Rmu_sc0011497.1_g000002

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011497.1
OG0000188
Physical Location & Seq
Forward (+)
2776 .. 6438
3663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011497.1_g000002.1.cds

Sequence Viewer

Length: 1557 bp
atggcagatgaagtcagtgcagatgaagattattctcttgccgtcgcatcttccattgagaggaagttaggccaagtttcaccggtgtccgatacttattctgttttcagagttccagaggtggtccgaagacgagatatttatgcatatcgacccagtgttatctcgataggaccattgcacagagacggcgggaatgagtacctgttcatggaaaatgtgaaaagattgtattttcagaccatcctcccgaaaggtgcagatttgctacgcttagttagagccgttacgaagattgaaacacaagcccgtcagtgttatgcagacaatttggatcatattaactctgaggactttgttgagatgctggttgttgatggctgttttcttgtagagtttcttcgcaggcaatctttccgcattgagccggagccggactataacgaccccatttccagaatagtcggtctgcgccacaccatctatcaagatcttgtgctgttagagaatcaattgccttggtgtgtgctcgatgatttgcacaccgaattaagtatgagtaccgggcttcacaatgatttccaaaatttttccctaactgatctggtgatggacttcttcagacttgaatcagggattgatttttttatcatggagtccaacctcgaaaatgtatttgctgtgcacatccttgatgtcattagatgttccctcattgctgcaaaagatgaagaatactatgctgcacaagattcaaaataccatgaatacaagggtgattatgatgagaagatattgggtaatacgattcctaatgctgttgctctctcagaggtgggcataaaattcaaaaagggcacccgaggttgtataatggatatagagttcaagaatggtgtttttaccattccgccatttgaattcaagacatcggatgttcggttgttcagtaacatgattgcattcgagtgcgctgcataccagagacccctgataacctcctacttgatgttgatgaataacctaatcacttcgagcaaggatgtagagttgttagctgagaaaggaatattgaccaagtcgaaggctactgctgagttcttaaacaagctttcctataatgtcatttttaatgtcaatacaaccagattttcatcctgcgactgggtcctctacagcgatgtccgcaagtattacagaaatcagttggacaagtgtttaccaaaaaaattccagtggatgaaggtattgaagcatgactattttggcctactccacgttggacttttccttgcatctcttcaaagtccattttactataacctacagatcccttcgcctgataacgatgatgtccaagaagctgatgctgatgttactgattctggagatgatcttggtggtgatatgcacaatagaacacaatgggatgttactgattctgccgaagaccctgtaaaaggtaatcgtaatttgtattgttattatgtgctgatgttctccagtcatgtttttgtttttgcttttcgcaaaatatatacttgggatactagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

518

Amino Acids

59.79

Weight (kDa)

5.0

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 857
AciI CCGC 4 cut(s) 192, 418, 911, 1186
AclWI GGATC 2 cut(s) 342, 1324
AcsI RAATTY 4 cut(s) 586, 845, 920, 1229
AcuI CTGAAG 1 cut(s) 604
AfaI GTAC 2 cut(s) 203, 562
AfiI CCNNNNNNNGG 4 cut(s) 60, 211, 1164, 1460
AgeI ACCGGT 1 cut(s) 82
AgsI TTSAA 9 cut(s) 299, 629, 756, 850, 889, 920, 925, 1252, 1304
AloI GAACNNNNNNTCC 2 cut(s) 869, 901
AluBI AGCT 3 cut(s) 1058, 1111, 1364
AluI AGCT 3 cut(s) 1058, 1111, 1364
Alw21I GWGCWC 2 cut(s) 531, 687
Alw26I GTCTC 2 cut(s) 180, 979
Alw44I GTGCAC 1 cut(s) 683
AlwI GGATC 2 cut(s) 342, 1324
Ama87I CYCGRG 1 cut(s) 861
AoxI GGCC 2 cut(s) 70, 1267
ApaLI GTGCAC 1 cut(s) 683
ApeKI GCWGC 3 cut(s) 719, 743, 974
ApoI RAATTY 4 cut(s) 586, 845, 920, 1229
AsiGI ACCGGT 1 cut(s) 82
AspLEI GCGC 2 cut(s) 474, 974
AspS9I GGNCC 3 cut(s) 124, 173, 1168
AsuC2I CCSGG 1 cut(s) 565
AsuHPI GGTGA 4 cut(s) 72, 619, 788, 1415
AvaI CYCGRG 1 cut(s) 861
AvaII GGWCC 3 cut(s) 124, 173, 1168
BaeGI GKGCMC 2 cut(s) 687, 860
BanI GGYRCC 1 cut(s) 857
BarI GAAGNNNNNNTAC 2 cut(s) 384, 416
BbsI GAAGAC 2 cut(s) 136, 1455
Bbv12I GWGCWC 2 cut(s) 531, 687
BbvI GCAGC 3 cut(s) 706, 730, 961
BccI CCATC 4 cut(s) 251, 371, 488, 604
BceAI ACGGC 3 cut(s) 26, 205, 269
BcgI CGANNNNNNTGC 2 cut(s) 956, 990
BciVI GTATCC 1 cut(s) 1540
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 2 cut(s) 180, 979
BfaI CTAG 1 cut(s) 1551
BfmI CTRYAG 2 cut(s) 1174, 1325
BfuI GTATCC 1 cut(s) 1540
BglII AGATCT 1 cut(s) 490
BisI GCNGC 3 cut(s) 720, 744, 975
BlsI GCNGC 3 cut(s) 721, 745, 976
Bme1390I CCNGG 1 cut(s) 565
Bme18I GGWCC 3 cut(s) 124, 173, 1168
BmeT110I CYCGRG 1 cut(s) 861
BmgT120I GGNCC 3 cut(s) 124, 173, 1168
BmiI GGNNCC 3 cut(s) 432, 859, 1169
BmrFI CCNGG 1 cut(s) 565
BmrI ACTGGG 2 cut(s) 150, 1174
BmsI GCATC 4 cut(s) 56, 354, 1304, 1357
BmuI ACTGGG 2 cut(s) 150, 1174
BpiI GAAGAC 2 cut(s) 136, 1455
BpmI CTGGAG 2 cut(s) 1407, 1486
BpuMI CCSGG 1 cut(s) 565
BsaBI GATNNNNATC 1 cut(s) 1153
BsaI GGTCTC 1 cut(s) 979
BsaJI CCNNGG 2 cut(s) 518, 862
BsaWI WCCGGW 1 cut(s) 82
Bsc4I CCNNNNNNNGG 4 cut(s) 60, 211, 1164, 1460
Bse118I RCCGGY 1 cut(s) 82
Bse1I ACTGG 4 cut(s) 156, 1169, 1234, 1503
Bse3DI GCAATG 2 cut(s) 176, 714
Bse8I GATNNNNATC 1 cut(s) 1153
BseDI CCNNGG 2 cut(s) 518, 862
BseGI GGATG 7 cut(s) 243, 687, 940, 1048, 1154, 1245, 1435
BseJI GATNNNNATC 1 cut(s) 1153
BseLI CCNNNNNNNGG 4 cut(s) 60, 211, 1164, 1460
BseMI GCAATG 2 cut(s) 176, 714
BseMII CTCAG 4 cut(s) 339, 843, 1050, 1086
BseNI ACTGG 4 cut(s) 156, 1169, 1234, 1503
BseSI GKGCMC 2 cut(s) 687, 860
BseXI GCAGC 3 cut(s) 706, 730, 961
BsgI GTGCAG 3 cut(s) 39, 279, 729
BshFI GGCC 2 cut(s) 72, 1269
BshNI GGYRCC 1 cut(s) 857
BshTI ACCGGT 1 cut(s) 82
BsiHKAI GWGCWC 2 cut(s) 531, 687
BsiHKCI CYCGRG 1 cut(s) 861
BsiSI CCGG 4 cut(s) 83, 428, 434, 564
BslI CCNNNNNNNGG 4 cut(s) 60, 211, 1164, 1460
BsmAI GTCTC 2 cut(s) 180, 979
BsmBI CGTCTC 1 cut(s) 180
BsmI GAATGC 1 cut(s) 962
BsnI GGCC 2 cut(s) 72, 1269
Bso31I GGTCTC 1 cut(s) 979
BsoBI CYCGRG 1 cut(s) 861
Bsp1286I GDGCHC 3 cut(s) 531, 687, 860
Bsp143I GATC 5 cut(s) 334, 490, 601, 1329, 1393
BspACI CCGC 4 cut(s) 192, 418, 911, 1186
BspANI GGCC 2 cut(s) 72, 1269
BspCNI CTCAG 4 cut(s) 340, 842, 1051, 1087
BspLI GGNNCC 3 cut(s) 432, 859, 1169
BspPI GGATC 2 cut(s) 342, 1324
BspT107I GGYRCC 1 cut(s) 857
BspTNI GGTCTC 1 cut(s) 979
BsrDI GCAATG 2 cut(s) 176, 714
BsrFI RCCGGY 1 cut(s) 82
BsrI ACTGG 4 cut(s) 156, 1169, 1234, 1503
BssAI RCCGGY 1 cut(s) 82
BssECI CCNNGG 2 cut(s) 518, 862
BssMI GATC 5 cut(s) 334, 490, 601, 1329, 1393
BssT1I CCWWGG 1 cut(s) 518
Bst6I CTCTTC 1 cut(s) 1305
BstC8I GCNNGC 1 cut(s) 407
BstDEI CTNAG 5 cut(s) 274, 348, 829, 1059, 1095
BstENI CCTNNNNNAGG 1 cut(s) 1458
BstF5I GGATG 7 cut(s) 243, 687, 940, 1048, 1154, 1245, 1435
BstHHI GCGC 2 cut(s) 474, 974
BstKTI GATC 5 cut(s) 337, 493, 604, 1332, 1396
BstMAI GTCTC 2 cut(s) 180, 979
BstMBI GATC 5 cut(s) 334, 490, 601, 1329, 1393
BstMWI GCNNNNNNNGC 1 cut(s) 1185
BstSCI CCNGG 1 cut(s) 563
BstSFI CTRYAG 2 cut(s) 1174, 1325
BstSLI GKGCMC 2 cut(s) 687, 860
BstV1I GCAGC 3 cut(s) 706, 730, 961
BstV2I GAAGAC 2 cut(s) 136, 1455
BstX2I RGATCY 2 cut(s) 490, 1329
BstYI RGATCY 2 cut(s) 490, 1329
BsuI GTATCC 1 cut(s) 1540
BsuRI GGCC 2 cut(s) 72, 1269
BtgZI GCGATG 1 cut(s) 1194
BtsCI GGATG 7 cut(s) 243, 687, 940, 1048, 1154, 1245, 1435
BtsIMutI CAGTG 4 cut(s) 22, 163, 320, 1241
Cac8I GCNNGC 1 cut(s) 407
CfoI GCGC 2 cut(s) 474, 974
Cfr10I RCCGGY 1 cut(s) 82
Cfr13I GGNCC 3 cut(s) 124, 173, 1168
Csp6I GTAC 2 cut(s) 202, 561
CspAI ACCGGT 1 cut(s) 82
CviAII CATG 6 cut(s) 211, 652, 764, 955, 1256, 1508
CviQI GTAC 2 cut(s) 202, 561
DdeI CTNAG 5 cut(s) 274, 348, 829, 1059, 1095
DpnI GATC 5 cut(s) 336, 492, 603, 1331, 1395
DpnII GATC 5 cut(s) 334, 490, 601, 1329, 1393
Eam1104I CTCTTC 1 cut(s) 1305
EarI CTCTTC 1 cut(s) 1305
EciI GGCGGA 1 cut(s) 900
Eco130I CCWWGG 1 cut(s) 518
Eco31I GGTCTC 1 cut(s) 979
Eco47I GGWCC 3 cut(s) 124, 173, 1168
Eco57I CTGAAG 1 cut(s) 604
Eco88I CYCGRG 1 cut(s) 861
EcoNI CCTNNNNNAGG 1 cut(s) 1458
EcoO109I RGGNCCY 1 cut(s) 1168
EcoRI GAATTC 1 cut(s) 920
EcoT14I CCWWGG 1 cut(s) 518
EcoT22I ATGCAT 1 cut(s) 148
ErhI CCWWGG 1 cut(s) 518
Esp3I CGTCTC 1 cut(s) 180
FaeI CATG 6 cut(s) 214, 655, 767, 958, 1259, 1511
FatI CATG 6 cut(s) 210, 651, 763, 954, 1255, 1507
FauI CCCGC 1 cut(s) 185
Fnu4HI GCNGC 3 cut(s) 720, 744, 975
FokI GGATG 7 cut(s) 230, 674, 947, 1055, 1141, 1252, 1442
Fsp4HI GCNGC 3 cut(s) 720, 744, 975
FspBI CTAG 1 cut(s) 1551
GlaI GCGC 2 cut(s) 473, 973
GluI GCNGC 3 cut(s) 720, 744, 975
GsuI CTGGAG 2 cut(s) 1407, 1486
HaeIII GGCC 2 cut(s) 72, 1269
HapII CCGG 4 cut(s) 83, 428, 434, 564
HhaI GCGC 2 cut(s) 474, 974
Hin1II CATG 6 cut(s) 214, 655, 767, 958, 1259, 1511
Hin6I GCGC 2 cut(s) 472, 972
HinP1I GCGC 2 cut(s) 472, 972
HindIII AAGCTT 1 cut(s) 1109
HinfI GANTC 7 cut(s) 508, 629, 656, 752, 808, 1382, 1439
HpaII CCGG 4 cut(s) 83, 428, 434, 564
HphI GGTGA 4 cut(s) 72, 619, 788, 1415
Hpy166II GTNNAC 2 cut(s) 685, 1220
Hpy188I TCNGA 8 cut(s) 91, 110, 128, 240, 349, 623, 832, 934
Hpy188III TCNNGA 8 cut(s) 116, 166, 250, 456, 488, 889, 925, 1386
Hpy8I GTNNAC 2 cut(s) 685, 1220
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 3 cut(s) 1078, 1237, 1344
HpyCH4IV ACGT 1 cut(s) 1278
HpyF10VI GCNNNNNNNGC 1 cut(s) 1185
HpyF3I CTNAG 5 cut(s) 274, 348, 829, 1059, 1095
HpySE526I ACGT 1 cut(s) 1278
Hsp92II CATG 6 cut(s) 214, 655, 767, 958, 1259, 1511
HspAI GCGC 2 cut(s) 472, 972
Kzo9I GATC 5 cut(s) 334, 490, 601, 1329, 1393
LmnI GCTCC 1 cut(s) 430
Lsp1109I GCAGC 3 cut(s) 706, 730, 961
LweI GCATC 4 cut(s) 56, 354, 1304, 1357
MaeI CTAG 1 cut(s) 1551
MaeII ACGT 1 cut(s) 1278
MaeIII GTNAC 4 cut(s) 286, 950, 1375, 1432
MalI GATC 5 cut(s) 336, 492, 603, 1331, 1395
MboI GATC 5 cut(s) 334, 490, 601, 1329, 1393
MfeI CAATTG 1 cut(s) 512
MflI RGATCY 2 cut(s) 490, 1329
MhlI GDGCHC 3 cut(s) 531, 687, 860
MluCI AATT 8 cut(s) 328, 512, 548, 586, 845, 920, 1229, 1471
MlyI GAGTC 1 cut(s) 665
MmeI TCCRAC 3 cut(s) 684, 1188, 1261
Mph1103I ATGCAT 1 cut(s) 148
MseI TTAA 4 cut(s) 342, 551, 1103, 1131
MslI CAYNNNNRTG 1 cut(s) 967
MspI CCGG 4 cut(s) 83, 428, 434, 564
MspR9I CCNGG 1 cut(s) 565
MunI CAATTG 1 cut(s) 512
Mva1269I GAATGC 1 cut(s) 962
MwoI GCNNNNNNNGC 1 cut(s) 1185
NciI CCSGG 1 cut(s) 565
NdeII GATC 5 cut(s) 334, 490, 601, 1329, 1393
NlaIII CATG 6 cut(s) 214, 655, 767, 958, 1259, 1511
NlaIV GGNNCC 3 cut(s) 432, 859, 1169
NsiI ATGCAT 1 cut(s) 148
PctI GAATGC 1 cut(s) 962
PfeI GAWTC 6 cut(s) 508, 629, 752, 808, 1382, 1439
PflFI GACNNNGTC 2 cut(s) 1078, 1166
PinAI ACCGGT 1 cut(s) 82
PkrI GCNGC 3 cut(s) 721, 745, 976
PleI GAGTC 1 cut(s) 664
PpsI GAGTC 1 cut(s) 664
PpuMI RGGWCCY 1 cut(s) 1168
Psp5II RGGWCCY 1 cut(s) 1168
PspN4I GGNNCC 3 cut(s) 432, 859, 1169
PspPI GGNCC 3 cut(s) 124, 173, 1168
PspPPI RGGWCCY 1 cut(s) 1168
PsuI RGATCY 2 cut(s) 490, 1329
PsyI GACNNNGTC 2 cut(s) 1078, 1166
RsaI GTAC 2 cut(s) 203, 562
RsaNI GTAC 2 cut(s) 202, 561
RseI CAYNNNNRTG 1 cut(s) 967
SaqAI TTAA 4 cut(s) 342, 551, 1103, 1131
SatI GCNGC 3 cut(s) 720, 744, 975
Sau3AI GATC 5 cut(s) 334, 490, 601, 1329, 1393
Sau96I GGNCC 3 cut(s) 124, 173, 1168
SchI GAGTC 1 cut(s) 665
ScrFI CCNGG 1 cut(s) 565
SduI GDGCHC 3 cut(s) 531, 687, 860
SfaNI GCATC 4 cut(s) 56, 354, 1304, 1357
SfcI CTRYAG 2 cut(s) 1174, 1325
SgrAI CRCCGGYG 1 cut(s) 82
SinI GGWCC 3 cut(s) 124, 173, 1168
SmiMI CAYNNNNRTG 1 cut(s) 967
Sse9I AATT 8 cut(s) 328, 512, 548, 586, 845, 920, 1229, 1471
SsiI CCGC 4 cut(s) 192, 418, 911, 1186
SspI AATATT 1 cut(s) 1071
SspMI CTAG 1 cut(s) 1551
StyD4I CCNGG 1 cut(s) 563
StyI CCWWGG 1 cut(s) 518
TaiI ACGT 1 cut(s) 1281
TaqI TCGA 7 cut(s) 151, 167, 531, 666, 966, 1034, 1082
TaqII GACCGA 1 cut(s) 455
TasI AATT 8 cut(s) 328, 512, 548, 586, 845, 920, 1229, 1471
TfiI GAWTC 6 cut(s) 508, 629, 752, 808, 1382, 1439
Tru1I TTAA 4 cut(s) 342, 551, 1103, 1131
Tru9I TTAA 4 cut(s) 342, 551, 1103, 1131
TscAI CASTG 4 cut(s) 22, 163, 320, 1241
TseI GCWGC 3 cut(s) 719, 743, 974
TspDTI ATGAA 8 cut(s) 24, 39, 199, 744, 780, 1031, 1143, 1256
TspRI CASTG 4 cut(s) 22, 163, 320, 1241
Tth111I GACNNNGTC 2 cut(s) 1078, 1166
VneI GTGCAC 1 cut(s) 683
VpaK11BI GGWCC 3 cut(s) 124, 173, 1168
XagI CCTNNNNNAGG 1 cut(s) 1458
XapI RAATTY 4 cut(s) 586, 845, 920, 1229
XspI CTAG 1 cut(s) 1551
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.