FvH4_6g53141

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000188
Physical Location & Seq
Forward (+)
39013290 .. 39016668
3379 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g53141.t2

Sequence Viewer

Length: 1365 bp
ATGGCAAGTGGGAATGATATAGAAAAGGGTCAAGTGAATGGAAGCGATTCAGTTAATGTAGAACGCGGAGGCAGAACTGTTGAACAATTCAAAATCACCTTACACACAAAGCTTTGGAAGGCCGACTCACCTTTGCGTTCTACATGTTGCATCTTCAGAGTCCCCGAGGTGCTACGACGGCAAAAGAAACAAGCATACGAACCTGATATAGTCTCAATCGGACCCCTTCACCGAGGTACTGATGCAAAATTCAAACTTGTGGAAAATGTGAAAGAATGGTATCTAAAATGCCTTCTCTCGCGTCCGACGACAACAATAACCTTGGATAGCCTGATCGAAAGAATGAAGGAACTTGAAATAGAAGCCCGAGGTTGCTATTCAGACCCATGCAATCATCTTGACCAAAACGACTTCATAGAGATGCTCATACTCGACGGTTGTTTCTTGATAGAATTGTTTCGGAAGGCACCTGATGAAAAGAAACAAGATGAGCACGACCCCATTTTCAACGTGTCTTGTATGCTCGAGTATCTACATCATGATCTTCTGTTGCTAGAAAATCAGCTTCCTTGGTTTGTGCTTGAGTTTTTCTATAACCTAATCGAGAGCGATAACCATGAACCCCTCAGTACAGTGGTGATTAACTTCTTCAGAGATTCAGTGGCTGATCCTAGAATTTTAAGCTACCACAAACCCGACACTACTCTTAAGATTCTTCACATTGTTGATCTAATTAGAACTTCCCTCGTTCAGGAACATATAGACGAACTTGAAGACCCAAATGCAGCTACCCCCAAGTTGATATACCACTTGCCACAGAGGATACCTAGTGCTGCTACTCTTTCAGAAGCAGGCGTTAAATTTAGAATAGGTTCGCCAGGTTGCATACTGAACATAACGTTCAAAGACGGCGTTTTCACCATTCCTCCTCTGGCTATCGATGAGAGGACAGATCCTTTGTTCAGGAACCTTATGGCCTACGAGCAGTGTTATCACAGTTGCAAACACAAGATAACATCCTACGCGGTTTTGATGGATAATCTCATCGATACGGCAAAGGACGTGGATCTTCTATGTGAGAAAGAGATAGTAGCCACCTGGTTGAGTTATGATGATGCTTCCAAGTTCTTCAACGATCTATACAATGATACTACAGTCATCAACTTTGTCTACAAGGGACTCTGCAGGAAGGTGGATGTCTATCACAAAGCTAGATGGAACAGGTGGAAAGAGAAAGCAAGACGTGATTATTTTGATACACCATGGTCTGTTATCGCTTTTGCTACAGGTTTTGTCCTCCTCGTCCTCACCTTCTTGCAGACCGTATACACACTCCAGCCGTATTATCATCCTAGGTCTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

455

Amino Acids

52.62

Weight (kDa)

5.79

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 51 - 436 3.2e-111 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 466
AccI GTMKAC 2 cut(s) 1170, 1326
AccII CGCG 3 cut(s) 66, 301, 1025
AciI CCGC 2 cut(s) 66, 1025
AclI AACGTT 1 cut(s) 899
AclWI GGATC 3 cut(s) 662, 947, 1074
AcsI RAATTY 3 cut(s) 248, 675, 860
AcuI CTGAAG 2 cut(s) 139, 634
AfaI GTAC 2 cut(s) 238, 631
AfiI CCNNNNNNNGG 1 cut(s) 751
AflII CTTAAG 1 cut(s) 707
AflIII ACRYGT 2 cut(s) 143, 510
AgsI TTSAA 8 cut(s) 83, 91, 253, 356, 508, 773, 904, 1132
AjiI CACGTC 2 cut(s) 1063, 1244
AjnI CCWGG 2 cut(s) 877, 1097
AluBI AGCT 5 cut(s) 112, 565, 684, 788, 1211
AluI AGCT 5 cut(s) 112, 565, 684, 788, 1211
Alw21I GWGCWC 1 cut(s) 495
Alw26I GTCTC 1 cut(s) 217
AlwI GGATC 3 cut(s) 662, 947, 1074
AlwNI CAGNNNCTG 1 cut(s) 665
Ama87I CYCGRG 3 cut(s) 164, 366, 524
AoxI GGCC 2 cut(s) 120, 975
ApeKI GCWGC 2 cut(s) 785, 833
ApoI RAATTY 3 cut(s) 248, 675, 860
ArsI GACNNNNNNTTYG 2 cut(s) 940, 972
Asp700I GAANNNNTTC 3 cut(s) 46, 456, 871
AspA2I CCTAGG 1 cut(s) 1352
AspS9I GGNCC 1 cut(s) 221
AsuHPI GGTGA 6 cut(s) 88, 120, 221, 649, 910, 1300
AvaI CYCGRG 3 cut(s) 164, 366, 524
AvaII GGWCC 1 cut(s) 221
AvrII CCTAGG 1 cut(s) 1352
BaeI ACNNNNGTAYC 2 cut(s) 1140, 1173
BanI GGYRCC 1 cut(s) 466
BbsI GAAGAC 1 cut(s) 780
Bbv12I GWGCWC 1 cut(s) 495
BbvI GCAGC 2 cut(s) 797, 820
BccI CCATC 2 cut(s) 1027, 1209
BceAI ACGGC 4 cut(s) 194, 925, 1068, 1324
BciT130I CCWGG 2 cut(s) 879, 1099
BciVI GTATCC 1 cut(s) 816
BcoDI GTCTC 1 cut(s) 217
BfaI CTAG 5 cut(s) 554, 672, 828, 1212, 1353
BfmI CTRYAG 3 cut(s) 1152, 1183, 1284
BfrI CTTAAG 1 cut(s) 707
BfuI GTATCC 1 cut(s) 816
BisI GCNGC 2 cut(s) 786, 834
BlnI CCTAGG 1 cut(s) 1352
BlsI GCNGC 2 cut(s) 787, 835
Bme1390I CCNGG 2 cut(s) 879, 1099
Bme18I GGWCC 1 cut(s) 221
BmeT110I CYCGRG 3 cut(s) 164, 366, 524
BmgBI CACGTC 2 cut(s) 1063, 1244
BmgT120I GGNCC 1 cut(s) 221
BmiI GGNNCC 3 cut(s) 223, 468, 968
BmrFI CCNGG 2 cut(s) 879, 1099
BmsI GCATC 4 cut(s) 159, 232, 411, 1105
BpiI GAAGAC 1 cut(s) 780
BpmI CTGGAG 1 cut(s) 1319
BpuEI CTTGAG 1 cut(s) 602
Bsa29I ATCGAT 2 cut(s) 939, 1047
BsaBI GATNNNNATC 1 cut(s) 1200
BsaJI CCNNGG 7 cut(s) 165, 232, 321, 367, 569, 1262, 1352
BsaXI ACNNNNNCTCC 2 cut(s) 910, 940
Bsc4I CCNNNNNNNGG 1 cut(s) 751
Bse8I GATNNNNATC 1 cut(s) 1200
BseBI CCWGG 2 cut(s) 879, 1099
BseCI ATCGAT 2 cut(s) 939, 1047
BseDI CCNNGG 7 cut(s) 165, 232, 321, 367, 569, 1262, 1352
BseGI GGATG 3 cut(s) 1016, 1201, 1348
BseJI GATNNNNATC 1 cut(s) 1200
BseLI CCNNNNNNNGG 1 cut(s) 751
BseMII CTCAG 1 cut(s) 640
BseRI GAGGAG 2 cut(s) 918, 1289
BseXI GCAGC 2 cut(s) 797, 820
Bsh1236I CGCG 3 cut(s) 66, 301, 1025
BshFI GGCC 2 cut(s) 122, 977
BshNI GGYRCC 1 cut(s) 466
BshVI ATCGAT 2 cut(s) 939, 1047
BsiHKAI GWGCWC 1 cut(s) 495
BsiHKCI CYCGRG 3 cut(s) 164, 366, 524
BslFI GGGAC 2 cut(s) 146, 1191
BslI CCNNNNNNNGG 1 cut(s) 751
BsmAI GTCTC 1 cut(s) 217
BsmFI GGGAC 2 cut(s) 146, 1191
BsnI GGCC 2 cut(s) 122, 977
BsoBI CYCGRG 3 cut(s) 164, 366, 524
Bsp1286I GDGCHC 1 cut(s) 495
Bsp143I GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
Bsp19I CCATGG 1 cut(s) 1262
BspACI CCGC 2 cut(s) 66, 1025
BspANI GGCC 2 cut(s) 122, 977
BspCNI CTCAG 1 cut(s) 639
BspDI ATCGAT 2 cut(s) 939, 1047
BspFNI CGCG 3 cut(s) 66, 301, 1025
BspHI TCATGA 1 cut(s) 538
BspLI GGNNCC 3 cut(s) 223, 468, 968
BspMAI CTGCAG 1 cut(s) 1187
BspPI GGATC 3 cut(s) 662, 947, 1074
BspT107I GGYRCC 1 cut(s) 466
BspTI CTTAAG 1 cut(s) 707
BssECI CCNNGG 7 cut(s) 165, 232, 321, 367, 569, 1262, 1352
BssMI GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
BssNAI GTATAC 1 cut(s) 1327
BssT1I CCWWGG 4 cut(s) 321, 569, 1262, 1352
Bst1107I GTATAC 1 cut(s) 1327
Bst2UI CCWGG 2 cut(s) 879, 1099
Bst4CI ACNGT 6 cut(s) 79, 437, 634, 998, 1156, 1324
BstAFI CTTAAG 1 cut(s) 707
BstC8I GCNNGC 1 cut(s) 853
BstDEI CTNAG 1 cut(s) 626
BstDSI CCRYGG 1 cut(s) 1262
BstENI CCTNNNNNAGG 1 cut(s) 749
BstF5I GGATG 3 cut(s) 1016, 1201, 1348
BstFNI CGCG 3 cut(s) 66, 301, 1025
BstKTI GATC 7 cut(s) 336, 544, 670, 730, 955, 1069, 1138
BstMAI GTCTC 1 cut(s) 217
BstMBI GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
BstMWI GCNNNNNNNGC 1 cut(s) 178
BstNI CCWGG 2 cut(s) 879, 1099
BstNSI RCATGY 1 cut(s) 147
BstSCI CCNGG 2 cut(s) 877, 1097
BstSFI CTRYAG 3 cut(s) 1152, 1183, 1284
BstUI CGCG 3 cut(s) 66, 301, 1025
BstV1I GCAGC 2 cut(s) 797, 820
BstV2I GAAGAC 1 cut(s) 780
BstX2I RGATCY 2 cut(s) 952, 1066
BstYI RGATCY 2 cut(s) 952, 1066
BstZ17I GTATAC 1 cut(s) 1327
Bsu15I ATCGAT 2 cut(s) 939, 1047
BsuI GTATCC 1 cut(s) 816
BsuRI GGCC 2 cut(s) 122, 977
BsuTUI ATCGAT 2 cut(s) 939, 1047
BtgI CCRYGG 1 cut(s) 1262
BtrI CACGTC 2 cut(s) 1063, 1244
BtsCI GGATG 3 cut(s) 1016, 1201, 1348
BtsI GCAGTG 1 cut(s) 992
BtsIMutI CAGTG 3 cut(s) 639, 666, 992
Cac8I GCNNGC 1 cut(s) 853
CaiI CAGNNNCTG 1 cut(s) 665
CciI TCATGA 1 cut(s) 538
Cfr13I GGNCC 1 cut(s) 221
ClaI ATCGAT 2 cut(s) 939, 1047
CseI GACGC 1 cut(s) 290
CsiI ACCWGGT 1 cut(s) 1097
Csp6I GTAC 2 cut(s) 237, 630
CspCI CAANNNNNGTGG 2 cut(s) 1044, 1079
CviAII CATG 5 cut(s) 144, 387, 539, 617, 1263
CviQI GTAC 2 cut(s) 237, 630
DdeI CTNAG 1 cut(s) 626
DpnI GATC 7 cut(s) 335, 543, 669, 729, 954, 1068, 1137
DpnII GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
Eco130I CCWWGG 4 cut(s) 321, 569, 1262, 1352
Eco47I GGWCC 1 cut(s) 221
Eco57I CTGAAG 2 cut(s) 139, 634
Eco88I CYCGRG 3 cut(s) 164, 366, 524
EcoNI CCTNNNNNAGG 1 cut(s) 749
EcoRII CCWGG 2 cut(s) 877, 1097
EcoT14I CCWWGG 4 cut(s) 321, 569, 1262, 1352
ErhI CCWWGG 4 cut(s) 321, 569, 1262, 1352
FaeI CATG 5 cut(s) 147, 390, 542, 620, 1266
FaqI GGGAC 2 cut(s) 146, 1191
FatI CATG 5 cut(s) 143, 386, 538, 616, 1262
FblI GTMKAC 2 cut(s) 1170, 1326
Fnu4HI GCNGC 2 cut(s) 786, 834
FokI GGATG 3 cut(s) 1003, 1208, 1335
Fsp4HI GCNGC 2 cut(s) 786, 834
FspBI CTAG 5 cut(s) 554, 672, 828, 1212, 1353
GluI GCNGC 2 cut(s) 786, 834
GsuI CTGGAG 1 cut(s) 1319
HaeIII GGCC 2 cut(s) 122, 977
HgaI GACGC 1 cut(s) 290
Hin1II CATG 5 cut(s) 147, 390, 542, 620, 1266
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 6 cut(s) 47, 125, 159, 656, 712, 1179
HphI GGTGA 6 cut(s) 88, 120, 221, 649, 910, 1300
Hpy166II GTNNAC 2 cut(s) 1171, 1327
Hpy188I TCNGA 7 cut(s) 158, 221, 306, 382, 462, 653, 847
Hpy188III TCNNGA 6 cut(s) 398, 445, 539, 604, 752, 964
Hpy8I GTNNAC 2 cut(s) 1171, 1327
Hpy99I CGWCG 3 cut(s) 180, 310, 437
HpyAV CCTTC 7 cut(s) 112, 236, 302, 340, 457, 1183, 1321
HpyCH4III ACNGT 6 cut(s) 79, 437, 634, 998, 1156, 1324
HpyCH4IV ACGT 4 cut(s) 510, 899, 1062, 1243
HpyCH4V TGCA 8 cut(s) 150, 245, 390, 785, 885, 1002, 1185, 1318
HpyF10VI GCNNNNNNNGC 1 cut(s) 178
HpyF3I CTNAG 1 cut(s) 626
HpySE526I ACGT 4 cut(s) 510, 899, 1062, 1243
Hsp92II CATG 5 cut(s) 147, 390, 542, 620, 1266
Kzo9I GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
Lsp1109I GCAGC 2 cut(s) 797, 820
LweI GCATC 4 cut(s) 159, 232, 411, 1105
MabI ACCWGGT 1 cut(s) 1097
MaeI CTAG 5 cut(s) 554, 672, 828, 1212, 1353
MaeII ACGT 4 cut(s) 510, 899, 1062, 1243
MalI GATC 7 cut(s) 335, 543, 669, 729, 954, 1068, 1137
MboI GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
MboII GAAGA 7 cut(s) 145, 536, 640, 707, 785, 1061, 1120
MflI RGATCY 2 cut(s) 952, 1066
MhlI GDGCHC 1 cut(s) 495
MluCI AATT 7 cut(s) 86, 248, 452, 675, 732, 860, 1360
MlyI GAGTC 3 cut(s) 119, 168, 1173
MmeI TCCRAC 1 cut(s) 329
MroXI GAANNNNTTC 3 cut(s) 46, 456, 871
MseI TTAA 6 cut(s) 54, 642, 680, 708, 858, 1363
MslI CAYNNNNRTG 1 cut(s) 419
MspCI CTTAAG 1 cut(s) 707
MspR9I CCNGG 2 cut(s) 879, 1099
MvaI CCWGG 2 cut(s) 879, 1099
MvnI CGCG 3 cut(s) 66, 301, 1025
MwoI GCNNNNNNNGC 1 cut(s) 178
NcoI CCATGG 1 cut(s) 1262
NdeII GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
NlaIII CATG 5 cut(s) 147, 390, 542, 620, 1266
NlaIV GGNNCC 3 cut(s) 223, 468, 968
NspI RCATGY 1 cut(s) 147
PaeR7I CTCGAG 1 cut(s) 524
PagI TCATGA 1 cut(s) 538
PciI ACATGT 1 cut(s) 143
PcsI WCGNNNNNNNCGW 1 cut(s) 305
PdmI GAANNNNTTC 3 cut(s) 46, 456, 871
PfeI GAWTC 3 cut(s) 47, 656, 712
PkrI GCNGC 2 cut(s) 787, 835
PleI GAGTC 3 cut(s) 119, 167, 1173
PpsI GAGTC 3 cut(s) 119, 167, 1173
PscI ACATGT 1 cut(s) 143
Psp1406I AACGTT 1 cut(s) 899
Psp6I CCWGG 2 cut(s) 877, 1097
PspGI CCWGG 2 cut(s) 877, 1097
PspN4I GGNNCC 3 cut(s) 223, 468, 968
PspPI GGNCC 1 cut(s) 221
PspXI VCTCGAGB 1 cut(s) 524
PstI CTGCAG 1 cut(s) 1187
PstNI CAGNNNCTG 1 cut(s) 665
PsuI RGATCY 2 cut(s) 952, 1066
RsaI GTAC 2 cut(s) 238, 631
RsaNI GTAC 2 cut(s) 237, 630
RseI CAYNNNNRTG 1 cut(s) 419
SaqAI TTAA 6 cut(s) 54, 642, 680, 708, 858, 1363
SatI GCNGC 2 cut(s) 786, 834
Sau3AI GATC 7 cut(s) 333, 541, 667, 727, 952, 1066, 1135
Sau96I GGNCC 1 cut(s) 221
SchI GAGTC 3 cut(s) 119, 168, 1173
ScrFI CCNGG 2 cut(s) 879, 1099
SduI GDGCHC 1 cut(s) 495
SexAI ACCWGGT 1 cut(s) 1097
SfaNI GCATC 4 cut(s) 159, 232, 411, 1105
SfcI CTRYAG 3 cut(s) 1152, 1183, 1284
Sfr274I CTCGAG 1 cut(s) 524
SinI GGWCC 1 cut(s) 221
SlaI CTCGAG 1 cut(s) 524
SmiMI CAYNNNNRTG 1 cut(s) 419
SmlI CTYRAG 3 cut(s) 524, 581, 707
SmoI CTYRAG 3 cut(s) 524, 581, 707
Sse9I AATT 7 cut(s) 86, 248, 452, 675, 732, 860, 1360
SsiI CCGC 2 cut(s) 66, 1025
SspMI CTAG 5 cut(s) 554, 672, 828, 1212, 1353
StyD4I CCNGG 2 cut(s) 877, 1097
StyI CCWWGG 4 cut(s) 321, 569, 1262, 1352
TaaI ACNGT 6 cut(s) 79, 437, 634, 998, 1156, 1324
TaiI ACGT 4 cut(s) 513, 902, 1065, 1246
TaqI TCGA 6 cut(s) 336, 432, 525, 603, 939, 1047
TasI AATT 7 cut(s) 86, 248, 452, 675, 732, 860, 1360
TatI WGTACW 1 cut(s) 629
TfiI GAWTC 3 cut(s) 47, 656, 712
Tru1I TTAA 6 cut(s) 54, 642, 680, 708, 858, 1363
Tru9I TTAA 6 cut(s) 54, 642, 680, 708, 858, 1363
TscAI CASTG 3 cut(s) 639, 666, 992
TseI GCWGC 2 cut(s) 785, 833
TspDTI ATGAA 4 cut(s) 359, 403, 489, 633
TspRI CASTG 3 cut(s) 639, 666, 992
Vha464I CTTAAG 1 cut(s) 707
VpaK11BI GGWCC 1 cut(s) 221
XagI CCTNNNNNAGG 1 cut(s) 749
XapI RAATTY 3 cut(s) 248, 675, 860
XceI RCATGY 1 cut(s) 147
XcmI CCANNNNNNNNNTGG 1 cut(s) 928
XhoI CTCGAG 1 cut(s) 524
XmaJI CCTAGG 1 cut(s) 1352
XmiI GTMKAC 2 cut(s) 1170, 1326
XmnI GAANNNNTTC 3 cut(s) 46, 456, 871
XspI CTAG 5 cut(s) 554, 672, 828, 1212, 1353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.