UPF0481 protein At3g47200-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 3 cut(s) | 214, 1990, 2453 |
| AccI | GTMKAC | 1 cut(s) | 350 |
| AciI | CCGC | 7 cut(s) | 433, 588, 634, 739, 808, 1078, 1582 |
| AclI | AACGTT | 1 cut(s) | 1393 |
| AclWI | GGATC | 8 cut(s) | 764, 1186, 1251, 1542, 1875, 2253, 2256, 2269 |
| AcsI | RAATTY | 5 cut(s) | 1068, 1159, 1420, 1516, 2510 |
| AcuI | CTGAAG | 7 cut(s) | 27, 239, 1094, 1264, 1314, 1362, 2510 |
| AcvI | CACGTG | 1 cut(s) | 680 |
| AcyI | GRCGYC | 2 cut(s) | 1312, 2305 |
| AfaI | GTAC | 7 cut(s) | 175, 690, 995, 1277, 1428, 1552, 1648 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 214, 450, 664, 1440, 1990, 2103, 2453 |
| AflII | CTTAAG | 1 cut(s) | 1871 |
| AhlI | ACTAGT | 1 cut(s) | 1553 |
| AjnI | CCWGG | 3 cut(s) | 326, 449, 1439 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 430, 462, 983, 1015 |
| Alw21I | GWGCWC | 2 cut(s) | 1050, 1917 |
| Alw26I | GTCTC | 2 cut(s) | 1805, 2591 |
| AlwI | GGATC | 8 cut(s) | 764, 1186, 1251, 1542, 1875, 2253, 2256, 2269 |
| Ama87I | CYCGRG | 4 cut(s) | 192, 583, 797, 1043 |
| AoxI | GGCC | 3 cut(s) | 30, 580, 2455 |
| ApeKI | GCWGC | 4 cut(s) | 1109, 1666, 2018, 2592 |
| ApoI | RAATTY | 5 cut(s) | 1068, 1159, 1420, 1516, 2510 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 621, 653 |
| AseI | ATTAAT | 1 cut(s) | 360 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 620, 1160, 2487 |
| AspLEI | GCGC | 2 cut(s) | 1439, 1929 |
| AspS9I | GGNCC | 3 cut(s) | 581, 637, 2456 |
| AsuC2I | CCSGG | 2 cut(s) | 584, 585 |
| AsuHPI | GGTGA | 5 cut(s) | 58, 1580, 1879, 2080, 2262 |
| AvaI | CYCGRG | 4 cut(s) | 192, 583, 797, 1043 |
| AvaII | GGWCC | 1 cut(s) | 637 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 165, 198 |
| BamHI | GGATCC | 1 cut(s) | 2261 |
| BanII | GRGCYC | 3 cut(s) | 1050, 1063, 1917 |
| BbrPI | CACGTG | 1 cut(s) | 680 |
| BbsI | GAAGAC | 3 cut(s) | 1302, 1361, 2547 |
| Bbv12I | GWGCWC | 2 cut(s) | 1050, 1917 |
| BbvI | GCAGC | 4 cut(s) | 1096, 1678, 2030, 2604 |
| BccI | CCATC | 8 cut(s) | 124, 282, 535, 1263, 1445, 1938, 2365, 2638 |
| BceAI | ACGGC | 1 cut(s) | 1203 |
| BciT130I | CCWGG | 3 cut(s) | 328, 451, 1441 |
| BcnI | CCSGG | 2 cut(s) | 584, 585 |
| BcoDI | GTCTC | 2 cut(s) | 1805, 2591 |
| BcuI | ACTAGT | 1 cut(s) | 1553 |
| BfmI | CTRYAG | 2 cut(s) | 21, 2016 |
| BfoI | RGCGCY | 1 cut(s) | 1440 |
| BfrI | CTTAAG | 1 cut(s) | 1871 |
| BglII | AGATCT | 3 cut(s) | 1706, 2137, 2161 |
| BisI | GCNGC | 6 cut(s) | 433, 1110, 1582, 1667, 2019, 2593 |
| BlsI | GCNGC | 6 cut(s) | 434, 1111, 1583, 1668, 2020, 2594 |
| Bme1390I | CCNGG | 5 cut(s) | 328, 451, 584, 585, 1441 |
| Bme18I | GGWCC | 1 cut(s) | 637 |
| BmeT110I | CYCGRG | 4 cut(s) | 192, 583, 797, 1043 |
| BmgT120I | GGNCC | 3 cut(s) | 581, 637, 2456 |
| BmiI | GGNNCC | 3 cut(s) | 261, 638, 2263 |
| BmrFI | CCNGG | 5 cut(s) | 328, 451, 584, 585, 1441 |
| BmrI | ACTGGG | 1 cut(s) | 1066 |
| BmsI | GCATC | 5 cut(s) | 63, 223, 394, 1969, 2200 |
| BmuI | ACTGGG | 1 cut(s) | 1066 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1635, 2232 |
| BpiI | GAAGAC | 3 cut(s) | 1302, 1361, 2547 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 780, 812 |
| BpmI | CTGGAG | 4 cut(s) | 162, 408, 1128, 2498 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2334 |
| BpuEI | CTTGAG | 5 cut(s) | 1654, 1816, 1866, 2258, 2423 |
| BpuMI | CCSGG | 2 cut(s) | 584, 585 |
| Bsa29I | ATCGAT | 2 cut(s) | 165, 1449 |
| BsaAI | YACGTR | 1 cut(s) | 680 |
| BsaBI | GATNNNNATC | 1 cut(s) | 53 |
| BsaHI | GRCGYC | 2 cut(s) | 1312, 2305 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1980, 2010 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 214, 450, 664, 1440, 1990, 2103, 2453 |
| Bse1I | ACTGG | 6 cut(s) | 33, 179, 444, 1061, 1145, 2481 |
| Bse3DI | GCAATG | 2 cut(s) | 2397, 2514 |
| Bse8I | GATNNNNATC | 1 cut(s) | 53 |
| BseBI | CCWGG | 3 cut(s) | 328, 451, 1441 |
| BseCI | ATCGAT | 2 cut(s) | 165, 1449 |
| BseGI | GGATG | 4 cut(s) | 100, 135, 238, 270 |
| BseJI | GATNNNNATC | 1 cut(s) | 53 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 214, 450, 664, 1440, 1990, 2103, 2453 |
| BseMI | GCAATG | 2 cut(s) | 2397, 2514 |
| BseMII | CTCAG | 5 cut(s) | 305, 345, 933, 1816, 2325 |
| BseNI | ACTGG | 6 cut(s) | 33, 179, 444, 1061, 1145, 2481 |
| BseRI | GAGGAG | 1 cut(s) | 139 |
| BseXI | GCAGC | 4 cut(s) | 1096, 1678, 2030, 2604 |
| BseYI | CCCAGC | 1 cut(s) | 2125 |
| BshFI | GGCC | 3 cut(s) | 32, 582, 2457 |
| BshVI | ATCGAT | 2 cut(s) | 165, 1449 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1050, 1917 |
| BsiHKCI | CYCGRG | 4 cut(s) | 192, 583, 797, 1043 |
| BsiSI | CCGG | 1 cut(s) | 584 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 214, 450, 664, 1440, 1990, 2103, 2453 |
| BsmAI | GTCTC | 2 cut(s) | 1805, 2591 |
| BsmI | GAATGC | 2 cut(s) | 860, 1116 |
| BsnI | GGCC | 3 cut(s) | 32, 582, 2457 |
| BsoBI | CYCGRG | 4 cut(s) | 192, 583, 797, 1043 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1050, 1063, 1917 |
| BspACI | CCGC | 7 cut(s) | 433, 588, 634, 739, 808, 1078, 1582 |
| BspANI | GGCC | 3 cut(s) | 32, 582, 2457 |
| BspCNI | CTCAG | 5 cut(s) | 304, 346, 934, 1815, 2326 |
| BspDI | ATCGAT | 2 cut(s) | 165, 1449 |
| BspLI | GGNNCC | 3 cut(s) | 261, 638, 2263 |
| BspMAI | CTGCAG | 1 cut(s) | 2020 |
| BspPI | GGATC | 8 cut(s) | 764, 1186, 1251, 1542, 1875, 2253, 2256, 2269 |
| BspQI | GCTCTTC | 2 cut(s) | 414, 504 |
| BspTI | CTTAAG | 1 cut(s) | 1871 |
| BsrDI | GCAATG | 2 cut(s) | 2397, 2514 |
| BsrI | ACTGG | 6 cut(s) | 33, 179, 444, 1061, 1145, 2481 |
| BssNI | GRCGYC | 2 cut(s) | 1312, 2305 |
| BssT1I | CCWWGG | 6 cut(s) | 640, 1174, 1746, 1863, 1984, 2097 |
| Bst2UI | CCWGG | 3 cut(s) | 328, 451, 1441 |
| Bst4CI | ACNGT | 7 cut(s) | 537, 1766, 1825, 1922, 2325, 2546, 2637 |
| Bst6I | CTCTTC | 3 cut(s) | 414, 504, 2152 |
| BstACI | GRCGYC | 2 cut(s) | 1312, 2305 |
| BstAFI | CTTAAG | 1 cut(s) | 1871 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 404, 1741 |
| BstBAI | YACGTR | 1 cut(s) | 680 |
| BstC8I | GCNNGC | 5 cut(s) | 337, 430, 1091, 1114, 2009 |
| BstDEI | CTNAG | 8 cut(s) | 291, 354, 716, 915, 942, 1802, 2117, 2334 |
| BstDSI | CCRYGG | 1 cut(s) | 2321 |
| BstEII | GGTNACC | 1 cut(s) | 2316 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2101 |
| BstF5I | GGATG | 4 cut(s) | 100, 135, 238, 270 |
| BstH2I | RGCGCY | 1 cut(s) | 1440 |
| BstHHI | GCGC | 2 cut(s) | 1439, 1929 |
| BstMAI | GTCTC | 2 cut(s) | 1805, 2591 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 143, 404, 594, 1106, 1741, 2407 |
| BstNI | CCWGG | 3 cut(s) | 328, 451, 1441 |
| BstNSI | RCATGY | 4 cut(s) | 1629, 2011, 2503, 2564 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1635, 2232 |
| BstPI | GGTNACC | 1 cut(s) | 2316 |
| BstSCI | CCNGG | 5 cut(s) | 326, 449, 582, 583, 1439 |
| BstSFI | CTRYAG | 2 cut(s) | 21, 2016 |
| BstV1I | GCAGC | 4 cut(s) | 1096, 1678, 2030, 2604 |
| BstV2I | GAAGAC | 3 cut(s) | 1302, 1361, 2547 |
| BstX2I | RGATCY | 6 cut(s) | 1243, 1706, 1867, 2137, 2161, 2261 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1152, 2637 |
| BstYI | RGATCY | 6 cut(s) | 1243, 1706, 1867, 2137, 2161, 2261 |
| Bsu15I | ATCGAT | 2 cut(s) | 165, 1449 |
| BsuRI | GGCC | 3 cut(s) | 32, 582, 2457 |
| BsuTUI | ATCGAT | 2 cut(s) | 165, 1449 |
| BtgI | CCRYGG | 1 cut(s) | 2321 |
| BtgZI | GCGATG | 1 cut(s) | 260 |
| BtsCI | GGATG | 4 cut(s) | 100, 135, 238, 270 |
| BtsI | GCAGTG | 1 cut(s) | 1030 |
| BtsIMutI | CAGTG | 7 cut(s) | 26, 186, 1030, 1771, 2474, 2607, 2642 |
| Cac8I | GCNNGC | 5 cut(s) | 337, 430, 1091, 1114, 2009 |
| CfoI | GCGC | 2 cut(s) | 1439, 1929 |
| Cfr13I | GGNCC | 3 cut(s) | 581, 637, 2456 |
| Cfr9I | CCCGGG | 1 cut(s) | 583 |
| ClaI | ATCGAT | 2 cut(s) | 165, 1449 |
| CseI | GACGC | 4 cut(s) | 847, 1301, 2222, 2294 |
| Csp6I | GTAC | 7 cut(s) | 174, 689, 994, 1276, 1427, 1551, 1647 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2205, 2240 |
| CviQI | GTAC | 7 cut(s) | 174, 689, 994, 1276, 1427, 1551, 1647 |
| DdeI | CTNAG | 8 cut(s) | 291, 354, 716, 915, 942, 1802, 2117, 2334 |
| Eam1104I | CTCTTC | 3 cut(s) | 414, 504, 2152 |
| EarI | CTCTTC | 3 cut(s) | 414, 504, 2152 |
| EciI | GGCGGA | 1 cut(s) | 754 |
| Ecl136II | GAGCTC | 2 cut(s) | 1048, 1915 |
| Eco130I | CCWWGG | 6 cut(s) | 640, 1174, 1746, 1863, 1984, 2097 |
| Eco24I | GRGCYC | 3 cut(s) | 1050, 1063, 1917 |
| Eco32I | GATATC | 1 cut(s) | 1606 |
| Eco47I | GGWCC | 1 cut(s) | 637 |
| Eco53kI | GAGCTC | 2 cut(s) | 1048, 1915 |
| Eco57I | CTGAAG | 7 cut(s) | 27, 239, 1094, 1264, 1314, 1362, 2510 |
| Eco72I | CACGTG | 1 cut(s) | 680 |
| Eco88I | CYCGRG | 4 cut(s) | 192, 583, 797, 1043 |
| Eco91I | GGTNACC | 1 cut(s) | 2316 |
| EcoICRI | GAGCTC | 2 cut(s) | 1048, 1915 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2101 |
| EcoO65I | GGTNACC | 1 cut(s) | 2316 |
| EcoRI | GAATTC | 1 cut(s) | 2510 |
| EcoRII | CCWGG | 3 cut(s) | 326, 449, 1439 |
| EcoRV | GATATC | 1 cut(s) | 1606 |
| EcoT14I | CCWWGG | 6 cut(s) | 640, 1174, 1746, 1863, 1984, 2097 |
| EcoT38I | GRGCYC | 3 cut(s) | 1050, 1063, 1917 |
| ErhI | CCWWGG | 6 cut(s) | 640, 1174, 1746, 1863, 1984, 2097 |
| FauI | CCCGC | 1 cut(s) | 627 |
| FauNDI | CATATG | 1 cut(s) | 2250 |
| FblI | GTMKAC | 1 cut(s) | 350 |
| Fnu4HI | GCNGC | 6 cut(s) | 433, 1110, 1582, 1667, 2019, 2593 |
| FokI | GGATG | 4 cut(s) | 107, 142, 245, 257 |
| FriOI | GRGCYC | 3 cut(s) | 1050, 1063, 1917 |
| Fsp4HI | GCNGC | 6 cut(s) | 433, 1110, 1582, 1667, 2019, 2593 |
| GlaI | GCGC | 2 cut(s) | 1438, 1928 |
| GluI | GCNGC | 6 cut(s) | 433, 1110, 1582, 1667, 2019, 2593 |
| GsaI | CCCAGC | 1 cut(s) | 2129 |
| GsuI | CTGGAG | 4 cut(s) | 162, 408, 1128, 2498 |
| HaeII | RGCGCY | 1 cut(s) | 1440 |
| HaeIII | GGCC | 3 cut(s) | 32, 582, 2457 |
| HapII | CCGG | 1 cut(s) | 584 |
| HgaI | GACGC | 4 cut(s) | 847, 1301, 2222, 2294 |
| HhaI | GCGC | 2 cut(s) | 1439, 1929 |
| Hin1I | GRCGYC | 2 cut(s) | 1312, 2305 |
| Hin6I | GCGC | 2 cut(s) | 1437, 1927 |
| HinP1I | GCGC | 2 cut(s) | 1437, 1927 |
| HincII | GTYRAC | 1 cut(s) | 351 |
| HindII | GTYRAC | 1 cut(s) | 351 |
| HindIII | AAGCTT | 2 cut(s) | 660, 2522 |
| HpaII | CCGG | 1 cut(s) | 584 |
| HphI | GGTGA | 5 cut(s) | 58, 1580, 1879, 2080, 2262 |
| Hpy166II | GTNNAC | 4 cut(s) | 351, 974, 1040, 2227 |
| Hpy8I | GTNNAC | 4 cut(s) | 351, 974, 1040, 2227 |
| Hpy99I | CGWCG | 1 cut(s) | 863 |
| HpyAV | CCTTC | 9 cut(s) | 449, 610, 736, 1003, 1022, 1337, 2059, 2097, 2277 |
| HpyCH4III | ACNGT | 7 cut(s) | 537, 1766, 1825, 1922, 2325, 2546, 2637 |
| HpyCH4IV | ACGT | 3 cut(s) | 76, 679, 1393 |
| HpyCH4V | TGCA | 9 cut(s) | 683, 1005, 1100, 1625, 1735, 2018, 2254, 2351, 2503 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 143, 404, 594, 1106, 1741, 2407 |
| HpyF3I | CTNAG | 8 cut(s) | 291, 354, 716, 915, 942, 1802, 2117, 2334 |
| HpySE526I | ACGT | 3 cut(s) | 76, 679, 1393 |
| Hsp92I | GRCGYC | 2 cut(s) | 1312, 2305 |
| HspAI | GCGC | 2 cut(s) | 1437, 1927 |
| LguI | GCTCTTC | 2 cut(s) | 414, 504 |
| LmnI | GCTCC | 3 cut(s) | 427, 1920, 2387 |
| Lsp1109I | GCAGC | 4 cut(s) | 1096, 1678, 2030, 2604 |
| LweI | GCATC | 5 cut(s) | 63, 223, 394, 1969, 2200 |
| MaeII | ACGT | 3 cut(s) | 76, 679, 1393 |
| MaeIII | GTNAC | 7 cut(s) | 1235, 1490, 1628, 1885, 2055, 2316, 2439 |
| MflI | RGATCY | 6 cut(s) | 1243, 1706, 1867, 2137, 2161, 2261 |
| MhlI | GDGCHC | 3 cut(s) | 1050, 1063, 1917 |
| MlyI | GAGTC | 8 cut(s) | 96, 143, 184, 973, 1628, 1645, 1807, 2577 |
| MmeI | TCCRAC | 4 cut(s) | 1274, 1393, 2223, 2408 |
| MroXI | GAANNNNTTC | 3 cut(s) | 620, 1160, 2487 |
| MseI | TTAA | 8 cut(s) | 35, 360, 1718, 1787, 1818, 1872, 2091, 2340 |
| MslI | CAYNNNNRTG | 2 cut(s) | 165, 2635 |
| MspCI | CTTAAG | 1 cut(s) | 1871 |
| MspI | CCGG | 1 cut(s) | 584 |
| MspR9I | CCNGG | 5 cut(s) | 328, 451, 584, 585, 1441 |
| Mva1269I | GAATGC | 2 cut(s) | 860, 1116 |
| MvaI | CCWGG | 3 cut(s) | 328, 451, 1441 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 143, 404, 594, 1106, 1741, 2407 |
| NciI | CCSGG | 2 cut(s) | 584, 585 |
| NdeI | CATATG | 1 cut(s) | 2250 |
| NlaIV | GGNNCC | 3 cut(s) | 261, 638, 2263 |
| NmeAIII | GCCGAG | 2 cut(s) | 1537, 2568 |
| NmuCI | GTSAC | 5 cut(s) | 1490, 1628, 1885, 2055, 2439 |
| NspI | RCATGY | 4 cut(s) | 1629, 2011, 2503, 2564 |
| PaeI | GCATGC | 1 cut(s) | 2011 |
| PaeR7I | CTCGAG | 3 cut(s) | 192, 797, 1043 |
| PciSI | GCTCTTC | 2 cut(s) | 414, 504 |
| PctI | GAATGC | 2 cut(s) | 860, 1116 |
| PdmI | GAANNNNTTC | 3 cut(s) | 620, 1160, 2487 |
| PfeI | GAWTC | 7 cut(s) | 551, 897, 1196, 1843, 2329, 2534, 2620 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 214, 1990, 2453 |
| PkrI | GCNGC | 6 cut(s) | 434, 1111, 1583, 1668, 2020, 2594 |
| PleI | GAGTC | 8 cut(s) | 95, 143, 184, 972, 1627, 1644, 1806, 2576 |
| PmaCI | CACGTG | 1 cut(s) | 680 |
| PmlI | CACGTG | 1 cut(s) | 680 |
| PpsI | GAGTC | 8 cut(s) | 95, 143, 184, 972, 1627, 1644, 1806, 2576 |
| Ppu21I | YACGTR | 1 cut(s) | 680 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1635, 2232 |
| PshBI | ATTAAT | 1 cut(s) | 360 |
| Psp124BI | GAGCTC | 2 cut(s) | 1050, 1917 |
| Psp1406I | AACGTT | 1 cut(s) | 1393 |
| Psp6I | CCWGG | 3 cut(s) | 326, 449, 1439 |
| PspCI | CACGTG | 1 cut(s) | 680 |
| PspEI | GGTNACC | 1 cut(s) | 2316 |
| PspFI | CCCAGC | 1 cut(s) | 2125 |
| PspGI | CCWGG | 3 cut(s) | 326, 449, 1439 |
| PspN4I | GGNNCC | 3 cut(s) | 261, 638, 2263 |
| PspPI | GGNCC | 3 cut(s) | 581, 637, 2456 |
| PspXI | VCTCGAGB | 2 cut(s) | 192, 1043 |
| PstI | CTGCAG | 1 cut(s) | 2020 |
| PsuI | RGATCY | 6 cut(s) | 1243, 1706, 1867, 2137, 2161, 2261 |
| RsaI | GTAC | 7 cut(s) | 175, 690, 995, 1277, 1428, 1552, 1648 |
| RsaNI | GTAC | 7 cut(s) | 174, 689, 994, 1276, 1427, 1551, 1647 |
| RseI | CAYNNNNRTG | 2 cut(s) | 165, 2635 |
| SacI | GAGCTC | 2 cut(s) | 1050, 1917 |
| SalI | GTCGAC | 1 cut(s) | 349 |
| SapI | GCTCTTC | 2 cut(s) | 414, 504 |
| SaqAI | TTAA | 8 cut(s) | 35, 360, 1718, 1787, 1818, 1872, 2091, 2340 |
| SatI | GCNGC | 6 cut(s) | 433, 1110, 1582, 1667, 2019, 2593 |
| Sau96I | GGNCC | 3 cut(s) | 581, 637, 2456 |
| SchI | GAGTC | 8 cut(s) | 96, 143, 184, 973, 1628, 1645, 1807, 2577 |
| ScrFI | CCNGG | 5 cut(s) | 328, 451, 584, 585, 1441 |
| SduI | GDGCHC | 3 cut(s) | 1050, 1063, 1917 |
| SfaNI | GCATC | 5 cut(s) | 63, 223, 394, 1969, 2200 |
| SfcI | CTRYAG | 2 cut(s) | 21, 2016 |
| Sfr274I | CTCGAG | 3 cut(s) | 192, 797, 1043 |
| SinI | GGWCC | 1 cut(s) | 637 |
| SlaI | CTCGAG | 3 cut(s) | 192, 797, 1043 |
| SmaI | CCCGGG | 1 cut(s) | 585 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 165, 2635 |
| SmlI | CTYRAG | 9 cut(s) | 192, 797, 1043, 1633, 1795, 1871, 1881, 2237, 2402 |
| SmoI | CTYRAG | 9 cut(s) | 192, 797, 1043, 1633, 1795, 1871, 1881, 2237, 2402 |
| SpeI | ACTAGT | 1 cut(s) | 1553 |
| SphI | GCATGC | 1 cut(s) | 2011 |
| SrfI | GCCCGGGC | 1 cut(s) | 585 |
| SsiI | CCGC | 7 cut(s) | 433, 588, 634, 739, 808, 1078, 1582 |
| SspI | AATATT | 1 cut(s) | 2026 |
| SstI | GAGCTC | 2 cut(s) | 1050, 1917 |
| StyD4I | CCNGG | 5 cut(s) | 326, 449, 582, 583, 1439 |
| StyI | CCWWGG | 6 cut(s) | 640, 1174, 1746, 1863, 1984, 2097 |
| TaaI | ACNGT | 7 cut(s) | 537, 1766, 1825, 1922, 2325, 2546, 2637 |
| TaiI | ACGT | 3 cut(s) | 79, 682, 1396 |
| TatI | WGTACW | 2 cut(s) | 688, 1275 |
| TauI | GCSGC | 2 cut(s) | 435, 1584 |
| TfiI | GAWTC | 7 cut(s) | 551, 897, 1196, 1843, 2329, 2534, 2620 |
| Tru1I | TTAA | 8 cut(s) | 35, 360, 1718, 1787, 1818, 1872, 2091, 2340 |
| Tru9I | TTAA | 8 cut(s) | 35, 360, 1718, 1787, 1818, 1872, 2091, 2340 |
| TscAI | CASTG | 7 cut(s) | 33, 186, 1030, 1771, 2481, 2614, 2642 |
| TseFI | GTSAC | 5 cut(s) | 1490, 1628, 1885, 2055, 2439 |
| TseI | GCWGC | 4 cut(s) | 1109, 1666, 2018, 2592 |
| Tsp45I | GTSAC | 5 cut(s) | 1490, 1628, 1885, 2055, 2439 |
| TspGWI | ACGGA | 1 cut(s) | 2169 |
| TspMI | CCCGGG | 1 cut(s) | 583 |
| TspRI | CASTG | 7 cut(s) | 33, 186, 1030, 1771, 2481, 2614, 2642 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 214, 1990, 2453 |
| Vha464I | CTTAAG | 1 cut(s) | 1871 |
| VpaK11BI | GGWCC | 1 cut(s) | 637 |
| VspI | ATTAAT | 1 cut(s) | 360 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2101 |
| XapI | RAATTY | 5 cut(s) | 1068, 1159, 1420, 1516, 2510 |
| XbaI | TCTAGA | 3 cut(s) | 2140, 2281, 2308 |
| XceI | RCATGY | 4 cut(s) | 1629, 2011, 2503, 2564 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1172 |
| XhoI | CTCGAG | 3 cut(s) | 192, 797, 1043 |
| XmaI | CCCGGG | 1 cut(s) | 583 |
| XmiI | GTMKAC | 1 cut(s) | 350 |
| XmnI | GAANNNNTTC | 3 cut(s) | 620, 1160, 2487 |