MD09G1013500.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000188
Physical Location & Seq
Reverse (-)
853084 .. 854496
1413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1013500.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGGAAAGTGAGAGAAAAACTAACGAAGTTGATGATAGTATTTCCATGGAATCCATTGTTGTAGACAATGGCGGTATTGTAGAAAAATTGAAAAACAACATCGCAAAAAAGCTTCTCCATGATTCGCCATTGCCAGCATCCAGCTGCATCTTCAGAGTTCCCCACCAGGTTCGGCGACAAAACGTACAAGCATACGAACCTGACATCGTCTCAATCGGACCCTTTCACCGTGGCCGCAGTGGCAATCAATTCCGACTCATGGAAAATGTGAAGGGCTGGTACTTACAGCGCCTTCTCTCACAAGCAAACCTAACTTTGGAAACCTTGATCAAAGGTGTCATGGATTTGGACAAGCCTGCTCGCAATTGTTACGCAGAGCCATTGGATCATCTCAACAAGATAGACTTTGTTGAGATGATGGTACTCGACGGATGCTTCCGAATCGAACTATTTCGGAGACTTTACATCCTTGAACTAGACGAGAACGAGAACGACCCTGTTGAACTAGACGAGAACGACACTGTTGAACTAGAAGAGAACGACCCTGTTTTCCATGTACCCTGCATGCTGGGATATCTTCAGCATGACATTCTCCTGCTAGAAAGTCAGCTCCCATGGTTTGTTCTCGAGCGGTTATACGATATAACCACCGTGAAGAATACTTCTAGCGAAGGAAATGCTATCTTCCTAGCCGACCTTGTCGAACACTTCTTCAGCCAATTCATTTGGGGCGATGGTACTGGATTCCGAAAAATTCTGCATCCCTCTCCCAATATCCTGCACATACTTGATCTCATGAGAACCCTGATCGTTATGCCGATTGAAAATTCTGTCTCCCAACAAAATGAAAAGAATAAAGCCCAACGGCTAAGCAAGCGGCAGAGGCTTCCAAACGTGACAACTCTGTCCGAAGCCGGCATTAAATTCCAAAAAAGTTCCGAAATGGACATAAAGTTCAAAAAAGGGGTGCTCACTATTCCACCACTAGAAATTCACGAGCTGACAGGACCGCTCTTCAGGAACCTCATCGCCTTCGAGCAATGCTACGACTTCGACCTGATGATAACGTCTTACGCCGTCCTGATGGATAATCTCATCGATACGAGCAAGGACATCGACCTTCTTTGCGAGAAGGGAATACTGACAAACTGGTTGAGCCCGGAAGATGCTGCACAGTTCTTCAACCATCTGCACAGTGACACGGTGGTCATCAGATTCTACTACGGGGGACTCTGCGATGATGTGAATCAGCATTACAACACTAACTGGAACAAGTGGATGGAAAAGCTGAGGCGCGAGTATTTTGGTACGCCGTGGGCGATTATTTCTTTGGTTGCGGCGTTTATTCTGCTGGTTCTCACAATGTTGCAGACAGTATACACAATTCATCAGTATTATCATCCTCCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

471

Amino Acids

54.46

Weight (kDa)

5.17

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 50 - 453 8.8e-115 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 904, 1205
AccBSI CCGCTC 2 cut(s) 631, 1012
AccI GTMKAC 2 cut(s) 63, 1377
AccII CGCG 1 cut(s) 1296
AciI CCGC 6 cut(s) 72, 235, 631, 877, 1010, 1337
AclWI GGATC 1 cut(s) 393
AcoI YGGCCR 1 cut(s) 232
AcsI RAATTY 4 cut(s) 753, 826, 923, 990
AcuI CTGAAG 4 cut(s) 136, 563, 697, 1000
AfaI GTAC 6 cut(s) 186, 281, 423, 558, 739, 1309
AfiI CCNNNNNNNGG 2 cut(s) 259, 316
AgsI TTSAA 7 cut(s) 91, 473, 503, 527, 824, 958, 1183
AjnI CCWGG 1 cut(s) 165
AloI GAACNNNNNNTCC 2 cut(s) 938, 970
AluBI AGCT 5 cut(s) 112, 144, 610, 1000, 1288
AluI AGCT 5 cut(s) 112, 144, 610, 1000, 1288
Alw21I GWGCWC 1 cut(s) 972
Alw26I GTCTC 3 cut(s) 214, 451, 838
AlwI GGATC 1 cut(s) 393
Ama87I CYCGRG 1 cut(s) 626
AoxI GGCC 1 cut(s) 232
ApeKI GCWGC 2 cut(s) 144, 1169
ApoI RAATTY 4 cut(s) 753, 826, 923, 990
Asp700I GAANNNNTTC 1 cut(s) 450
AspLEI GCGC 2 cut(s) 291, 1296
AspS9I GGNCC 2 cut(s) 218, 1007
AsuC2I CCSGG 1 cut(s) 1160
AsuHPI GGTGA 1 cut(s) 218
AvaI CYCGRG 1 cut(s) 626
AvaII GGWCC 2 cut(s) 218, 1007
BanII GRGCYC 1 cut(s) 1160
BarI GAAGNNNNNNTAC 2 cut(s) 263, 295
BauI CACGAG 1 cut(s) 995
Bbv12I GWGCWC 1 cut(s) 972
BbvCI CCTCAGC 1 cut(s) 1289
BbvI GCAGC 2 cut(s) 131, 1156
BccI CCATC 5 cut(s) 412, 728, 1078, 1194, 1273
BceAI ACGGC 3 cut(s) 881, 1061, 1297
BcgI CGANNNNNNTGC 4 cut(s) 659, 693, 1096, 1130
BciT130I CCWGG 1 cut(s) 167
BclI TGATCA 1 cut(s) 327
BcnI CCSGG 1 cut(s) 1160
BcoDI GTCTC 3 cut(s) 214, 451, 838
BfaI CTAG 7 cut(s) 476, 506, 530, 599, 666, 689, 986
BfoI RGCGCY 1 cut(s) 292
BglI GCCNNNNNGGC 1 cut(s) 240
BisI GCNGC 5 cut(s) 145, 235, 878, 1170, 1338
BlpI GCTNAGC 1 cut(s) 869
BlsI GCNGC 5 cut(s) 146, 236, 879, 1171, 1339
Bme1390I CCNGG 2 cut(s) 167, 1160
Bme18I GGWCC 2 cut(s) 218, 1007
BmeT110I CYCGRG 1 cut(s) 626
BmgT120I GGNCC 2 cut(s) 218, 1007
BmiI GGNNCC 2 cut(s) 220, 1022
BmrFI CCNGG 2 cut(s) 167, 1160
BmsI GCATC 5 cut(s) 146, 156, 422, 769, 1156
Bpu10I CCTNAGC 1 cut(s) 1289
Bpu1102I GCTNAGC 1 cut(s) 869
BpuMI CCSGG 1 cut(s) 1160
Bsa29I ATCGAT 1 cut(s) 1098
BsaBI GATNNNNATC 1 cut(s) 1245
BsaJI CCNNGG 4 cut(s) 45, 229, 614, 1313
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 316
Bse118I RCCGGY 1 cut(s) 914
Bse1I ACTGG 3 cut(s) 745, 1154, 1271
Bse3DI GCAATG 2 cut(s) 128, 1046
Bse8I GATNNNNATC 1 cut(s) 1245
BseBI CCWGG 1 cut(s) 167
BseCI ATCGAT 1 cut(s) 1098
BseDI CCNNGG 4 cut(s) 45, 229, 614, 1313
BseGI GGATG 6 cut(s) 137, 437, 465, 760, 1284, 1399
BseJI GATNNNNATC 1 cut(s) 1245
BseLI CCNNNNNNNGG 2 cut(s) 259, 316
BseMI GCAATG 2 cut(s) 128, 1046
BseMII CTCAG 2 cut(s) 1280, 1398
BseNI ACTGG 3 cut(s) 745, 1154, 1271
BseXI GCAGC 2 cut(s) 131, 1156
BseYI CCCAGC 1 cut(s) 568
BsgI GTGCAG 3 cut(s) 764, 1155, 1175
Bsh1236I CGCG 1 cut(s) 1296
BshFI GGCC 1 cut(s) 234
BshVI ATCGAT 1 cut(s) 1098
BsiHKAI GWGCWC 1 cut(s) 972
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 2 cut(s) 915, 1160
BslFI GGGAC 1 cut(s) 1242
BslI CCNNNNNNNGG 2 cut(s) 259, 316
BsmAI GTCTC 3 cut(s) 214, 451, 838
BsmBI CGTCTC 1 cut(s) 214
BsmFI GGGAC 1 cut(s) 1242
BsnI GGCC 1 cut(s) 234
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 2 cut(s) 972, 1160
Bsp143I GATC 4 cut(s) 327, 385, 790, 807
Bsp1720I GCTNAGC 1 cut(s) 869
Bsp19I CCATGG 2 cut(s) 45, 614
BspACI CCGC 6 cut(s) 72, 235, 631, 877, 1010, 1337
BspANI GGCC 1 cut(s) 234
BspCNI CTCAG 2 cut(s) 1281, 1399
BspDI ATCGAT 1 cut(s) 1098
BspFNI CGCG 1 cut(s) 1296
BspHI TCATGA 1 cut(s) 795
BspLI GGNNCC 2 cut(s) 220, 1022
BspPI GGATC 1 cut(s) 393
BspQI GCTCTTC 1 cut(s) 1019
BsrBI CCGCTC 2 cut(s) 631, 1012
BsrDI GCAATG 2 cut(s) 128, 1046
BsrFI RCCGGY 1 cut(s) 914
BsrI ACTGG 3 cut(s) 745, 1154, 1271
BssAI RCCGGY 1 cut(s) 914
BssECI CCNNGG 4 cut(s) 45, 229, 614, 1313
BssMI GATC 4 cut(s) 327, 385, 790, 807
BssNAI GTATAC 1 cut(s) 1378
BssSI CACGAG 1 cut(s) 995
BssT1I CCWWGG 2 cut(s) 45, 614
Bst1107I GTATAC 1 cut(s) 1378
Bst2BI CACGAG 1 cut(s) 995
Bst2UI CCWGG 1 cut(s) 167
Bst4CI ACNGT 7 cut(s) 230, 523, 652, 1176, 1196, 1204, 1375
Bst6I CTCTTC 2 cut(s) 528, 1019
BstC8I GCNNGC 6 cut(s) 135, 357, 361, 566, 875, 916
BstDEI CTNAG 3 cut(s) 869, 1289, 1407
BstDSI CCRYGG 4 cut(s) 45, 229, 614, 1313
BstF5I GGATG 6 cut(s) 137, 437, 465, 760, 1284, 1399
BstFNI CGCG 1 cut(s) 1296
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 2 cut(s) 291, 1296
BstKTI GATC 4 cut(s) 330, 388, 793, 810
BstMAI GTCTC 3 cut(s) 214, 451, 838
BstMBI GATC 4 cut(s) 327, 385, 790, 807
BstMWI GCNNNNNNNGC 3 cut(s) 240, 874, 883
BstNI CCWGG 1 cut(s) 167
BstNSI RCATGY 1 cut(s) 568
BstSCI CCNGG 2 cut(s) 165, 1158
BstUI CGCG 1 cut(s) 1296
BstV1I GCAGC 2 cut(s) 131, 1156
BstZ17I GTATAC 1 cut(s) 1378
Bsu15I ATCGAT 1 cut(s) 1098
BsuRI GGCC 1 cut(s) 234
BsuTUI ATCGAT 1 cut(s) 1098
BtgI CCRYGG 4 cut(s) 45, 229, 614, 1313
BtgZI GCGATG 4 cut(s) 85, 747, 1012, 1251
BtsCI GGATG 6 cut(s) 137, 437, 465, 760, 1284, 1399
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 3 cut(s) 244, 519, 1201
Cac8I GCNNGC 6 cut(s) 135, 357, 361, 566, 875, 916
CciI TCATGA 1 cut(s) 795
CfoI GCGC 2 cut(s) 291, 1296
Cfr10I RCCGGY 1 cut(s) 914
Cfr13I GGNCC 2 cut(s) 218, 1007
ClaI ATCGAT 1 cut(s) 1098
CsiI ACCWGGT 1 cut(s) 165
Csp6I GTAC 6 cut(s) 185, 280, 422, 557, 738, 1308
CviAII CATG 9 cut(s) 46, 119, 259, 340, 554, 565, 584, 615, 796
CviQI GTAC 6 cut(s) 185, 280, 422, 557, 738, 1308
DdeI CTNAG 3 cut(s) 869, 1289, 1407
DpnI GATC 4 cut(s) 329, 387, 792, 809
DpnII GATC 4 cut(s) 327, 385, 790, 807
DrdI GACNNNNNNGTC 2 cut(s) 904, 1205
DseDI GACNNNNNNGTC 2 cut(s) 904, 1205
EaeI YGGCCR 1 cut(s) 232
Eam1104I CTCTTC 2 cut(s) 528, 1019
EarI CTCTTC 2 cut(s) 528, 1019
Eco130I CCWWGG 2 cut(s) 45, 614
Eco24I GRGCYC 1 cut(s) 1160
Eco32I GATATC 1 cut(s) 575
Eco47I GGWCC 2 cut(s) 218, 1007
Eco57I CTGAAG 4 cut(s) 136, 563, 697, 1000
Eco88I CYCGRG 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 165
EcoRV GATATC 1 cut(s) 575
EcoT14I CCWWGG 2 cut(s) 45, 614
EcoT38I GRGCYC 1 cut(s) 1160
ErhI CCWWGG 2 cut(s) 45, 614
Esp3I CGTCTC 1 cut(s) 214
FaeI CATG 9 cut(s) 49, 122, 262, 343, 557, 568, 587, 618, 799
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 1 cut(s) 1242
FatI CATG 9 cut(s) 45, 118, 258, 339, 553, 564, 583, 614, 795
FbaI TGATCA 1 cut(s) 327
FblI GTMKAC 2 cut(s) 63, 1377
Fnu4HI GCNGC 5 cut(s) 145, 235, 878, 1170, 1338
FokI GGATG 6 cut(s) 124, 444, 452, 747, 1291, 1386
FriOI GRGCYC 1 cut(s) 1160
Fsp4HI GCNGC 5 cut(s) 145, 235, 878, 1170, 1338
FspBI CTAG 7 cut(s) 476, 506, 530, 599, 666, 689, 986
GlaI GCGC 2 cut(s) 290, 1295
GluI GCNGC 5 cut(s) 145, 235, 878, 1170, 1338
GsaI CCCAGC 1 cut(s) 572
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 1 cut(s) 234
HapII CCGG 2 cut(s) 915, 1160
HhaI GCGC 2 cut(s) 291, 1296
Hin1II CATG 9 cut(s) 49, 122, 262, 343, 557, 568, 587, 618, 799
Hin6I GCGC 2 cut(s) 289, 1294
HinP1I GCGC 2 cut(s) 289, 1294
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 8 cut(s) 50, 122, 255, 441, 744, 1215, 1230, 1246
HpaII CCGG 2 cut(s) 915, 1160
HphI GGTGA 1 cut(s) 218
Hpy166II GTNNAC 2 cut(s) 64, 1378
Hpy188I TCNGA 9 cut(s) 155, 218, 254, 440, 456, 749, 910, 940, 1214
Hpy188III TCNNGA 6 cut(s) 626, 796, 995, 1018, 1081, 1406
Hpy8I GTNNAC 2 cut(s) 64, 1378
Hpy99I CGWCG 1 cut(s) 431
HpyAV CCTTC 6 cut(s) 265, 302, 665, 1042, 1126, 1130
HpyCH4III ACNGT 7 cut(s) 230, 523, 652, 1176, 1196, 1204, 1375
HpyCH4IV ACGT 3 cut(s) 183, 894, 1067
HpyCH4V TGCA 7 cut(s) 147, 564, 760, 781, 1172, 1192, 1369
HpyF10VI GCNNNNNNNGC 3 cut(s) 240, 874, 883
HpyF3I CTNAG 3 cut(s) 869, 1289, 1407
HpySE526I ACGT 3 cut(s) 183, 894, 1067
Hsp92II CATG 9 cut(s) 49, 122, 262, 343, 557, 568, 587, 618, 799
HspAI GCGC 2 cut(s) 289, 1294
KroI GCCGGC 1 cut(s) 914
KroNI GCCGGC 1 cut(s) 916
Ksp22I TGATCA 1 cut(s) 327
Kzo9I GATC 4 cut(s) 327, 385, 790, 807
LguI GCTCTTC 1 cut(s) 1019
LmnI GCTCC 1 cut(s) 615
Lsp1109I GCAGC 2 cut(s) 131, 1156
LweI GCATC 5 cut(s) 146, 156, 422, 769, 1156
MabI ACCWGGT 1 cut(s) 165
MaeI CTAG 7 cut(s) 476, 506, 530, 599, 666, 689, 986
MaeII ACGT 3 cut(s) 183, 894, 1067
MaeIII GTNAC 3 cut(s) 368, 895, 1196
MalI GATC 4 cut(s) 329, 387, 792, 809
MbiI CCGCTC 2 cut(s) 631, 1012
MboI GATC 4 cut(s) 327, 385, 790, 807
MboII GAAGA 9 cut(s) 142, 545, 569, 667, 676, 703, 1006, 1171, 1175
MfeI CAATTG 1 cut(s) 364
MhlI GDGCHC 2 cut(s) 972, 1160
MluCI AATT 9 cut(s) 86, 248, 364, 719, 753, 826, 923, 990, 1383
MlyI GAGTC 2 cut(s) 249, 1224
MmeI TCCRAC 1 cut(s) 277
MnlI CCTC 5 cut(s) 775, 876, 1034, 1284, 1413
MroNI GCCGGC 1 cut(s) 914
MroXI GAANNNNTTC 1 cut(s) 450
MseI TTAA 1 cut(s) 921
MspA1I CMGCKG 1 cut(s) 144
MspI CCGG 2 cut(s) 915, 1160
MspR9I CCNGG 2 cut(s) 167, 1160
MunI CAATTG 1 cut(s) 364
MvaI CCWGG 1 cut(s) 167
MvnI CGCG 1 cut(s) 1296
MwoI GCNNNNNNNGC 3 cut(s) 240, 874, 883
NaeI GCCGGC 1 cut(s) 916
NciI CCSGG 1 cut(s) 1160
NcoI CCATGG 2 cut(s) 45, 614
NdeII GATC 4 cut(s) 327, 385, 790, 807
NgoMIV GCCGGC 1 cut(s) 914
NlaIII CATG 9 cut(s) 49, 122, 262, 343, 557, 568, 587, 618, 799
NlaIV GGNNCC 2 cut(s) 220, 1022
NmuCI GTSAC 2 cut(s) 895, 1196
NspI RCATGY 1 cut(s) 568
PaeI GCATGC 1 cut(s) 568
PaeR7I CTCGAG 1 cut(s) 626
PagI TCATGA 1 cut(s) 795
PciSI GCTCTTC 1 cut(s) 1019
PcsI WCGNNNNNNNCGW 1 cut(s) 1316
PdiI GCCGGC 1 cut(s) 916
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 6 cut(s) 50, 122, 441, 744, 1215, 1246
PflFI GACNNNGTC 2 cut(s) 206, 698
PkrI GCNGC 5 cut(s) 146, 236, 879, 1171, 1339
PleI GAGTC 2 cut(s) 249, 1224
PpsI GAGTC 2 cut(s) 249, 1224
Psp6I CCWGG 1 cut(s) 165
PspFI CCCAGC 1 cut(s) 568
PspGI CCWGG 1 cut(s) 165
PspN4I GGNNCC 2 cut(s) 220, 1022
PspPI GGNCC 2 cut(s) 218, 1007
PsyI GACNNNGTC 2 cut(s) 206, 698
PvuII CAGCTG 1 cut(s) 144
RsaI GTAC 6 cut(s) 186, 281, 423, 558, 739, 1309
RsaNI GTAC 6 cut(s) 185, 280, 422, 557, 738, 1308
SapI GCTCTTC 1 cut(s) 1019
SaqAI TTAA 1 cut(s) 921
SatI GCNGC 5 cut(s) 145, 235, 878, 1170, 1338
Sau3AI GATC 4 cut(s) 327, 385, 790, 807
Sau96I GGNCC 2 cut(s) 218, 1007
SchI GAGTC 2 cut(s) 249, 1224
ScrFI CCNGG 2 cut(s) 167, 1160
SduI GDGCHC 2 cut(s) 972, 1160
SexAI ACCWGGT 1 cut(s) 165
SfaNI GCATC 5 cut(s) 146, 156, 422, 769, 1156
Sfr274I CTCGAG 1 cut(s) 626
SinI GGWCC 2 cut(s) 218, 1007
SlaI CTCGAG 1 cut(s) 626
SmlI CTYRAG 1 cut(s) 626
SmoI CTYRAG 1 cut(s) 626
SphI GCATGC 1 cut(s) 568
Sse9I AATT 9 cut(s) 86, 248, 364, 719, 753, 826, 923, 990, 1383
SsiI CCGC 6 cut(s) 72, 235, 631, 877, 1010, 1337
SspMI CTAG 7 cut(s) 476, 506, 530, 599, 666, 689, 986
StyD4I CCNGG 2 cut(s) 165, 1158
StyI CCWWGG 2 cut(s) 45, 614
TaaI ACNGT 7 cut(s) 230, 523, 652, 1176, 1196, 1204, 1375
TaiI ACGT 3 cut(s) 186, 897, 1070
TaqI TCGA 8 cut(s) 426, 444, 627, 702, 1035, 1053, 1098, 1116
TasI AATT 9 cut(s) 86, 248, 364, 719, 753, 826, 923, 990, 1383
TauI GCSGC 3 cut(s) 237, 880, 1340
TfiI GAWTC 6 cut(s) 50, 122, 441, 744, 1215, 1246
Tru1I TTAA 1 cut(s) 921
Tru9I TTAA 1 cut(s) 921
TscAI CASTG 3 cut(s) 244, 526, 1201
TseFI GTSAC 2 cut(s) 895, 1196
TseI GCWGC 2 cut(s) 144, 1169
Tsp45I GTSAC 2 cut(s) 895, 1196
TspDTI ATGAA 3 cut(s) 712, 861, 1376
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 3 cut(s) 244, 526, 1201
Tth111I GACNNNGTC 2 cut(s) 206, 698
VpaK11BI GGWCC 2 cut(s) 218, 1007
XapI RAATTY 4 cut(s) 753, 826, 923, 990
XceI RCATGY 1 cut(s) 568
XhoI CTCGAG 1 cut(s) 626
XmiI GTMKAC 2 cut(s) 63, 1377
XmnI GAANNNNTTC 1 cut(s) 450
XspI CTAG 7 cut(s) 476, 506, 530, 599, 666, 689, 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.