HaeIII	GGCC	1 cut(s)	573
HapII	CCGG	2 cut(s)	676, 779
HgaI	GACGC	2 cut(s)	749, 1198
HhaI	GCGC	3 cut(s)	1129, 1181, 1229
Hin1I	GRCGYC	3 cut(s)	1127, 1209, 1227
Hin1II	CATG	7 cut(s)	190, 235, 542, 956, 1196, 1204, 1220
Hin6I	GCGC	3 cut(s)	1127, 1179, 1227
HinP1I	GCGC	3 cut(s)	1127, 1179, 1227
HincII	GTYRAC	3 cut(s)	1023, 1081, 1159
HindII	GTYRAC	3 cut(s)	1023, 1081, 1159
HinfI	GANTC	2 cut(s)	860, 984
HpaI	GTTAAC	1 cut(s)	1023
HpaII	CCGG	2 cut(s)	676, 779
HphI	GGTGA	8 cut(s)	717, 786, 802, 813, 836, 1232, 1240, 1247
Hpy166II	GTNNAC	5 cut(s)	14, 128, 1023, 1081, 1159
Hpy188I	TCNGA	4 cut(s)	21, 518, 586, 662
Hpy188III	TCNNGA	5 cut(s)	113, 187, 232, 953, 1001
Hpy8I	GTNNAC	5 cut(s)	14, 128, 1023, 1081, 1159
Hpy99I	CGWCG	2 cut(s)	68, 158
HpyAV	CCTTC	3 cut(s)	584, 657, 857
HpyCH4III	ACNGT	2 cut(s)	209, 1027
HpyCH4IV	ACGT	3 cut(s)	156, 1017, 1083
HpyCH4V	TGCA	5 cut(s)	14, 330, 757, 857, 1244
HpyF10VI	GCNNNNNNNGC	3 cut(s)	351, 398, 1043
HpyF3I	CTNAG	3 cut(s)	73, 380, 1139
HpySE526I	ACGT	3 cut(s)	156, 1017, 1083
Hsp92I	GRCGYC	3 cut(s)	1127, 1209, 1227
Hsp92II	CATG	7 cut(s)	190, 235, 542, 956, 1196, 1204, 1220
HspAI	GCGC	3 cut(s)	1127, 1179, 1227
KasI	GGCGCC	2 cut(s)	1126, 1226
Ksp22I	TGATCA	1 cut(s)	202
KspAI	GTTAAC	1 cut(s)	1023
Kzo9I	GATC	5 cut(s)	202, 513, 561, 610, 657
LmnI	GCTCC	1 cut(s)	21
Lsp1109I	GCAGC	1 cut(s)	769
LweI	GCATC	4 cut(s)	255, 339, 976, 1186
MaeI	CTAG	4 cut(s)	410, 1008, 1170, 1232
MaeII	ACGT	3 cut(s)	156, 1017, 1083
MaeIII	GTNAC	1 cut(s)	887
MalI	GATC	5 cut(s)	204, 515, 563, 612, 659
MbiI	CCGCTC	1 cut(s)	808
MboI	GATC	5 cut(s)	202, 513, 561, 610, 657
MboII	GAAGA	5 cut(s)	310, 313, 620, 727, 1085
MflI	RGATCY	1 cut(s)	610
MhlI	GDGCHC	2 cut(s)	16, 952
Mly113I	GGCGCC	2 cut(s)	1127, 1227
MmeI	TCCRAC	1 cut(s)	112
MroXI	GAANNNNTTC	1 cut(s)	47
MseI	TTAA	4 cut(s)	471, 504, 1022, 1260
MslI	CAYNNNNRTG	2 cut(s)	1218, 1221
MspA1I	CMGCKG	1 cut(s)	528
MspI	CCGG	2 cut(s)	676, 779
MspR9I	CCNGG	3 cut(s)	779, 989, 1013
MvaI	CCWGG	2 cut(s)	989, 1013
MvnI	CGCG	1 cut(s)	443
MwoI	GCNNNNNNNGC	3 cut(s)	351, 398, 1043
NarI	GGCGCC	2 cut(s)	1127, 1227
NciI	CCSGG	1 cut(s)	779
NcoI	CCATGG	1 cut(s)	1200
NdeII	GATC	5 cut(s)	202, 513, 561, 610, 657
NlaIII	CATG	7 cut(s)	190, 235, 542, 956, 1196, 1204, 1220
NlaIV	GGNNCC	7 cut(s)	642, 680, 783, 1069, 1128, 1147, 1228
NspV	TTCGAA	1 cut(s)	713
PaeR7I	CTCGAG	1 cut(s)	1001
PagI	TCATGA	3 cut(s)	186, 231, 952
PaqCI	CACCTGC	2 cut(s)	762, 832
PdmI	GAANNNNTTC	1 cut(s)	47
PfeI	GAWTC	2 cut(s)	860, 984
PflMI	CCANNNNNTGG	1 cut(s)	302
PfoI	TCCNGGA	1 cut(s)	987
PinAI	ACCGGT	1 cut(s)	675
PkrI	GCNGC	4 cut(s)	527, 598, 759, 1048
Ple19I	CGATCG	1 cut(s)	660
PluTI	GGCGCC	2 cut(s)	1130, 1230
Psp6I	CCWGG	2 cut(s)	987, 1011
PspGI	CCWGG	2 cut(s)	987, 1011
PspN4I	GGNNCC	7 cut(s)	642, 680, 783, 1069, 1128, 1147, 1228
PspPI	GGNCC	1 cut(s)	678
PstI	CTGCAG	1 cut(s)	759
PsuI	RGATCY	1 cut(s)	610
PvuI	CGATCG	1 cut(s)	660
RsaI	GTAC	1 cut(s)	211
RsaNI	GTAC	1 cut(s)	210
RseI	CAYNNNNRTG	2 cut(s)	1218, 1221
SaqAI	TTAA	4 cut(s)	471, 504, 1022, 1260
SatI	GCNGC	4 cut(s)	526, 597, 758, 1047
Sau3AI	GATC	5 cut(s)	202, 513, 561, 610, 657
Sau96I	GGNCC	1 cut(s)	678
ScrFI	CCNGG	3 cut(s)	779, 989, 1013
SduI	GDGCHC	2 cut(s)	16, 952
SfaNI	GCATC	4 cut(s)	255, 339, 976, 1186
SfcI	CTRYAG	2 cut(s)	735, 755
SfoI	GGCGCC	2 cut(s)	1128, 1228
Sfr274I	CTCGAG	1 cut(s)	1001
SfuI	TTCGAA	1 cut(s)	713
SinI	GGWCC	1 cut(s)	678
SlaI	CTCGAG	1 cut(s)	1001
SmiMI	CAYNNNNRTG	2 cut(s)	1218, 1221
SmlI	CTYRAG	3 cut(s)	971, 1001, 1038
SmoI	CTYRAG	3 cut(s)	971, 1001, 1038
SsiI	CCGC	8 cut(s)	392, 526, 597, 806, 836, 961, 1047, 1149
SspDI	GGCGCC	2 cut(s)	1126, 1226
SspMI	CTAG	4 cut(s)	410, 1008, 1170, 1232
StyD4I	CCNGG	3 cut(s)	777, 987, 1011
StyI	CCWWGG	3 cut(s)	1169, 1200, 1231
TaaI	ACNGT	2 cut(s)	209, 1027
TaiI	ACGT	3 cut(s)	159, 1020, 1086
TaqI	TCGA	5 cut(s)	153, 567, 671, 713, 1002
TatI	WGTACW	1 cut(s)	209
TauI	GCSGC	3 cut(s)	528, 599, 1049
TfiI	GAWTC	2 cut(s)	860, 984
Tru1I	TTAA	4 cut(s)	471, 504, 1022, 1260
Tru9I	TTAA	4 cut(s)	471, 504, 1022, 1260
TscAI	CASTG	1 cut(s)	598
TseI	GCWGC	1 cut(s)	757
TspDTI	ATGAA	6 cut(s)	40, 220, 248, 461, 476, 555
TspGWI	ACGGA	2 cut(s)	1080, 1144
TspRI	CASTG	1 cut(s)	598
Van91I	CCANNNNNTGG	1 cut(s)	302
VneI	GTGCAC	1 cut(s)	12
VpaK11BI	GGWCC	1 cut(s)	678
XapI	RAATTY	9 cut(s)	47, 103, 227, 464, 473, 519, 579, 616, 789
XcmI	CCANNNNNNNNNTGG	4 cut(s)	303, 566, 1172, 1220
XhoI	CTCGAG	1 cut(s)	1001
XmaJI	CCTAGG	2 cut(s)	1169, 1231
XmiI	GTMKAC	1 cut(s)	127
XmnI	GAANNNNTTC	1 cut(s)	47
XspI	CTAG	4 cut(s)	410, 1008, 1170, 1232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.