Rw3G029170

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000188
Physical Location & Seq
Forward (+)
44610317 .. 44611624
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G029170.1

Sequence Viewer

Length: 1308 bp
ATGACTGACATATGTAAAAGAACCTGCTTCACTGAAGAGCTTTTGGAGGCCCAATCACCTTTGACTTGTTCATGTAGCATATTCAGAGTTCCCCAGGTGCTACGAAGACGAAAAGTGAAGGCATACAAACCTGACATAGTCTCAATCGGGCCCCTTCACCGAGGTGCTGACGAAGAATTTCAAATCGTGGAAAATGTGAAAAAATGGTATTTAAAATGTTTTCTCGTGCGCCAGCAACCGAACCCGACAGGACTGAGTATGTCGGACGTGGAGACGTTGACTGAAGAGATCAAGGGACAGGAACTGGATAAACGCGCCCGGCATTGTTATCCAGACCGATGCAATCATCTTGACCAAAACGACTTCATACAGATGCTCATACTCGATGGTTGTTTCTTGATAGAATTATTTCGGAAGGCACAATCGGTAATGCGACAAGACAATGACGACCCTATTTTCAACGTGCCTTATATGCTCGAATATTTATACCACGATCTTCTGTTACTCGAAAATCAGCTTCCCTGGTTTGTGCTCGAGTTTTTCTATAATCTAATTGAGAGTGGCAACACTAACTCTCTCAGTAAATTGGTATTAGACTTCTTCAAAAATTCAGTGGCTGATGCCGAAATTTTGAGGAACCCCGATCCCAACTCTTCTGGTATGATTCTTCACATACTTGATTTTATTAGAACTGCCCTCGTTCCAACCCCAAGTTTGACAGCTGCCCACGAACGAGACAACCACCTCCCGCAAAGGATACCTAGTGTCACTGCTCTTTCAGACGTAGGAGTTAAATTTAAAAAGGGCCGCCCAGGTTGCATATTCGACATAACGTTCAAAGGTGGCGTTTTCACCATTCCTCCTCTGGCTATCAATGAGAGGACTGGTCATTTGTTCAGTAACCTTATGGCCTTCGAGCTGTGCTATCACAGTTGCACGCACAAGATAATATCCTATGCGGTCTTGATGACTTACCTCATCGATACGAAAAATGATGCGGATCTTCTAAGTGAGGAAAATATAGTAGCCAACTTGGATGATATCGATGCTTCAAAGTTCTTCAAAGATCTAACCAATGACACCAGAGTCATTGATTTTGTCTACGAGGGACTCTGCGAAGAAGTGCATAAATATCTCAAAGCTCCACAGAACAGGATACCATGGAACAAGTGGAGCAAGAAATTGAGACGTGATTATTTTGAGACACCATGGTCTACTATCTCTTTTTTTGCTGCTTTTGTTCTCCTGGTCCTAACCTTCTTGCAGACCGTATACACAGTCCAGCAATACTATCATTCTCCCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

435

Amino Acids

50.38

Weight (kDa)

5.87

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 27 - 418 6.3e-103 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1085, 1210
Acc36I ACCTGC 1 cut(s) 32
AccI GTMKAC 3 cut(s) 1101, 1214, 1272
AccII CGCG 1 cut(s) 315
AciI CCGC 4 cut(s) 749, 808, 959, 998
AclI AACGTT 1 cut(s) 833
AclWI GGATC 2 cut(s) 638, 1008
AcsI RAATTY 4 cut(s) 176, 607, 627, 794
AcuI CTGAAG 2 cut(s) 54, 303
AgsI TTSAA 6 cut(s) 182, 460, 604, 838, 1053, 1063
AjiI CACGTC 2 cut(s) 268, 1190
AjnI CCWGG 4 cut(s) 93, 521, 811, 1245
AleI CACNNNNGTG 1 cut(s) 162
AluBI AGCT 5 cut(s) 40, 517, 722, 919, 1142
AluI AGCT 5 cut(s) 40, 517, 722, 919, 1142
Alw21I GWGCWC 1 cut(s) 534
Alw26I GTCTC 5 cut(s) 145, 266, 729, 1180, 1196
AlwI GGATC 2 cut(s) 638, 1008
AlwNI CAGNNNCTG 2 cut(s) 304, 617
Ama87I CYCGRG 1 cut(s) 533
AoxI GGCC 4 cut(s) 48, 149, 805, 909
ApaI GGGCCC 1 cut(s) 153
ApeKI GCWGC 2 cut(s) 722, 1232
ApoI RAATTY 4 cut(s) 176, 607, 627, 794
ArsI GACNNNNNNTTYG 2 cut(s) 874, 906
Asp700I GAANNNNTTC 2 cut(s) 177, 408
AspLEI GCGC 2 cut(s) 231, 317
AspS9I GGNCC 5 cut(s) 49, 149, 150, 805, 1249
AsuC2I CCSGG 1 cut(s) 319
AsuHPI GGTGA 3 cut(s) 48, 149, 844
AvaI CYCGRG 1 cut(s) 533
AvaII GGWCC 1 cut(s) 1249
BaeGI GKGCMC 1 cut(s) 153
BanII GRGCYC 1 cut(s) 153
BauI CACGAG 1 cut(s) 224
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 1 cut(s) 534
BbvI GCAGC 2 cut(s) 709, 1219
BccI CCATC 1 cut(s) 380
BciT130I CCWGG 4 cut(s) 95, 523, 813, 1247
BciVI GTATCC 2 cut(s) 750, 1149
BcnI CCSGG 1 cut(s) 319
BcoDI GTCTC 5 cut(s) 145, 266, 729, 1180, 1196
BfaI CTAG 1 cut(s) 762
BfuAI ACCTGC 1 cut(s) 32
BfuI GTATCC 2 cut(s) 750, 1149
BglII AGATCT 1 cut(s) 1066
BisI GCNGC 3 cut(s) 723, 808, 1233
BlsI GCNGC 3 cut(s) 724, 809, 1234
Bme1390I CCNGG 5 cut(s) 95, 319, 523, 813, 1247
Bme18I GGWCC 1 cut(s) 1249
BmeT110I CYCGRG 1 cut(s) 533
BmgBI CACGTC 2 cut(s) 268, 1190
BmgT120I GGNCC 5 cut(s) 49, 149, 150, 805, 1249
BmiI GGNNCC 3 cut(s) 151, 152, 638
BmrFI CCNGG 5 cut(s) 95, 319, 523, 813, 1247
BmsI GCATC 5 cut(s) 329, 363, 610, 985, 1036
BpiI GAAGAC 1 cut(s) 112
BpuMI CCSGG 1 cut(s) 319
Bsa29I ATCGAT 2 cut(s) 981, 1044
BsaBI GATNNNNATC 1 cut(s) 999
BsaJI CCNNGG 6 cut(s) 93, 160, 521, 811, 1160, 1208
BsaXI ACNNNNNCTCC 2 cut(s) 844, 874
Bse1I ACTGG 2 cut(s) 309, 889
Bse8I GATNNNNATC 1 cut(s) 999
BseBI CCWGG 4 cut(s) 95, 523, 813, 1247
BseCI ATCGAT 2 cut(s) 981, 1044
BseDI CCNNGG 6 cut(s) 93, 160, 521, 811, 1160, 1208
BseGI GGATG 1 cut(s) 1042
BseJI GATNNNNATC 1 cut(s) 999
BseMII CTCAG 2 cut(s) 245, 592
BseNI ACTGG 2 cut(s) 309, 889
BseRI GAGGAG 1 cut(s) 852
BseSI GKGCMC 1 cut(s) 153
BseXI GCAGC 2 cut(s) 709, 1219
Bsh1236I CGCG 1 cut(s) 315
BshFI GGCC 4 cut(s) 50, 151, 807, 911
BshVI ATCGAT 2 cut(s) 981, 1044
BsiHKAI GWGCWC 1 cut(s) 534
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 1 cut(s) 319
BslFI GGGAC 2 cut(s) 309, 1122
BsmAI GTCTC 5 cut(s) 145, 266, 729, 1180, 1196
BsmBI CGTCTC 2 cut(s) 266, 1180
BsmFI GGGAC 2 cut(s) 309, 1122
BsnI GGCC 4 cut(s) 50, 151, 807, 911
BsoBI CYCGRG 1 cut(s) 533
Bsp120I GGGCCC 1 cut(s) 149
Bsp1286I GDGCHC 2 cut(s) 153, 534
Bsp143I GATC 5 cut(s) 288, 493, 643, 1000, 1066
Bsp19I CCATGG 2 cut(s) 1160, 1208
BspACI CCGC 4 cut(s) 749, 808, 959, 998
BspANI GGCC 4 cut(s) 50, 151, 807, 911
BspCNI CTCAG 2 cut(s) 246, 591
BspDI ATCGAT 2 cut(s) 981, 1044
BspFNI CGCG 1 cut(s) 315
BspLI GGNNCC 3 cut(s) 151, 152, 638
BspMI ACCTGC 1 cut(s) 32
BspPI GGATC 2 cut(s) 638, 1008
BspQI GCTCTTC 1 cut(s) 30
BsrI ACTGG 2 cut(s) 309, 889
BssECI CCNNGG 6 cut(s) 93, 160, 521, 811, 1160, 1208
BssMI GATC 5 cut(s) 288, 493, 643, 1000, 1066
BssNAI GTATAC 1 cut(s) 1273
BssSI CACGAG 1 cut(s) 224
BssT1I CCWWGG 2 cut(s) 1160, 1208
Bst1107I GTATAC 1 cut(s) 1273
Bst2BI CACGAG 1 cut(s) 224
Bst2UI CCWGG 4 cut(s) 95, 523, 813, 1247
Bst4CI ACNGT 3 cut(s) 932, 1270, 1279
Bst6I CTCTTC 3 cut(s) 30, 279, 658
BstC8I GCNNGC 2 cut(s) 233, 938
BstDEI CTNAG 3 cut(s) 254, 578, 1007
BstDSI CCRYGG 2 cut(s) 1160, 1208
BstF5I GGATG 1 cut(s) 1042
BstFNI CGCG 1 cut(s) 315
BstHHI GCGC 2 cut(s) 231, 317
BstKTI GATC 5 cut(s) 291, 496, 646, 1003, 1069
BstMAI GTCTC 5 cut(s) 145, 266, 729, 1180, 1196
BstMBI GATC 5 cut(s) 288, 493, 643, 1000, 1066
BstMWI GCNNNNNNNGC 2 cut(s) 472, 816
BstNI CCWGG 4 cut(s) 95, 523, 813, 1247
BstSCI CCNGG 5 cut(s) 93, 317, 521, 811, 1245
BstSLI GKGCMC 1 cut(s) 153
BstUI CGCG 1 cut(s) 315
BstV1I GCAGC 2 cut(s) 709, 1219
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 2 cut(s) 1000, 1066
BstYI RGATCY 2 cut(s) 1000, 1066
BstZ17I GTATAC 1 cut(s) 1273
Bsu15I ATCGAT 2 cut(s) 981, 1044
BsuI GTATCC 2 cut(s) 750, 1149
BsuRI GGCC 4 cut(s) 50, 151, 807, 911
BsuTUI ATCGAT 2 cut(s) 981, 1044
BtgI CCRYGG 2 cut(s) 1160, 1208
BtrI CACGTC 2 cut(s) 268, 1190
BtsCI GGATG 1 cut(s) 1042
BtsI GCAGTG 1 cut(s) 768
BtsIMutI CAGTG 3 cut(s) 30, 618, 768
BveI ACCTGC 1 cut(s) 32
Cac8I GCNNGC 2 cut(s) 233, 938
CaiI CAGNNNCTG 2 cut(s) 304, 617
CfoI GCGC 2 cut(s) 231, 317
Cfr13I GGNCC 5 cut(s) 49, 149, 150, 805, 1249
ClaI ATCGAT 2 cut(s) 981, 1044
CviAII CATG 3 cut(s) 72, 1161, 1209
DdeI CTNAG 3 cut(s) 254, 578, 1007
DpnI GATC 5 cut(s) 290, 495, 645, 1002, 1068
DpnII GATC 5 cut(s) 288, 493, 643, 1000, 1066
DraI TTTAAA 2 cut(s) 213, 799
DrdI GACNNNNNNGTC 2 cut(s) 1085, 1210
DseDI GACNNNNNNGTC 2 cut(s) 1085, 1210
Eam1104I CTCTTC 3 cut(s) 30, 279, 658
EarI CTCTTC 3 cut(s) 30, 279, 658
Eco130I CCWWGG 2 cut(s) 1160, 1208
Eco24I GRGCYC 1 cut(s) 153
Eco32I GATATC 1 cut(s) 1042
Eco47I GGWCC 1 cut(s) 1249
Eco57I CTGAAG 2 cut(s) 54, 303
Eco88I CYCGRG 1 cut(s) 533
EcoO109I RGGNCCY 1 cut(s) 150
EcoRII CCWGG 4 cut(s) 93, 521, 811, 1245
EcoRV GATATC 1 cut(s) 1042
EcoT14I CCWWGG 2 cut(s) 1160, 1208
EcoT38I GRGCYC 1 cut(s) 153
ErhI CCWWGG 2 cut(s) 1160, 1208
Esp3I CGTCTC 2 cut(s) 266, 1180
FaeI CATG 3 cut(s) 75, 1164, 1212
FaqI GGGAC 2 cut(s) 309, 1122
FatI CATG 3 cut(s) 71, 1160, 1208
FauI CCCGC 1 cut(s) 756
FauNDI CATATG 1 cut(s) 11
FblI GTMKAC 3 cut(s) 1101, 1214, 1272
Fnu4HI GCNGC 3 cut(s) 723, 808, 1233
FokI GGATG 1 cut(s) 1049
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 3 cut(s) 723, 808, 1233
FspBI CTAG 1 cut(s) 762
GlaI GCGC 2 cut(s) 230, 316
GluI GCNGC 3 cut(s) 723, 808, 1233
HaeIII GGCC 4 cut(s) 50, 151, 807, 911
HapII CCGG 1 cut(s) 319
HhaI GCGC 2 cut(s) 231, 317
Hin1II CATG 3 cut(s) 75, 1164, 1212
Hin6I GCGC 2 cut(s) 229, 315
HinP1I GCGC 2 cut(s) 229, 315
HincII GTYRAC 1 cut(s) 279
HindII GTYRAC 1 cut(s) 279
HinfI GANTC 3 cut(s) 664, 1086, 1110
HpaII CCGG 1 cut(s) 319
HphI GGTGA 3 cut(s) 48, 149, 844
Hpy166II GTNNAC 4 cut(s) 279, 1102, 1215, 1273
Hpy188I TCNGA 4 cut(s) 86, 265, 414, 781
Hpy188III TCNNGA 4 cut(s) 332, 350, 397, 964
Hpy8I GTNNAC 4 cut(s) 279, 1102, 1215, 1273
HpyAV CCTTC 5 cut(s) 112, 164, 409, 922, 1267
HpyCH4III ACNGT 3 cut(s) 932, 1270, 1279
HpyCH4IV ACGT 6 cut(s) 267, 275, 462, 783, 833, 1189
HpyCH4V TGCA 5 cut(s) 342, 819, 936, 1126, 1264
HpyF10VI GCNNNNNNNGC 2 cut(s) 472, 816
HpyF3I CTNAG 3 cut(s) 254, 578, 1007
HpySE526I ACGT 6 cut(s) 267, 275, 462, 783, 833, 1189
Hsp92II CATG 3 cut(s) 75, 1164, 1212
HspAI GCGC 2 cut(s) 229, 315
Kzo9I GATC 5 cut(s) 288, 493, 643, 1000, 1066
LguI GCTCTTC 1 cut(s) 30
LmnI GCTCC 2 cut(s) 1147, 1173
Lsp1109I GCAGC 2 cut(s) 709, 1219
LweI GCATC 5 cut(s) 329, 363, 610, 985, 1036
MaeI CTAG 1 cut(s) 762
MaeII ACGT 6 cut(s) 267, 275, 462, 783, 833, 1189
MaeIII GTNAC 3 cut(s) 501, 766, 899
MalI GATC 5 cut(s) 290, 495, 645, 1002, 1068
MboI GATC 5 cut(s) 288, 493, 643, 1000, 1066
MflI RGATCY 2 cut(s) 1000, 1066
MhlI GDGCHC 2 cut(s) 153, 534
MluCI AATT 9 cut(s) 176, 404, 552, 584, 607, 627, 794, 1181, 1303
MlyI GAGTC 2 cut(s) 1095, 1104
MmeI TCCRAC 2 cut(s) 243, 728
MroXI GAANNNNTTC 2 cut(s) 177, 408
MseI TTAA 4 cut(s) 212, 792, 798, 1306
MslI CAYNNNNRTG 2 cut(s) 162, 371
MspA1I CMGCKG 1 cut(s) 722
MspI CCGG 1 cut(s) 319
MspR9I CCNGG 5 cut(s) 95, 319, 523, 813, 1247
MvaI CCWGG 4 cut(s) 95, 523, 813, 1247
MvnI CGCG 1 cut(s) 315
MwoI GCNNNNNNNGC 2 cut(s) 472, 816
NciI CCSGG 1 cut(s) 319
NcoI CCATGG 2 cut(s) 1160, 1208
NdeI CATATG 1 cut(s) 11
NdeII GATC 5 cut(s) 288, 493, 643, 1000, 1066
NlaIII CATG 3 cut(s) 75, 1164, 1212
NlaIV GGNNCC 3 cut(s) 151, 152, 638
NmuCI GTSAC 1 cut(s) 766
OliI CACNNNNGTG 1 cut(s) 162
PaeR7I CTCGAG 1 cut(s) 533
PciSI GCTCTTC 1 cut(s) 30
PdmI GAANNNNTTC 2 cut(s) 177, 408
PfeI GAWTC 1 cut(s) 664
PflFI GACNNNGTC 1 cut(s) 137
PkrI GCNGC 3 cut(s) 724, 809, 1234
PleI GAGTC 2 cut(s) 1094, 1104
PpsI GAGTC 2 cut(s) 1094, 1104
Psp1406I AACGTT 1 cut(s) 833
Psp6I CCWGG 4 cut(s) 93, 521, 811, 1245
PspGI CCWGG 4 cut(s) 93, 521, 811, 1245
PspN4I GGNNCC 3 cut(s) 151, 152, 638
PspOMI GGGCCC 1 cut(s) 149
PspPI GGNCC 5 cut(s) 49, 149, 150, 805, 1249
PspXI VCTCGAGB 1 cut(s) 533
PstNI CAGNNNCTG 2 cut(s) 304, 617
PsuI RGATCY 2 cut(s) 1000, 1066
PsyI GACNNNGTC 1 cut(s) 137
PvuII CAGCTG 1 cut(s) 722
RseI CAYNNNNRTG 2 cut(s) 162, 371
SapI GCTCTTC 1 cut(s) 30
SaqAI TTAA 4 cut(s) 212, 792, 798, 1306
SatI GCNGC 3 cut(s) 723, 808, 1233
Sau3AI GATC 5 cut(s) 288, 493, 643, 1000, 1066
Sau96I GGNCC 5 cut(s) 49, 149, 150, 805, 1249
SchI GAGTC 2 cut(s) 1095, 1104
ScrFI CCNGG 5 cut(s) 95, 319, 523, 813, 1247
SduI GDGCHC 2 cut(s) 153, 534
SfaNI GCATC 5 cut(s) 329, 363, 610, 985, 1036
Sfr274I CTCGAG 1 cut(s) 533
SinI GGWCC 1 cut(s) 1249
SlaI CTCGAG 1 cut(s) 533
SmiMI CAYNNNNRTG 2 cut(s) 162, 371
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
Sse9I AATT 9 cut(s) 176, 404, 552, 584, 607, 627, 794, 1181, 1303
SsiI CCGC 4 cut(s) 749, 808, 959, 998
SspI AATATT 1 cut(s) 482
SspMI CTAG 1 cut(s) 762
StyD4I CCNGG 5 cut(s) 93, 317, 521, 811, 1245
StyI CCWWGG 2 cut(s) 1160, 1208
TaaI ACNGT 3 cut(s) 932, 1270, 1279
TaiI ACGT 6 cut(s) 270, 278, 465, 786, 836, 1192
TaqI TCGA 8 cut(s) 384, 477, 507, 534, 825, 915, 981, 1044
TaqII GACCGA 1 cut(s) 351
TasI AATT 9 cut(s) 176, 404, 552, 584, 607, 627, 794, 1181, 1303
TauI GCSGC 1 cut(s) 810
TfiI GAWTC 1 cut(s) 664
Tru1I TTAA 4 cut(s) 212, 792, 798, 1306
Tru9I TTAA 4 cut(s) 212, 792, 798, 1306
TscAI CASTG 3 cut(s) 37, 618, 775
TseFI GTSAC 1 cut(s) 766
TseI GCWGC 2 cut(s) 722, 1232
Tsp45I GTSAC 1 cut(s) 766
TspDTI ATGAA 2 cut(s) 60, 355
TspRI CASTG 3 cut(s) 37, 618, 775
Tth111I GACNNNGTC 1 cut(s) 137
VpaK11BI GGWCC 1 cut(s) 1249
XapI RAATTY 4 cut(s) 176, 607, 627, 794
XcmI CCANNNNNNNNNTGG 2 cut(s) 862, 1167
XhoI CTCGAG 1 cut(s) 533
XmiI GTMKAC 3 cut(s) 1101, 1214, 1272
XmnI GAANNNNTTC 2 cut(s) 177, 408
XspI CTAG 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.