MD08G1225700.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000188
Physical Location & Seq
Reverse (-)
29256080 .. 29257421
1342 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1225700.v1.1.491

Sequence Viewer

Length: 1284 bp
ATGGACATAGACATTTTACTTGAAGCGTCGAAGAACACCTCGACGCCAAAGCTTCCCAGGTGCATCTTCAGAGTTCCTGAAGTTCTCCGCAGACATAACGTACTGGCATACGCACCTGACATTATCTCAATCGGGCCCTATCATCCACGAGACAATGTACAATTTCAAGCTATGGAAAATCTGAAATACGAGTATTTGCGCGACCTTCTCTTACACATGGATAGGTCACACGACAGGGATATGGAGTTAGAAGCATCGATCAATAAACTCGTCAATTACATTTTAGATCACAAGAAACTACAAGCCATGTCTGAGTTTGAGAAAAAAGCTCGTGATTTTTATGCACATCCATTTGATCCTCCGATGAAAATGGAGTTTCTCCACATGATGATACTTGATGGTTGCTTCCTAGTACAAATATTTAGGAAGTTTGTGTATAAGGAACAGAGGGACATTAATGACCCTTTATTCAACATGGATTGCATGTTCCAGTACATATGCCATGACCTCTTGCTCTTAGAAAATCAGATTCCTTGGTTTGTCCTCCAGGACGTATATGAGCTCACCGTCAAGTATTACCAGAACCCTGAGCCCTGCCTCTCGGTGCTCATCCTCACCGCGCTCAGCTCACAACCACAACTGTCCCATAACTGCCGGTGGTATCTGGATCATCTAAGAGAAAATAATTACAAAGAGGATGAAAGTGTGGTCCACATTCTCGATCTCATAAGAACTTCCATAGTTTTCTCCTTCACTGAACGCTACGAGAAACCTTTCCACGATGCAAAGGTACAACTGATAGCTTCAGCAACTGCTCTTTCTGAGGCCGGCATTAGATTCAAAATGAGCTCCGATAAATGTAAAAGCATAATGAACATAGAATGCGAGAATGGGGTTATTATGATTCCGCATCTAGAAATTGGAGAGTTAACTGAATCGATATTCAGGAACCTGATCGCCTTGGAGCAATGCTGTTATGGTCGTTCGCACAAAATCACATCTTATGCCGTTCTGATGGATAACCTCCTCGGTTCTAGCAACGATATAAAATTTCTCTGCGACAAGGGAATTATACGTAACTGGCTGAGCGCTGAAAATGGTTCTGAGTTCTTCAGCAAGCTTTACTGCGACACGCATCGAGGAAGTGGCGAAAAAACATTGAAGCGTAACTATTGTTCAGATCCATGGAAAGCCACCTCCTGGATTGTAGCAACTATCCTTCTGATTCTCACCGCATTGCAGACTGCATACGCCATTACGCAATACTATTCTCCTCCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

428

Amino Acids

49.84

Weight (kDa)

5.94

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 22 - 410 7.8e-86 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1200
AccII CGCG 2 cut(s) 201, 620
AciI CCGC 4 cut(s) 88, 618, 908, 1233
AclWI GGATC 3 cut(s) 350, 675, 1175
AcsI RAATTY 1 cut(s) 1049
AcuI CTGAAG 4 cut(s) 52, 99, 789, 1096
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 5 cut(s) 102, 159, 414, 494, 792
AfeI AGCGCT 1 cut(s) 1090
AfiI CCNNNNNNNGG 1 cut(s) 1200
AgsI TTSAA 5 cut(s) 23, 167, 472, 841, 1162
AjnI CCWGG 3 cut(s) 56, 546, 1199
AloI GAACNNNNNNTCC 2 cut(s) 470, 502
AluBI AGCT 8 cut(s) 52, 170, 329, 562, 627, 803, 849, 1120
AluI AGCT 8 cut(s) 52, 170, 329, 562, 627, 803, 849, 1120
Alw21I GWGCWC 3 cut(s) 564, 609, 851
Alw26I GTCTC 1 cut(s) 144
AlwI GGATC 3 cut(s) 350, 675, 1175
AlwNI CAGNNNCTG 1 cut(s) 812
Aor51HI AGCGCT 1 cut(s) 1090
AoxI GGCC 2 cut(s) 134, 825
ApaI GGGCCC 1 cut(s) 138
ApoI RAATTY 1 cut(s) 1049
AseI ATTAAT 1 cut(s) 456
Asp700I GAANNNNTTC 1 cut(s) 773
AspLEI GCGC 3 cut(s) 201, 622, 1091
AspS9I GGNCC 3 cut(s) 134, 135, 709
AsuHPI GGTGA 3 cut(s) 556, 607, 1222
AvaII GGWCC 1 cut(s) 709
BaeGI GKGCMC 1 cut(s) 138
BanII GRGCYC 4 cut(s) 138, 564, 594, 851
BauI CACGAG 2 cut(s) 147, 330
Bbv12I GWGCWC 3 cut(s) 564, 609, 851
BccI CCATC 2 cut(s) 392, 1009
BceAI ACGGC 1 cut(s) 992
BciT130I CCWGG 3 cut(s) 58, 548, 1201
BcoDI GTCTC 1 cut(s) 144
BfaI CTAG 3 cut(s) 410, 914, 1035
BfoI RGCGCY 1 cut(s) 1092
BlpI GCTNAGC 2 cut(s) 623, 1085
Bme1390I CCNGG 3 cut(s) 58, 548, 1201
Bme18I GGWCC 1 cut(s) 709
BmgT120I GGNCC 3 cut(s) 134, 135, 709
BmiI GGNNCC 2 cut(s) 136, 950
BmrFI CCNGG 3 cut(s) 58, 548, 1201
BmsI GCATC 5 cut(s) 72, 263, 772, 919, 1144
BpmI CTGGAG 2 cut(s) 530, 1260
Bpu10I CCTNAGC 1 cut(s) 588
Bpu1102I GCTNAGC 2 cut(s) 623, 1085
Bsa29I ATCGAT 2 cut(s) 257, 938
BsaAI YACGTR 1 cut(s) 1076
BsaHI GRCGYC 1 cut(s) 44
BsaJI CCNNGG 5 cut(s) 56, 533, 960, 1027, 1184
Bsc4I CCNNNNNNNGG 1 cut(s) 1200
Bse118I RCCGGY 2 cut(s) 654, 827
Bse1I ACTGG 3 cut(s) 108, 490, 1085
Bse3DI GCAATG 2 cut(s) 974, 1235
BseBI CCWGG 3 cut(s) 58, 548, 1201
BseCI ATCGAT 2 cut(s) 257, 938
BseDI CCNNGG 5 cut(s) 56, 533, 960, 1027, 1184
BseGI GGATG 4 cut(s) 142, 346, 609, 703
BseLI CCNNNNNNNGG 1 cut(s) 1200
BseMI GCAATG 2 cut(s) 974, 1235
BseMII CTCAG 6 cut(s) 303, 579, 637, 813, 1076, 1095
BseNI ACTGG 3 cut(s) 108, 490, 1085
BseRI GAGGAG 2 cut(s) 1016, 1263
BseSI GKGCMC 1 cut(s) 138
Bsh1236I CGCG 2 cut(s) 201, 620
BshFI GGCC 2 cut(s) 136, 827
BshVI ATCGAT 2 cut(s) 257, 938
BsiHKAI GWGCWC 3 cut(s) 564, 609, 851
BsiSI CCGG 2 cut(s) 655, 828
BslFI GGGAC 2 cut(s) 464, 628
BslI CCNNNNNNNGG 1 cut(s) 1200
BsmAI GTCTC 1 cut(s) 144
BsmFI GGGAC 2 cut(s) 464, 628
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 2 cut(s) 136, 827
Bsp120I GGGCCC 1 cut(s) 134
Bsp1286I GDGCHC 5 cut(s) 138, 564, 594, 609, 851
Bsp1407I TGTACA 1 cut(s) 157
Bsp143I GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
Bsp1720I GCTNAGC 2 cut(s) 623, 1085
Bsp19I CCATGG 1 cut(s) 1184
BspACI CCGC 4 cut(s) 88, 618, 908, 1233
BspANI GGCC 2 cut(s) 136, 827
BspCNI CTCAG 6 cut(s) 304, 580, 636, 814, 1077, 1096
BspDI ATCGAT 2 cut(s) 257, 938
BspFNI CGCG 2 cut(s) 201, 620
BspLI GGNNCC 2 cut(s) 136, 950
BspPI GGATC 3 cut(s) 350, 675, 1175
BsrDI GCAATG 2 cut(s) 974, 1235
BsrFI RCCGGY 2 cut(s) 654, 827
BsrGI TGTACA 1 cut(s) 157
BsrI ACTGG 3 cut(s) 108, 490, 1085
BssAI RCCGGY 2 cut(s) 654, 827
BssECI CCNNGG 5 cut(s) 56, 533, 960, 1027, 1184
BssMI GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
BssNI GRCGYC 1 cut(s) 44
BssSI CACGAG 2 cut(s) 147, 330
BssT1I CCWWGG 3 cut(s) 533, 960, 1184
Bst2BI CACGAG 2 cut(s) 147, 330
Bst2UI CCWGG 3 cut(s) 58, 548, 1201
Bst4CI ACNGT 2 cut(s) 568, 642
BstACI GRCGYC 1 cut(s) 44
BstAUI TGTACA 1 cut(s) 157
BstBAI YACGTR 1 cut(s) 1076
BstC8I GCNNGC 2 cut(s) 829, 1118
BstDEI CTNAG 8 cut(s) 312, 517, 588, 623, 674, 822, 1085, 1104
BstDSI CCRYGG 1 cut(s) 1184
BstF5I GGATG 4 cut(s) 142, 346, 609, 703
BstFNI CGCG 2 cut(s) 201, 620
BstH2I RGCGCY 1 cut(s) 1092
BstHHI GCGC 3 cut(s) 201, 622, 1091
BstKTI GATC 7 cut(s) 261, 289, 358, 670, 724, 957, 1183
BstMAI GTCTC 1 cut(s) 144
BstMBI GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
BstNI CCWGG 3 cut(s) 58, 548, 1201
BstNSI RCATGY 1 cut(s) 487
BstSCI CCNGG 3 cut(s) 56, 546, 1199
BstSLI GKGCMC 1 cut(s) 138
BstSNI TACGTA 1 cut(s) 1076
BstUI CGCG 2 cut(s) 201, 620
BstX2I RGATCY 1 cut(s) 1180
BstYI RGATCY 1 cut(s) 1180
Bsu15I ATCGAT 2 cut(s) 257, 938
BsuRI GGCC 2 cut(s) 136, 827
BsuTUI ATCGAT 2 cut(s) 257, 938
BtgI CCRYGG 1 cut(s) 1184
BtsCI GGATG 4 cut(s) 142, 346, 609, 703
BtsIMutI CAGTG 1 cut(s) 753
Cac8I GCNNGC 2 cut(s) 829, 1118
CaiI CAGNNNCTG 1 cut(s) 812
CfoI GCGC 3 cut(s) 201, 622, 1091
Cfr10I RCCGGY 2 cut(s) 654, 827
Cfr13I GGNCC 3 cut(s) 134, 135, 709
ClaI ATCGAT 2 cut(s) 257, 938
CseI GACGC 2 cut(s) 15, 52
Csp6I GTAC 5 cut(s) 101, 158, 413, 493, 791
CviAII CATG 8 cut(s) 217, 307, 385, 475, 484, 503, 1185, 1281
CviQI GTAC 5 cut(s) 101, 158, 413, 493, 791
DdeI CTNAG 8 cut(s) 312, 517, 588, 623, 674, 822, 1085, 1104
DpnI GATC 7 cut(s) 260, 288, 357, 669, 723, 956, 1182
DpnII GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
Ecl136II GAGCTC 2 cut(s) 562, 849
Eco105I TACGTA 1 cut(s) 1076
Eco130I CCWWGG 3 cut(s) 533, 960, 1184
Eco24I GRGCYC 4 cut(s) 138, 564, 594, 851
Eco47I GGWCC 1 cut(s) 709
Eco47III AGCGCT 1 cut(s) 1090
Eco53kI GAGCTC 2 cut(s) 562, 849
Eco57I CTGAAG 4 cut(s) 52, 99, 789, 1096
EcoICRI GAGCTC 2 cut(s) 562, 849
EcoO109I RGGNCCY 1 cut(s) 135
EcoRII CCWGG 3 cut(s) 56, 546, 1199
EcoT14I CCWWGG 3 cut(s) 533, 960, 1184
EcoT38I GRGCYC 4 cut(s) 138, 564, 594, 851
ErhI CCWWGG 3 cut(s) 533, 960, 1184
FaeI CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1188, 1284
FaqI GGGAC 2 cut(s) 464, 628
FatI CATG 8 cut(s) 216, 306, 384, 474, 483, 502, 1184, 1280
FauNDI CATATG 1 cut(s) 497
FokI GGATG 4 cut(s) 129, 333, 596, 710
FriOI GRGCYC 4 cut(s) 138, 564, 594, 851
FspBI CTAG 3 cut(s) 410, 914, 1035
GlaI GCGC 3 cut(s) 200, 621, 1090
GsuI CTGGAG 2 cut(s) 530, 1260
HaeII RGCGCY 1 cut(s) 1092
HaeIII GGCC 2 cut(s) 136, 827
HapII CCGG 2 cut(s) 655, 828
HgaI GACGC 2 cut(s) 15, 52
HhaI GCGC 3 cut(s) 201, 622, 1091
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1188, 1284
Hin6I GCGC 3 cut(s) 199, 620, 1089
HinP1I GCGC 3 cut(s) 199, 620, 1089
HincII GTYRAC 1 cut(s) 930
HindII GTYRAC 1 cut(s) 930
HindIII AAGCTT 2 cut(s) 50, 1118
HinfI GANTC 5 cut(s) 529, 837, 904, 935, 1225
HpaI GTTAAC 1 cut(s) 930
HpaII CCGG 2 cut(s) 655, 828
HphI GGTGA 3 cut(s) 556, 607, 1222
Hpy166II GTNNAC 2 cut(s) 712, 930
Hpy188III TCNNGA 6 cut(s) 77, 332, 665, 719, 914, 946
Hpy8I GTNNAC 2 cut(s) 712, 930
Hpy99I CGWCG 2 cut(s) 31, 46
HpyAV CCTTC 3 cut(s) 215, 760, 1229
HpyCH4III ACNGT 2 cut(s) 568, 642
HpyCH4IV ACGT 3 cut(s) 99, 552, 1075
HpyCH4V TGCA 6 cut(s) 63, 344, 483, 785, 1240, 1247
HpyF3I CTNAG 8 cut(s) 312, 517, 588, 623, 674, 822, 1085, 1104
HpySE526I ACGT 3 cut(s) 99, 552, 1075
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1188, 1284
HspAI GCGC 3 cut(s) 199, 620, 1089
KroI GCCGGC 1 cut(s) 827
KroNI GCCGGC 1 cut(s) 829
KspAI GTTAAC 1 cut(s) 930
Kzo9I GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
LmnI GCTCC 2 cut(s) 854, 964
LweI GCATC 5 cut(s) 72, 263, 772, 919, 1144
MaeI CTAG 3 cut(s) 410, 914, 1035
MaeII ACGT 3 cut(s) 99, 552, 1075
MaeIII GTNAC 3 cut(s) 225, 1076, 1166
MalI GATC 7 cut(s) 260, 288, 357, 669, 723, 956, 1182
MboI GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
MboII GAAGA 3 cut(s) 43, 58, 1102
MflI RGATCY 1 cut(s) 1180
MhlI GDGCHC 5 cut(s) 138, 564, 594, 609, 851
MluCI AATT 6 cut(s) 161, 274, 685, 918, 1049, 1068
MroNI GCCGGC 1 cut(s) 827
MroXI GAANNNNTTC 1 cut(s) 773
MseI TTAA 2 cut(s) 456, 929
MspI CCGG 2 cut(s) 655, 828
MspR9I CCNGG 3 cut(s) 58, 548, 1201
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 3 cut(s) 58, 548, 1201
MvnI CGCG 2 cut(s) 201, 620
NaeI GCCGGC 1 cut(s) 829
NcoI CCATGG 1 cut(s) 1184
NdeI CATATG 1 cut(s) 497
NdeII GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
NgoMIV GCCGGC 1 cut(s) 827
NlaIII CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1188, 1284
NlaIV GGNNCC 2 cut(s) 136, 950
NmuCI GTSAC 1 cut(s) 225
NspI RCATGY 1 cut(s) 487
PctI GAATGC 1 cut(s) 887
PdiI GCCGGC 1 cut(s) 829
PdmI GAANNNNTTC 1 cut(s) 773
PfeI GAWTC 5 cut(s) 529, 837, 904, 935, 1225
PflMI CCANNNNNTGG 1 cut(s) 1200
PfoI TCCNGGA 2 cut(s) 546, 1199
Ppu21I YACGTR 1 cut(s) 1076
PshBI ATTAAT 1 cut(s) 456
Psp124BI GAGCTC 2 cut(s) 564, 851
Psp6I CCWGG 3 cut(s) 56, 546, 1199
PspGI CCWGG 3 cut(s) 56, 546, 1199
PspN4I GGNNCC 2 cut(s) 136, 950
PspOMI GGGCCC 1 cut(s) 134
PspPI GGNCC 3 cut(s) 134, 135, 709
PsrI GAACNNNNNNTAC 2 cut(s) 1159, 1191
PstNI CAGNNNCTG 1 cut(s) 812
PsuI RGATCY 1 cut(s) 1180
RsaI GTAC 5 cut(s) 102, 159, 414, 494, 792
RsaNI GTAC 5 cut(s) 101, 158, 413, 493, 791
SacI GAGCTC 2 cut(s) 564, 851
SaqAI TTAA 2 cut(s) 456, 929
Sau3AI GATC 7 cut(s) 258, 286, 355, 667, 721, 954, 1180
Sau96I GGNCC 3 cut(s) 134, 135, 709
ScrFI CCNGG 3 cut(s) 58, 548, 1201
SduI GDGCHC 5 cut(s) 138, 564, 594, 609, 851
SfaNI GCATC 5 cut(s) 72, 263, 772, 919, 1144
SinI GGWCC 1 cut(s) 709
SnaBI TACGTA 1 cut(s) 1076
Sse9I AATT 6 cut(s) 161, 274, 685, 918, 1049, 1068
SsiI CCGC 4 cut(s) 88, 618, 908, 1233
SspI AATATT 1 cut(s) 420
SspMI CTAG 3 cut(s) 410, 914, 1035
SstI GAGCTC 2 cut(s) 564, 851
StyD4I CCNGG 3 cut(s) 56, 546, 1199
StyI CCWWGG 3 cut(s) 533, 960, 1184
TaaI ACNGT 2 cut(s) 568, 642
TaiI ACGT 3 cut(s) 102, 555, 1078
TaqI TCGA 6 cut(s) 29, 41, 257, 720, 938, 1138
TasI AATT 6 cut(s) 161, 274, 685, 918, 1049, 1068
TatI WGTACW 3 cut(s) 157, 412, 492
TfiI GAWTC 5 cut(s) 529, 837, 904, 935, 1225
Tru1I TTAA 2 cut(s) 456, 929
Tru9I TTAA 2 cut(s) 456, 929
TscAI CASTG 1 cut(s) 760
TseFI GTSAC 1 cut(s) 225
Tsp45I GTSAC 1 cut(s) 225
TspDTI ATGAA 3 cut(s) 380, 714, 887
TspRI CASTG 1 cut(s) 760
Van91I CCANNNNNTGG 1 cut(s) 1200
VpaK11BI GGWCC 1 cut(s) 709
VspI ATTAAT 1 cut(s) 456
XapI RAATTY 1 cut(s) 1049
XbaI TCTAGA 1 cut(s) 913
XceI RCATGY 1 cut(s) 487
XmnI GAANNNNTTC 1 cut(s) 773
XspI CTAG 3 cut(s) 410, 914, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.