MD09G1013700.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000188
Physical Location & Seq
Reverse (-)
885481 .. 886812
1332 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1013700.v1.1.491

Sequence Viewer

Length: 1332 bp
ATGAAAAATGAGAGAGAAATTAGCGAAGTTGATGACAGTACTGACAAGACATCCGTTCCTATAAATGGTATTGTGGGAGAATTGACAACCAACATCGCACTAAAGCTACTCCATGTTTCGCCATTGCCAGCATCCTGCTGCATCTTCAGAGTTCCCCTCCAGATTCGGCGAAAAAACGCACAAGCATACAAACCTTACGTCATCTCAATCGGACCCTTTCACCGTGGCGGTGGTGGCGATCAATTCCAACTCTTGGAAAATGTGAAGCGCTGGTACTTACAGTGCCTTCTTTCACACGCAAAAACAACTTTGCCAGGCTTGATCGAAGGTGTCGCGGATTTGGAAAAGCACGCTCGTGATTGTTACGCAGAGCCATTGGGTCTCAACAAGGAAGACTTTGTTGAGATGATGGTACTCGACGGATGCTTCCTAATCGAACTATTTCGAAAAGGACCTTCCCACGATCTACCAGACGAGAAGGACCCCGTTCACTGTATGTCCGGCATTCGGCTATATCTTTACCATGACCTTCTCCTGCTAGAAAATCAGCTGCCATGGTTTGTTCTCGAGCGGTTATACAATTTAACCGCCGTGAAGAGTACTACTAGCGAAGGAAATGCCTCCTCCCTCGCCGACCTTGTCCTCAAGTTCTTCACAGAATACGTCGGGGACAATCTCATTTTAAACCCGAGTGTGGATCTCCGTCCTGAAATCCTGCACATACTCGGTCTCATAAGAACCTCAGTCATTGGCACTTTTAAACACGAGAGCACGGGGAATAAGATGCCGAAGGTTCCAAACGTGACAACTCTGTCCGAAGCTGGCATTAAATTCAAAGAAGGTCCTCGGGGTGACATGTTGAAAATGAAGTTCGAAAAAGGGGAGTTCACCATGCCACAACTAGTAATCGATGAGCGGACAGGGCCGCTCCTCAGGAACCTCATCGCCTTCGAGCAATGCTACCCCAACTGCCTCCACACGATAACGAGTTACGCCGTCCTGATGGATAATCTCATCAATTCGAGCAAGGACATCGACCTTCTTTGCGAGAGGAAAATACTGGTGAATTGGTTGAGCTCGGAAGACGCTGCGCAGTTCTTCAACGAACTGTACAACGAGACGACGGTCATGGGATCCTGCTACGGGAAACTCTGCGAGGATGTGAATAAGCATTACAACACTAACTGGAACAAGTGGATGGAAAAGCTGAGGCGCGAGCATTTTAATTCGCCGTGGGCGATTATTTCTTTGGTTGCGGCGTTTATTCTGCTGGTTCTCACAGTGTTGCAGACATATTATACAATTCATCCGTATTATTATCCTCCTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

444

Amino Acids

50.48

Weight (kDa)

6.03

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 48 - 426 2.1e-112 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 811
Acc16I TGCGCA 1 cut(s) 1092
AccB7I CCANNNNNTGG 1 cut(s) 253
AccBSI CCGCTC 3 cut(s) 571, 916, 928
AccII CGCG 2 cut(s) 335, 1215
AciI CCGC 7 cut(s) 228, 335, 571, 588, 916, 926, 1256
AclWI GGATC 3 cut(s) 705, 1128, 1141
AcsI RAATTY 1 cut(s) 830
AcuI CTGAAG 1 cut(s) 130
AfaI GTAC 5 cut(s) 40, 275, 414, 601, 1112
AfeI AGCGCT 1 cut(s) 269
AfiI CCNNNNNNNGG 5 cut(s) 65, 253, 507, 694, 1143
AflIII ACRYGT 1 cut(s) 855
AgsI TTSAA 3 cut(s) 835, 862, 1102
AhlI ACTAGT 1 cut(s) 901
AjnI CCWGG 1 cut(s) 313
AleI CACNNNNGTG 1 cut(s) 354
AluBI AGCT 5 cut(s) 106, 550, 821, 1077, 1207
AluI AGCT 5 cut(s) 106, 550, 821, 1077, 1207
Alw21I GWGCWC 2 cut(s) 773, 1079
Alw26I GTCTC 3 cut(s) 386, 734, 1112
AlwI GGATC 3 cut(s) 705, 1128, 1141
Ama87I CYCGRG 3 cut(s) 566, 688, 846
Aor51HI AGCGCT 1 cut(s) 269
AoxI GGCC 1 cut(s) 923
ApeKI GCWGC 3 cut(s) 138, 550, 1088
ApoI RAATTY 1 cut(s) 830
ArsI GACNNNNNNTTYG 2 cut(s) 183, 215
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 3 cut(s) 270, 1093, 1215
AspS9I GGNCC 5 cut(s) 212, 452, 481, 842, 923
AsuHPI GGTGA 4 cut(s) 212, 863, 880, 1075
AsuII TTCGAA 2 cut(s) 445, 873
AvaI CYCGRG 3 cut(s) 566, 688, 846
AvaII GGWCC 4 cut(s) 212, 452, 481, 842
AxyI CCTNAGG 1 cut(s) 932
BamHI GGATCC 1 cut(s) 1133
BanII GRGCYC 1 cut(s) 1079
BarI GAAGNNNNNNTAC 2 cut(s) 257, 289
BauI CACGAG 2 cut(s) 354, 764
BbsI GAAGAC 2 cut(s) 399, 1089
Bbv12I GWGCWC 2 cut(s) 773, 1079
BbvCI CCTCAGC 1 cut(s) 1208
BbvI GCAGC 3 cut(s) 125, 537, 1075
BccI CCATC 3 cut(s) 403, 997, 1192
BceAI ACGGC 3 cut(s) 575, 980, 1216
BcgI CGANNNNNNTGC 4 cut(s) 599, 633, 1015, 1049
BciT130I CCWGG 1 cut(s) 315
BcoDI GTCTC 3 cut(s) 386, 734, 1112
BcuI ACTAGT 1 cut(s) 901
BfaI CTAG 3 cut(s) 539, 606, 902
BfoI RGCGCY 1 cut(s) 271
BisI GCNGC 5 cut(s) 139, 551, 926, 1089, 1257
BlsI GCNGC 5 cut(s) 140, 552, 927, 1090, 1258
BmcAI AGTACT 2 cut(s) 40, 601
Bme1390I CCNGG 1 cut(s) 315
Bme18I GGWCC 4 cut(s) 212, 452, 481, 842
BmeT110I CYCGRG 3 cut(s) 566, 688, 846
BmgT120I GGNCC 5 cut(s) 212, 452, 481, 842, 923
BmiI GGNNCC 5 cut(s) 214, 483, 795, 938, 1135
BmrFI CCNGG 1 cut(s) 315
BmsI GCATC 4 cut(s) 140, 150, 413, 774
BoxI GACNNNNGTC 1 cut(s) 1124
BpiI GAAGAC 2 cut(s) 399, 1089
BplI GAGNNNNNCTC 2 cut(s) 141, 173
BpmI CTGGAG 1 cut(s) 143
Bpu10I CCTNAGC 1 cut(s) 1208
Bpu14I TTCGAA 2 cut(s) 445, 873
BpuEI CTTGAG 1 cut(s) 629
Bsa29I ATCGAT 1 cut(s) 909
BsaI GGTCTC 2 cut(s) 386, 734
BsaJI CCNNGG 4 cut(s) 223, 554, 845, 1232
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 253, 507, 694, 1143
Bse1I ACTGG 2 cut(s) 1065, 1190
Bse21I CCTNAGG 1 cut(s) 932
Bse3DI GCAATG 2 cut(s) 122, 962
BseBI CCWGG 1 cut(s) 315
BseCI ATCGAT 1 cut(s) 909
BseDI CCNNGG 4 cut(s) 223, 554, 845, 1232
BseGI GGATG 6 cut(s) 50, 131, 428, 1165, 1203, 1306
BseLI CCNNNNNNNGG 5 cut(s) 65, 253, 507, 694, 1143
BseMI GCAATG 2 cut(s) 122, 962
BseMII CTCAG 3 cut(s) 756, 946, 1199
BseNI ACTGG 2 cut(s) 1065, 1190
BseRI GAGGAG 2 cut(s) 613, 920
BseXI GCAGC 3 cut(s) 125, 537, 1075
BsgI GTGCAG 1 cut(s) 701
Bsh1236I CGCG 2 cut(s) 335, 1215
BshFI GGCC 1 cut(s) 925
BshVI ATCGAT 1 cut(s) 909
BsiHKAI GWGCWC 2 cut(s) 773, 1079
BsiHKCI CYCGRG 3 cut(s) 566, 688, 846
BsiSI CCGG 1 cut(s) 501
BslFI GGGAC 1 cut(s) 683
BslI CCNNNNNNNGG 5 cut(s) 65, 253, 507, 694, 1143
BsmAI GTCTC 3 cut(s) 386, 734, 1112
BsmBI CGTCTC 1 cut(s) 1112
BsmFI GGGAC 1 cut(s) 683
BsmI GAATGC 1 cut(s) 504
BsnI GGCC 1 cut(s) 925
Bso31I GGTCTC 2 cut(s) 386, 734
BsoBI CYCGRG 3 cut(s) 566, 688, 846
Bsp119I TTCGAA 2 cut(s) 445, 873
Bsp1286I GDGCHC 2 cut(s) 773, 1079
Bsp1407I TGTACA 1 cut(s) 1110
Bsp143I GATC 5 cut(s) 238, 321, 463, 697, 1133
Bsp19I CCATGG 1 cut(s) 554
BspACI CCGC 7 cut(s) 228, 335, 571, 588, 916, 926, 1256
BspANI GGCC 1 cut(s) 925
BspCNI CTCAG 3 cut(s) 755, 945, 1200
BspDI ATCGAT 1 cut(s) 909
BspFNI CGCG 2 cut(s) 335, 1215
BspLI GGNNCC 5 cut(s) 214, 483, 795, 938, 1135
BspPI GGATC 3 cut(s) 705, 1128, 1141
BspT104I TTCGAA 2 cut(s) 445, 873
BspTNI GGTCTC 2 cut(s) 386, 734
BsrBI CCGCTC 3 cut(s) 571, 916, 928
BsrDI GCAATG 2 cut(s) 122, 962
BsrGI TGTACA 1 cut(s) 1110
BsrI ACTGG 2 cut(s) 1065, 1190
BssECI CCNNGG 4 cut(s) 223, 554, 845, 1232
BssMI GATC 5 cut(s) 238, 321, 463, 697, 1133
BssSI CACGAG 2 cut(s) 354, 764
BssT1I CCWWGG 1 cut(s) 554
Bst2BI CACGAG 2 cut(s) 354, 764
Bst2UI CCWGG 1 cut(s) 315
Bst4CI ACNGT 7 cut(s) 38, 224, 282, 494, 1110, 1126, 1282
Bst6I CTCTTC 1 cut(s) 590
BstAUI TGTACA 1 cut(s) 1110
BstBI TTCGAA 2 cut(s) 445, 873
BstC8I GCNNGC 4 cut(s) 129, 351, 823, 1217
BstDEI CTNAG 4 cut(s) 742, 932, 1208, 1326
BstDSI CCRYGG 3 cut(s) 223, 554, 1232
BstF5I GGATG 6 cut(s) 50, 131, 428, 1165, 1203, 1306
BstFNI CGCG 2 cut(s) 335, 1215
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 3 cut(s) 270, 1093, 1215
BstKTI GATC 5 cut(s) 241, 324, 466, 700, 1136
BstMAI GTCTC 3 cut(s) 386, 734, 1112
BstMBI GATC 5 cut(s) 238, 321, 463, 697, 1133
BstMWI GCNNNNNNNGC 2 cut(s) 234, 922
BstNI CCWGG 1 cut(s) 315
BstNSI RCATGY 1 cut(s) 859
BstPAI GACNNNNGTC 1 cut(s) 1124
BstSCI CCNGG 1 cut(s) 313
BstUI CGCG 2 cut(s) 335, 1215
BstV1I GCAGC 3 cut(s) 125, 537, 1075
BstV2I GAAGAC 2 cut(s) 399, 1089
BstX2I RGATCY 2 cut(s) 697, 1133
BstYI RGATCY 2 cut(s) 697, 1133
Bsu15I ATCGAT 1 cut(s) 909
Bsu36I CCTNAGG 1 cut(s) 932
BsuRI GGCC 1 cut(s) 925
BsuTUI ATCGAT 1 cut(s) 909
BtgI CCRYGG 3 cut(s) 223, 554, 1232
BtgZI GCGATG 2 cut(s) 79, 928
BtsCI GGATG 6 cut(s) 50, 131, 428, 1165, 1203, 1306
BtsIMutI CAGTG 3 cut(s) 287, 490, 1287
Cac8I GCNNGC 4 cut(s) 129, 351, 823, 1217
CfoI GCGC 3 cut(s) 270, 1093, 1215
Cfr13I GGNCC 5 cut(s) 212, 452, 481, 842, 923
ClaI ATCGAT 1 cut(s) 909
CseI GACGC 1 cut(s) 1094
Csp6I GTAC 5 cut(s) 39, 274, 413, 600, 1111
CviAII CATG 6 cut(s) 113, 524, 555, 856, 892, 1129
CviJI RGCY 9 cut(s) 106, 318, 373, 511, 550, 821, 925, 1077, 1207
CviKI_1 RGCY 9 cut(s) 106, 318, 373, 511, 550, 821, 925, 1077, 1207
CviQI GTAC 5 cut(s) 39, 274, 413, 600, 1111
DdeI CTNAG 4 cut(s) 742, 932, 1208, 1326
DpnI GATC 5 cut(s) 240, 323, 465, 699, 1135
DpnII GATC 5 cut(s) 238, 321, 463, 697, 1133
DraI TTTAAA 2 cut(s) 684, 760
DrdI GACNNNNNNGTC 1 cut(s) 811
DseDI GACNNNNNNGTC 1 cut(s) 811
Eam1104I CTCTTC 1 cut(s) 590
EarI CTCTTC 1 cut(s) 590
Ecl136II GAGCTC 1 cut(s) 1077
Eco130I CCWWGG 1 cut(s) 554
Eco24I GRGCYC 1 cut(s) 1079
Eco31I GGTCTC 2 cut(s) 386, 734
Eco47I GGWCC 4 cut(s) 212, 452, 481, 842
Eco47III AGCGCT 1 cut(s) 269
Eco53kI GAGCTC 1 cut(s) 1077
Eco57I CTGAAG 1 cut(s) 130
Eco81I CCTNAGG 1 cut(s) 932
Eco88I CYCGRG 3 cut(s) 566, 688, 846
EcoICRI GAGCTC 1 cut(s) 1077
EcoO109I RGGNCCY 3 cut(s) 452, 481, 842
EcoRII CCWGG 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 554
EcoT38I GRGCYC 1 cut(s) 1079
ErhI CCWWGG 1 cut(s) 554
Esp3I CGTCTC 1 cut(s) 1112
FaeI CATG 6 cut(s) 116, 527, 558, 859, 895, 1132
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FaqI GGGAC 1 cut(s) 683
FatI CATG 6 cut(s) 112, 523, 554, 855, 891, 1128
Fnu4HI GCNGC 5 cut(s) 139, 551, 926, 1089, 1257
FokI GGATG 6 cut(s) 37, 118, 435, 1172, 1210, 1293
FriOI GRGCYC 1 cut(s) 1079
Fsp4HI GCNGC 5 cut(s) 139, 551, 926, 1089, 1257
FspBI CTAG 3 cut(s) 539, 606, 902
FspI TGCGCA 1 cut(s) 1092
GlaI GCGC 3 cut(s) 269, 1092, 1214
GluI GCNGC 5 cut(s) 139, 551, 926, 1089, 1257
GsuI CTGGAG 1 cut(s) 143
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 1 cut(s) 925
HapII CCGG 1 cut(s) 501
HgaI GACGC 1 cut(s) 1094
HhaI GCGC 3 cut(s) 270, 1093, 1215
Hin1II CATG 6 cut(s) 116, 527, 558, 859, 895, 1132
Hin6I GCGC 3 cut(s) 268, 1091, 1213
HinP1I GCGC 3 cut(s) 268, 1091, 1213
HinfI GANTC 1 cut(s) 163
HpaII CCGG 1 cut(s) 501
HphI GGTGA 4 cut(s) 212, 863, 880, 1075
Hpy166II GTNNAC 2 cut(s) 490, 888
Hpy188I TCNGA 4 cut(s) 149, 212, 817, 1081
Hpy188III TCNNGA 6 cut(s) 160, 356, 566, 707, 934, 1000
Hpy8I GTNNAC 2 cut(s) 490, 888
Hpy99I CGWCG 3 cut(s) 422, 668, 1126
HpyCH4III ACNGT 7 cut(s) 38, 224, 282, 494, 1110, 1126, 1282
HpyCH4IV ACGT 3 cut(s) 198, 663, 801
HpyCH4V TGCA 3 cut(s) 141, 718, 1288
HpyF10VI GCNNNNNNNGC 2 cut(s) 234, 922
HpyF3I CTNAG 4 cut(s) 742, 932, 1208, 1326
HpySE526I ACGT 3 cut(s) 198, 663, 801
Hsp92II CATG 6 cut(s) 116, 527, 558, 859, 895, 1132
HspAI GCGC 3 cut(s) 268, 1091, 1213
Kzo9I GATC 5 cut(s) 238, 321, 463, 697, 1133
LmnI GCTCC 1 cut(s) 933
Lsp1109I GCAGC 3 cut(s) 125, 537, 1075
LweI GCATC 4 cut(s) 140, 150, 413, 774
MaeI CTAG 3 cut(s) 539, 606, 902
MaeII ACGT 3 cut(s) 198, 663, 801
MaeIII GTNAC 4 cut(s) 362, 802, 851, 989
MalI GATC 5 cut(s) 240, 323, 465, 699, 1135
MbiI CCGCTC 3 cut(s) 571, 916, 928
MboI GATC 5 cut(s) 238, 321, 463, 697, 1133
MboII GAAGA 6 cut(s) 136, 404, 607, 643, 1090, 1094
MflI RGATCY 2 cut(s) 697, 1133
MhlI GDGCHC 2 cut(s) 773, 1079
MluCI AATT 9 cut(s) 18, 80, 242, 580, 830, 1018, 1066, 1225, 1302
MmeI TCCRAC 1 cut(s) 271
MroXI GAANNNNTTC 1 cut(s) 441
MseI TTAA 5 cut(s) 584, 683, 759, 828, 1224
MslI CAYNNNNRTG 1 cut(s) 354
MspA1I CMGCKG 1 cut(s) 550
MspI CCGG 1 cut(s) 501
MspR9I CCNGG 1 cut(s) 315
Mva1269I GAATGC 1 cut(s) 504
MvaI CCWGG 1 cut(s) 315
MvnI CGCG 2 cut(s) 335, 1215
MwoI GCNNNNNNNGC 2 cut(s) 234, 922
NcoI CCATGG 1 cut(s) 554
NdeII GATC 5 cut(s) 238, 321, 463, 697, 1133
NlaIII CATG 6 cut(s) 116, 527, 558, 859, 895, 1132
NlaIV GGNNCC 5 cut(s) 214, 483, 795, 938, 1135
NmuCI GTSAC 2 cut(s) 802, 851
NsbI TGCGCA 1 cut(s) 1092
NspI RCATGY 1 cut(s) 859
NspV TTCGAA 2 cut(s) 445, 873
OliI CACNNNNGTG 1 cut(s) 354
PaeR7I CTCGAG 1 cut(s) 566
PciI ACATGT 1 cut(s) 855
PcsI WCGNNNNNNNCGW 1 cut(s) 1235
PctI GAATGC 1 cut(s) 504
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 1 cut(s) 163
PflFI GACNNNGTC 1 cut(s) 638
PflMI CCANNNNNTGG 1 cut(s) 253
PkrI GCNGC 5 cut(s) 140, 552, 927, 1090, 1258
PpuMI RGGWCCY 3 cut(s) 452, 481, 842
PscI ACATGT 1 cut(s) 855
PshAI GACNNNNGTC 1 cut(s) 1124
Psp124BI GAGCTC 1 cut(s) 1079
Psp5II RGGWCCY 3 cut(s) 452, 481, 842
Psp6I CCWGG 1 cut(s) 313
PspGI CCWGG 1 cut(s) 313
PspN4I GGNNCC 5 cut(s) 214, 483, 795, 938, 1135
PspPI GGNCC 5 cut(s) 212, 452, 481, 842, 923
PspPPI RGGWCCY 3 cut(s) 452, 481, 842
PsuI RGATCY 2 cut(s) 697, 1133
PsyI GACNNNGTC 1 cut(s) 638
PvuII CAGCTG 1 cut(s) 550
RsaI GTAC 5 cut(s) 40, 275, 414, 601, 1112
RsaNI GTAC 5 cut(s) 39, 274, 413, 600, 1111
RseI CAYNNNNRTG 1 cut(s) 354
SacI GAGCTC 1 cut(s) 1079
SaqAI TTAA 5 cut(s) 584, 683, 759, 828, 1224
SatI GCNGC 5 cut(s) 139, 551, 926, 1089, 1257
Sau3AI GATC 5 cut(s) 238, 321, 463, 697, 1133
Sau96I GGNCC 5 cut(s) 212, 452, 481, 842, 923
ScaI AGTACT 2 cut(s) 40, 601
ScrFI CCNGG 1 cut(s) 315
SduI GDGCHC 2 cut(s) 773, 1079
SfaNI GCATC 4 cut(s) 140, 150, 413, 774
Sfr274I CTCGAG 1 cut(s) 566
SfuI TTCGAA 2 cut(s) 445, 873
SinI GGWCC 4 cut(s) 212, 452, 481, 842
SlaI CTCGAG 1 cut(s) 566
SmiMI CAYNNNNRTG 1 cut(s) 354
SmlI CTYRAG 2 cut(s) 566, 644
SmoI CTYRAG 2 cut(s) 566, 644
SpeI ACTAGT 1 cut(s) 901
Sse9I AATT 9 cut(s) 18, 80, 242, 580, 830, 1018, 1066, 1225, 1302
SsiI CCGC 7 cut(s) 228, 335, 571, 588, 916, 926, 1256
SspMI CTAG 3 cut(s) 539, 606, 902
SstI GAGCTC 1 cut(s) 1079
StyD4I CCNGG 1 cut(s) 313
StyI CCWWGG 1 cut(s) 554
TaaI ACNGT 7 cut(s) 38, 224, 282, 494, 1110, 1126, 1282
TaiI ACGT 3 cut(s) 201, 666, 804
TaqII GACCGA 1 cut(s) 716
TasI AATT 9 cut(s) 18, 80, 242, 580, 830, 1018, 1066, 1225, 1302
TatI WGTACW 3 cut(s) 38, 599, 1110
TauI GCSGC 2 cut(s) 928, 1259
TfiI GAWTC 1 cut(s) 163
Tru1I TTAA 5 cut(s) 584, 683, 759, 828, 1224
Tru9I TTAA 5 cut(s) 584, 683, 759, 828, 1224
TscAI CASTG 3 cut(s) 287, 497, 1287
TseFI GTSAC 2 cut(s) 802, 851
TseI GCWGC 3 cut(s) 138, 550, 1088
Tsp45I GTSAC 2 cut(s) 802, 851
TspDTI ATGAA 3 cut(s) 17, 881, 1295
TspGWI ACGGA 4 cut(s) 43, 435, 692, 1299
TspRI CASTG 3 cut(s) 287, 497, 1287
Tth111I GACNNNGTC 1 cut(s) 638
Van91I CCANNNNNTGG 1 cut(s) 253
VpaK11BI GGWCC 4 cut(s) 212, 452, 481, 842
XapI RAATTY 1 cut(s) 830
XceI RCATGY 1 cut(s) 859
XhoI CTCGAG 1 cut(s) 566
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 3 cut(s) 539, 606, 902
ZrmI AGTACT 2 cut(s) 40, 601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.