Rw5G026440

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000188
Physical Location & Seq
Forward (+)
38226439 .. 38227836
1398 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G026440.1

Sequence Viewer

Length: 1398 bp
ATGAGCAACTTCGATCAGATGGGTAGCAGTGATATAGAAAAGGGTAAAGCGGATGAAAGCGTTTCGATTCATCAAGACCGGAGAGGTATGACTATTGAACAATGGAAATGCATCTTCAATTCTGAGCTTTTGGAGGCCAAATCACCTGTGCCTTTTTCATGTTGCATCTTCAAAGTTCCTGAGGTGCTACGAAGACAAAAAAAGGAGGCATACGAACCTGACATAGTCTCAATCGGCCCCTTTCACCGAGGTGTTGATAAATTTCAACTCATGGAAAATGTGAAAAAATGGTATTTGAGCTGTCTTTTCTTGCCCCAGCGCCAGCGCCAGCGCCAGACAGTATTGAACATGGATAGCTTGATTGAAAGCATCAAGGGACAGGAAAAAAGTGCCCGGGGTTATTATTCAGACCCATGCTATCATCTTGACCAAAACGACTTCATAGAGATGCTCATACTCGATGGTTGTTTCTTAATAGAATTATTTCGGAAGGCACCTTCTGAGCATGCAAAAGCTCGACAAGATGAAGACGACCCTATCTTCAACATGCCTTGTATGCTCGAATACCTGTACCATGATCTTTTGTTGCTAGAAAATCAACTACCTTGGTTTGTGCTTGAGTCTGTCTATAAACTAATTGAGGGTGGTAGCCCTATAAAACCCCTCAGTCAAGTAGTAATAGACTTCTTCAAAGATTCAGTGGCTGAAGCTGAAATTTTTAGCTATCCCGATCCCAAGTCTCCTACGCAACCTGAGATTCTTCACATACTTGATCTGATAAGAACTTCCCTCGTTCAGGAACATGCAGACCAAAAGGAGACCCCCGCATCAAAGTTGGTAAACCACTTGCCACAGAGGATACCTAGTGCTGCTGCTCTTTTAGAGGCGGGGGTTAAATTTAGAAAGGGCGACTCAGGTTGCATATTGAACATAACGTTCAAAGGTGGCATTTTCACCATTCCTCCTCTGGCTATCGATGAAAGGACAGGTCCTATGTTCAGGAACCTTATGGCCTACGAACAGTGTTATGGCAGTTGCAAGCACATGATAACATCCTACGCGGTTTTGATGGATAACCTCATCGATACGAACAAGGATGTGGATCTTCTATGTGAAAAACATATACTAGCCAACTGGTTGAGTGCCGATGATGCTTCGAAGTTCTTCAACGATCTATACAATGACACCACAGTCATTGACTATGTCTACAAGGGACTTTGCGATAAAGTGCATTCATATCGCAAAGTACCATGGCACAAGTGGAGAAAGAAATTGAAACGTGATTATTTTGAAACACCATGGTCTACTATCTCTTTTATTGCAGCTTTTGTCCTCCTGGTCCTTACCTTCTTGCAGACCATATACACACTCCAACAGTACTATCATCCCCGCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

465

Amino Acids

53.85

Weight (kDa)

5.94

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 56 - 448 3.4e-115 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1190
AccB1I GGYRCC 1 cut(s) 493
AccBSI CCGCTC 1 cut(s) 1392
AccI GTMKAC 2 cut(s) 1206, 1304
AccII CGCG 1 cut(s) 1061
AciI CCGC 5 cut(s) 50, 825, 887, 1061, 1390
AclI AACGTT 1 cut(s) 935
AclWI GGATC 2 cut(s) 725, 1110
AcsI RAATTY 3 cut(s) 260, 714, 896
AcuI CTGAAG 1 cut(s) 726
AfaI GTAC 3 cut(s) 572, 1248, 1379
AfiI CCNNNNNNNGG 1 cut(s) 796
AjnI CCWGG 1 cut(s) 1335
AleI CACNNNNGTG 1 cut(s) 249
AluBI AGCT 7 cut(s) 127, 300, 357, 515, 710, 723, 1325
AluI AGCT 7 cut(s) 127, 300, 357, 515, 710, 723, 1325
Alw26I GTCTC 3 cut(s) 232, 744, 812
AlwI GGATC 2 cut(s) 725, 1110
AlwNI CAGNNNCTG 1 cut(s) 704
Ama87I CYCGRG 1 cut(s) 393
AoxI GGCC 3 cut(s) 135, 235, 1011
ApeKI GCWGC 3 cut(s) 869, 872, 1322
ApoI RAATTY 3 cut(s) 260, 714, 896
Asp700I GAANNNNTTC 2 cut(s) 483, 1163
AspLEI GCGC 3 cut(s) 321, 327, 333
AspS9I GGNCC 3 cut(s) 236, 989, 1339
AsuC2I CCSGG 2 cut(s) 394, 395
AsuHPI GGTGA 3 cut(s) 135, 236, 946
AsuII TTCGAA 1 cut(s) 1157
AvaI CYCGRG 1 cut(s) 393
AvaII GGWCC 2 cut(s) 989, 1339
AxyI CCTNAGG 1 cut(s) 180
BaeGI GKGCMC 1 cut(s) 394
BanI GGYRCC 1 cut(s) 493
BbsI GAAGAC 2 cut(s) 199, 534
BbvI GCAGC 3 cut(s) 856, 859, 1334
BccI CCATC 3 cut(s) 13, 455, 1063
BcgI CGANNNNNNTGC 2 cut(s) 1220, 1254
BciT130I CCWGG 1 cut(s) 1337
BciVI GTATCC 1 cut(s) 852
BcnI CCSGG 2 cut(s) 394, 395
BcoDI GTCTC 3 cut(s) 232, 744, 812
BfaI CTAG 3 cut(s) 590, 864, 1127
BfoI RGCGCY 3 cut(s) 322, 328, 334
BfuI GTATCC 1 cut(s) 852
BisI GCNGC 3 cut(s) 870, 873, 1323
BlsI GCNGC 3 cut(s) 871, 874, 1324
BmcAI AGTACT 1 cut(s) 1379
Bme1390I CCNGG 3 cut(s) 394, 395, 1337
Bme18I GGWCC 2 cut(s) 989, 1339
BmeT110I CYCGRG 1 cut(s) 393
BmgT120I GGNCC 3 cut(s) 236, 989, 1339
BmiI GGNNCC 3 cut(s) 238, 495, 1004
BmrFI CCNGG 3 cut(s) 394, 395, 1337
BmsI GCATC 6 cut(s) 120, 174, 378, 438, 836, 1141
BpiI GAAGAC 2 cut(s) 199, 534
Bpu14I TTCGAA 1 cut(s) 1157
BpuEI CTTGAG 1 cut(s) 638
BpuMI CCSGG 2 cut(s) 394, 395
Bsa29I ATCGAT 2 cut(s) 975, 1083
BsaBI GATNNNNATC 1 cut(s) 1101
BsaI GGTCTC 1 cut(s) 812
BsaJI CCNNGG 6 cut(s) 247, 393, 394, 605, 1250, 1298
BsaWI WCCGGW 1 cut(s) 78
BsaXI ACNNNNNCTCC 2 cut(s) 946, 976
Bsc4I CCNNNNNNNGG 1 cut(s) 796
Bse1I ACTGG 1 cut(s) 1139
Bse21I CCTNAGG 1 cut(s) 180
Bse8I GATNNNNATC 1 cut(s) 1101
BseBI CCWGG 1 cut(s) 1337
BseCI ATCGAT 2 cut(s) 975, 1083
BseDI CCNNGG 6 cut(s) 247, 393, 394, 605, 1250, 1298
BseGI GGATG 4 cut(s) 58, 1052, 1102, 1384
BseJI GATNNNNATC 1 cut(s) 1101
BseLI CCNNNNNNNGG 1 cut(s) 796
BseMII CTCAG 6 cut(s) 114, 171, 492, 679, 744, 927
BseNI ACTGG 1 cut(s) 1139
BseRI GAGGAG 1 cut(s) 954
BseSI GKGCMC 1 cut(s) 394
BseXI GCAGC 3 cut(s) 856, 859, 1334
BseYI CCCAGC 1 cut(s) 315
Bsh1236I CGCG 1 cut(s) 1061
BshFI GGCC 3 cut(s) 137, 237, 1013
BshNI GGYRCC 1 cut(s) 493
BshVI ATCGAT 2 cut(s) 975, 1083
BsiHKCI CYCGRG 1 cut(s) 393
BsiSI CCGG 2 cut(s) 79, 394
BslFI GGGAC 2 cut(s) 390, 1227
BslI CCNNNNNNNGG 1 cut(s) 796
BsmAI GTCTC 3 cut(s) 232, 744, 812
BsmFI GGGAC 2 cut(s) 390, 1227
BsmI GAATGC 1 cut(s) 1231
BsnI GGCC 3 cut(s) 137, 237, 1013
Bso31I GGTCTC 1 cut(s) 812
BsoBI CYCGRG 1 cut(s) 393
Bsp119I TTCGAA 1 cut(s) 1157
Bsp1286I GDGCHC 1 cut(s) 394
Bsp143I GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
Bsp19I CCATGG 2 cut(s) 1250, 1298
BspACI CCGC 5 cut(s) 50, 825, 887, 1061, 1390
BspANI GGCC 3 cut(s) 137, 237, 1013
BspCNI CTCAG 6 cut(s) 115, 172, 493, 678, 745, 926
BspDI ATCGAT 2 cut(s) 975, 1083
BspFNI CGCG 1 cut(s) 1061
BspHI TCATGA 1 cut(s) 1394
BspLI GGNNCC 3 cut(s) 238, 495, 1004
BspPI GGATC 2 cut(s) 725, 1110
BspT104I TTCGAA 1 cut(s) 1157
BspT107I GGYRCC 1 cut(s) 493
BspTNI GGTCTC 1 cut(s) 812
BsrBI CCGCTC 1 cut(s) 1392
BsrI ACTGG 1 cut(s) 1139
BssECI CCNNGG 6 cut(s) 247, 393, 394, 605, 1250, 1298
BssMI GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
BssT1I CCWWGG 3 cut(s) 605, 1250, 1298
Bst2UI CCWGG 1 cut(s) 1337
Bst4CI ACNGT 4 cut(s) 340, 1023, 1192, 1377
BstBI TTCGAA 1 cut(s) 1157
BstC8I GCNNGC 4 cut(s) 323, 329, 507, 1040
BstDEI CTNAG 6 cut(s) 123, 180, 501, 665, 753, 913
BstDSI CCRYGG 2 cut(s) 1250, 1298
BstENI CCTNNNNNAGG 1 cut(s) 794
BstF5I GGATG 4 cut(s) 58, 1052, 1102, 1384
BstFNI CGCG 1 cut(s) 1061
BstH2I RGCGCY 3 cut(s) 322, 328, 334
BstHHI GCGC 3 cut(s) 321, 327, 333
BstKTI GATC 6 cut(s) 16, 580, 733, 775, 1105, 1174
BstMAI GTCTC 3 cut(s) 232, 744, 812
BstMBI GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
BstMWI GCNNNNNNNGC 2 cut(s) 556, 1151
BstNI CCWGG 1 cut(s) 1337
BstNSI RCATGY 3 cut(s) 509, 550, 806
BstSCI CCNGG 3 cut(s) 392, 393, 1335
BstSLI GKGCMC 1 cut(s) 394
BstUI CGCG 1 cut(s) 1061
BstV1I GCAGC 3 cut(s) 856, 859, 1334
BstV2I GAAGAC 2 cut(s) 199, 534
BstX2I RGATCY 1 cut(s) 1102
BstYI RGATCY 1 cut(s) 1102
Bsu15I ATCGAT 2 cut(s) 975, 1083
Bsu36I CCTNAGG 1 cut(s) 180
BsuI GTATCC 1 cut(s) 852
BsuRI GGCC 3 cut(s) 137, 237, 1013
BsuTUI ATCGAT 2 cut(s) 975, 1083
BtgI CCRYGG 2 cut(s) 1250, 1298
BtsCI GGATG 4 cut(s) 58, 1052, 1102, 1384
BtsI GCAGTG 1 cut(s) 34
BtsIMutI CAGTG 3 cut(s) 34, 705, 1028
Cac8I GCNNGC 4 cut(s) 323, 329, 507, 1040
CaiI CAGNNNCTG 1 cut(s) 704
CciI TCATGA 1 cut(s) 1394
CfoI GCGC 3 cut(s) 321, 327, 333
Cfr13I GGNCC 3 cut(s) 236, 989, 1339
Cfr9I CCCGGG 1 cut(s) 393
ClaI ATCGAT 2 cut(s) 975, 1083
Csp6I GTAC 3 cut(s) 571, 1247, 1378
CspCI CAANNNNNGTGG 2 cut(s) 1177, 1212
CviQI GTAC 3 cut(s) 571, 1247, 1378
DdeI CTNAG 6 cut(s) 123, 180, 501, 665, 753, 913
DpnI GATC 6 cut(s) 15, 579, 732, 774, 1104, 1173
DpnII GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
DrdI GACNNNNNNGTC 1 cut(s) 1190
DseDI GACNNNNNNGTC 1 cut(s) 1190
Eco130I CCWWGG 3 cut(s) 605, 1250, 1298
Eco31I GGTCTC 1 cut(s) 812
Eco47I GGWCC 2 cut(s) 989, 1339
Eco57I CTGAAG 1 cut(s) 726
Eco81I CCTNAGG 1 cut(s) 180
Eco88I CYCGRG 1 cut(s) 393
EcoNI CCTNNNNNAGG 1 cut(s) 794
EcoO109I RGGNCCY 1 cut(s) 989
EcoRII CCWGG 1 cut(s) 1335
EcoT14I CCWWGG 3 cut(s) 605, 1250, 1298
EcoT22I ATGCAT 1 cut(s) 113
ErhI CCWWGG 3 cut(s) 605, 1250, 1298
FaqI GGGAC 2 cut(s) 390, 1227
FauI CCCGC 2 cut(s) 832, 880
FblI GTMKAC 2 cut(s) 1206, 1304
Fnu4HI GCNGC 3 cut(s) 870, 873, 1323
FokI GGATG 4 cut(s) 65, 1039, 1109, 1371
Fsp4HI GCNGC 3 cut(s) 870, 873, 1323
FspBI CTAG 3 cut(s) 590, 864, 1127
GlaI GCGC 3 cut(s) 320, 326, 332
GluI GCNGC 3 cut(s) 870, 873, 1323
GsaI CCCAGC 1 cut(s) 319
HaeII RGCGCY 3 cut(s) 322, 328, 334
HaeIII GGCC 3 cut(s) 137, 237, 1013
HapII CCGG 2 cut(s) 79, 394
HhaI GCGC 3 cut(s) 321, 327, 333
Hin6I GCGC 3 cut(s) 319, 325, 331
HinP1I GCGC 3 cut(s) 319, 325, 331
HinfI GANTC 5 cut(s) 67, 620, 695, 757, 911
HpaII CCGG 2 cut(s) 79, 394
HphI GGTGA 3 cut(s) 135, 236, 946
Hpy166II GTNNAC 3 cut(s) 841, 1207, 1305
Hpy188I TCNGA 6 cut(s) 18, 124, 409, 489, 502, 777
Hpy188III TCNNGA 7 cut(s) 74, 179, 425, 728, 797, 1000, 1395
Hpy8I GTNNAC 3 cut(s) 841, 1207, 1305
HpyAV CCTTC 3 cut(s) 484, 507, 1357
HpyCH4III ACNGT 4 cut(s) 340, 1023, 1192, 1377
HpyCH4IV ACGT 2 cut(s) 935, 1279
HpyCH4V TGCA 9 cut(s) 111, 165, 509, 806, 921, 1038, 1231, 1322, 1354
HpyF10VI GCNNNNNNNGC 2 cut(s) 556, 1151
HpyF3I CTNAG 6 cut(s) 123, 180, 501, 665, 753, 913
HpySE526I ACGT 2 cut(s) 935, 1279
HspAI GCGC 3 cut(s) 319, 325, 331
Kzo9I GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
Lsp1109I GCAGC 3 cut(s) 856, 859, 1334
LweI GCATC 6 cut(s) 120, 174, 378, 438, 836, 1141
MaeI CTAG 3 cut(s) 590, 864, 1127
MaeII ACGT 2 cut(s) 935, 1279
MalI GATC 6 cut(s) 15, 579, 732, 774, 1104, 1173
MbiI CCGCTC 1 cut(s) 1392
MboI GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
MboII GAAGA 9 cut(s) 106, 160, 204, 532, 539, 679, 752, 1097, 1156
MflI RGATCY 1 cut(s) 1102
MhlI GDGCHC 1 cut(s) 394
MluCI AATT 7 cut(s) 118, 260, 479, 636, 714, 896, 1271
MlyI GAGTC 2 cut(s) 629, 905
MmeI TCCRAC 1 cut(s) 1396
Mph1103I ATGCAT 1 cut(s) 113
MroXI GAANNNNTTC 2 cut(s) 483, 1163
MseI TTAA 2 cut(s) 473, 894
MslI CAYNNNNRTG 2 cut(s) 249, 446
MspI CCGG 2 cut(s) 79, 394
MspR9I CCNGG 3 cut(s) 394, 395, 1337
Mva1269I GAATGC 1 cut(s) 1231
MvaI CCWGG 1 cut(s) 1337
MvnI CGCG 1 cut(s) 1061
MwoI GCNNNNNNNGC 2 cut(s) 556, 1151
NciI CCSGG 2 cut(s) 394, 395
NcoI CCATGG 2 cut(s) 1250, 1298
NdeII GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
NlaIV GGNNCC 3 cut(s) 238, 495, 1004
NsiI ATGCAT 1 cut(s) 113
NspI RCATGY 3 cut(s) 509, 550, 806
NspV TTCGAA 1 cut(s) 1157
OliI CACNNNNGTG 1 cut(s) 249
PaeI GCATGC 1 cut(s) 509
PagI TCATGA 1 cut(s) 1394
PctI GAATGC 1 cut(s) 1231
PdmI GAANNNNTTC 2 cut(s) 483, 1163
PfeI GAWTC 3 cut(s) 67, 695, 757
PflFI GACNNNGTC 2 cut(s) 224, 1202
PkrI GCNGC 3 cut(s) 871, 874, 1324
PleI GAGTC 2 cut(s) 628, 905
PpsI GAGTC 2 cut(s) 628, 905
PpuMI RGGWCCY 1 cut(s) 989
Psp1406I AACGTT 1 cut(s) 935
Psp5II RGGWCCY 1 cut(s) 989
Psp6I CCWGG 1 cut(s) 1335
PspFI CCCAGC 1 cut(s) 315
PspGI CCWGG 1 cut(s) 1335
PspN4I GGNNCC 3 cut(s) 238, 495, 1004
PspPI GGNCC 3 cut(s) 236, 989, 1339
PspPPI RGGWCCY 1 cut(s) 989
PstNI CAGNNNCTG 1 cut(s) 704
PsuI RGATCY 1 cut(s) 1102
PsyI GACNNNGTC 2 cut(s) 224, 1202
RsaI GTAC 3 cut(s) 572, 1248, 1379
RsaNI GTAC 3 cut(s) 571, 1247, 1378
RseI CAYNNNNRTG 2 cut(s) 249, 446
SaqAI TTAA 2 cut(s) 473, 894
SatI GCNGC 3 cut(s) 870, 873, 1323
Sau3AI GATC 6 cut(s) 13, 577, 730, 772, 1102, 1171
Sau96I GGNCC 3 cut(s) 236, 989, 1339
ScaI AGTACT 1 cut(s) 1379
SchI GAGTC 2 cut(s) 629, 905
ScrFI CCNGG 3 cut(s) 394, 395, 1337
SduI GDGCHC 1 cut(s) 394
SfaNI GCATC 6 cut(s) 120, 174, 378, 438, 836, 1141
SfuI TTCGAA 1 cut(s) 1157
SinI GGWCC 2 cut(s) 989, 1339
SmaI CCCGGG 1 cut(s) 395
SmiMI CAYNNNNRTG 2 cut(s) 249, 446
SmlI CTYRAG 1 cut(s) 617
SmoI CTYRAG 1 cut(s) 617
SphI GCATGC 1 cut(s) 509
Sse9I AATT 7 cut(s) 118, 260, 479, 636, 714, 896, 1271
SsiI CCGC 5 cut(s) 50, 825, 887, 1061, 1390
SspMI CTAG 3 cut(s) 590, 864, 1127
StyD4I CCNGG 3 cut(s) 392, 393, 1335
StyI CCWWGG 3 cut(s) 605, 1250, 1298
TaaI ACNGT 4 cut(s) 340, 1023, 1192, 1377
TaiI ACGT 2 cut(s) 938, 1282
TaqI TCGA 8 cut(s) 12, 65, 459, 517, 561, 975, 1083, 1157
TasI AATT 7 cut(s) 118, 260, 479, 636, 714, 896, 1271
TatI WGTACW 1 cut(s) 1377
TfiI GAWTC 3 cut(s) 67, 695, 757
Tru1I TTAA 2 cut(s) 473, 894
Tru9I TTAA 2 cut(s) 473, 894
TscAI CASTG 3 cut(s) 34, 705, 1028
TseI GCWGC 3 cut(s) 869, 872, 1322
TspDTI ATGAA 7 cut(s) 59, 69, 147, 430, 540, 993, 1224
TspMI CCCGGG 1 cut(s) 393
TspRI CASTG 3 cut(s) 34, 705, 1028
Tth111I GACNNNGTC 2 cut(s) 224, 1202
VpaK11BI GGWCC 2 cut(s) 989, 1339
XagI CCTNNNNNAGG 1 cut(s) 794
XapI RAATTY 3 cut(s) 260, 714, 896
XceI RCATGY 3 cut(s) 509, 550, 806
XcmI CCANNNNNNNNNTGG 2 cut(s) 964, 1257
XmaI CCCGGG 1 cut(s) 393
XmiI GTMKAC 2 cut(s) 1206, 1304
XmnI GAANNNNTTC 2 cut(s) 483, 1163
XspI CTAG 3 cut(s) 590, 864, 1127
ZrmI AGTACT 1 cut(s) 1379
Zsp2I ATGCAT 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.