Rroxscaffold_5G00343150

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000188
Physical Location & Seq
Reverse (-)
12419181 .. 12421338
2158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00343150.1

Sequence Viewer

Length: 1347 bp
ATGGAAGACCATGGCAGTACAAATATTGATGTTGAAGCATTGGAACAGATGATGGAAGGAAAGCTTCGCAAGTATTCAGTCCTGTCTGCTAGCTGTTGCATTTTCAGAGTTCCTGAAGTGCTCCGGAGACATAAACCAGAGGCATATGCACCTGATGTTGTCTCAATCGGACCCTTTCATCACAGTAGCAGCAAACCTTTTGCAACCATGGAAGGTGTGAAACAGTTGTATTTAAAGGTTCTACTCTTGACAAAGAATATAAGTTTAAAAGCTTTGATCCAAGGTATTGATAATATTACTGGGTTTGAGAAACGCGCCCGTGATTATTATGCAGAATCACTTGATCATCTTAACCAGAATGACTTCATAGAAATGATGATAGTTGATGGCTGCTTCCTATTACAACTATTTCAGTCAACCTGTAGTTGCCCAAATTCAGGTGAGGTTAATGATCTCCTATCCAACATGGATTCCCTGGTCCAGTATGATTCAGATGACGATATTGATCCCATACTCAACATGAGTTGCATGGTCCAGTATCTATGCCATGATCTTCTGCTATTAGAAAATCAACTGCCTTGGTTTGTTCTCGAGTCTCTATATAACCTTATATGCGATAAACAAGTCCCCCTCACTAGGCTTGTGCTCGACTTCTTTAGCACACTATCATCACTGGAACCTTATCGTGACGGTTATTTTAAACACATTCATGATGAGAAAATTCTTCACATACTTGATCTGATCAGAAGTGCCATTGTTGTTCCTTTCAAAAAATTTGAATCAGAACATAGCAGCGAGACAAAACTGCCCCATGCAACTGCTCTCTTGGAGGCAGGCATTGAATTCAGAGGAATTAGCTCAGATCATGGCTTAATGAGTATTGATTTCAAAGATGGAGTTCTCACAATTCCAAAGCTTGCAATTGCAGAGATGACTGAACCTTTGTTCAGGAACCTCATAGCCTTCGAGCAGTGCTATCACAATCGCGAACATATGATAGCTTCTTATGCACTTTTAATGGATAACCTCATTGCTACCAGCAAGGATGTTGTTTTTCTTTGTGACAAAGGAATAATCAATAATTGGTTTAGTGCTGAAGATGCTTCCCAGTTGTTCAGTAAGCTTCATAGTGACACATTGATTGTTGCTTTTTGCTATGGCGGGCTCTGTGCTGCAGTGAACAAATATTACAGAGCTAGATGGAACAAGTGGCTAGCCCGATTGAAGCGTGATTACTTATCTAATCCATGGAAAATCACTTCTTTGGTTGCAGCCTTTATCCTTCTGGTTCTCACCCTATTGCAGACAACATATACCATTCAGCAGTACTACTCTCCTCCTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

448

Amino Acids

51.19

Weight (kDa)

5.52

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 34 - 431 6.3e-109 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 315, 987
AccIII TCCGGA 1 cut(s) 123
AciI CCGC 1 cut(s) 1161
AclWI GGATC 2 cut(s) 271, 500
AcsI RAATTY 4 cut(s) 433, 720, 773, 842
AcuI CTGAAG 2 cut(s) 135, 1116
AfaI GTAC 2 cut(s) 19, 1328
AfiI CCNNNNNNNGG 2 cut(s) 437, 636
AgsI TTSAA 6 cut(s) 35, 769, 779, 842, 889, 1225
AjnI CCWGG 1 cut(s) 474
AluBI AGCT 8 cut(s) 64, 93, 272, 858, 916, 1001, 1123, 1196
AluI AGCT 8 cut(s) 64, 93, 272, 858, 916, 1001, 1123, 1196
Alw21I GWGCWC 2 cut(s) 123, 648
Alw26I GTCTC 4 cut(s) 121, 166, 600, 791
AlwI GGATC 2 cut(s) 271, 500
Ama87I CYCGRG 1 cut(s) 590
Aor13HI TCCGGA 1 cut(s) 123
ApeKI GCWGC 5 cut(s) 189, 390, 792, 1172, 1271
ApoI RAATTY 4 cut(s) 433, 720, 773, 842
ArsI GACNNNNNNTTYG 2 cut(s) 925, 957
Asp700I GAANNNNTTC 1 cut(s) 362
AspLEI GCGC 1 cut(s) 317
AspS9I GGNCC 3 cut(s) 170, 478, 532
AsuHPI GGTGA 2 cut(s) 452, 1285
AsuNHI GCTAGC 2 cut(s) 89, 1213
AvaI CYCGRG 1 cut(s) 590
AvaII GGWCC 3 cut(s) 170, 478, 532
BanII GRGCYC 1 cut(s) 1167
BarI GAAGNNNNNNTAC 2 cut(s) 1217, 1249
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 2 cut(s) 123, 648
BbvI GCAGC 5 cut(s) 201, 377, 804, 1159, 1283
BccI CCATC 4 cut(s) 46, 380, 887, 1194
BciT130I CCWGG 1 cut(s) 476
BclI TGATCA 2 cut(s) 343, 741
BcoDI GTCTC 4 cut(s) 121, 166, 600, 791
BfaI CTAG 4 cut(s) 90, 636, 1197, 1214
BfmI CTRYAG 2 cut(s) 421, 1173
BisI GCNGC 5 cut(s) 190, 391, 793, 1173, 1272
BlsI GCNGC 5 cut(s) 191, 392, 794, 1174, 1273
BmcAI AGTACT 1 cut(s) 1328
Bme1390I CCNGG 1 cut(s) 476
Bme18I GGWCC 3 cut(s) 170, 478, 532
BmeT110I CYCGRG 1 cut(s) 590
BmgT120I GGNCC 3 cut(s) 170, 478, 532
BmiI GGNNCC 3 cut(s) 172, 678, 953
BmrFI CCNGG 1 cut(s) 476
BmrI ACTGGG 2 cut(s) 309, 1102
BmsI GCATC 1 cut(s) 1090
BmtI GCTAGC 2 cut(s) 93, 1217
BmuI ACTGGG 2 cut(s) 309, 1102
BpiI GAAGAC 1 cut(s) 12
BsaBI GATNNNNATC 1 cut(s) 504
BsaJI CCNNGG 6 cut(s) 10, 207, 280, 474, 578, 1247
BsaWI WCCGGW 1 cut(s) 123
Bsc4I CCNNNNNNNGG 2 cut(s) 437, 636
Bse1I ACTGG 5 cut(s) 304, 481, 535, 678, 1108
Bse3DI GCAATG 1 cut(s) 1029
Bse8I GATNNNNATC 1 cut(s) 504
BseAI TCCGGA 1 cut(s) 123
BseBI CCWGG 1 cut(s) 476
BseDI CCNNGG 6 cut(s) 10, 207, 280, 474, 578, 1247
BseGI GGATG 1 cut(s) 1051
BseJI GATNNNNATC 1 cut(s) 504
BseLI CCNNNNNNNGG 2 cut(s) 437, 636
BseMI GCAATG 1 cut(s) 1029
BseMII CTCAG 1 cut(s) 873
BseNI ACTGG 5 cut(s) 304, 481, 535, 678, 1108
BseRI GAGGAG 1 cut(s) 1326
BseXI GCAGC 5 cut(s) 201, 377, 804, 1159, 1283
Bsh1236I CGCG 2 cut(s) 315, 987
BsiHKAI GWGCWC 2 cut(s) 123, 648
BsiHKCI CYCGRG 1 cut(s) 590
BsiSI CCGG 1 cut(s) 124
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 2 cut(s) 437, 636
BsmAI GTCTC 4 cut(s) 121, 166, 600, 791
BsmFI GGGAC 1 cut(s) 611
BsoBI CYCGRG 1 cut(s) 590
Bsp1286I GDGCHC 3 cut(s) 123, 648, 1167
Bsp13I TCCGGA 1 cut(s) 123
Bsp143I GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
Bsp19I CCATGG 3 cut(s) 10, 207, 1247
Bsp68I TCGCGA 1 cut(s) 987
BspACI CCGC 1 cut(s) 1161
BspCNI CTCAG 1 cut(s) 872
BspEI TCCGGA 1 cut(s) 123
BspFNI CGCG 2 cut(s) 315, 987
BspHI TCATGA 1 cut(s) 709
BspLI GGNNCC 3 cut(s) 172, 678, 953
BspMAI CTGCAG 1 cut(s) 1177
BspOI GCTAGC 2 cut(s) 93, 1217
BspPI GGATC 2 cut(s) 271, 500
BsrDI GCAATG 1 cut(s) 1029
BsrI ACTGG 5 cut(s) 304, 481, 535, 678, 1108
BssECI CCNNGG 6 cut(s) 10, 207, 280, 474, 578, 1247
BssMI GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
BssT1I CCWWGG 5 cut(s) 10, 207, 280, 578, 1247
Bst2UI CCWGG 1 cut(s) 476
Bst4CI ACNGT 3 cut(s) 185, 225, 692
BstC8I GCNNGC 5 cut(s) 91, 835, 918, 1163, 1215
BstDEI CTNAG 2 cut(s) 859, 1341
BstDSI CCRYGG 3 cut(s) 10, 207, 1247
BstF5I GGATG 1 cut(s) 1051
BstFNI CGCG 2 cut(s) 315, 987
BstHHI GCGC 1 cut(s) 317
BstKTI GATC 8 cut(s) 279, 346, 454, 508, 553, 739, 744, 865
BstMAI GTCTC 4 cut(s) 121, 166, 600, 791
BstMBI GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
BstMWI GCNNNNNNNGC 2 cut(s) 1007, 1100
BstNI CCWGG 1 cut(s) 476
BstSCI CCNGG 1 cut(s) 474
BstSFI CTRYAG 2 cut(s) 421, 1173
BstUI CGCG 2 cut(s) 315, 987
BstV1I GCAGC 5 cut(s) 201, 377, 804, 1159, 1283
BstV2I GAAGAC 1 cut(s) 12
BtgI CCRYGG 3 cut(s) 10, 207, 1247
BtsCI GGATG 1 cut(s) 1051
BtsI GCAGTG 2 cut(s) 977, 1182
BtsIMutI CAGTG 3 cut(s) 671, 977, 1182
BtuMI TCGCGA 1 cut(s) 987
Cac8I GCNNGC 5 cut(s) 91, 835, 918, 1163, 1215
CciI TCATGA 1 cut(s) 709
CfoI GCGC 1 cut(s) 317
Cfr13I GGNCC 3 cut(s) 170, 478, 532
Csp6I GTAC 2 cut(s) 18, 1327
CviQI GTAC 2 cut(s) 18, 1327
DdeI CTNAG 2 cut(s) 859, 1341
DpnI GATC 8 cut(s) 278, 345, 453, 507, 552, 738, 743, 864
DpnII GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
DraI TTTAAA 3 cut(s) 234, 267, 700
Eco130I CCWWGG 5 cut(s) 10, 207, 280, 578, 1247
Eco24I GRGCYC 1 cut(s) 1167
Eco47I GGWCC 3 cut(s) 170, 478, 532
Eco57I CTGAAG 2 cut(s) 135, 1116
Eco88I CYCGRG 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 842
EcoRII CCWGG 1 cut(s) 474
EcoT14I CCWWGG 5 cut(s) 10, 207, 280, 578, 1247
EcoT38I GRGCYC 1 cut(s) 1167
ErhI CCWWGG 5 cut(s) 10, 207, 280, 578, 1247
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FaqI GGGAC 1 cut(s) 611
FauI CCCGC 1 cut(s) 1154
FauNDI CATATG 2 cut(s) 145, 993
FbaI TGATCA 2 cut(s) 343, 741
Fnu4HI GCNGC 5 cut(s) 190, 391, 793, 1173, 1272
FokI GGATG 1 cut(s) 1058
FriOI GRGCYC 1 cut(s) 1167
Fsp4HI GCNGC 5 cut(s) 190, 391, 793, 1173, 1272
FspBI CTAG 4 cut(s) 90, 636, 1197, 1214
GlaI GCGC 1 cut(s) 316
GluI GCNGC 5 cut(s) 190, 391, 793, 1173, 1272
HapII CCGG 1 cut(s) 124
HhaI GCGC 1 cut(s) 317
Hin6I GCGC 1 cut(s) 315
HinP1I GCGC 1 cut(s) 315
HincII GTYRAC 1 cut(s) 417
HindII GTYRAC 1 cut(s) 417
HindIII AAGCTT 4 cut(s) 62, 270, 914, 1121
HinfI GANTC 5 cut(s) 335, 470, 488, 593, 779
HpaII CCGG 1 cut(s) 124
HphI GGTGA 2 cut(s) 452, 1285
Hpy166II GTNNAC 2 cut(s) 417, 1180
Hpy188I TCNGA 8 cut(s) 107, 170, 493, 741, 746, 784, 848, 862
Hpy188III TCNNGA 8 cut(s) 113, 124, 247, 590, 686, 710, 949, 986
Hpy8I GTNNAC 2 cut(s) 417, 1180
HpyAV CCTTC 4 cut(s) 50, 206, 973, 1292
HpyCH4III ACNGT 3 cut(s) 185, 225, 692
HpyF10VI GCNNNNNNNGC 2 cut(s) 1007, 1100
HpyF3I CTNAG 2 cut(s) 859, 1341
HspAI GCGC 1 cut(s) 315
Kpn2I TCCGGA 1 cut(s) 123
Ksp22I TGATCA 2 cut(s) 343, 741
Kzo9I GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
LmnI GCTCC 1 cut(s) 126
Lsp1109I GCAGC 5 cut(s) 201, 377, 804, 1159, 1283
LweI GCATC 1 cut(s) 1090
MaeI CTAG 4 cut(s) 90, 636, 1197, 1214
MaeIII GTNAC 3 cut(s) 686, 1061, 1130
MalI GATC 8 cut(s) 278, 345, 453, 507, 552, 738, 743, 864
MboI GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
MboII GAAGA 4 cut(s) 17, 545, 716, 1109
MfeI CAATTG 1 cut(s) 921
MhlI GDGCHC 3 cut(s) 123, 648, 1167
MluCI AATT 8 cut(s) 433, 720, 773, 842, 852, 906, 921, 1081
MlyI GAGTC 1 cut(s) 602
MmeI TCCRAC 1 cut(s) 486
MnlI CCTC 8 cut(s) 133, 436, 641, 823, 842, 965, 1037, 1347
MroI TCCGGA 1 cut(s) 123
MroXI GAANNNNTTC 1 cut(s) 362
MseI TTAA 7 cut(s) 233, 266, 351, 447, 699, 872, 1016
MslI CAYNNNNRTG 2 cut(s) 371, 708
MspI CCGG 1 cut(s) 124
MspR9I CCNGG 1 cut(s) 476
MunI CAATTG 1 cut(s) 921
MvaI CCWGG 1 cut(s) 476
MvnI CGCG 2 cut(s) 315, 987
MwoI GCNNNNNNNGC 2 cut(s) 1007, 1100
NcoI CCATGG 3 cut(s) 10, 207, 1247
NdeI CATATG 2 cut(s) 145, 993
NdeII GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
NheI GCTAGC 2 cut(s) 89, 1213
NlaIV GGNNCC 3 cut(s) 172, 678, 953
NmuCI GTSAC 3 cut(s) 686, 1061, 1130
NruI TCGCGA 1 cut(s) 987
PaeR7I CTCGAG 1 cut(s) 590
PagI TCATGA 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 4 cut(s) 335, 470, 488, 779
PkrI GCNGC 5 cut(s) 191, 392, 794, 1174, 1273
PleI GAGTC 1 cut(s) 601
PpsI GAGTC 1 cut(s) 601
Psp6I CCWGG 1 cut(s) 474
PspGI CCWGG 1 cut(s) 474
PspN4I GGNNCC 3 cut(s) 172, 678, 953
PspPI GGNCC 3 cut(s) 170, 478, 532
PsrI GAACNNNNNNTAC 2 cut(s) 1172, 1204
PstI CTGCAG 1 cut(s) 1177
RruI TCGCGA 1 cut(s) 987
RsaI GTAC 2 cut(s) 19, 1328
RsaNI GTAC 2 cut(s) 18, 1327
RseI CAYNNNNRTG 2 cut(s) 371, 708
SaqAI TTAA 7 cut(s) 233, 266, 351, 447, 699, 872, 1016
SatI GCNGC 5 cut(s) 190, 391, 793, 1173, 1272
Sau3AI GATC 8 cut(s) 276, 343, 451, 505, 550, 736, 741, 862
Sau96I GGNCC 3 cut(s) 170, 478, 532
ScaI AGTACT 1 cut(s) 1328
SchI GAGTC 1 cut(s) 602
ScrFI CCNGG 1 cut(s) 476
SduI GDGCHC 3 cut(s) 123, 648, 1167
SfaNI GCATC 1 cut(s) 1090
SfcI CTRYAG 2 cut(s) 421, 1173
Sfr274I CTCGAG 1 cut(s) 590
SinI GGWCC 3 cut(s) 170, 478, 532
SlaI CTCGAG 1 cut(s) 590
SmiMI CAYNNNNRTG 2 cut(s) 371, 708
SmlI CTYRAG 1 cut(s) 590
SmoI CTYRAG 1 cut(s) 590
Sse9I AATT 8 cut(s) 433, 720, 773, 842, 852, 906, 921, 1081
SsiI CCGC 1 cut(s) 1161
SspI AATATT 3 cut(s) 25, 295, 1187
SspMI CTAG 4 cut(s) 90, 636, 1197, 1214
StyD4I CCNGG 1 cut(s) 474
StyI CCWWGG 5 cut(s) 10, 207, 280, 578, 1247
TaaI ACNGT 3 cut(s) 185, 225, 692
TaqI TCGA 3 cut(s) 591, 648, 966
TasI AATT 8 cut(s) 433, 720, 773, 842, 852, 906, 921, 1081
TatI WGTACW 2 cut(s) 17, 1326
TfiI GAWTC 4 cut(s) 335, 470, 488, 779
Tru1I TTAA 7 cut(s) 233, 266, 351, 447, 699, 872, 1016
Tru9I TTAA 7 cut(s) 233, 266, 351, 447, 699, 872, 1016
TscAI CASTG 3 cut(s) 678, 977, 1182
TseFI GTSAC 3 cut(s) 686, 1061, 1130
TseI GCWGC 5 cut(s) 189, 390, 792, 1172, 1271
Tsp45I GTSAC 3 cut(s) 686, 1061, 1130
TspDTI ATGAA 4 cut(s) 167, 355, 698, 1115
TspRI CASTG 3 cut(s) 678, 977, 1182
VpaK11BI GGWCC 3 cut(s) 170, 478, 532
XapI RAATTY 4 cut(s) 433, 720, 773, 842
XhoI CTCGAG 1 cut(s) 590
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 4 cut(s) 90, 636, 1197, 1214
ZrmI AGTACT 1 cut(s) 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.