Rroxscaffold_2G00077550

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000188
Physical Location & Seq
Reverse (-)
1078343 .. 1082647
4305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00077550.1

Sequence Viewer

Length: 1359 bp
ATGGCAAATGGGAGTGATATAGAAAAGGGTCAAGTGGATGAAAGCATTTCAGTTAATGTAGAACGTGGAGGCAGAACTATTGAACAATTGAAAAGCACCTTAAAAACAAAGCTTTGGAAGGCCGACTCACCTTTGCCCTCTACATGTTGCATCTTCAGAGTGCCCCGGGTGCTACGACGAGAAAAAGAAGTAGCATACGAACCTGATATAGTCTCAATCGGACCCTTTCACCGAGGTCCTGATGCAAAATTTAAACTGCTGGAAAATGTGAAAGAATGGTATTTAAAATGCCTTCTCTTGCGTAAGGAAACAATAACATTGGATAGCTTGATCGAAAGCATCAAGGGACTGGAAAAAGAAGCCCGAGGTTGTTACGAACCATGCTTTCAACTTGACCAAAACGACTTCATAGAGATGCTGGTACTCGATGGTTGTTTCTTGATAGAATTATTTCGGAAGGAGTCCTCTGACCAACGACAAGATGAGCACGACCCCATTTTCAACGTGTCTTGTATGCTCGAATATCTATACCATGATCTTCTGTTGCTAGAAAATCAGCTACCTTGGTCTGTGCTCAAGTTTTTCTATCAACAAATTGAGGGTGGTGACCCTGACTCCCTCAGTAAACTAGTAATCGACTTCTTCAGAGATTCAGTGGCTGATCCTAGCATTTTCAGCTACTACAATCCCAAGCCTAATATTGAGATTCTTCACATACTTGATCTTATTAGAACTTCCCTCGTTCAGGAATATCAGGAACCTGAAGGCGTTAAGGAAGATAAAGACCAAAATGCGGCATCCACATCAAACACCAACCACTTGCCACAGAGGATCCCTAGTGCTGCTACTCTTTCAGAAGCAGGCGTTGTATTTAAAAAGGGAAAACCAGGTTGCATATTGAATATAACGTTCAAAGGTGGTGTTTTCACCATTCCTCCTTTGGCTATCGATGAGAGGACAGGTCCTTTGTTCAGGAACCTCATGGCCTTCGAGCAGTGTCATCACAGTTGCAAGCATATGATAACTTCTTATGCGGTTTTGATGGATAACCTCATCGATACGAACAAGGACGTGGATCTTCTATGTGAGAAAGAGATAGTAGCCAACTGGTTGAGTGCTGATGATGCTTCGAAGTTCTTCAACGATCTATACAATGACACCACAGTCATTGGCTTTGTCTACAAGAGACTCTGCGGAAAGGTTCATGAATATCACAGAGGTACATGGAACAGGTGGAGAGAGAAATTGCTACGTGATTATTTTGACACACCATGGTCTACTATCTCATTTTTTGCAGCTTTTGTCCTCCTGGTCCTCACTTTCTTGCAGACCATATACACATTACGCCCCGCCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

452

Amino Acids

51.97

Weight (kDa)

5.37

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 51 - 439 2.2e-114 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1163
AccI GTMKAC 2 cut(s) 1179, 1277
AciI CCGC 4 cut(s) 794, 1034, 1194, 1350
AclI AACGTT 1 cut(s) 908
AclWI GGATC 4 cut(s) 656, 826, 839, 1083
AcsI RAATTY 1 cut(s) 248
AcuI CTGAAG 3 cut(s) 139, 628, 783
AfaI GTAC 2 cut(s) 423, 1222
AfiI CCNNNNNNNGG 2 cut(s) 745, 793
AflIII ACRYGT 2 cut(s) 143, 504
AgsI TTSAA 7 cut(s) 83, 91, 389, 502, 901, 913, 1141
AhlI ACTAGT 1 cut(s) 628
AjiI CACGTC 1 cut(s) 1072
AjnI CCWGG 2 cut(s) 886, 1308
AluBI AGCT 5 cut(s) 112, 327, 559, 678, 1298
AluI AGCT 5 cut(s) 112, 327, 559, 678, 1298
Alw21I GWGCWC 2 cut(s) 489, 576
Alw26I GTCTC 2 cut(s) 217, 1180
AlwI GGATC 4 cut(s) 656, 826, 839, 1083
AlwNI CAGNNNCTG 1 cut(s) 659
Ama87I CYCGRG 2 cut(s) 165, 363
AoxI GGCC 2 cut(s) 120, 984
ApeKI GCWGC 2 cut(s) 842, 1295
ApoI RAATTY 1 cut(s) 248
ArsI GACNNNNNNTTYG 2 cut(s) 949, 981
Asp700I GAANNNNTTC 2 cut(s) 450, 1136
AspS9I GGNCC 4 cut(s) 221, 236, 962, 1312
AsuC2I CCSGG 2 cut(s) 166, 167
AsuHPI GGTGA 4 cut(s) 120, 221, 617, 919
AsuII TTCGAA 1 cut(s) 1130
AvaI CYCGRG 2 cut(s) 165, 363
AvaII GGWCC 4 cut(s) 221, 236, 962, 1312
BaeGI GKGCMC 1 cut(s) 165
BamHI GGATCC 1 cut(s) 831
Bbv12I GWGCWC 2 cut(s) 489, 576
BbvI GCAGC 2 cut(s) 829, 1307
BccI CCATC 2 cut(s) 422, 1036
BciT130I CCWGG 2 cut(s) 888, 1310
BcnI CCSGG 2 cut(s) 166, 167
BcoDI GTCTC 2 cut(s) 217, 1180
BcuI ACTAGT 1 cut(s) 628
BfaI CTAG 4 cut(s) 548, 629, 666, 837
BisI GCNGC 3 cut(s) 795, 843, 1296
BlsI GCNGC 3 cut(s) 796, 844, 1297
Bme1390I CCNGG 4 cut(s) 166, 167, 888, 1310
Bme18I GGWCC 4 cut(s) 221, 236, 962, 1312
BmeT110I CYCGRG 2 cut(s) 165, 363
BmgBI CACGTC 1 cut(s) 1072
BmgT120I GGNCC 4 cut(s) 221, 236, 962, 1312
BmiI GGNNCC 4 cut(s) 223, 759, 833, 977
BmrFI CCNGG 4 cut(s) 166, 167, 888, 1310
BmsI GCATC 6 cut(s) 159, 232, 348, 405, 806, 1114
Bpu14I TTCGAA 1 cut(s) 1130
BpuEI CTTGAG 1 cut(s) 560
BpuMI CCSGG 2 cut(s) 166, 167
Bsa29I ATCGAT 2 cut(s) 948, 1056
BsaAI YACGTR 1 cut(s) 1253
BsaJI CCNNGG 6 cut(s) 164, 165, 232, 364, 563, 1271
BsaXI ACNNNNNCTCC 4 cut(s) 599, 629, 919, 949
Bsc4I CCNNNNNNNGG 2 cut(s) 745, 793
Bse1I ACTGG 2 cut(s) 354, 1112
BseBI CCWGG 2 cut(s) 888, 1310
BseCI ATCGAT 2 cut(s) 948, 1056
BseDI CCNNGG 6 cut(s) 164, 165, 232, 364, 563, 1271
BseGI GGATG 2 cut(s) 43, 797
BseLI CCNNNNNNNGG 2 cut(s) 745, 793
BseMII CTCAG 1 cut(s) 634
BseNI ACTGG 2 cut(s) 354, 1112
BseSI GKGCMC 1 cut(s) 165
BseXI GCAGC 2 cut(s) 829, 1307
BshFI GGCC 2 cut(s) 122, 986
BshVI ATCGAT 2 cut(s) 948, 1056
BsiHKAI GWGCWC 2 cut(s) 489, 576
BsiHKCI CYCGRG 2 cut(s) 165, 363
BsiSI CCGG 1 cut(s) 166
BslFI GGGAC 1 cut(s) 360
BslI CCNNNNNNNGG 2 cut(s) 745, 793
BsmAI GTCTC 2 cut(s) 217, 1180
BsmFI GGGAC 1 cut(s) 360
BsnI GGCC 2 cut(s) 122, 986
BsoBI CYCGRG 2 cut(s) 165, 363
Bsp119I TTCGAA 1 cut(s) 1130
Bsp1286I GDGCHC 3 cut(s) 165, 489, 576
Bsp143I GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
Bsp19I CCATGG 1 cut(s) 1271
BspACI CCGC 4 cut(s) 794, 1034, 1194, 1350
BspANI GGCC 2 cut(s) 122, 986
BspCNI CTCAG 1 cut(s) 633
BspDI ATCGAT 2 cut(s) 948, 1056
BspHI TCATGA 1 cut(s) 1204
BspLI GGNNCC 4 cut(s) 223, 759, 833, 977
BspPI GGATC 4 cut(s) 656, 826, 839, 1083
BspT104I TTCGAA 1 cut(s) 1130
BsrI ACTGG 2 cut(s) 354, 1112
BssECI CCNNGG 6 cut(s) 164, 165, 232, 364, 563, 1271
BssMI GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
BssT1I CCWWGG 2 cut(s) 563, 1271
Bst2UI CCWGG 2 cut(s) 888, 1310
Bst4CI ACNGT 2 cut(s) 1007, 1165
BstBAI YACGTR 1 cut(s) 1253
BstBI TTCGAA 1 cut(s) 1130
BstC8I GCNNGC 2 cut(s) 862, 1013
BstDEI CTNAG 1 cut(s) 620
BstDSI CCRYGG 1 cut(s) 1271
BstEII GGTNACC 1 cut(s) 605
BstENI CCTNNNNNAGG 1 cut(s) 743
BstF5I GGATG 2 cut(s) 43, 797
BstKTI GATC 7 cut(s) 333, 538, 664, 724, 834, 1078, 1147
BstMAI GTCTC 2 cut(s) 217, 1180
BstMBI GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
BstMWI GCNNNNNNNGC 3 cut(s) 169, 675, 1124
BstNI CCWGG 2 cut(s) 888, 1310
BstNSI RCATGY 1 cut(s) 147
BstPI GGTNACC 1 cut(s) 605
BstSCI CCNGG 4 cut(s) 164, 165, 886, 1308
BstSLI GKGCMC 1 cut(s) 165
BstV1I GCAGC 2 cut(s) 829, 1307
BstX2I RGATCY 2 cut(s) 831, 1075
BstYI RGATCY 2 cut(s) 831, 1075
Bsu15I ATCGAT 2 cut(s) 948, 1056
BsuRI GGCC 2 cut(s) 122, 986
BsuTUI ATCGAT 2 cut(s) 948, 1056
BtgI CCRYGG 1 cut(s) 1271
BtrI CACGTC 1 cut(s) 1072
BtsCI GGATG 2 cut(s) 43, 797
BtsI GCAGTG 1 cut(s) 1001
BtsIMutI CAGTG 2 cut(s) 660, 1001
Cac8I GCNNGC 2 cut(s) 862, 1013
CaiI CAGNNNCTG 1 cut(s) 659
CciI TCATGA 1 cut(s) 1204
Cfr13I GGNCC 4 cut(s) 221, 236, 962, 1312
Cfr9I CCCGGG 1 cut(s) 165
ClaI ATCGAT 2 cut(s) 948, 1056
CsiI ACCWGGT 1 cut(s) 886
Csp6I GTAC 2 cut(s) 422, 1221
CspCI CAANNNNNGTGG 2 cut(s) 1150, 1185
CviAII CATG 7 cut(s) 144, 381, 533, 982, 1205, 1224, 1272
CviQI GTAC 2 cut(s) 422, 1221
DdeI CTNAG 1 cut(s) 620
DpnI GATC 7 cut(s) 332, 537, 663, 723, 833, 1077, 1146
DpnII GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
DraI TTTAAA 3 cut(s) 253, 285, 874
DrdI GACNNNNNNGTC 1 cut(s) 1163
DseDI GACNNNNNNGTC 1 cut(s) 1163
Eco130I CCWWGG 2 cut(s) 563, 1271
Eco47I GGWCC 4 cut(s) 221, 236, 962, 1312
Eco57I CTGAAG 3 cut(s) 139, 628, 783
Eco88I CYCGRG 2 cut(s) 165, 363
Eco91I GGTNACC 1 cut(s) 605
EcoNI CCTNNNNNAGG 1 cut(s) 743
EcoO109I RGGNCCY 2 cut(s) 236, 962
EcoO65I GGTNACC 1 cut(s) 605
EcoRII CCWGG 2 cut(s) 886, 1308
EcoT14I CCWWGG 2 cut(s) 563, 1271
ErhI CCWWGG 2 cut(s) 563, 1271
FaeI CATG 7 cut(s) 147, 384, 536, 985, 1208, 1227, 1275
FaqI GGGAC 1 cut(s) 360
FatI CATG 7 cut(s) 143, 380, 532, 981, 1204, 1223, 1271
FauI CCCGC 1 cut(s) 1357
FauNDI CATATG 1 cut(s) 1017
FblI GTMKAC 2 cut(s) 1179, 1277
Fnu4HI GCNGC 3 cut(s) 795, 843, 1296
FokI GGATG 2 cut(s) 50, 784
Fsp4HI GCNGC 3 cut(s) 795, 843, 1296
FspBI CTAG 4 cut(s) 548, 629, 666, 837
GluI GCNGC 3 cut(s) 795, 843, 1296
HaeIII GGCC 2 cut(s) 122, 986
HapII CCGG 1 cut(s) 166
Hin1II CATG 7 cut(s) 147, 384, 536, 985, 1208, 1227, 1275
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 6 cut(s) 125, 461, 614, 650, 706, 1188
HpaII CCGG 1 cut(s) 166
HphI GGTGA 4 cut(s) 120, 221, 617, 919
Hpy166II GTNNAC 3 cut(s) 626, 1180, 1278
Hpy188I TCNGA 6 cut(s) 158, 221, 456, 469, 647, 856
Hpy188III TCNNGA 7 cut(s) 239, 439, 746, 755, 973, 1205, 1356
Hpy8I GTNNAC 3 cut(s) 626, 1180, 1278
Hpy99I CGWCG 1 cut(s) 180
HpyAV CCTTC 5 cut(s) 112, 302, 451, 758, 997
HpyCH4III ACNGT 2 cut(s) 1007, 1165
HpyCH4IV ACGT 5 cut(s) 64, 504, 908, 1071, 1252
HpyCH4V TGCA 6 cut(s) 150, 245, 894, 1011, 1295, 1327
HpyF10VI GCNNNNNNNGC 3 cut(s) 169, 675, 1124
HpyF3I CTNAG 1 cut(s) 620
HpySE526I ACGT 5 cut(s) 64, 504, 908, 1071, 1252
Hsp92II CATG 7 cut(s) 147, 384, 536, 985, 1208, 1227, 1275
Kzo9I GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
Lsp1109I GCAGC 2 cut(s) 829, 1307
LweI GCATC 6 cut(s) 159, 232, 348, 405, 806, 1114
MabI ACCWGGT 1 cut(s) 886
MaeI CTAG 4 cut(s) 548, 629, 666, 837
MaeII ACGT 5 cut(s) 64, 504, 908, 1071, 1252
MaeIII GTNAC 2 cut(s) 371, 605
MalI GATC 7 cut(s) 332, 537, 663, 723, 833, 1077, 1146
MboI GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
MboII GAAGA 7 cut(s) 145, 530, 634, 701, 788, 1070, 1129
MfeI CAATTG 1 cut(s) 86
MflI RGATCY 2 cut(s) 831, 1075
MhlI GDGCHC 3 cut(s) 165, 489, 576
MluCI AATT 5 cut(s) 86, 248, 446, 594, 1244
MlyI GAGTC 4 cut(s) 119, 470, 608, 1182
MroXI GAANNNNTTC 2 cut(s) 450, 1136
MseI TTAA 6 cut(s) 54, 101, 252, 284, 771, 873
MslI CAYNNNNRTG 1 cut(s) 413
MspI CCGG 1 cut(s) 166
MspR9I CCNGG 4 cut(s) 166, 167, 888, 1310
MunI CAATTG 1 cut(s) 86
MvaI CCWGG 2 cut(s) 888, 1310
MwoI GCNNNNNNNGC 3 cut(s) 169, 675, 1124
NciI CCSGG 2 cut(s) 166, 167
NcoI CCATGG 1 cut(s) 1271
NdeI CATATG 1 cut(s) 1017
NdeII GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
NlaIII CATG 7 cut(s) 147, 384, 536, 985, 1208, 1227, 1275
NlaIV GGNNCC 4 cut(s) 223, 759, 833, 977
NmuCI GTSAC 1 cut(s) 605
NspI RCATGY 1 cut(s) 147
NspV TTCGAA 1 cut(s) 1130
PagI TCATGA 1 cut(s) 1204
PciI ACATGT 1 cut(s) 143
PdmI GAANNNNTTC 2 cut(s) 450, 1136
PfeI GAWTC 2 cut(s) 650, 706
PkrI GCNGC 3 cut(s) 796, 844, 1297
PleI GAGTC 4 cut(s) 119, 469, 608, 1182
PpsI GAGTC 4 cut(s) 119, 469, 608, 1182
Ppu21I YACGTR 1 cut(s) 1253
PpuMI RGGWCCY 2 cut(s) 236, 962
PscI ACATGT 1 cut(s) 143
Psp1406I AACGTT 1 cut(s) 908
Psp5II RGGWCCY 2 cut(s) 236, 962
Psp6I CCWGG 2 cut(s) 886, 1308
PspEI GGTNACC 1 cut(s) 605
PspGI CCWGG 2 cut(s) 886, 1308
PspN4I GGNNCC 4 cut(s) 223, 759, 833, 977
PspPI GGNCC 4 cut(s) 221, 236, 962, 1312
PspPPI RGGWCCY 2 cut(s) 236, 962
PstNI CAGNNNCTG 1 cut(s) 659
PsuI RGATCY 2 cut(s) 831, 1075
RsaI GTAC 2 cut(s) 423, 1222
RsaNI GTAC 2 cut(s) 422, 1221
RseI CAYNNNNRTG 1 cut(s) 413
SaqAI TTAA 6 cut(s) 54, 101, 252, 284, 771, 873
SatI GCNGC 3 cut(s) 795, 843, 1296
Sau3AI GATC 7 cut(s) 330, 535, 661, 721, 831, 1075, 1144
Sau96I GGNCC 4 cut(s) 221, 236, 962, 1312
SchI GAGTC 4 cut(s) 119, 470, 608, 1182
ScrFI CCNGG 4 cut(s) 166, 167, 888, 1310
SduI GDGCHC 3 cut(s) 165, 489, 576
SexAI ACCWGGT 1 cut(s) 886
SfaNI GCATC 6 cut(s) 159, 232, 348, 405, 806, 1114
SfuI TTCGAA 1 cut(s) 1130
SinI GGWCC 4 cut(s) 221, 236, 962, 1312
SmaI CCCGGG 1 cut(s) 167
SmiMI CAYNNNNRTG 1 cut(s) 413
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
SpeI ACTAGT 1 cut(s) 628
Sse9I AATT 5 cut(s) 86, 248, 446, 594, 1244
SsiI CCGC 4 cut(s) 794, 1034, 1194, 1350
SspI AATATT 1 cut(s) 700
SspMI CTAG 4 cut(s) 548, 629, 666, 837
StyD4I CCNGG 4 cut(s) 164, 165, 886, 1308
StyI CCWWGG 2 cut(s) 563, 1271
TaaI ACNGT 2 cut(s) 1007, 1165
TaiI ACGT 5 cut(s) 67, 507, 911, 1074, 1255
TaqI TCGA 8 cut(s) 333, 426, 519, 636, 948, 990, 1056, 1130
TasI AATT 5 cut(s) 86, 248, 446, 594, 1244
TauI GCSGC 1 cut(s) 797
TfiI GAWTC 2 cut(s) 650, 706
Tru1I TTAA 6 cut(s) 54, 101, 252, 284, 771, 873
Tru9I TTAA 6 cut(s) 54, 101, 252, 284, 771, 873
TscAI CASTG 2 cut(s) 660, 1001
TseFI GTSAC 1 cut(s) 605
TseI GCWGC 2 cut(s) 842, 1295
Tsp45I GTSAC 1 cut(s) 605
TspDTI ATGAA 4 cut(s) 54, 397, 1193, 1221
TspMI CCCGGG 1 cut(s) 165
TspRI CASTG 2 cut(s) 660, 1001
VpaK11BI GGWCC 4 cut(s) 221, 236, 962, 1312
XagI CCTNNNNNAGG 1 cut(s) 743
XapI RAATTY 1 cut(s) 248
XceI RCATGY 1 cut(s) 147
XcmI CCANNNNNNNNNTGG 1 cut(s) 937
XmaI CCCGGG 1 cut(s) 165
XmiI GTMKAC 2 cut(s) 1179, 1277
XmnI GAANNNNTTC 2 cut(s) 450, 1136
XspI CTAG 4 cut(s) 548, 629, 666, 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.