Rmu_sc0000861.1_g000068

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000861.1
OG0000188
Physical Location & Seq
Forward (+)
285030 .. 286418
1389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000861.1_g000068.1.cds

Sequence Viewer

Length: 1389 bp
atgggtagcagtgatatagaaaagggtaaagcggatgaaagcgtttcaattcatcaagaccggagaggtatgactatggaacaatggaaacgcaccttcaattatgagcttttggaggccaaatcatcacctgtgcctgtttcatgttgcatcttcaaagttcctgaggtgctacgaagacaaaaaaaggagttatacgaacctgacgtagtctcaatcggtccctttcaccgaggtgttgataaatttcaactagtggaaaatgtgaaaaaatggtatttaaactgtcttttcttgcccgtgcgcaaccgccaccgccagacagtattgaacatggatagcttgattgaaagcatcgagggacaagaaatacgcgcccggggttattattcagacccatgctatcatcttgaccaaaacgacttcataaagatgctcatactcgatggttgtttcttaatagaattatttcggaaggcaccttttaagcatgcagaagctcgacaagatgaaaacgaccctatcttcaacatgccttgtatgcttcaatacctataccatgatcttctgttgctagaaaatcagctaccttggtttgtgctcgagtctatctatagcctaattgaggatggtagccctatagcacccctcagtcaagtagtaatagacttcttcaaagattcagtggctgaagctataatttttagctatcccgatcccaagtctcccaagcttgagattcttcacatacttgatctgataagaacttccctcgttcagaaacatctggaacttgcaaaccaaaaggagacccccgcatcaaagttggtaaaccacttgccacagaggatacctagtgctgctgctctttcagaggcgggagttaaatttagaaagggcccctcaggttgcatattgaacataacgttcaaaggtggcattttcaccattcctcctctggctattgatgaaaggacaggtcctatgttcaggaaccttatggcctacgaacagtgttatggcagttgcaagcacaagataacttcctacgcggttttgatggctaaccttatcgatacgaacaaggatgtggatcttctatgtgaaaaacatattctagccaactggttgagtgccgatgatgcttcgaagttcttcaacgatctatacaatgacaccacagtcattgactatgtctacaagggagtttgcgatcaagtgcattcatatcgcaaagtaccatggcacaagtggagaaagaaattgaaacgtgattattttgaaacaccatggtctactatctcttttattgcagcttttgtcctcctggtccttaccttcttgcagaccatatacacactccaaccgtactatcatccccgctcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

462

Amino Acids

53.49

Weight (kDa)

6.92

Isoelectric Point (pI)

47.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1181
Acc16I TGCGCA 1 cut(s) 305
AccB1I GGYRCC 1 cut(s) 478
AccBSI CCGCTC 1 cut(s) 1383
AccI GTMKAC 2 cut(s) 1197, 1295
AccII CGCG 2 cut(s) 375, 1052
AciI CCGC 7 cut(s) 32, 310, 316, 816, 878, 1052, 1381
AclI AACGTT 1 cut(s) 926
AclWI GGATC 2 cut(s) 710, 1101
AcsI RAATTY 2 cut(s) 245, 887
AcuI CTGAAG 1 cut(s) 711
AfaI GTAC 2 cut(s) 1239, 1370
AfiI CCNNNNNNNGG 1 cut(s) 625
AhlI ACTAGT 1 cut(s) 253
AjnI CCWGG 1 cut(s) 1326
AleI CACNNNNGTG 1 cut(s) 234
AluBI AGCT 8 cut(s) 109, 342, 500, 586, 695, 708, 733, 1316
AluI AGCT 8 cut(s) 109, 342, 500, 586, 695, 708, 733, 1316
Alw21I GWGCWC 1 cut(s) 603
Alw26I GTCTC 3 cut(s) 217, 729, 803
AlwI GGATC 2 cut(s) 710, 1101
AlwNI CAGNNNCTG 1 cut(s) 689
Ama87I CYCGRG 2 cut(s) 378, 602
AoxI GGCC 3 cut(s) 117, 898, 1002
ApaI GGGCCC 1 cut(s) 902
ApeKI GCWGC 3 cut(s) 860, 863, 1313
ApoI RAATTY 2 cut(s) 245, 887
Asp700I GAANNNNTTC 2 cut(s) 468, 1154
AspLEI GCGC 2 cut(s) 306, 377
AspS9I GGNCC 5 cut(s) 221, 898, 899, 980, 1330
AsuC2I CCSGG 2 cut(s) 379, 380
AsuHPI GGTGA 3 cut(s) 120, 221, 937
AsuII TTCGAA 1 cut(s) 1148
AvaI CYCGRG 2 cut(s) 378, 602
AvaII GGWCC 3 cut(s) 221, 980, 1330
AxyI CCTNAGG 2 cut(s) 165, 904
BaeGI GKGCMC 1 cut(s) 902
BanI GGYRCC 1 cut(s) 478
BanII GRGCYC 1 cut(s) 902
BbsI GAAGAC 1 cut(s) 184
Bbv12I GWGCWC 1 cut(s) 603
BbvI GCAGC 3 cut(s) 847, 850, 1325
BccI CCATC 3 cut(s) 440, 623, 1054
BcgI CGANNNNNNTGC 2 cut(s) 1211, 1245
BciT130I CCWGG 1 cut(s) 1328
BciVI GTATCC 1 cut(s) 843
BcnI CCSGG 2 cut(s) 379, 380
BcoDI GTCTC 3 cut(s) 217, 729, 803
BcuI ACTAGT 1 cut(s) 253
BfaI CTAG 4 cut(s) 254, 575, 855, 1118
BfmI CTRYAG 2 cut(s) 613, 639
BfuI GTATCC 1 cut(s) 843
BisI GCNGC 3 cut(s) 861, 864, 1314
BlsI GCNGC 3 cut(s) 862, 865, 1315
Bme1390I CCNGG 3 cut(s) 379, 380, 1328
Bme18I GGWCC 3 cut(s) 221, 980, 1330
BmeT110I CYCGRG 2 cut(s) 378, 602
BmgT120I GGNCC 5 cut(s) 221, 898, 899, 980, 1330
BmiI GGNNCC 5 cut(s) 223, 480, 900, 901, 995
BmrFI CCNGG 3 cut(s) 379, 380, 1328
BmsI GCATC 5 cut(s) 159, 363, 423, 827, 1132
BpiI GAAGAC 1 cut(s) 184
Bpu14I TTCGAA 1 cut(s) 1148
BpuEI CTTGAG 1 cut(s) 755
BpuMI CCSGG 2 cut(s) 379, 380
Bsa29I ATCGAT 1 cut(s) 1074
BsaBI GATNNNNATC 1 cut(s) 1092
BsaI GGTCTC 1 cut(s) 803
BsaJI CCNNGG 6 cut(s) 232, 378, 379, 590, 1241, 1289
BsaWI WCCGGW 1 cut(s) 60
BsaXI ACNNNNNCTCC 2 cut(s) 937, 967
Bsc4I CCNNNNNNNGG 1 cut(s) 625
Bse1I ACTGG 1 cut(s) 1130
Bse21I CCTNAGG 2 cut(s) 165, 904
Bse8I GATNNNNATC 1 cut(s) 1092
BseBI CCWGG 1 cut(s) 1328
BseCI ATCGAT 1 cut(s) 1074
BseDI CCNNGG 6 cut(s) 232, 378, 379, 590, 1241, 1289
BseGI GGATG 4 cut(s) 40, 634, 1093, 1375
BseJI GATNNNNATC 1 cut(s) 1092
BseLI CCNNNNNNNGG 1 cut(s) 625
BseMII CTCAG 3 cut(s) 156, 664, 918
BseNI ACTGG 1 cut(s) 1130
BseRI GAGGAG 1 cut(s) 945
BseSI GKGCMC 1 cut(s) 902
BseXI GCAGC 3 cut(s) 847, 850, 1325
Bsh1236I CGCG 2 cut(s) 375, 1052
BshFI GGCC 3 cut(s) 119, 900, 1004
BshNI GGYRCC 1 cut(s) 478
BshVI ATCGAT 1 cut(s) 1074
BsiHKAI GWGCWC 1 cut(s) 603
BsiHKCI CYCGRG 2 cut(s) 378, 602
BsiSI CCGG 2 cut(s) 61, 379
BslFI GGGAC 2 cut(s) 207, 375
BslI CCNNNNNNNGG 1 cut(s) 625
BsmAI GTCTC 3 cut(s) 217, 729, 803
BsmFI GGGAC 2 cut(s) 207, 375
BsmI GAATGC 1 cut(s) 1222
BsnI GGCC 3 cut(s) 119, 900, 1004
Bso31I GGTCTC 1 cut(s) 803
BsoBI CYCGRG 2 cut(s) 378, 602
Bsp119I TTCGAA 1 cut(s) 1148
Bsp120I GGGCCC 1 cut(s) 898
Bsp1286I GDGCHC 2 cut(s) 603, 902
Bsp143I GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
Bsp19I CCATGG 2 cut(s) 1241, 1289
BspACI CCGC 7 cut(s) 32, 310, 316, 816, 878, 1052, 1381
BspANI GGCC 3 cut(s) 119, 900, 1004
BspCNI CTCAG 3 cut(s) 157, 663, 917
BspDI ATCGAT 1 cut(s) 1074
BspFNI CGCG 2 cut(s) 375, 1052
BspHI TCATGA 1 cut(s) 1385
BspLI GGNNCC 5 cut(s) 223, 480, 900, 901, 995
BspPI GGATC 2 cut(s) 710, 1101
BspT104I TTCGAA 1 cut(s) 1148
BspT107I GGYRCC 1 cut(s) 478
BspTNI GGTCTC 1 cut(s) 803
BsrBI CCGCTC 1 cut(s) 1383
BsrI ACTGG 1 cut(s) 1130
BssECI CCNNGG 6 cut(s) 232, 378, 379, 590, 1241, 1289
BssMI GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
BssT1I CCWWGG 3 cut(s) 590, 1241, 1289
Bst2UI CCWGG 1 cut(s) 1328
Bst4CI ACNGT 5 cut(s) 287, 325, 1014, 1183, 1368
BstBI TTCGAA 1 cut(s) 1148
BstC8I GCNNGC 2 cut(s) 492, 1031
BstDEI CTNAG 3 cut(s) 165, 650, 904
BstDSI CCRYGG 2 cut(s) 1241, 1289
BstENI CCTNNNNNAGG 1 cut(s) 623
BstF5I GGATG 4 cut(s) 40, 634, 1093, 1375
BstFNI CGCG 2 cut(s) 375, 1052
BstHHI GCGC 2 cut(s) 306, 377
BstKTI GATC 6 cut(s) 565, 718, 757, 1096, 1165, 1216
BstMAI GTCTC 3 cut(s) 217, 729, 803
BstMBI GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
BstMWI GCNNNNNNNGC 2 cut(s) 541, 1142
BstNI CCWGG 1 cut(s) 1328
BstNSI RCATGY 2 cut(s) 494, 535
BstSCI CCNGG 3 cut(s) 377, 378, 1326
BstSFI CTRYAG 2 cut(s) 613, 639
BstSLI GKGCMC 1 cut(s) 902
BstUI CGCG 2 cut(s) 375, 1052
BstV1I GCAGC 3 cut(s) 847, 850, 1325
BstV2I GAAGAC 1 cut(s) 184
BstX2I RGATCY 1 cut(s) 1093
BstYI RGATCY 1 cut(s) 1093
Bsu15I ATCGAT 1 cut(s) 1074
Bsu36I CCTNAGG 2 cut(s) 165, 904
BsuI GTATCC 1 cut(s) 843
BsuRI GGCC 3 cut(s) 119, 900, 1004
BsuTUI ATCGAT 1 cut(s) 1074
BtgI CCRYGG 2 cut(s) 1241, 1289
BtsCI GGATG 4 cut(s) 40, 634, 1093, 1375
BtsI GCAGTG 1 cut(s) 16
BtsIMutI CAGTG 3 cut(s) 16, 690, 1019
Cac8I GCNNGC 2 cut(s) 492, 1031
CaiI CAGNNNCTG 1 cut(s) 689
CciI TCATGA 1 cut(s) 1385
CfoI GCGC 2 cut(s) 306, 377
Cfr13I GGNCC 5 cut(s) 221, 898, 899, 980, 1330
Cfr9I CCCGGG 1 cut(s) 378
ClaI ATCGAT 1 cut(s) 1074
Csp6I GTAC 2 cut(s) 1238, 1369
CspCI CAANNNNNGTGG 2 cut(s) 1168, 1203
CviAII CATG 9 cut(s) 144, 334, 399, 491, 532, 560, 1242, 1290, 1386
CviQI GTAC 2 cut(s) 1238, 1369
DdeI CTNAG 3 cut(s) 165, 650, 904
DpnI GATC 6 cut(s) 564, 717, 756, 1095, 1164, 1215
DpnII GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
DraI TTTAAA 1 cut(s) 282
DrdI GACNNNNNNGTC 1 cut(s) 1181
DseDI GACNNNNNNGTC 1 cut(s) 1181
Eco130I CCWWGG 3 cut(s) 590, 1241, 1289
Eco24I GRGCYC 1 cut(s) 902
Eco31I GGTCTC 1 cut(s) 803
Eco47I GGWCC 3 cut(s) 221, 980, 1330
Eco57I CTGAAG 1 cut(s) 711
Eco81I CCTNAGG 2 cut(s) 165, 904
Eco88I CYCGRG 2 cut(s) 378, 602
EcoNI CCTNNNNNAGG 1 cut(s) 623
EcoO109I RGGNCCY 3 cut(s) 898, 899, 980
EcoRII CCWGG 1 cut(s) 1326
EcoT14I CCWWGG 3 cut(s) 590, 1241, 1289
EcoT38I GRGCYC 1 cut(s) 902
ErhI CCWWGG 3 cut(s) 590, 1241, 1289
FaeI CATG 9 cut(s) 147, 337, 402, 494, 535, 563, 1245, 1293, 1389
FaqI GGGAC 2 cut(s) 207, 375
FatI CATG 9 cut(s) 143, 333, 398, 490, 531, 559, 1241, 1289, 1385
FauI CCCGC 2 cut(s) 823, 871
FblI GTMKAC 2 cut(s) 1197, 1295
Fnu4HI GCNGC 3 cut(s) 861, 864, 1314
FokI GGATG 4 cut(s) 47, 641, 1100, 1362
FriOI GRGCYC 1 cut(s) 902
Fsp4HI GCNGC 3 cut(s) 861, 864, 1314
FspBI CTAG 4 cut(s) 254, 575, 855, 1118
FspI TGCGCA 1 cut(s) 305
GlaI GCGC 2 cut(s) 305, 376
GluI GCNGC 3 cut(s) 861, 864, 1314
HaeIII GGCC 3 cut(s) 119, 900, 1004
HapII CCGG 2 cut(s) 61, 379
HhaI GCGC 2 cut(s) 306, 377
Hin1II CATG 9 cut(s) 147, 337, 402, 494, 535, 563, 1245, 1293, 1389
Hin6I GCGC 2 cut(s) 304, 375
HinP1I GCGC 2 cut(s) 304, 375
HindIII AAGCTT 1 cut(s) 731
HinfI GANTC 3 cut(s) 605, 680, 739
HpaII CCGG 2 cut(s) 61, 379
HphI GGTGA 3 cut(s) 120, 221, 937
Hpy166II GTNNAC 3 cut(s) 832, 1198, 1296
Hpy188I TCNGA 5 cut(s) 394, 474, 759, 780, 874
Hpy188III TCNNGA 7 cut(s) 56, 164, 410, 713, 788, 991, 1386
Hpy8I GTNNAC 3 cut(s) 832, 1198, 1296
HpyAV CCTTC 3 cut(s) 106, 469, 1348
HpyCH4III ACNGT 5 cut(s) 287, 325, 1014, 1183, 1368
HpyCH4IV ACGT 3 cut(s) 207, 926, 1270
HpyCH4V TGCA 8 cut(s) 150, 494, 797, 912, 1029, 1222, 1313, 1345
HpyF10VI GCNNNNNNNGC 2 cut(s) 541, 1142
HpyF3I CTNAG 3 cut(s) 165, 650, 904
HpySE526I ACGT 3 cut(s) 207, 926, 1270
Hsp92II CATG 9 cut(s) 147, 337, 402, 494, 535, 563, 1245, 1293, 1389
HspAI GCGC 2 cut(s) 304, 375
Kzo9I GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
Lsp1109I GCAGC 3 cut(s) 847, 850, 1325
LweI GCATC 5 cut(s) 159, 363, 423, 827, 1132
MaeI CTAG 4 cut(s) 254, 575, 855, 1118
MaeII ACGT 3 cut(s) 207, 926, 1270
MalI GATC 6 cut(s) 564, 717, 756, 1095, 1164, 1215
MbiI CCGCTC 1 cut(s) 1383
MboI GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
MboII GAAGA 8 cut(s) 145, 189, 517, 557, 664, 734, 1088, 1147
MflI RGATCY 1 cut(s) 1093
MhlI GDGCHC 2 cut(s) 603, 902
MluCI AATT 8 cut(s) 48, 100, 245, 464, 621, 699, 887, 1262
MlyI GAGTC 1 cut(s) 614
MmeI TCCRAC 1 cut(s) 1387
MroXI GAANNNNTTC 2 cut(s) 468, 1154
MseI TTAA 4 cut(s) 281, 458, 486, 885
MslI CAYNNNNRTG 2 cut(s) 234, 431
MspI CCGG 2 cut(s) 61, 379
MspR9I CCNGG 3 cut(s) 379, 380, 1328
Mva1269I GAATGC 1 cut(s) 1222
MvaI CCWGG 1 cut(s) 1328
MvnI CGCG 2 cut(s) 375, 1052
MwoI GCNNNNNNNGC 2 cut(s) 541, 1142
NciI CCSGG 2 cut(s) 379, 380
NcoI CCATGG 2 cut(s) 1241, 1289
NdeII GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
NlaIII CATG 9 cut(s) 147, 337, 402, 494, 535, 563, 1245, 1293, 1389
NlaIV GGNNCC 5 cut(s) 223, 480, 900, 901, 995
NsbI TGCGCA 1 cut(s) 305
NspI RCATGY 2 cut(s) 494, 535
NspV TTCGAA 1 cut(s) 1148
OliI CACNNNNGTG 1 cut(s) 234
PaeI GCATGC 1 cut(s) 494
PaeR7I CTCGAG 1 cut(s) 602
PagI TCATGA 1 cut(s) 1385
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PctI GAATGC 1 cut(s) 1222
PdmI GAANNNNTTC 2 cut(s) 468, 1154
PfeI GAWTC 2 cut(s) 680, 739
PflFI GACNNNGTC 2 cut(s) 209, 1193
PkrI GCNGC 3 cut(s) 862, 865, 1315
PleI GAGTC 1 cut(s) 613
PpsI GAGTC 1 cut(s) 613
PpuMI RGGWCCY 1 cut(s) 980
Psp1406I AACGTT 1 cut(s) 926
Psp5II RGGWCCY 1 cut(s) 980
Psp6I CCWGG 1 cut(s) 1326
PspGI CCWGG 1 cut(s) 1326
PspN4I GGNNCC 5 cut(s) 223, 480, 900, 901, 995
PspOMI GGGCCC 1 cut(s) 898
PspPI GGNCC 5 cut(s) 221, 898, 899, 980, 1330
PspPPI RGGWCCY 1 cut(s) 980
PspXI VCTCGAGB 1 cut(s) 602
PstNI CAGNNNCTG 1 cut(s) 689
PsuI RGATCY 1 cut(s) 1093
PsyI GACNNNGTC 2 cut(s) 209, 1193
RsaI GTAC 2 cut(s) 1239, 1370
RsaNI GTAC 2 cut(s) 1238, 1369
RseI CAYNNNNRTG 2 cut(s) 234, 431
SaqAI TTAA 4 cut(s) 281, 458, 486, 885
SatI GCNGC 3 cut(s) 861, 864, 1314
Sau3AI GATC 6 cut(s) 562, 715, 754, 1093, 1162, 1213
Sau96I GGNCC 5 cut(s) 221, 898, 899, 980, 1330
SchI GAGTC 1 cut(s) 614
ScrFI CCNGG 3 cut(s) 379, 380, 1328
SduI GDGCHC 2 cut(s) 603, 902
SfaNI GCATC 5 cut(s) 159, 363, 423, 827, 1132
SfcI CTRYAG 2 cut(s) 613, 639
Sfr274I CTCGAG 1 cut(s) 602
SfuI TTCGAA 1 cut(s) 1148
SinI GGWCC 3 cut(s) 221, 980, 1330
SlaI CTCGAG 1 cut(s) 602
SmaI CCCGGG 1 cut(s) 380
SmiMI CAYNNNNRTG 2 cut(s) 234, 431
SmlI CTYRAG 2 cut(s) 602, 734
SmoI CTYRAG 2 cut(s) 602, 734
SpeI ACTAGT 1 cut(s) 253
SphI GCATGC 1 cut(s) 494
Sse9I AATT 8 cut(s) 48, 100, 245, 464, 621, 699, 887, 1262
SsiI CCGC 7 cut(s) 32, 310, 316, 816, 878, 1052, 1381
SspMI CTAG 4 cut(s) 254, 575, 855, 1118
StyD4I CCNGG 3 cut(s) 377, 378, 1326
StyI CCWWGG 3 cut(s) 590, 1241, 1289
TaaI ACNGT 5 cut(s) 287, 325, 1014, 1183, 1368
TaiI ACGT 3 cut(s) 210, 929, 1273
TaqI TCGA 6 cut(s) 357, 444, 502, 603, 1074, 1148
TaqII GACCGA 1 cut(s) 209
TasI AATT 8 cut(s) 48, 100, 245, 464, 621, 699, 887, 1262
TfiI GAWTC 2 cut(s) 680, 739
Tru1I TTAA 4 cut(s) 281, 458, 486, 885
Tru9I TTAA 4 cut(s) 281, 458, 486, 885
TscAI CASTG 3 cut(s) 16, 690, 1019
TseI GCWGC 3 cut(s) 860, 863, 1313
TspDTI ATGAA 7 cut(s) 41, 51, 132, 415, 525, 984, 1215
TspMI CCCGGG 1 cut(s) 378
TspRI CASTG 3 cut(s) 16, 690, 1019
Tth111I GACNNNGTC 2 cut(s) 209, 1193
VpaK11BI GGWCC 3 cut(s) 221, 980, 1330
XagI CCTNNNNNAGG 1 cut(s) 623
XapI RAATTY 2 cut(s) 245, 887
XceI RCATGY 2 cut(s) 494, 535
XcmI CCANNNNNNNNNTGG 2 cut(s) 955, 1248
XhoI CTCGAG 1 cut(s) 602
XmaI CCCGGG 1 cut(s) 378
XmiI GTMKAC 2 cut(s) 1197, 1295
XmnI GAANNNNTTC 2 cut(s) 468, 1154
XspI CTAG 4 cut(s) 254, 575, 855, 1118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.