Rmu_sc0000861.1_g000057

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000861.1
OG0000188
Physical Location & Seq
Reverse (-)
245458 .. 246825
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000861.1_g000057.1.cds

Sequence Viewer

Length: 1368 bp
atgggtagcagtgatatagaaaagggtaaagcggatgaaagcgtttcgattcatcaagaccggagaggtatgactattgaacaatggaaatgcatcttcaattctgagcttttggaggccaaatcacctgtgcctttttcatgttgcatcttcaaagttcctgaggtgctacgaagacaaaaaaaggaggcatacgaacctgacatagtctcaatcggcccctttcaccgaggtgttgataaatttcaactcatggaaaatttgaaaaaatggtatttgagctgtcttttcttgccccagcgccagacagtattgaacatggatagcttgattgaaagcatcaagggacaggaaaaaagtgcccggggttattattcagacccatgctatcatcttgaccaaaacgacttcatagagatgctcatactcgatggttgtttcttaatagaattatttcggaaggcaccttctaagcatgcaaaagctcgacaagatgaagacgaccctatcttcaacatgccttgtatgctcgaatacctgtaccatgatcttttgttgctagaaaatcaactaccttggtttgtgcttgagtctatctataaactaattgagggtggtagccctataaaacccctcagtcaagtagtaatagacttcttcaaagattcagtggctgaagctgaaatttttagctatcccgatcccaagtctcctaagcaacctgagattcttcacatacttgatctgataagaacttccctcgttcaggaacatgcagaccaaaaggagacccccgcatcaaagttggtaaaccacttgccacagaggatacctagtgctgctgctcttttagaggcgggggttaaatttagaaagggcgactcaggttgcatattgaacataacgttcaatggtggcattttcaccattcctcctctggctatcgatgaaaggacaggtcctatgttcaggaaccttatggcctacgaacagtgtaatggcagttgcaagcacatgataacatcctacgcggttttgatggataacctcatcgatacgaacaaggatgtggatcttctatgtgaaaaacatatactagccaactggttgagtgccgatgatgcttcgaagttcttcaacgatctatacaatgacaccacagtcattgactatgtctacaagggactttgcgataaagtgcattcatatcgcaaagtaccatggcacaagtggagaaagaaattgaaacgtgattattttgaaacaccatggtctactatctcttttattgcagcttttgtcctcctggtccttaccttcttgcagaccatatacacactccaacagtactatcatccccgctcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

455

Amino Acids

52.55

Weight (kDa)

6.04

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1160
AccB1I GGYRCC 1 cut(s) 463
AccBSI CCGCTC 1 cut(s) 1362
AccI GTMKAC 2 cut(s) 1176, 1274
AccII CGCG 1 cut(s) 1031
AciI CCGC 5 cut(s) 32, 795, 857, 1031, 1360
AclI AACGTT 1 cut(s) 905
AclWI GGATC 2 cut(s) 695, 1080
AcsI RAATTY 4 cut(s) 242, 259, 684, 866
AcuI CTGAAG 1 cut(s) 696
AfaI GTAC 3 cut(s) 542, 1218, 1349
AfiI CCNNNNNNNGG 1 cut(s) 766
AjnI CCWGG 1 cut(s) 1305
AleI CACNNNNGTG 1 cut(s) 231
AluBI AGCT 7 cut(s) 109, 282, 327, 485, 680, 693, 1295
AluI AGCT 7 cut(s) 109, 282, 327, 485, 680, 693, 1295
Alw26I GTCTC 3 cut(s) 214, 714, 782
AlwI GGATC 2 cut(s) 695, 1080
AlwNI CAGNNNCTG 1 cut(s) 674
Ama87I CYCGRG 1 cut(s) 363
AoxI GGCC 3 cut(s) 117, 217, 981
ApeKI GCWGC 3 cut(s) 839, 842, 1292
ApoI RAATTY 4 cut(s) 242, 259, 684, 866
Asp700I GAANNNNTTC 2 cut(s) 453, 1133
AspLEI GCGC 1 cut(s) 303
AspS9I GGNCC 3 cut(s) 218, 959, 1309
AsuC2I CCSGG 2 cut(s) 364, 365
AsuHPI GGTGA 3 cut(s) 117, 218, 916
AsuII TTCGAA 1 cut(s) 1127
AvaI CYCGRG 1 cut(s) 363
AvaII GGWCC 2 cut(s) 959, 1309
AxyI CCTNAGG 1 cut(s) 162
BaeGI GKGCMC 1 cut(s) 364
BanI GGYRCC 1 cut(s) 463
BbsI GAAGAC 2 cut(s) 181, 504
BbvI GCAGC 3 cut(s) 826, 829, 1304
BccI CCATC 2 cut(s) 425, 1033
BcgI CGANNNNNNTGC 2 cut(s) 1190, 1224
BciT130I CCWGG 1 cut(s) 1307
BciVI GTATCC 1 cut(s) 822
BcnI CCSGG 2 cut(s) 364, 365
BcoDI GTCTC 3 cut(s) 214, 714, 782
BfaI CTAG 3 cut(s) 560, 834, 1097
BfoI RGCGCY 1 cut(s) 304
BfuI GTATCC 1 cut(s) 822
BisI GCNGC 3 cut(s) 840, 843, 1293
BlsI GCNGC 3 cut(s) 841, 844, 1294
BmcAI AGTACT 1 cut(s) 1349
Bme1390I CCNGG 3 cut(s) 364, 365, 1307
Bme18I GGWCC 2 cut(s) 959, 1309
BmeT110I CYCGRG 1 cut(s) 363
BmgT120I GGNCC 3 cut(s) 218, 959, 1309
BmiI GGNNCC 3 cut(s) 220, 465, 974
BmrFI CCNGG 3 cut(s) 364, 365, 1307
BmsI GCATC 6 cut(s) 102, 156, 348, 408, 806, 1111
BpiI GAAGAC 2 cut(s) 181, 504
Bpu10I CCTNAGC 1 cut(s) 714
Bpu14I TTCGAA 1 cut(s) 1127
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 2 cut(s) 364, 365
Bsa29I ATCGAT 2 cut(s) 945, 1053
BsaBI GATNNNNATC 1 cut(s) 1071
BsaI GGTCTC 1 cut(s) 782
BsaJI CCNNGG 6 cut(s) 229, 363, 364, 575, 1220, 1268
BsaWI WCCGGW 1 cut(s) 60
BsaXI ACNNNNNCTCC 2 cut(s) 916, 946
Bsc4I CCNNNNNNNGG 1 cut(s) 766
Bse1I ACTGG 1 cut(s) 1109
Bse21I CCTNAGG 1 cut(s) 162
Bse8I GATNNNNATC 1 cut(s) 1071
BseBI CCWGG 1 cut(s) 1307
BseCI ATCGAT 2 cut(s) 945, 1053
BseDI CCNNGG 6 cut(s) 229, 363, 364, 575, 1220, 1268
BseGI GGATG 4 cut(s) 40, 1022, 1072, 1354
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 1 cut(s) 766
BseMII CTCAG 5 cut(s) 96, 153, 649, 714, 897
BseNI ACTGG 1 cut(s) 1109
BseRI GAGGAG 1 cut(s) 924
BseSI GKGCMC 1 cut(s) 364
BseXI GCAGC 3 cut(s) 826, 829, 1304
BseYI CCCAGC 1 cut(s) 297
Bsh1236I CGCG 1 cut(s) 1031
BshFI GGCC 3 cut(s) 119, 219, 983
BshNI GGYRCC 1 cut(s) 463
BshVI ATCGAT 2 cut(s) 945, 1053
BsiHKCI CYCGRG 1 cut(s) 363
BsiSI CCGG 2 cut(s) 61, 364
BslFI GGGAC 2 cut(s) 360, 1197
BslI CCNNNNNNNGG 1 cut(s) 766
BsmAI GTCTC 3 cut(s) 214, 714, 782
BsmFI GGGAC 2 cut(s) 360, 1197
BsmI GAATGC 1 cut(s) 1201
BsnI GGCC 3 cut(s) 119, 219, 983
Bso31I GGTCTC 1 cut(s) 782
BsoBI CYCGRG 1 cut(s) 363
Bsp119I TTCGAA 1 cut(s) 1127
Bsp1286I GDGCHC 1 cut(s) 364
Bsp143I GATC 5 cut(s) 547, 700, 742, 1072, 1141
Bsp19I CCATGG 2 cut(s) 1220, 1268
BspACI CCGC 5 cut(s) 32, 795, 857, 1031, 1360
BspANI GGCC 3 cut(s) 119, 219, 983
BspCNI CTCAG 5 cut(s) 97, 154, 648, 715, 896
BspDI ATCGAT 2 cut(s) 945, 1053
BspFNI CGCG 1 cut(s) 1031
BspHI TCATGA 1 cut(s) 1364
BspLI GGNNCC 3 cut(s) 220, 465, 974
BspPI GGATC 2 cut(s) 695, 1080
BspT104I TTCGAA 1 cut(s) 1127
BspT107I GGYRCC 1 cut(s) 463
BspTNI GGTCTC 1 cut(s) 782
BsrBI CCGCTC 1 cut(s) 1362
BsrI ACTGG 1 cut(s) 1109
BssECI CCNNGG 6 cut(s) 229, 363, 364, 575, 1220, 1268
BssMI GATC 5 cut(s) 547, 700, 742, 1072, 1141
BssT1I CCWWGG 3 cut(s) 575, 1220, 1268
Bst2UI CCWGG 1 cut(s) 1307
Bst4CI ACNGT 4 cut(s) 310, 993, 1162, 1347
BstBI TTCGAA 1 cut(s) 1127
BstC8I GCNNGC 2 cut(s) 477, 1010
BstDEI CTNAG 7 cut(s) 105, 162, 471, 635, 714, 723, 883
BstDSI CCRYGG 2 cut(s) 1220, 1268
BstENI CCTNNNNNAGG 1 cut(s) 764
BstF5I GGATG 4 cut(s) 40, 1022, 1072, 1354
BstFNI CGCG 1 cut(s) 1031
BstH2I RGCGCY 1 cut(s) 304
BstHHI GCGC 1 cut(s) 303
BstKTI GATC 5 cut(s) 550, 703, 745, 1075, 1144
BstMAI GTCTC 3 cut(s) 214, 714, 782
BstMBI GATC 5 cut(s) 547, 700, 742, 1072, 1141
BstMWI GCNNNNNNNGC 2 cut(s) 526, 1121
BstNI CCWGG 1 cut(s) 1307
BstNSI RCATGY 3 cut(s) 479, 520, 776
BstSCI CCNGG 3 cut(s) 362, 363, 1305
BstSLI GKGCMC 1 cut(s) 364
BstUI CGCG 1 cut(s) 1031
BstV1I GCAGC 3 cut(s) 826, 829, 1304
BstV2I GAAGAC 2 cut(s) 181, 504
BstX2I RGATCY 1 cut(s) 1072
BstYI RGATCY 1 cut(s) 1072
Bsu15I ATCGAT 2 cut(s) 945, 1053
Bsu36I CCTNAGG 1 cut(s) 162
BsuI GTATCC 1 cut(s) 822
BsuRI GGCC 3 cut(s) 119, 219, 983
BsuTUI ATCGAT 2 cut(s) 945, 1053
BtgI CCRYGG 2 cut(s) 1220, 1268
BtsCI GGATG 4 cut(s) 40, 1022, 1072, 1354
BtsI GCAGTG 1 cut(s) 16
BtsIMutI CAGTG 3 cut(s) 16, 675, 998
Cac8I GCNNGC 2 cut(s) 477, 1010
CaiI CAGNNNCTG 1 cut(s) 674
CciI TCATGA 1 cut(s) 1364
CfoI GCGC 1 cut(s) 303
Cfr13I GGNCC 3 cut(s) 218, 959, 1309
Cfr9I CCCGGG 1 cut(s) 363
ClaI ATCGAT 2 cut(s) 945, 1053
Csp6I GTAC 3 cut(s) 541, 1217, 1348
CspCI CAANNNNNGTGG 2 cut(s) 1147, 1182
CviQI GTAC 3 cut(s) 541, 1217, 1348
DdeI CTNAG 7 cut(s) 105, 162, 471, 635, 714, 723, 883
DpnI GATC 5 cut(s) 549, 702, 744, 1074, 1143
DpnII GATC 5 cut(s) 547, 700, 742, 1072, 1141
DrdI GACNNNNNNGTC 1 cut(s) 1160
DseDI GACNNNNNNGTC 1 cut(s) 1160
Eco130I CCWWGG 3 cut(s) 575, 1220, 1268
Eco31I GGTCTC 1 cut(s) 782
Eco47I GGWCC 2 cut(s) 959, 1309
Eco57I CTGAAG 1 cut(s) 696
Eco81I CCTNAGG 1 cut(s) 162
Eco88I CYCGRG 1 cut(s) 363
EcoNI CCTNNNNNAGG 1 cut(s) 764
EcoO109I RGGNCCY 1 cut(s) 959
EcoRII CCWGG 1 cut(s) 1305
EcoT14I CCWWGG 3 cut(s) 575, 1220, 1268
EcoT22I ATGCAT 1 cut(s) 95
ErhI CCWWGG 3 cut(s) 575, 1220, 1268
FaqI GGGAC 2 cut(s) 360, 1197
FauI CCCGC 2 cut(s) 802, 850
FblI GTMKAC 2 cut(s) 1176, 1274
Fnu4HI GCNGC 3 cut(s) 840, 843, 1293
FokI GGATG 4 cut(s) 47, 1009, 1079, 1341
Fsp4HI GCNGC 3 cut(s) 840, 843, 1293
FspBI CTAG 3 cut(s) 560, 834, 1097
GlaI GCGC 1 cut(s) 302
GluI GCNGC 3 cut(s) 840, 843, 1293
GsaI CCCAGC 1 cut(s) 301
HaeII RGCGCY 1 cut(s) 304
HaeIII GGCC 3 cut(s) 119, 219, 983
HapII CCGG 2 cut(s) 61, 364
HhaI GCGC 1 cut(s) 303
Hin6I GCGC 1 cut(s) 301
HinP1I GCGC 1 cut(s) 301
HinfI GANTC 5 cut(s) 49, 590, 665, 727, 881
HpaII CCGG 2 cut(s) 61, 364
HphI GGTGA 3 cut(s) 117, 218, 916
Hpy166II GTNNAC 3 cut(s) 811, 1177, 1275
Hpy188I TCNGA 4 cut(s) 106, 379, 459, 747
Hpy188III TCNNGA 7 cut(s) 56, 161, 395, 698, 767, 970, 1365
Hpy8I GTNNAC 3 cut(s) 811, 1177, 1275
HpyAV CCTTC 3 cut(s) 454, 477, 1327
HpyCH4III ACNGT 4 cut(s) 310, 993, 1162, 1347
HpyCH4IV ACGT 2 cut(s) 905, 1249
HpyCH4V TGCA 9 cut(s) 93, 147, 479, 776, 891, 1008, 1201, 1292, 1324
HpyF10VI GCNNNNNNNGC 2 cut(s) 526, 1121
HpyF3I CTNAG 7 cut(s) 105, 162, 471, 635, 714, 723, 883
HpySE526I ACGT 2 cut(s) 905, 1249
HspAI GCGC 1 cut(s) 301
Kzo9I GATC 5 cut(s) 547, 700, 742, 1072, 1141
Lsp1109I GCAGC 3 cut(s) 826, 829, 1304
LweI GCATC 6 cut(s) 102, 156, 348, 408, 806, 1111
MaeI CTAG 3 cut(s) 560, 834, 1097
MaeII ACGT 2 cut(s) 905, 1249
MalI GATC 5 cut(s) 549, 702, 744, 1074, 1143
MbiI CCGCTC 1 cut(s) 1362
MboI GATC 5 cut(s) 547, 700, 742, 1072, 1141
MboII GAAGA 9 cut(s) 88, 142, 186, 502, 509, 649, 722, 1067, 1126
MflI RGATCY 1 cut(s) 1072
MhlI GDGCHC 1 cut(s) 364
MluCI AATT 8 cut(s) 100, 242, 259, 449, 606, 684, 866, 1241
MlyI GAGTC 2 cut(s) 599, 875
MmeI TCCRAC 1 cut(s) 1366
Mph1103I ATGCAT 1 cut(s) 95
MroXI GAANNNNTTC 2 cut(s) 453, 1133
MseI TTAA 2 cut(s) 443, 864
MslI CAYNNNNRTG 2 cut(s) 231, 416
MspI CCGG 2 cut(s) 61, 364
MspR9I CCNGG 3 cut(s) 364, 365, 1307
Mva1269I GAATGC 1 cut(s) 1201
MvaI CCWGG 1 cut(s) 1307
MvnI CGCG 1 cut(s) 1031
MwoI GCNNNNNNNGC 2 cut(s) 526, 1121
NciI CCSGG 2 cut(s) 364, 365
NcoI CCATGG 2 cut(s) 1220, 1268
NdeII GATC 5 cut(s) 547, 700, 742, 1072, 1141
NlaIV GGNNCC 3 cut(s) 220, 465, 974
NsiI ATGCAT 1 cut(s) 95
NspI RCATGY 3 cut(s) 479, 520, 776
NspV TTCGAA 1 cut(s) 1127
OliI CACNNNNGTG 1 cut(s) 231
PaeI GCATGC 1 cut(s) 479
PagI TCATGA 1 cut(s) 1364
PctI GAATGC 1 cut(s) 1201
PdmI GAANNNNTTC 2 cut(s) 453, 1133
PfeI GAWTC 3 cut(s) 49, 665, 727
PflFI GACNNNGTC 2 cut(s) 206, 1172
PkrI GCNGC 3 cut(s) 841, 844, 1294
PleI GAGTC 2 cut(s) 598, 875
PpsI GAGTC 2 cut(s) 598, 875
PpuMI RGGWCCY 1 cut(s) 959
Psp1406I AACGTT 1 cut(s) 905
Psp5II RGGWCCY 1 cut(s) 959
Psp6I CCWGG 1 cut(s) 1305
PspFI CCCAGC 1 cut(s) 297
PspGI CCWGG 1 cut(s) 1305
PspN4I GGNNCC 3 cut(s) 220, 465, 974
PspPI GGNCC 3 cut(s) 218, 959, 1309
PspPPI RGGWCCY 1 cut(s) 959
PstNI CAGNNNCTG 1 cut(s) 674
PsuI RGATCY 1 cut(s) 1072
PsyI GACNNNGTC 2 cut(s) 206, 1172
RsaI GTAC 3 cut(s) 542, 1218, 1349
RsaNI GTAC 3 cut(s) 541, 1217, 1348
RseI CAYNNNNRTG 2 cut(s) 231, 416
SaqAI TTAA 2 cut(s) 443, 864
SatI GCNGC 3 cut(s) 840, 843, 1293
Sau3AI GATC 5 cut(s) 547, 700, 742, 1072, 1141
Sau96I GGNCC 3 cut(s) 218, 959, 1309
ScaI AGTACT 1 cut(s) 1349
SchI GAGTC 2 cut(s) 599, 875
ScrFI CCNGG 3 cut(s) 364, 365, 1307
SduI GDGCHC 1 cut(s) 364
SfaNI GCATC 6 cut(s) 102, 156, 348, 408, 806, 1111
SfuI TTCGAA 1 cut(s) 1127
SinI GGWCC 2 cut(s) 959, 1309
SmaI CCCGGG 1 cut(s) 365
SmiMI CAYNNNNRTG 2 cut(s) 231, 416
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
SphI GCATGC 1 cut(s) 479
Sse9I AATT 8 cut(s) 100, 242, 259, 449, 606, 684, 866, 1241
SsiI CCGC 5 cut(s) 32, 795, 857, 1031, 1360
SspMI CTAG 3 cut(s) 560, 834, 1097
StyD4I CCNGG 3 cut(s) 362, 363, 1305
StyI CCWWGG 3 cut(s) 575, 1220, 1268
TaaI ACNGT 4 cut(s) 310, 993, 1162, 1347
TaiI ACGT 2 cut(s) 908, 1252
TaqI TCGA 7 cut(s) 47, 429, 487, 531, 945, 1053, 1127
TasI AATT 8 cut(s) 100, 242, 259, 449, 606, 684, 866, 1241
TatI WGTACW 1 cut(s) 1347
TfiI GAWTC 3 cut(s) 49, 665, 727
Tru1I TTAA 2 cut(s) 443, 864
Tru9I TTAA 2 cut(s) 443, 864
TscAI CASTG 3 cut(s) 16, 675, 998
TseI GCWGC 3 cut(s) 839, 842, 1292
TspDTI ATGAA 7 cut(s) 41, 51, 129, 400, 510, 963, 1194
TspMI CCCGGG 1 cut(s) 363
TspRI CASTG 3 cut(s) 16, 675, 998
Tth111I GACNNNGTC 2 cut(s) 206, 1172
VpaK11BI GGWCC 2 cut(s) 959, 1309
XagI CCTNNNNNAGG 1 cut(s) 764
XapI RAATTY 4 cut(s) 242, 259, 684, 866
XceI RCATGY 3 cut(s) 479, 520, 776
XcmI CCANNNNNNNNNTGG 2 cut(s) 934, 1227
XmaI CCCGGG 1 cut(s) 363
XmiI GTMKAC 2 cut(s) 1176, 1274
XmnI GAANNNNTTC 2 cut(s) 453, 1133
XspI CTAG 3 cut(s) 560, 834, 1097
ZrmI AGTACT 1 cut(s) 1349
Zsp2I ATGCAT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.