Rw1G002310

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000188
Physical Location & Seq
Reverse (-)
4116894 .. 4118357
1464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G002310.1

Sequence Viewer

Length: 1464 bp
ATGGAAGATGGTACAGACCGTAGTATTTGTCATACATCTATTATGGTAGATGAGGAGGACGATGATGCTTCAGTTGACGACGGTGAAGATGTAGATATAGTACTTGAAGCATCAAAAAACCCCAAGACAGCAAAGCTTCCCAGGTGCATCTTTAAAGTTCCAGAAGTCCTCCGGAGACATAACCTAAAAGCTTATGAGCCTGACGTTGTCTCTATTGGACCCTTTCATCATCCCAAAGATCACAAGCAATTTCAACTAATGGAGGATATGAAACAGAGGTATTTACTCGAACTTCTCTCATGCATGGGTGTTGTAAATCTTAAGACGTTGGTGAAAGATGTTATTGAGTTTTCAGATCAGGAAAGTGAAGGCATTCTCGGCTATGAGGAGCGTGCTCGTCTGTTTTATGCCGAACCACTTGATGATTATAATCATAATGAGTTCATTGAAATGATCATACGTGATGGTTGCTTTATAGTGCAACTGTTTCGGAAACATTACAATAAGAAACTACGGGACACTAATGATCCAATATTTACCATGGATTGCATGTTTCAATACATATGCCATGATCTTTTGCTGCTAGAAAATCAGATTCCTTGGTTTGTTCTTAAGTCTGTATACAGCTTTACTGAGGAAAAGTACCACTATGGTGGCTTTTCCCTCCTTGAACTCATACTCACCGTCTTGAGCTCACAACGACAACTGCGCGATTATTGTGGGTCCTATCTTGATGCTTATGAAGAAGGCAAGGAGGATAAAAGTCAGAACACAATTCTGCACATACTTGATCTCATAAGAACTTCAATTGTCTTCTCATTAGAACCATATCCATTTGAGAATAAGAAACCTTACCACGACTCAAACATCCAGTTGATAAATTCTGCGACAGCTCTCTCAGAAGCAGGCATCAAATTGAAGATGACCGGAAAAAAAAACTATATTGGAGGAAAACACAAGACATTGAAGATGTTCCCGCAGGCATGTAAAAGCATCATGAACATAAAATTCGAAAAAGGGGTTTTAACAATACCACATCTCGCTGTTGGGGAGATGACTGAATCTTTATTCAGGAACCTCATTGCCTTGGAGCAGTGCTGTCACGGTCGTTCGCATAAAATTACTTCATATGCCGTTTTAATGGATAATCTTATTGGTTCTAAAAAGGATATGGAATTTCTATCCGAGAAAAAAATAATAGGTAACTGGCTCAGTGCTGAAGATGGTTACCAGTTCTTCAACAAGCTCCACAATGACACTGTACTCAGCAAGTTCTACTATGGTGGTCTCTGCGCTGAAGTGAAAACATACCAAGTTAACTGGAGAAGGTACCGAGAAGTATTCAAGCGTAACTACTGTTCTGACCCATGGAAAGCGACTTCTTGGTTTGCAGCCTGTGTCCTCCTGTTTCTCACCGTAGTGCAAACCGCATACACCCTTAAGCAATATTATTCTCCTGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

487

Amino Acids

56.59

Weight (kDa)

6.0

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 50 - 471 1.2e-101 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 429
Acc65I GGTACC 1 cut(s) 1329
AccB1I GGYRCC 1 cut(s) 1329
AccI GTMKAC 1 cut(s) 621
AccII CGCG 1 cut(s) 711
AccIII TCCGGA 1 cut(s) 171
AciI CCGC 2 cut(s) 977, 1428
AclWI GGATC 1 cut(s) 521
AcsI RAATTY 3 cut(s) 880, 1007, 1175
AcuI CTGAAG 3 cut(s) 54, 1239, 1317
AfaI GTAC 5 cut(s) 13, 102, 644, 1263, 1331
AflII CTTAAG 3 cut(s) 320, 611, 1439
AjnI CCWGG 1 cut(s) 140
AleI CACNNNNGTG 2 cut(s) 651, 1418
AluBI AGCT 6 cut(s) 136, 191, 627, 693, 893, 1246
AluI AGCT 6 cut(s) 136, 191, 627, 693, 893, 1246
Alw21I GWGCWC 2 cut(s) 397, 695
Alw26I GTCTC 3 cut(s) 169, 214, 1292
AlwI GGATC 1 cut(s) 521
Aor13HI TCCGGA 1 cut(s) 171
ApeKI GCWGC 2 cut(s) 580, 1391
ApoI RAATTY 3 cut(s) 880, 1007, 1175
Asp700I GAANNNNTTC 2 cut(s) 372, 971
Asp718I GGTACC 1 cut(s) 1329
AspLEI GCGC 2 cut(s) 711, 1295
AspS9I GGNCC 2 cut(s) 218, 723
AsuHPI GGTGA 4 cut(s) 95, 343, 673, 1405
AsuII TTCGAA 1 cut(s) 1011
AvaII GGWCC 2 cut(s) 218, 723
BanI GGYRCC 1 cut(s) 1329
BanII GRGCYC 1 cut(s) 695
BbsI GAAGAC 1 cut(s) 805
Bbv12I GWGCWC 2 cut(s) 397, 695
BbvI GCAGC 2 cut(s) 567, 1403
BccI CCATC 3 cut(s) 2, 458, 1217
BceAI ACGGC 1 cut(s) 1118
BcgI CGANNNNNNTGC 2 cut(s) 470, 504
BciT130I CCWGG 1 cut(s) 142
BclI TGATCA 1 cut(s) 453
BcoDI GTCTC 3 cut(s) 169, 214, 1292
BfaI CTAG 2 cut(s) 584, 1462
BfrI CTTAAG 3 cut(s) 320, 611, 1439
BisI GCNGC 2 cut(s) 581, 1392
BlsI GCNGC 2 cut(s) 582, 1393
BmcAI AGTACT 1 cut(s) 102
Bme1390I CCNGG 1 cut(s) 142
Bme18I GGWCC 2 cut(s) 218, 723
BmgT120I GGNCC 2 cut(s) 218, 723
BmiI GGNNCC 4 cut(s) 220, 724, 1076, 1331
BmrFI CCNGG 1 cut(s) 142
BmsI GCATC 6 cut(s) 55, 119, 156, 724, 918, 1002
BpiI GAAGAC 1 cut(s) 805
BpmI CTGGAG 1 cut(s) 1342
Bpu14I TTCGAA 1 cut(s) 1011
BpuEI CTTGAG 1 cut(s) 709
BsaAI YACGTR 1 cut(s) 461
BsaBI GATNNNNATC 1 cut(s) 429
BsaI GGTCTC 1 cut(s) 1292
BsaJI CCNNGG 5 cut(s) 140, 540, 599, 1086, 1367
BsaWI WCCGGW 2 cut(s) 171, 926
Bse1I ACTGG 4 cut(s) 871, 1211, 1231, 1325
Bse3DI GCAATG 1 cut(s) 1080
Bse8I GATNNNNATC 1 cut(s) 429
BseAI TCCGGA 1 cut(s) 171
BseBI CCWGG 1 cut(s) 142
BseDI CCNNGG 5 cut(s) 140, 540, 599, 1086, 1367
BseGI GGATG 2 cut(s) 229, 867
BseJI GATNNNNATC 1 cut(s) 429
BseMI GCAATG 1 cut(s) 1080
BseMII CTCAG 4 cut(s) 624, 912, 1225, 1279
BseNI ACTGG 4 cut(s) 871, 1211, 1231, 1325
BseRI GAGGAG 2 cut(s) 68, 401
BseXI GCAGC 2 cut(s) 567, 1403
BsgI GTGCAG 1 cut(s) 764
Bsh1236I CGCG 1 cut(s) 711
Bsh1285I CGRYCG 1 cut(s) 1108
BshNI GGYRCC 1 cut(s) 1329
BsiEI CGRYCG 1 cut(s) 1108
BsiHKAI GWGCWC 2 cut(s) 397, 695
BsiSI CCGG 2 cut(s) 172, 927
BslFI GGGAC 1 cut(s) 530
BsmAI GTCTC 3 cut(s) 169, 214, 1292
BsmFI GGGAC 1 cut(s) 530
BsmI GAATGC 1 cut(s) 372
Bso31I GGTCTC 1 cut(s) 1292
Bsp119I TTCGAA 1 cut(s) 1011
Bsp1286I GDGCHC 2 cut(s) 397, 695
Bsp13I TCCGGA 1 cut(s) 171
Bsp143I GATC 6 cut(s) 238, 355, 453, 526, 571, 790
Bsp19I CCATGG 2 cut(s) 540, 1367
BspACI CCGC 2 cut(s) 977, 1428
BspCNI CTCAG 4 cut(s) 625, 911, 1224, 1278
BspEI TCCGGA 1 cut(s) 171
BspFNI CGCG 1 cut(s) 711
BspHI TCATGA 1 cut(s) 996
BspLI GGNNCC 4 cut(s) 220, 724, 1076, 1331
BspPI GGATC 1 cut(s) 521
BspT104I TTCGAA 1 cut(s) 1011
BspT107I GGYRCC 1 cut(s) 1329
BspTI CTTAAG 3 cut(s) 320, 611, 1439
BspTNI GGTCTC 1 cut(s) 1292
BsrDI GCAATG 1 cut(s) 1080
BsrI ACTGG 4 cut(s) 871, 1211, 1231, 1325
BssECI CCNNGG 5 cut(s) 140, 540, 599, 1086, 1367
BssMI GATC 6 cut(s) 238, 355, 453, 526, 571, 790
BssNAI GTATAC 1 cut(s) 622
BssT1I CCWWGG 4 cut(s) 540, 599, 1086, 1367
Bst1107I GTATAC 1 cut(s) 622
Bst2UI CCWGG 1 cut(s) 142
Bst4CI ACNGT 8 cut(s) 20, 83, 486, 685, 1106, 1261, 1358, 1417
BstAFI CTTAAG 3 cut(s) 320, 611, 1439
BstBAI YACGTR 1 cut(s) 461
BstBI TTCGAA 1 cut(s) 1011
BstC8I GCNNGC 3 cut(s) 393, 907, 981
BstDEI CTNAG 4 cut(s) 633, 898, 1211, 1265
BstDSI CCRYGG 2 cut(s) 540, 1367
BstEII GGTNACC 1 cut(s) 1226
BstF5I GGATG 2 cut(s) 229, 867
BstFNI CGCG 1 cut(s) 711
BstHHI GCGC 2 cut(s) 711, 1295
BstKTI GATC 6 cut(s) 241, 358, 456, 529, 574, 793
BstMAI GTCTC 3 cut(s) 169, 214, 1292
BstMBI GATC 6 cut(s) 238, 355, 453, 526, 571, 790
BstMCI CGRYCG 1 cut(s) 1108
BstMWI GCNNNNNNNGC 1 cut(s) 378
BstNI CCWGG 1 cut(s) 142
BstNSI RCATGY 2 cut(s) 553, 987
BstPI GGTNACC 1 cut(s) 1226
BstSCI CCNGG 1 cut(s) 140
BstUI CGCG 1 cut(s) 711
BstV1I GCAGC 2 cut(s) 567, 1403
BstV2I GAAGAC 1 cut(s) 805
BstXI CCANNNNNNTGG 1 cut(s) 653
BstZ17I GTATAC 1 cut(s) 622
BtgI CCRYGG 2 cut(s) 540, 1367
BtsCI GGATG 2 cut(s) 229, 867
BtsI GCAGTG 1 cut(s) 1100
BtsIMutI CAGTG 3 cut(s) 1100, 1219, 1257
Cac8I GCNNGC 3 cut(s) 393, 907, 981
CciI TCATGA 1 cut(s) 996
CfoI GCGC 2 cut(s) 711, 1295
Cfr13I GGNCC 2 cut(s) 218, 723
Csp6I GTAC 5 cut(s) 12, 101, 643, 1262, 1330
CviAII CATG 8 cut(s) 300, 304, 541, 550, 569, 984, 997, 1368
CviQI GTAC 5 cut(s) 12, 101, 643, 1262, 1330
DdeI CTNAG 4 cut(s) 633, 898, 1211, 1265
DpnI GATC 6 cut(s) 240, 357, 455, 528, 573, 792
DpnII GATC 6 cut(s) 238, 355, 453, 526, 571, 790
DraI TTTAAA 1 cut(s) 154
Ecl136II GAGCTC 1 cut(s) 693
Eco130I CCWWGG 4 cut(s) 540, 599, 1086, 1367
Eco24I GRGCYC 1 cut(s) 695
Eco31I GGTCTC 1 cut(s) 1292
Eco47I GGWCC 2 cut(s) 218, 723
Eco53kI GAGCTC 1 cut(s) 693
Eco57I CTGAAG 3 cut(s) 54, 1239, 1317
Eco91I GGTNACC 1 cut(s) 1226
EcoICRI GAGCTC 1 cut(s) 693
EcoO109I RGGNCCY 1 cut(s) 723
EcoO65I GGTNACC 1 cut(s) 1226
EcoRII CCWGG 1 cut(s) 140
EcoT14I CCWWGG 4 cut(s) 540, 599, 1086, 1367
EcoT22I ATGCAT 1 cut(s) 305
EcoT38I GRGCYC 1 cut(s) 695
ErhI CCWWGG 4 cut(s) 540, 599, 1086, 1367
FaeI CATG 8 cut(s) 303, 307, 544, 553, 572, 987, 1000, 1371
FaqI GGGAC 1 cut(s) 530
FatI CATG 8 cut(s) 299, 303, 540, 549, 568, 983, 996, 1367
FauI CCCGC 1 cut(s) 984
FauNDI CATATG 2 cut(s) 563, 1129
FbaI TGATCA 1 cut(s) 453
FblI GTMKAC 1 cut(s) 621
Fnu4HI GCNGC 2 cut(s) 581, 1392
FokI GGATG 2 cut(s) 216, 854
FriOI GRGCYC 1 cut(s) 695
Fsp4HI GCNGC 2 cut(s) 581, 1392
FspBI CTAG 2 cut(s) 584, 1462
GlaI GCGC 2 cut(s) 710, 1294
GluI GCNGC 2 cut(s) 581, 1392
GsuI CTGGAG 1 cut(s) 1342
HapII CCGG 2 cut(s) 172, 927
HhaI GCGC 2 cut(s) 711, 1295
Hin1II CATG 8 cut(s) 303, 307, 544, 553, 572, 987, 1000, 1371
Hin6I GCGC 2 cut(s) 709, 1293
HinP1I GCGC 2 cut(s) 709, 1293
HincII GTYRAC 2 cut(s) 76, 1318
HindII GTYRAC 2 cut(s) 76, 1318
HindIII AAGCTT 2 cut(s) 134, 189
HinfI GANTC 3 cut(s) 595, 860, 1061
HpaI GTTAAC 1 cut(s) 1318
HpaII CCGG 2 cut(s) 172, 927
HphI GGTGA 4 cut(s) 95, 343, 673, 1405
Hpy166II GTNNAC 3 cut(s) 76, 622, 1318
Hpy188I TCNGA 7 cut(s) 355, 492, 594, 768, 901, 1186, 1363
Hpy188III TCNNGA 7 cut(s) 161, 172, 359, 688, 731, 997, 1072
Hpy8I GTNNAC 3 cut(s) 76, 622, 1318
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 3 cut(s) 362, 740, 1320
HpyCH4III ACNGT 8 cut(s) 20, 83, 486, 685, 1106, 1261, 1358, 1417
HpyCH4IV ACGT 3 cut(s) 204, 326, 460
HpyCH4V TGCA 7 cut(s) 147, 303, 481, 549, 781, 1391, 1423
HpyF10VI GCNNNNNNNGC 1 cut(s) 378
HpyF3I CTNAG 4 cut(s) 633, 898, 1211, 1265
HpySE526I ACGT 3 cut(s) 204, 326, 460
Hsp92II CATG 8 cut(s) 303, 307, 544, 553, 572, 987, 1000, 1371
HspAI GCGC 2 cut(s) 709, 1293
Kpn2I TCCGGA 1 cut(s) 171
KpnI GGTACC 1 cut(s) 1333
Ksp22I TGATCA 1 cut(s) 453
KspAI GTTAAC 1 cut(s) 1318
Kzo9I GATC 6 cut(s) 238, 355, 453, 526, 571, 790
LmnI GCTCC 3 cut(s) 388, 1090, 1251
Lsp1109I GCAGC 2 cut(s) 567, 1403
LweI GCATC 6 cut(s) 55, 119, 156, 724, 918, 1002
MaeI CTAG 2 cut(s) 584, 1462
MaeII ACGT 3 cut(s) 204, 326, 460
MaeIII GTNAC 4 cut(s) 1100, 1202, 1226, 1349
MalI GATC 6 cut(s) 240, 357, 455, 528, 573, 792
MboI GATC 6 cut(s) 238, 355, 453, 526, 571, 790
MboII GAAGA 8 cut(s) 17, 98, 755, 805, 931, 979, 1228, 1232
MfeI CAATTG 1 cut(s) 807
MhlI GDGCHC 2 cut(s) 397, 695
MluCI AATT 8 cut(s) 248, 774, 807, 880, 914, 1007, 1119, 1175
MlyI GAGTC 1 cut(s) 854
Mph1103I ATGCAT 1 cut(s) 305
MroI TCCGGA 1 cut(s) 171
MroXI GAANNNNTTC 2 cut(s) 372, 971
MseI TTAA 7 cut(s) 153, 321, 612, 1025, 1139, 1317, 1440
MslI CAYNNNNRTG 3 cut(s) 449, 651, 1418
MspCI CTTAAG 3 cut(s) 320, 611, 1439
MspI CCGG 2 cut(s) 172, 927
MspR9I CCNGG 1 cut(s) 142
MunI CAATTG 1 cut(s) 807
Mva1269I GAATGC 1 cut(s) 372
MvaI CCWGG 1 cut(s) 142
MvnI CGCG 1 cut(s) 711
MwoI GCNNNNNNNGC 1 cut(s) 378
NcoI CCATGG 2 cut(s) 540, 1367
NdeI CATATG 2 cut(s) 563, 1129
NdeII GATC 6 cut(s) 238, 355, 453, 526, 571, 790
NlaIII CATG 8 cut(s) 303, 307, 544, 553, 572, 987, 1000, 1371
NlaIV GGNNCC 4 cut(s) 220, 724, 1076, 1331
NmeAIII GCCGAG 1 cut(s) 357
NmuCI GTSAC 1 cut(s) 1100
NsiI ATGCAT 1 cut(s) 305
NspI RCATGY 2 cut(s) 553, 987
NspV TTCGAA 1 cut(s) 1011
OliI CACNNNNGTG 2 cut(s) 651, 1418
PagI TCATGA 1 cut(s) 996
PctI GAATGC 1 cut(s) 372
PdmI GAANNNNTTC 2 cut(s) 372, 971
PfeI GAWTC 2 cut(s) 595, 1061
PflFI GACNNNGTC 1 cut(s) 206
PkrI GCNGC 2 cut(s) 582, 1393
PleI GAGTC 1 cut(s) 854
PpsI GAGTC 1 cut(s) 854
Ppu21I YACGTR 1 cut(s) 461
PpuMI RGGWCCY 1 cut(s) 723
PsiI TTATAA 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 695
Psp5II RGGWCCY 1 cut(s) 723
Psp6I CCWGG 1 cut(s) 140
PspEI GGTNACC 1 cut(s) 1226
PspGI CCWGG 1 cut(s) 140
PspN4I GGNNCC 4 cut(s) 220, 724, 1076, 1331
PspPI GGNCC 2 cut(s) 218, 723
PspPPI RGGWCCY 1 cut(s) 723
PsrI GAACNNNNNNTAC 2 cut(s) 1342, 1374
PsyI GACNNNGTC 1 cut(s) 206
RsaI GTAC 5 cut(s) 13, 102, 644, 1263, 1331
RsaNI GTAC 5 cut(s) 12, 101, 643, 1262, 1330
RseI CAYNNNNRTG 3 cut(s) 449, 651, 1418
SacI GAGCTC 1 cut(s) 695
SaqAI TTAA 7 cut(s) 153, 321, 612, 1025, 1139, 1317, 1440
SatI GCNGC 2 cut(s) 581, 1392
Sau3AI GATC 6 cut(s) 238, 355, 453, 526, 571, 790
Sau96I GGNCC 2 cut(s) 218, 723
ScaI AGTACT 1 cut(s) 102
SchI GAGTC 1 cut(s) 854
ScrFI CCNGG 1 cut(s) 142
SduI GDGCHC 2 cut(s) 397, 695
SfaNI GCATC 6 cut(s) 55, 119, 156, 724, 918, 1002
SfuI TTCGAA 1 cut(s) 1011
SinI GGWCC 2 cut(s) 218, 723
SmiMI CAYNNNNRTG 3 cut(s) 449, 651, 1418
SmlI CTYRAG 4 cut(s) 320, 611, 688, 1439
SmoI CTYRAG 4 cut(s) 320, 611, 688, 1439
Sse9I AATT 8 cut(s) 248, 774, 807, 880, 914, 1007, 1119, 1175
SsiI CCGC 2 cut(s) 977, 1428
SspI AATATT 2 cut(s) 534, 1448
SspMI CTAG 2 cut(s) 584, 1462
SstI GAGCTC 1 cut(s) 695
StyD4I CCNGG 1 cut(s) 140
StyI CCWWGG 4 cut(s) 540, 599, 1086, 1367
TaaI ACNGT 8 cut(s) 20, 83, 486, 685, 1106, 1261, 1358, 1417
TaiI ACGT 3 cut(s) 207, 329, 463
TaqI TCGA 2 cut(s) 288, 1011
TasI AATT 8 cut(s) 248, 774, 807, 880, 914, 1007, 1119, 1175
TatI WGTACW 2 cut(s) 100, 1261
TfiI GAWTC 2 cut(s) 595, 1061
Tru1I TTAA 7 cut(s) 153, 321, 612, 1025, 1139, 1317, 1440
Tru9I TTAA 7 cut(s) 153, 321, 612, 1025, 1139, 1317, 1440
TscAI CASTG 3 cut(s) 1100, 1219, 1264
TseFI GTSAC 1 cut(s) 1100
TseI GCWGC 2 cut(s) 580, 1391
Tsp45I GTSAC 1 cut(s) 1100
TspDTI ATGAA 6 cut(s) 215, 284, 433, 756, 1013, 1116
TspRI CASTG 3 cut(s) 1100, 1219, 1264
Tth111I GACNNNGTC 1 cut(s) 206
Vha464I CTTAAG 3 cut(s) 320, 611, 1439
VpaK11BI GGWCC 2 cut(s) 218, 723
XapI RAATTY 3 cut(s) 880, 1007, 1175
XceI RCATGY 2 cut(s) 553, 987
XmiI GTMKAC 1 cut(s) 621
XmnI GAANNNNTTC 2 cut(s) 372, 971
XspI CTAG 2 cut(s) 584, 1462
ZrmI AGTACT 1 cut(s) 102
Zsp2I ATGCAT 1 cut(s) 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.