Rmu_sc0003920.1_g000011

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003920.1
OG0000188
Physical Location & Seq
Forward (+)
32505 .. 35868
3364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003920.1_g000011.1.cds

Sequence Viewer

Length: 1899 bp
atgggaggtagcagtgatatagaaaagggtgaagtgaatgaaagcgttccagttcatctagaacgtaaaggtcattctcaaaagaaaaaaaaagaacgtaaaggtatgactgttgaagaaaggaaaagaaccttctgtaaagagcttttggaggccaaatcacctgtgcctgcttcgtgttgcatcttcaaagttcccgaggtgctacgaagacaaaaaaaggaggcatacgcacccgacatagtctcaatcgggccctttcatcgaggtgctaaaaaattacaactcgtggaaaatgtgaaaaagtggtatttaaaatgtcttctcgcgcgccagctcccgaacccgacaggattgagcttgaatgagttgcttgaaagcatgagcctagatagcatgactctgagtgtggagaggtgggctgaaatgatcaagggagatgaactggataaacgcgcccggggttattattcagacccatgcaatcatcttgaccaaaacaacttcatagatatgctcatactcgatggttgtttcttgatagaattatttcggaaggcatctgttccatcacgacaagataatgacgaccctattttcaacgtgccttgtatgctcgaatatctataccatgatcttctgttactcgaaaatcagctgccctggtctgtgctggagtttttctatgagctaattgagcgtggcaacactaactctctcaatgcattggtattcgacttcttcaaaaattcagtggctgatgctgaaattttgaggaaccccgatccttctggtgagattcttcacatacttgatttgattagagctgcactcgttcataccccaagttcgaattcttccgccacaaaagacatccacctgccgcaaaggatacctagtgctgctattctttcagaggcaggcgttatatttaaaaaggccaaagaaagttgcatattgaagataacgttcaacaatggcgttttcaccattcctcagttggctatcgatgagagtacaggtcctttgttcaggaaccttatggccttcgagcagtgttatcacagttgcgagcacaggataacatcctatgcggttttgatggatagcctcatcgatacgaacaaggatgtggatcttctatgtgaggaagggataatagccaactggttgagtgctgatgatgcttcgaagttcttcaacgatctatacactgacaccacagtcattgattttgtctacgaggatctctgcaaaacagtgaataaatatcacaaagctccatgcaacagaggcgtagctaggattcgacaatgggcgattggaggtggctctgtgggtcacagcgattggagccttggaggtggctcagtggctggagcctggaagctggaactctggaagagtggaaggcggaaccgatatgaagttttgaacaaggagacggggttggtgtttgagagtcgggaaagactgattactttatcaccactaattgagagtggtaaccctgattctctcagtaaattagtattggacctcttcaaaaattcagtggctgatgccaaaattttgagcgaccccaagcctgagtcttctggtaagattcttcacatacttgatctgatgagaactgccctcgttggtatcccaggttcgaaggctacctccaaatcaaacaaccacatgccgcaaaggatacctagtgctgctattctttcagaggcaggcgttatatttaaaaggggtaaagaaggttgcatattgaacataaagttcaaaggtggcgtttttaccgttcttccaatggctatcgatgagaggacatgtcctttgttcaggaaccttatggccttcgagcagtgttatcacagttgcgcgcgcacgatcacatcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

632

Amino Acids

70.86

Weight (kDa)

6.94

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 888
AasI GACNNNNNNGTC 1 cut(s) 1223
Acc36I ACCTGC 1 cut(s) 888
AccI GTMKAC 1 cut(s) 1239
AccII CGCG 5 cut(s) 329, 331, 456, 1880, 1882
AciI CCGC 5 cut(s) 861, 884, 1094, 1414, 1691
AclI AACGTT 1 cut(s) 968
AclWI GGATC 3 cut(s) 779, 1143, 1254
AcsI RAATTY 5 cut(s) 748, 768, 853, 1549, 1569
AfaI GTAC 1 cut(s) 1018
AflIII ACRYGT 1 cut(s) 1826
AjnI CCWGG 3 cut(s) 662, 1382, 1651
AjuI GAANNNNNNNTTGG 2 cut(s) 838, 870
AluBI AGCT 9 cut(s) 145, 337, 360, 658, 691, 827, 1280, 1301, 1390
AluI AGCT 9 cut(s) 145, 337, 360, 658, 691, 827, 1280, 1301, 1390
Alw21I GWGCWC 1 cut(s) 1077
Alw26I GTCTC 2 cut(s) 250, 1436
AlwI GGATC 3 cut(s) 779, 1143, 1254
AlwNI CAGNNNCTG 3 cut(s) 758, 1376, 1559
Ama87I CYCGRG 2 cut(s) 197, 459
AoxI GGCC 5 cut(s) 153, 254, 939, 1044, 1851
ApaI GGGCCC 1 cut(s) 258
ApeKI GCWGC 4 cut(s) 658, 827, 902, 1709
ApoI RAATTY 5 cut(s) 748, 768, 853, 1549, 1569
ArsI GACNNNNNNTTYG 2 cut(s) 1816, 1848
Asp700I GAANNNNTTC 3 cut(s) 45, 549, 1196
AspLEI GCGC 6 cut(s) 331, 333, 458, 1880, 1882, 1884
AspS9I GGNCC 4 cut(s) 254, 255, 1022, 1537
AsuC2I CCSGG 2 cut(s) 460, 461
AsuHPI GGTGA 5 cut(s) 41, 153, 806, 979, 1479
AsuII TTCGAA 3 cut(s) 851, 1190, 1658
AvaI CYCGRG 2 cut(s) 197, 459
AvaII GGWCC 2 cut(s) 1022, 1537
BaeGI GKGCMC 1 cut(s) 258
BanII GRGCYC 1 cut(s) 258
BauI CACGAG 1 cut(s) 287
BbsI GAAGAC 3 cut(s) 217, 314, 1587
Bbv12I GWGCWC 1 cut(s) 1077
BbvI GCAGC 4 cut(s) 645, 814, 889, 1696
BccI CCATC 3 cut(s) 521, 577, 1096
BciT130I CCWGG 3 cut(s) 664, 1384, 1653
BciVI GTATCC 3 cut(s) 885, 1658, 1692
BclI TGATCA 1 cut(s) 429
BcnI CCSGG 2 cut(s) 460, 461
BcoDI GTCTC 2 cut(s) 250, 1436
BfaI CTAG 5 cut(s) 59, 389, 897, 1302, 1704
BfuAI ACCTGC 1 cut(s) 888
BfuI GTATCC 3 cut(s) 885, 1658, 1692
BisI GCNGC 6 cut(s) 659, 828, 884, 903, 1691, 1710
BlsI GCNGC 6 cut(s) 660, 829, 885, 904, 1692, 1711
Bme1390I CCNGG 5 cut(s) 460, 461, 664, 1384, 1653
Bme18I GGWCC 2 cut(s) 1022, 1537
BmeT110I CYCGRG 2 cut(s) 197, 459
BmgT120I GGNCC 4 cut(s) 254, 255, 1022, 1537
BmiI GGNNCC 7 cut(s) 256, 779, 1037, 1355, 1381, 1418, 1844
BmrFI CCNGG 5 cut(s) 460, 461, 664, 1384, 1653
BmsI GCATC 5 cut(s) 192, 569, 751, 1174, 1552
BpiI GAAGAC 3 cut(s) 217, 314, 1587
BplI GAGNNNNNCTC 2 cut(s) 816, 848
BpmI CTGGAG 2 cut(s) 695, 1398
Bpu14I TTCGAA 3 cut(s) 851, 1190, 1658
BpuMI CCSGG 2 cut(s) 460, 461
Bsa29I ATCGAT 3 cut(s) 1008, 1116, 1815
BsaBI GATNNNNATC 1 cut(s) 1134
BsaJI CCNNGG 6 cut(s) 198, 459, 460, 662, 1357, 1651
BsaXI ACNNNNNCTCC 2 cut(s) 1433, 1463
Bse1I ACTGG 3 cut(s) 50, 450, 1172
Bse8I GATNNNNATC 1 cut(s) 1134
BseBI CCWGG 3 cut(s) 664, 1384, 1653
BseCI ATCGAT 3 cut(s) 1008, 1116, 1815
BseDI CCNNGG 6 cut(s) 198, 459, 460, 662, 1357, 1651
BseGI GGATG 4 cut(s) 873, 1085, 1135, 1892
BseJI GATNNNNATC 1 cut(s) 1134
BseMII CTCAG 5 cut(s) 395, 1010, 1383, 1534, 1581
BseNI ACTGG 3 cut(s) 50, 450, 1172
BsePI GCGCGC 3 cut(s) 329, 1878, 1880
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 4 cut(s) 645, 814, 889, 1696
BsgI GTGCAG 1 cut(s) 813
Bsh1236I CGCG 5 cut(s) 329, 331, 456, 1880, 1882
BshFI GGCC 5 cut(s) 155, 256, 941, 1046, 1853
BshVI ATCGAT 3 cut(s) 1008, 1116, 1815
BsiHKAI GWGCWC 1 cut(s) 1077
BsiHKCI CYCGRG 2 cut(s) 197, 459
BsiSI CCGG 1 cut(s) 460
BsmAI GTCTC 2 cut(s) 250, 1436
BsmBI CGTCTC 1 cut(s) 1436
BsnI GGCC 5 cut(s) 155, 256, 941, 1046, 1853
BsoBI CYCGRG 2 cut(s) 197, 459
Bsp119I TTCGAA 3 cut(s) 851, 1190, 1658
Bsp120I GGGCCC 1 cut(s) 254
Bsp1286I GDGCHC 2 cut(s) 258, 1077
Bsp143I GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
BspACI CCGC 5 cut(s) 861, 884, 1094, 1414, 1691
BspANI GGCC 5 cut(s) 155, 256, 941, 1046, 1853
BspCNI CTCAG 5 cut(s) 396, 1009, 1382, 1533, 1582
BspDI ATCGAT 3 cut(s) 1008, 1116, 1815
BspFNI CGCG 5 cut(s) 329, 331, 456, 1880, 1882
BspLI GGNNCC 7 cut(s) 256, 779, 1037, 1355, 1381, 1418, 1844
BspMI ACCTGC 1 cut(s) 888
BspPI GGATC 3 cut(s) 779, 1143, 1254
BspT104I TTCGAA 3 cut(s) 851, 1190, 1658
BsrI ACTGG 3 cut(s) 50, 450, 1172
BssECI CCNNGG 6 cut(s) 198, 459, 460, 662, 1357, 1651
BssHII GCGCGC 3 cut(s) 329, 1878, 1880
BssMI GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
BssSI CACGAG 1 cut(s) 287
BssT1I CCWWGG 1 cut(s) 1357
Bst2BI CACGAG 1 cut(s) 287
Bst2UI CCWGG 3 cut(s) 664, 1384, 1653
Bst4CI ACNGT 6 cut(s) 112, 1067, 1225, 1261, 1798, 1874
Bst6I CTCTTC 2 cut(s) 1397, 1547
BstBI TTCGAA 3 cut(s) 851, 1190, 1658
BstC8I GCNNGC 8 cut(s) 171, 331, 335, 922, 1073, 1729, 1880, 1882
BstDEI CTNAG 5 cut(s) 404, 996, 1369, 1520, 1590
BstEII GGTNACC 1 cut(s) 1505
BstF5I GGATG 4 cut(s) 873, 1085, 1135, 1892
BstFNI CGCG 5 cut(s) 329, 331, 456, 1880, 1882
BstHHI GCGC 6 cut(s) 331, 333, 458, 1880, 1882, 1884
BstKTI GATC 8 cut(s) 432, 637, 787, 1138, 1207, 1249, 1624, 1890
BstMAI GTCTC 2 cut(s) 250, 1436
BstMBI GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
BstMWI GCNNNNNNNGC 6 cut(s) 393, 613, 697, 1184, 1293, 1353
BstNI CCWGG 3 cut(s) 664, 1384, 1653
BstNSI RCATGY 2 cut(s) 1690, 1830
BstPI GGTNACC 1 cut(s) 1505
BstSCI CCNGG 5 cut(s) 458, 459, 662, 1382, 1651
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 5 cut(s) 329, 331, 456, 1880, 1882
BstV1I GCAGC 4 cut(s) 645, 814, 889, 1696
BstV2I GAAGAC 3 cut(s) 217, 314, 1587
BstX2I RGATCY 2 cut(s) 1135, 1246
BstYI RGATCY 2 cut(s) 1135, 1246
Bsu15I ATCGAT 3 cut(s) 1008, 1116, 1815
BsuI GTATCC 3 cut(s) 885, 1658, 1692
BsuRI GGCC 5 cut(s) 155, 256, 941, 1046, 1853
BsuTUI ATCGAT 3 cut(s) 1008, 1116, 1815
BtsCI GGATG 4 cut(s) 873, 1085, 1135, 1892
BtsI GCAGTG 3 cut(s) 19, 1061, 1868
BtsIMutI CAGTG 8 cut(s) 19, 759, 1061, 1212, 1266, 1377, 1560, 1868
BveI ACCTGC 1 cut(s) 888
Cac8I GCNNGC 8 cut(s) 171, 331, 335, 922, 1073, 1729, 1880, 1882
CaiI CAGNNNCTG 3 cut(s) 758, 1376, 1559
CfoI GCGC 6 cut(s) 331, 333, 458, 1880, 1882, 1884
Cfr13I GGNCC 4 cut(s) 254, 255, 1022, 1537
Cfr9I CCCGGG 1 cut(s) 459
ClaI ATCGAT 3 cut(s) 1008, 1116, 1815
Csp6I GTAC 1 cut(s) 1017
CspCI CAANNNNNGTGG 2 cut(s) 1210, 1245
CviAII CATG 7 cut(s) 382, 397, 480, 632, 1284, 1687, 1827
CviQI GTAC 1 cut(s) 1017
DdeI CTNAG 5 cut(s) 404, 996, 1369, 1520, 1590
DpnI GATC 8 cut(s) 431, 636, 786, 1137, 1206, 1248, 1623, 1889
DpnII GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
DraI TTTAAA 3 cut(s) 315, 934, 1741
DrdI GACNNNNNNGTC 1 cut(s) 1223
DseDI GACNNNNNNGTC 1 cut(s) 1223
Eam1104I CTCTTC 2 cut(s) 1397, 1547
EarI CTCTTC 2 cut(s) 1397, 1547
EciI GGCGGA 2 cut(s) 850, 1429
Eco130I CCWWGG 1 cut(s) 1357
Eco24I GRGCYC 1 cut(s) 258
Eco47I GGWCC 2 cut(s) 1022, 1537
Eco88I CYCGRG 2 cut(s) 197, 459
Eco91I GGTNACC 1 cut(s) 1505
EcoO109I RGGNCCY 2 cut(s) 255, 1022
EcoO65I GGTNACC 1 cut(s) 1505
EcoRI GAATTC 1 cut(s) 853
EcoRII CCWGG 3 cut(s) 662, 1382, 1651
EcoT14I CCWWGG 1 cut(s) 1357
EcoT22I ATGCAT 1 cut(s) 727
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 1357
Esp3I CGTCTC 1 cut(s) 1436
FaeI CATG 7 cut(s) 385, 400, 483, 635, 1287, 1690, 1830
FatI CATG 7 cut(s) 381, 396, 479, 631, 1283, 1686, 1826
FbaI TGATCA 1 cut(s) 429
FblI GTMKAC 1 cut(s) 1239
Fnu4HI GCNGC 6 cut(s) 659, 828, 884, 903, 1691, 1710
FokI GGATG 4 cut(s) 860, 1072, 1142, 1879
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 6 cut(s) 659, 828, 884, 903, 1691, 1710
FspBI CTAG 5 cut(s) 59, 389, 897, 1302, 1704
GlaI GCGC 6 cut(s) 330, 332, 457, 1879, 1881, 1883
GluI GCNGC 6 cut(s) 659, 828, 884, 903, 1691, 1710
GsuI CTGGAG 2 cut(s) 695, 1398
HaeIII GGCC 5 cut(s) 155, 256, 941, 1046, 1853
HapII CCGG 1 cut(s) 460
HhaI GCGC 6 cut(s) 331, 333, 458, 1880, 1882, 1884
Hin1II CATG 7 cut(s) 385, 400, 483, 635, 1287, 1690, 1830
Hin6I GCGC 6 cut(s) 329, 331, 456, 1878, 1880, 1882
HinP1I GCGC 6 cut(s) 329, 331, 456, 1878, 1880, 1882
HinfI GANTC 7 cut(s) 400, 799, 1306, 1462, 1514, 1592, 1606
HpaII CCGG 1 cut(s) 460
HphI GGTGA 5 cut(s) 41, 153, 806, 979, 1479
Hpy166II GTNNAC 1 cut(s) 1240
Hpy188I TCNGA 6 cut(s) 405, 475, 555, 916, 1626, 1723
Hpy8I GTNNAC 1 cut(s) 1240
HpyAV CCTTC 9 cut(s) 142, 550, 798, 1057, 1145, 1404, 1654, 1748, 1864
HpyCH4III ACNGT 6 cut(s) 112, 1067, 1225, 1261, 1798, 1874
HpyCH4IV ACGT 4 cut(s) 64, 97, 603, 968
HpyCH4V TGCA 8 cut(s) 183, 483, 725, 830, 954, 1254, 1287, 1761
HpyF10VI GCNNNNNNNGC 6 cut(s) 393, 613, 697, 1184, 1293, 1353
HpyF3I CTNAG 5 cut(s) 404, 996, 1369, 1520, 1590
HpySE526I ACGT 4 cut(s) 64, 97, 603, 968
Hsp92II CATG 7 cut(s) 385, 400, 483, 635, 1287, 1690, 1830
HspAI GCGC 6 cut(s) 329, 331, 456, 1878, 1880, 1882
Ksp22I TGATCA 1 cut(s) 429
Kzo9I GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
LmnI GCTCC 4 cut(s) 342, 1285, 1353, 1379
Lsp1109I GCAGC 4 cut(s) 645, 814, 889, 1696
LweI GCATC 5 cut(s) 192, 569, 751, 1174, 1552
MaeI CTAG 5 cut(s) 59, 389, 897, 1302, 1704
MaeII ACGT 4 cut(s) 64, 97, 603, 968
MaeIII GTNAC 3 cut(s) 642, 1340, 1505
MalI GATC 8 cut(s) 431, 636, 786, 1137, 1206, 1248, 1623, 1889
MboI GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
MflI RGATCY 2 cut(s) 1135, 1246
MhlI GDGCHC 2 cut(s) 258, 1077
MlyI GAGTC 3 cut(s) 394, 1471, 1601
Mph1103I ATGCAT 1 cut(s) 727
MroXI GAANNNNTTC 3 cut(s) 45, 549, 1196
MseI TTAA 3 cut(s) 314, 933, 1740
MslI CAYNNNNRTG 2 cut(s) 267, 512
MspA1I CMGCKG 1 cut(s) 658
MspI CCGG 1 cut(s) 460
MspR9I CCNGG 5 cut(s) 460, 461, 664, 1384, 1653
MvaI CCWGG 3 cut(s) 664, 1384, 1653
MvnI CGCG 5 cut(s) 329, 331, 456, 1880, 1882
MwoI GCNNNNNNNGC 6 cut(s) 393, 613, 697, 1184, 1293, 1353
NciI CCSGG 2 cut(s) 460, 461
NdeII GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
NlaIII CATG 7 cut(s) 385, 400, 483, 635, 1287, 1690, 1830
NlaIV GGNNCC 7 cut(s) 256, 779, 1037, 1355, 1381, 1418, 1844
NmuCI GTSAC 1 cut(s) 1340
NsiI ATGCAT 1 cut(s) 727
NspI RCATGY 2 cut(s) 1690, 1830
NspV TTCGAA 3 cut(s) 851, 1190, 1658
PaqCI CACCTGC 1 cut(s) 888
PauI GCGCGC 3 cut(s) 329, 1878, 1880
PciI ACATGT 1 cut(s) 1826
PdmI GAANNNNTTC 3 cut(s) 45, 549, 1196
PfeI GAWTC 4 cut(s) 799, 1306, 1514, 1606
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 6 cut(s) 660, 829, 885, 904, 1692, 1711
PleI GAGTC 3 cut(s) 394, 1470, 1600
PpsI GAGTC 3 cut(s) 394, 1470, 1600
PpuMI RGGWCCY 1 cut(s) 1022
PscI ACATGT 1 cut(s) 1826
Psp1406I AACGTT 1 cut(s) 968
Psp5II RGGWCCY 1 cut(s) 1022
Psp6I CCWGG 3 cut(s) 662, 1382, 1651
PspEI GGTNACC 1 cut(s) 1505
PspGI CCWGG 3 cut(s) 662, 1382, 1651
PspN4I GGNNCC 7 cut(s) 256, 779, 1037, 1355, 1381, 1418, 1844
PspOMI GGGCCC 1 cut(s) 254
PspPI GGNCC 4 cut(s) 254, 255, 1022, 1537
PspPPI RGGWCCY 1 cut(s) 1022
PsrI GAACNNNNNNTAC 2 cut(s) 1639, 1671
PstNI CAGNNNCTG 3 cut(s) 758, 1376, 1559
PsuI RGATCY 2 cut(s) 1135, 1246
PsyI GACNNNGTC 1 cut(s) 242
PteI GCGCGC 3 cut(s) 329, 1878, 1880
PvuII CAGCTG 1 cut(s) 658
RsaI GTAC 1 cut(s) 1018
RsaNI GTAC 1 cut(s) 1017
RseI CAYNNNNRTG 2 cut(s) 267, 512
SaqAI TTAA 3 cut(s) 314, 933, 1740
SatI GCNGC 6 cut(s) 659, 828, 884, 903, 1691, 1710
Sau3AI GATC 8 cut(s) 429, 634, 784, 1135, 1204, 1246, 1621, 1887
Sau96I GGNCC 4 cut(s) 254, 255, 1022, 1537
SchI GAGTC 3 cut(s) 394, 1471, 1601
ScrFI CCNGG 5 cut(s) 460, 461, 664, 1384, 1653
SduI GDGCHC 2 cut(s) 258, 1077
SfaNI GCATC 5 cut(s) 192, 569, 751, 1174, 1552
SfuI TTCGAA 3 cut(s) 851, 1190, 1658
SinI GGWCC 2 cut(s) 1022, 1537
SmaI CCCGGG 1 cut(s) 461
SmiMI CAYNNNNRTG 2 cut(s) 267, 512
SsiI CCGC 5 cut(s) 861, 884, 1094, 1414, 1691
SspMI CTAG 5 cut(s) 59, 389, 897, 1302, 1704
StyD4I CCNGG 5 cut(s) 458, 459, 662, 1382, 1651
StyI CCWWGG 1 cut(s) 1357
TaaI ACNGT 6 cut(s) 112, 1067, 1225, 1261, 1798, 1874
TaiI ACGT 4 cut(s) 67, 100, 606, 971
TatI WGTACW 1 cut(s) 1016
TauI GCSGC 2 cut(s) 886, 1693
TfiI GAWTC 4 cut(s) 799, 1306, 1514, 1606
Tru1I TTAA 3 cut(s) 314, 933, 1740
Tru9I TTAA 3 cut(s) 314, 933, 1740
TscAI CASTG 8 cut(s) 19, 759, 1061, 1219, 1266, 1377, 1560, 1868
TseFI GTSAC 1 cut(s) 1340
TseI GCWGC 4 cut(s) 658, 827, 902, 1709
Tsp45I GTSAC 1 cut(s) 1340
TspDTI ATGAA 7 cut(s) 44, 54, 251, 456, 496, 827, 1440
TspMI CCCGGG 1 cut(s) 459
TspRI CASTG 8 cut(s) 19, 759, 1061, 1219, 1266, 1377, 1560, 1868
Tth111I GACNNNGTC 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 1022, 1537
XapI RAATTY 5 cut(s) 748, 768, 853, 1549, 1569
XbaI TCTAGA 1 cut(s) 58
XceI RCATGY 2 cut(s) 1690, 1830
XcmI CCANNNNNNNNNTGG 1 cut(s) 997
XmaI CCCGGG 1 cut(s) 459
XmiI GTMKAC 1 cut(s) 1239
XmnI GAANNNNTTC 3 cut(s) 45, 549, 1196
XspI CTAG 5 cut(s) 59, 389, 897, 1302, 1704
Zsp2I ATGCAT 1 cut(s) 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.