Rw5G042130

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000188
Physical Location & Seq
Reverse (-)
73862580 .. 73863896
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G042130.1

Sequence Viewer

Length: 1317 bp
ATGGAAATTTGGAGTGAATCGAGTGATATAGAAAATGGTCAAGTGGATGAAGATGAACAATGGAAAAGAACCTTCGATATAAAGCTTTTGAATGCCAAATCACCTTTGCCTTCTACATGTTGCATCTTCAAAGTTCCCGAGGTGCTACGACGACAAAACAAACAAGCATACGAACCTGATATAGTCTCAATCGGACCCTTTCACCGAGGTGCTGGTGAAAAAATTAAACTTGTGGGAAATGTGAAAGAATGGTATTTAAAGTGCCTTCTCTCGCGTACGAAGACAATAACCTTGGATAGCTTGATTGAAAGCATCAAGGGACTGGGACTGGAAAAACAAGCCCGAGGTTGTTATGAACCATGCTTTCATCTTGACCAAAACCACTTCATAGAGATGCTCATACTCGATGGTTGTTTCTTGATAGAATTATTTCAGAAGGCACATTCTAAAGACAAACAAGATAGTGACGACCCTATTTTTCATGTGTCTTGTATGCTGGAATACCTATACCATGATCTTCTGTTGCTAGAAAATCAGCTACCTTGGTTTGTGCTCGAGTTTTTCTATAACCTAACTGAGCCAGGTAGCCCTAAATCCCTTAGTAATGTGGTAATAGACTTCTTCAGAGATGCAATGGCTGATCCTCGAATTTTCAGTGATCCCAATCCCAAGTCTCCTGGTAAGATCCTTCACATACTTGATCTGATTAGAACTGCCCTCGTTGAAAAACATTTCCAAAGTTCGCCAGAAGCCTCCAAATCAAACCACTTGCCGCAGAGGATACCTTGTGCTACTGCTCTTTCAGAGGCAGGAGTTAAATTTGAAAAGGGCTCCCCAGGTTGCATATTGGCCATTGCGTTCAAAGATGGTGTTTTCACCATTCCTCCTCTGGCTATCGATGAGAGGACGGGTCCTTTGTTCAGGAACCTAATGGCCTTCGAGCAGTGTTATCACAGTCACGAGCACAAGATAACATCCTACGCGGTTTTGATGGATAACCTCATAGATACGAACAAGGATGTGGATCTTTTATGTGAGAAAAATATAGTAGCCAACTGGTTGAGTGCCGATGATGCTTCAAAGTTCTTCAACGATCTATACAATGACACCACAGTCATTGACTTTGTCTACCGGGGACTCTGCGAAGAAGTCAATAATTATCACAAAGCTCCTTGGAACAGGTGGAGCGAGACGCTGAAACGTGATTATTTTGGTACACCATGGGCTGCTATCTCTTTTTGTGCAGCTTTTGTCCTCCTGGTCCTCACCTTCTTGCAAACCATATACACAATCCACCCGTACTATCATCCTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

438

Amino Acids

50.27

Weight (kDa)

5.53

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 42 - 422 2.5e-115 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1112
AccI GTMKAC 1 cut(s) 1128
AccII CGCG 2 cut(s) 274, 983
AciI CCGC 2 cut(s) 773, 983
AclWI GGATC 4 cut(s) 635, 653, 679, 1032
AcoI YGGCCR 1 cut(s) 849
AcsI RAATTY 3 cut(s) 6, 648, 818
AcuI CTGAAG 1 cut(s) 607
AfaI GTAC 3 cut(s) 277, 1216, 1301
AflIII ACRYGT 1 cut(s) 116
AgsI TTSAA 8 cut(s) 91, 130, 308, 725, 824, 862, 1080, 1090
AjnI CCWGG 4 cut(s) 580, 676, 835, 1257
AleI CACNNNNGTG 1 cut(s) 207
AluBI AGCT 5 cut(s) 85, 300, 538, 1169, 1247
AluI AGCT 5 cut(s) 85, 300, 538, 1169, 1247
Alw21I GWGCWC 2 cut(s) 555, 966
Alw26I GTCTC 3 cut(s) 190, 678, 1184
AlwI GGATC 4 cut(s) 635, 653, 679, 1032
Ama87I CYCGRG 3 cut(s) 137, 342, 554
AoxI GGCC 2 cut(s) 849, 933
ApeKI GCWGC 2 cut(s) 1226, 1244
ApoI RAATTY 3 cut(s) 6, 648, 818
ArsI GACNNNNNNTTYG 2 cut(s) 898, 930
Asp700I GAANNNNTTC 1 cut(s) 429
AspS9I GGNCC 3 cut(s) 194, 911, 1261
AsuC2I CCSGG 1 cut(s) 1133
AsuHPI GGTGA 5 cut(s) 93, 194, 227, 868, 1258
AvaI CYCGRG 3 cut(s) 137, 342, 554
AvaII GGWCC 3 cut(s) 194, 911, 1261
BalI TGGCCA 1 cut(s) 851
BanII GRGCYC 1 cut(s) 833
BauI CACGAG 1 cut(s) 959
BbsI GAAGAC 1 cut(s) 287
Bbv12I GWGCWC 2 cut(s) 555, 966
BbvI GCAGC 2 cut(s) 1213, 1256
BccI CCATC 3 cut(s) 401, 860, 985
BciT130I CCWGG 4 cut(s) 582, 678, 837, 1259
BciVI GTATCC 1 cut(s) 774
BcnI CCSGG 1 cut(s) 1133
BcoDI GTCTC 3 cut(s) 190, 678, 1184
BfaI CTAG 1 cut(s) 527
BfuI GTATCC 1 cut(s) 774
BisI GCNGC 3 cut(s) 773, 1227, 1245
BlsI GCNGC 3 cut(s) 774, 1228, 1246
Bme1390I CCNGG 5 cut(s) 582, 678, 837, 1133, 1259
Bme18I GGWCC 3 cut(s) 194, 911, 1261
BmeT110I CYCGRG 3 cut(s) 137, 342, 554
BmgT120I GGNCC 3 cut(s) 194, 911, 1261
BmiI GGNNCC 4 cut(s) 196, 832, 912, 926
BmrFI CCNGG 5 cut(s) 582, 678, 837, 1133, 1259
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 5 cut(s) 132, 321, 384, 619, 1063
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 1 cut(s) 287
BpuMI CCSGG 1 cut(s) 1133
Bsa29I ATCGAT 1 cut(s) 897
BsaBI GATNNNNATC 2 cut(s) 663, 1023
BsaJI CCNNGG 9 cut(s) 138, 205, 291, 343, 542, 835, 1132, 1172, 1220
BsaXI ACNNNNNCTCC 2 cut(s) 868, 898
Bse1I ACTGG 3 cut(s) 327, 333, 1061
Bse3DI GCAATG 2 cut(s) 639, 852
Bse8I GATNNNNATC 2 cut(s) 663, 1023
BseBI CCWGG 4 cut(s) 582, 678, 837, 1259
BseCI ATCGAT 1 cut(s) 897
BseDI CCNNGG 9 cut(s) 138, 205, 291, 343, 542, 835, 1132, 1172, 1220
BseGI GGATG 4 cut(s) 52, 974, 1024, 1306
BseJI GATNNNNATC 2 cut(s) 663, 1023
BseMI GCAATG 2 cut(s) 639, 852
BseMII CTCAG 1 cut(s) 567
BseNI ACTGG 3 cut(s) 327, 333, 1061
BseRI GAGGAG 1 cut(s) 876
BseXI GCAGC 2 cut(s) 1213, 1256
BsgI GTGCAG 1 cut(s) 1263
Bsh1236I CGCG 2 cut(s) 274, 983
BshFI GGCC 2 cut(s) 851, 935
BshVI ATCGAT 1 cut(s) 897
BsiHKAI GWGCWC 2 cut(s) 555, 966
BsiHKCI CYCGRG 3 cut(s) 137, 342, 554
BsiSI CCGG 1 cut(s) 1132
BsiWI CGTACG 1 cut(s) 275
BslFI GGGAC 3 cut(s) 333, 339, 1149
BsmAI GTCTC 3 cut(s) 190, 678, 1184
BsmBI CGTCTC 1 cut(s) 1184
BsmFI GGGAC 3 cut(s) 333, 339, 1149
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 2 cut(s) 851, 935
BsoBI CYCGRG 3 cut(s) 137, 342, 554
Bsp1286I GDGCHC 3 cut(s) 555, 833, 966
Bsp143I GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
Bsp19I CCATGG 1 cut(s) 1220
BspACI CCGC 2 cut(s) 773, 983
BspANI GGCC 2 cut(s) 851, 935
BspCNI CTCAG 1 cut(s) 568
BspDI ATCGAT 1 cut(s) 897
BspFNI CGCG 2 cut(s) 274, 983
BspLI GGNNCC 4 cut(s) 196, 832, 912, 926
BspPI GGATC 4 cut(s) 635, 653, 679, 1032
BsrDI GCAATG 2 cut(s) 639, 852
BsrI ACTGG 3 cut(s) 327, 333, 1061
BssECI CCNNGG 9 cut(s) 138, 205, 291, 343, 542, 835, 1132, 1172, 1220
BssMI GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
BssSI CACGAG 1 cut(s) 959
BssT1I CCWWGG 4 cut(s) 291, 542, 1172, 1220
Bst2BI CACGAG 1 cut(s) 959
Bst2UI CCWGG 4 cut(s) 582, 678, 837, 1259
Bst4CI ACNGT 2 cut(s) 956, 1114
BstDEI CTNAG 2 cut(s) 576, 599
BstDSI CCRYGG 1 cut(s) 1220
BstF5I GGATG 4 cut(s) 52, 974, 1024, 1306
BstFNI CGCG 2 cut(s) 274, 983
BstKTI GATC 7 cut(s) 517, 643, 661, 687, 703, 1027, 1096
BstMAI GTCTC 3 cut(s) 190, 678, 1184
BstMBI GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
BstMWI GCNNNNNNNGC 1 cut(s) 1073
BstNI CCWGG 4 cut(s) 582, 678, 837, 1259
BstNSI RCATGY 1 cut(s) 120
BstSCI CCNGG 5 cut(s) 580, 676, 835, 1131, 1257
BstUI CGCG 2 cut(s) 274, 983
BstV1I GCAGC 2 cut(s) 1213, 1256
BstV2I GAAGAC 1 cut(s) 287
BstX2I RGATCY 2 cut(s) 684, 1024
BstYI RGATCY 2 cut(s) 684, 1024
Bsu15I ATCGAT 1 cut(s) 897
BsuI GTATCC 1 cut(s) 774
BsuRI GGCC 2 cut(s) 851, 935
BsuTUI ATCGAT 1 cut(s) 897
BtgI CCRYGG 1 cut(s) 1220
BtsCI GGATG 4 cut(s) 52, 974, 1024, 1306
BtsI GCAGTG 1 cut(s) 950
BtsIMutI CAGTG 2 cut(s) 661, 950
Cfr13I GGNCC 3 cut(s) 194, 911, 1261
ClaI ATCGAT 1 cut(s) 897
CseI GACGC 1 cut(s) 1201
Csp6I GTAC 3 cut(s) 276, 1215, 1300
CspCI CAANNNNNGTGG 2 cut(s) 1099, 1134
CviAII CATG 5 cut(s) 117, 360, 482, 512, 1221
CviQI GTAC 3 cut(s) 276, 1215, 1300
DdeI CTNAG 2 cut(s) 576, 599
DpnI GATC 7 cut(s) 516, 642, 660, 686, 702, 1026, 1095
DpnII GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
DraI TTTAAA 1 cut(s) 258
DrdI GACNNNNNNGTC 1 cut(s) 1112
DseDI GACNNNNNNGTC 1 cut(s) 1112
EaeI YGGCCR 1 cut(s) 849
Eco130I CCWWGG 4 cut(s) 291, 542, 1172, 1220
Eco24I GRGCYC 1 cut(s) 833
Eco47I GGWCC 3 cut(s) 194, 911, 1261
Eco57I CTGAAG 1 cut(s) 607
Eco88I CYCGRG 3 cut(s) 137, 342, 554
EcoO109I RGGNCCY 1 cut(s) 911
EcoRII CCWGG 4 cut(s) 580, 676, 835, 1257
EcoT14I CCWWGG 4 cut(s) 291, 542, 1172, 1220
EcoT38I GRGCYC 1 cut(s) 833
ErhI CCWWGG 4 cut(s) 291, 542, 1172, 1220
Esp3I CGTCTC 1 cut(s) 1184
FaeI CATG 5 cut(s) 120, 363, 485, 515, 1224
FaqI GGGAC 3 cut(s) 333, 339, 1149
FatI CATG 5 cut(s) 116, 359, 481, 511, 1220
FblI GTMKAC 1 cut(s) 1128
Fnu4HI GCNGC 3 cut(s) 773, 1227, 1245
FokI GGATG 4 cut(s) 59, 961, 1031, 1293
FriOI GRGCYC 1 cut(s) 833
Fsp4HI GCNGC 3 cut(s) 773, 1227, 1245
FspBI CTAG 1 cut(s) 527
GluI GCNGC 3 cut(s) 773, 1227, 1245
HaeIII GGCC 2 cut(s) 851, 935
HapII CCGG 1 cut(s) 1132
HgaI GACGC 1 cut(s) 1201
Hin1II CATG 5 cut(s) 120, 363, 485, 515, 1224
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 2 cut(s) 17, 1137
HpaII CCGG 1 cut(s) 1132
HphI GGTGA 5 cut(s) 93, 194, 227, 868, 1258
Hpy166II GTNNAC 2 cut(s) 1129, 1217
Hpy188I TCNGA 5 cut(s) 194, 435, 626, 705, 805
Hpy188III TCNNGA 5 cut(s) 137, 371, 418, 922, 959
Hpy8I GTNNAC 2 cut(s) 1129, 1217
Hpy99I CGWCG 1 cut(s) 153
HpyAV CCTTC 7 cut(s) 82, 120, 275, 430, 698, 946, 1279
HpyCH4III ACNGT 2 cut(s) 956, 1114
HpyCH4IV ACGT 1 cut(s) 1201
HpyCH4V TGCA 5 cut(s) 123, 632, 843, 1244, 1276
HpyF10VI GCNNNNNNNGC 1 cut(s) 1073
HpyF3I CTNAG 2 cut(s) 576, 599
HpySE526I ACGT 1 cut(s) 1201
Hsp92II CATG 5 cut(s) 120, 363, 485, 515, 1224
Kzo9I GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
LmnI GCTCC 3 cut(s) 836, 1174, 1185
Lsp1109I GCAGC 2 cut(s) 1213, 1256
LweI GCATC 5 cut(s) 132, 321, 384, 619, 1063
MaeI CTAG 1 cut(s) 527
MaeII ACGT 1 cut(s) 1201
MaeIII GTNAC 2 cut(s) 464, 956
MalI GATC 7 cut(s) 516, 642, 660, 686, 702, 1026, 1095
MboI GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
MboII GAAGA 7 cut(s) 62, 118, 292, 509, 613, 1078, 1157
MflI RGATCY 2 cut(s) 684, 1024
MhlI GDGCHC 3 cut(s) 555, 833, 966
MlsI TGGCCA 1 cut(s) 851
MluCI AATT 6 cut(s) 6, 222, 425, 648, 818, 1156
MluNI TGGCCA 1 cut(s) 851
MlyI GAGTC 1 cut(s) 1131
Mox20I TGGCCA 1 cut(s) 851
MroXI GAANNNNTTC 1 cut(s) 429
MscI TGGCCA 1 cut(s) 851
MseI TTAA 3 cut(s) 225, 257, 816
MslI CAYNNNNRTG 2 cut(s) 207, 392
Msp20I TGGCCA 1 cut(s) 851
MspI CCGG 1 cut(s) 1132
MspR9I CCNGG 5 cut(s) 582, 678, 837, 1133, 1259
Mva1269I GAATGC 1 cut(s) 97
MvaI CCWGG 4 cut(s) 582, 678, 837, 1259
MvnI CGCG 2 cut(s) 274, 983
MwoI GCNNNNNNNGC 1 cut(s) 1073
NciI CCSGG 1 cut(s) 1133
NcoI CCATGG 1 cut(s) 1220
NdeII GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
NlaIII CATG 5 cut(s) 120, 363, 485, 515, 1224
NlaIV GGNNCC 4 cut(s) 196, 832, 912, 926
NmuCI GTSAC 2 cut(s) 464, 956
NspI RCATGY 1 cut(s) 120
OliI CACNNNNGTG 1 cut(s) 207
PaeR7I CTCGAG 1 cut(s) 554
PciI ACATGT 1 cut(s) 116
PctI GAATGC 1 cut(s) 97
PdmI GAANNNNTTC 1 cut(s) 429
PfeI GAWTC 1 cut(s) 17
Pfl23II CGTACG 1 cut(s) 275
PflFI GACNNNGTC 1 cut(s) 1124
PkrI GCNGC 3 cut(s) 774, 1228, 1246
PleI GAGTC 1 cut(s) 1131
PpsI GAGTC 1 cut(s) 1131
PpuMI RGGWCCY 1 cut(s) 911
PscI ACATGT 1 cut(s) 116
Psp5II RGGWCCY 1 cut(s) 911
Psp6I CCWGG 4 cut(s) 580, 676, 835, 1257
PspGI CCWGG 4 cut(s) 580, 676, 835, 1257
PspLI CGTACG 1 cut(s) 275
PspN4I GGNNCC 4 cut(s) 196, 832, 912, 926
PspPI GGNCC 3 cut(s) 194, 911, 1261
PspPPI RGGWCCY 1 cut(s) 911
PspXI VCTCGAGB 1 cut(s) 554
PsuI RGATCY 2 cut(s) 684, 1024
PsyI GACNNNGTC 1 cut(s) 1124
RsaI GTAC 3 cut(s) 277, 1216, 1301
RsaNI GTAC 3 cut(s) 276, 1215, 1300
RseI CAYNNNNRTG 2 cut(s) 207, 392
SaqAI TTAA 3 cut(s) 225, 257, 816
SatI GCNGC 3 cut(s) 773, 1227, 1245
Sau3AI GATC 7 cut(s) 514, 640, 658, 684, 700, 1024, 1093
Sau96I GGNCC 3 cut(s) 194, 911, 1261
SchI GAGTC 1 cut(s) 1131
ScrFI CCNGG 5 cut(s) 582, 678, 837, 1133, 1259
SduI GDGCHC 3 cut(s) 555, 833, 966
SfaNI GCATC 5 cut(s) 132, 321, 384, 619, 1063
Sfr274I CTCGAG 1 cut(s) 554
SinI GGWCC 3 cut(s) 194, 911, 1261
SlaI CTCGAG 1 cut(s) 554
SmiMI CAYNNNNRTG 2 cut(s) 207, 392
SmlI CTYRAG 1 cut(s) 554
SmoI CTYRAG 1 cut(s) 554
Sse9I AATT 6 cut(s) 6, 222, 425, 648, 818, 1156
SsiI CCGC 2 cut(s) 773, 983
SspMI CTAG 1 cut(s) 527
StyD4I CCNGG 5 cut(s) 580, 676, 835, 1131, 1257
StyI CCWWGG 4 cut(s) 291, 542, 1172, 1220
TaaI ACNGT 2 cut(s) 956, 1114
TaiI ACGT 1 cut(s) 1204
TaqI TCGA 7 cut(s) 20, 75, 405, 555, 646, 897, 939
TasI AATT 6 cut(s) 6, 222, 425, 648, 818, 1156
TauI GCSGC 1 cut(s) 775
TfiI GAWTC 1 cut(s) 17
Tru1I TTAA 3 cut(s) 225, 257, 816
Tru9I TTAA 3 cut(s) 225, 257, 816
TscAI CASTG 2 cut(s) 661, 950
TseFI GTSAC 2 cut(s) 464, 956
TseI GCWGC 2 cut(s) 1226, 1244
Tsp45I GTSAC 2 cut(s) 464, 956
TspDTI ATGAA 6 cut(s) 63, 69, 356, 369, 376, 470
TspRI CASTG 2 cut(s) 661, 950
Tth111I GACNNNGTC 1 cut(s) 1124
VpaK11BI GGWCC 3 cut(s) 194, 911, 1261
XapI RAATTY 3 cut(s) 6, 648, 818
XceI RCATGY 1 cut(s) 120
XcmI CCANNNNNNNNNTGG 1 cut(s) 886
XhoI CTCGAG 1 cut(s) 554
XmiI GTMKAC 1 cut(s) 1128
XmnI GAANNNNTTC 1 cut(s) 429
XspI CTAG 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.