FvH4_6g53143

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000188
Physical Location & Seq
Forward (+)
39024038 .. 39027613
3576 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g53143.t2

Sequence Viewer

Length: 1380 bp
ATGGCAAGTGGGAATGATATAGAAAAGGGTCTAGTGAATGGAAGCGATTCAATTAATGCAGAACGCGGAGGCATAAATGTTGAACAATTGAAAATCACCTTAAACACAAAGATTTTGAAGGCCGACTCACCTTTGCCTTCTACATGTTGCATCTTCAGAGTCCCCGAGGTTCTACGACGACAAAAGGTACGAGCATACGAACCTGACATAGTCTCAATCGGGCCCCTTCACCGTGGTGCTGATGCAAAATTTAAACTTGTGGAAAATGTGAAAGAATGGTATCTAAAATGCCTTCTCTGGCGTATGCCATCAATAACCTTGGATCGCTTGATCGAAAGCATGAAGGAACTTGAAATAGAAGCCCGAGGTTGCTATTCAGACCCATGCAATGATCTTGACCAAAACGACTTCATAGAGATGCTCATACTCGACGGTTGTTTCTTGATAGAATTGTTTCGGAAGGCACCTGATGAAAGTAAACAAGATGATCACGACCCCATTTTCAACGTGTCTTGTATGCTCGAGTATCTATATCATGATCTTCTGTTGATAGAAAATCAGCTTCCTTGGTTTGTGCTCGAGTGTTTCTATAACCTAATCGAGAGCGATAACCATGTACCCCTCAGTACAGTGGTGATTAACTTCTTCAGAGATTCAGTGGCTGATCCTAGCATTTTCAGCTACCGCAAATCCAAATCTACAATTGAGATTCTTCACATTGTTGATCTAATTAGAACTTCCCTCGTTCAGGAACATGTAGACGAACCTGAAGACCCAAATGCAGCTGCCCCCACACCAAAGTTGACCAACGGTACCAACCACTTGCCACAGAGGATACCTAGTGCTGCTACTCTTACAGAAGCAGGCGTTAAATTTAGAAAACCCAAAGAACCCGAGGCAGGTTCGCCAGGAGGTTGCATACTGAACATAACGTTCAAAGACGGCGTTTTCACGATTCCTCCTCTAGCTATCGATGAGAGGACAGATCCTTTGTTCAGGAACCTCATGGCCTACGAGCAGTGTTATCACAGTTGCACCCACAAGATAACATCCTACGCCGTTTTGATGGATAATCTCATCGATACGGCAAAGGACGTGGATCTTCTATGTGAGAAAGGGATAGTAGCCAACTGGTTGAGTTCTGAGGATGCTTCCAAGTTCTTCAACGATCTATACAATGATACTACAGTCATCGACTTTGTCTACAAGGGACTCTGCACGAAGGTGAATGACTATCATAATGATAGATGGAACAGGTGGATGGAGAAAGCAAGAAGTGATTATTTTGATACACCATGGTCTATTATCGCTTTTGCTACAGCTTTTGTCCTCCTCGTCCTCACCTTCTTGCAGACCGTATTCACAATCCATCAGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

460

Amino Acids

52.3

Weight (kDa)

4.97

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 51 - 447 1.3e-112 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 890
Acc65I GGTACC 1 cut(s) 812
AccB1I GGYRCC 2 cut(s) 463, 812
AccI GTMKAC 2 cut(s) 759, 1203
AccII CGCG 1 cut(s) 66
AciI CCGC 2 cut(s) 66, 685
AclI AACGTT 1 cut(s) 932
AclWI GGATC 4 cut(s) 330, 659, 980, 1107
AcsI RAATTY 2 cut(s) 248, 872
AcuI CTGAAG 3 cut(s) 139, 631, 789
AfaI GTAC 4 cut(s) 189, 618, 628, 814
AfiI CCNNNNNNNGG 2 cut(s) 748, 899
AflIII ACRYGT 3 cut(s) 143, 507, 754
AgsI TTSAA 8 cut(s) 51, 83, 91, 118, 353, 505, 937, 1165
AjiI CACGTC 1 cut(s) 1096
AjnI CCWGG 1 cut(s) 907
AleI CACNNNNGTG 2 cut(s) 234, 1223
AluBI AGCT 5 cut(s) 562, 681, 785, 968, 1322
AluI AGCT 5 cut(s) 562, 681, 785, 968, 1322
Alw21I GWGCWC 1 cut(s) 579
Alw26I GTCTC 1 cut(s) 217
AlwI GGATC 4 cut(s) 330, 659, 980, 1107
AlwNI CAGNNNCTG 1 cut(s) 662
Ama87I CYCGRG 5 cut(s) 164, 363, 521, 578, 893
AoxI GGCC 3 cut(s) 120, 221, 1008
ApaI GGGCCC 1 cut(s) 225
ApeKI GCWGC 3 cut(s) 782, 785, 845
ApoI RAATTY 2 cut(s) 248, 872
ArsI GACNNNNNNTTYG 2 cut(s) 973, 1005
AseI ATTAAT 1 cut(s) 54
Asp700I GAANNNNTTC 2 cut(s) 46, 453
Asp718I GGTACC 1 cut(s) 812
AspS9I GGNCC 2 cut(s) 221, 222
AsuHPI GGTGA 6 cut(s) 88, 120, 221, 646, 1237, 1333
AvaI CYCGRG 5 cut(s) 164, 363, 521, 578, 893
BaeGI GKGCMC 1 cut(s) 225
BaeI ACNNNNGTAYC 2 cut(s) 1173, 1206
BanI GGYRCC 2 cut(s) 463, 812
BanII GRGCYC 1 cut(s) 225
BbsI GAAGAC 1 cut(s) 777
Bbv12I GWGCWC 1 cut(s) 579
BbvI GCAGC 3 cut(s) 772, 794, 832
BccI CCATC 5 cut(s) 316, 1060, 1242, 1255, 1377
BceAI ACGGC 3 cut(s) 958, 1043, 1101
BciT130I CCWGG 1 cut(s) 909
BciVI GTATCC 1 cut(s) 828
BclI TGATCA 1 cut(s) 487
BcoDI GTCTC 1 cut(s) 217
BfaI CTAG 4 cut(s) 32, 669, 840, 965
BfmI CTRYAG 2 cut(s) 1185, 1317
BfuAI ACCTGC 1 cut(s) 890
BfuI GTATCC 1 cut(s) 828
BisI GCNGC 3 cut(s) 783, 786, 846
BlsI GCNGC 3 cut(s) 784, 787, 847
Bme1390I CCNGG 1 cut(s) 909
BmeT110I CYCGRG 5 cut(s) 164, 363, 521, 578, 893
BmgBI CACGTC 1 cut(s) 1096
BmgT120I GGNCC 2 cut(s) 221, 222
BmiI GGNNCC 5 cut(s) 223, 224, 465, 814, 1001
BmrFI CCNGG 1 cut(s) 909
BmsI GCATC 4 cut(s) 159, 232, 408, 1138
BpiI GAAGAC 1 cut(s) 777
Bsa29I ATCGAT 2 cut(s) 972, 1080
BsaJI CCNNGG 7 cut(s) 165, 232, 318, 364, 566, 894, 1295
BsaXI ACNNNNNCTCC 2 cut(s) 943, 973
Bsc4I CCNNNNNNNGG 2 cut(s) 748, 899
Bse1I ACTGG 1 cut(s) 1136
Bse3DI GCAATG 1 cut(s) 394
BseBI CCWGG 1 cut(s) 909
BseCI ATCGAT 2 cut(s) 972, 1080
BseDI CCNNGG 7 cut(s) 165, 232, 318, 364, 566, 894, 1295
BseGI GGATG 3 cut(s) 1049, 1153, 1266
BseLI CCNNNNNNNGG 2 cut(s) 748, 899
BseMI GCAATG 1 cut(s) 394
BseMII CTCAG 2 cut(s) 637, 1134
BseNI ACTGG 1 cut(s) 1136
BseRI GAGGAG 2 cut(s) 951, 1322
BseSI GKGCMC 1 cut(s) 225
BseXI GCAGC 3 cut(s) 772, 794, 832
BsgI GTGCAG 1 cut(s) 1201
Bsh1236I CGCG 1 cut(s) 66
BshFI GGCC 3 cut(s) 122, 223, 1010
BshNI GGYRCC 2 cut(s) 463, 812
BshVI ATCGAT 2 cut(s) 972, 1080
BsiHKAI GWGCWC 1 cut(s) 579
BsiHKCI CYCGRG 5 cut(s) 164, 363, 521, 578, 893
BslFI GGGAC 2 cut(s) 146, 1224
BslI CCNNNNNNNGG 2 cut(s) 748, 899
BsmAI GTCTC 1 cut(s) 217
BsmFI GGGAC 2 cut(s) 146, 1224
BsnI GGCC 3 cut(s) 122, 223, 1010
BsoBI CYCGRG 5 cut(s) 164, 363, 521, 578, 893
Bsp120I GGGCCC 1 cut(s) 221
Bsp1286I GDGCHC 2 cut(s) 225, 579
Bsp19I CCATGG 1 cut(s) 1295
BspACI CCGC 2 cut(s) 66, 685
BspANI GGCC 3 cut(s) 122, 223, 1010
BspCNI CTCAG 2 cut(s) 636, 1135
BspDI ATCGAT 2 cut(s) 972, 1080
BspFNI CGCG 1 cut(s) 66
BspHI TCATGA 1 cut(s) 535
BspLI GGNNCC 5 cut(s) 223, 224, 465, 814, 1001
BspMI ACCTGC 1 cut(s) 890
BspPI GGATC 4 cut(s) 330, 659, 980, 1107
BspT107I GGYRCC 2 cut(s) 463, 812
BsrDI GCAATG 1 cut(s) 394
BsrI ACTGG 1 cut(s) 1136
BssECI CCNNGG 7 cut(s) 165, 232, 318, 364, 566, 894, 1295
BssT1I CCWWGG 3 cut(s) 318, 566, 1295
Bst2UI CCWGG 1 cut(s) 909
Bst4CI ACNGT 7 cut(s) 233, 434, 631, 812, 1031, 1189, 1357
BstC8I GCNNGC 1 cut(s) 865
BstDEI CTNAG 2 cut(s) 623, 1143
BstDSI CCRYGG 2 cut(s) 232, 1295
BstENI CCTNNNNNAGG 1 cut(s) 746
BstF5I GGATG 3 cut(s) 1049, 1153, 1266
BstFNI CGCG 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 217
BstMWI GCNNNNNNNGC 1 cut(s) 678
BstNI CCWGG 1 cut(s) 909
BstNSI RCATGY 2 cut(s) 147, 758
BstSCI CCNGG 1 cut(s) 907
BstSFI CTRYAG 2 cut(s) 1185, 1317
BstSLI GKGCMC 1 cut(s) 225
BstUI CGCG 1 cut(s) 66
BstV1I GCAGC 3 cut(s) 772, 794, 832
BstV2I GAAGAC 1 cut(s) 777
BstX2I RGATCY 2 cut(s) 985, 1099
BstYI RGATCY 2 cut(s) 985, 1099
Bsu15I ATCGAT 2 cut(s) 972, 1080
BsuI GTATCC 1 cut(s) 828
BsuRI GGCC 3 cut(s) 122, 223, 1010
BsuTUI ATCGAT 2 cut(s) 972, 1080
BtgI CCRYGG 2 cut(s) 232, 1295
BtrI CACGTC 1 cut(s) 1096
BtsCI GGATG 3 cut(s) 1049, 1153, 1266
BtsI GCAGTG 1 cut(s) 1025
BtsIMutI CAGTG 3 cut(s) 636, 663, 1025
BveI ACCTGC 1 cut(s) 890
Cac8I GCNNGC 1 cut(s) 865
CaiI CAGNNNCTG 1 cut(s) 662
CciI TCATGA 1 cut(s) 535
Cfr13I GGNCC 2 cut(s) 221, 222
ClaI ATCGAT 2 cut(s) 972, 1080
Csp6I GTAC 4 cut(s) 188, 617, 627, 813
CspCI CAANNNNNGTGG 2 cut(s) 1077, 1112
CviAII CATG 8 cut(s) 144, 340, 384, 536, 614, 755, 1006, 1296
CviQI GTAC 4 cut(s) 188, 617, 627, 813
DdeI CTNAG 2 cut(s) 623, 1143
DraI TTTAAA 1 cut(s) 253
Eco130I CCWWGG 3 cut(s) 318, 566, 1295
Eco24I GRGCYC 1 cut(s) 225
Eco57I CTGAAG 3 cut(s) 139, 631, 789
Eco88I CYCGRG 5 cut(s) 164, 363, 521, 578, 893
EcoNI CCTNNNNNAGG 1 cut(s) 746
EcoO109I RGGNCCY 1 cut(s) 222
EcoRII CCWGG 1 cut(s) 907
EcoT14I CCWWGG 3 cut(s) 318, 566, 1295
EcoT38I GRGCYC 1 cut(s) 225
ErhI CCWWGG 3 cut(s) 318, 566, 1295
FaeI CATG 8 cut(s) 147, 343, 387, 539, 617, 758, 1009, 1299
FaqI GGGAC 2 cut(s) 146, 1224
FatI CATG 8 cut(s) 143, 339, 383, 535, 613, 754, 1005, 1295
FbaI TGATCA 1 cut(s) 487
FblI GTMKAC 2 cut(s) 759, 1203
Fnu4HI GCNGC 3 cut(s) 783, 786, 846
FokI GGATG 3 cut(s) 1036, 1160, 1273
FriOI GRGCYC 1 cut(s) 225
Fsp4HI GCNGC 3 cut(s) 783, 786, 846
FspBI CTAG 4 cut(s) 32, 669, 840, 965
GluI GCNGC 3 cut(s) 783, 786, 846
HaeIII GGCC 3 cut(s) 122, 223, 1010
Hin1II CATG 8 cut(s) 147, 343, 387, 539, 617, 758, 1009, 1299
HincII GTYRAC 1 cut(s) 804
HindII GTYRAC 1 cut(s) 804
HinfI GANTC 7 cut(s) 47, 125, 159, 653, 709, 955, 1212
HphI GGTGA 6 cut(s) 88, 120, 221, 646, 1237, 1333
Hpy166II GTNNAC 4 cut(s) 479, 760, 804, 1204
Hpy188I TCNGA 5 cut(s) 158, 379, 459, 650, 1144
Hpy188III TCNNGA 8 cut(s) 395, 442, 491, 536, 601, 749, 952, 997
Hpy8I GTNNAC 4 cut(s) 479, 760, 804, 1204
Hpy99I CGWCG 2 cut(s) 180, 434
HpyAV CCTTC 8 cut(s) 112, 147, 236, 302, 337, 454, 1216, 1354
HpyCH4III ACNGT 7 cut(s) 233, 434, 631, 812, 1031, 1189, 1357
HpyCH4IV ACGT 3 cut(s) 507, 932, 1095
HpyCH4V TGCA 9 cut(s) 59, 150, 245, 387, 782, 918, 1035, 1218, 1351
HpyF10VI GCNNNNNNNGC 1 cut(s) 678
HpyF3I CTNAG 2 cut(s) 623, 1143
HpySE526I ACGT 3 cut(s) 507, 932, 1095
Hsp92II CATG 8 cut(s) 147, 343, 387, 539, 617, 758, 1009, 1299
KpnI GGTACC 1 cut(s) 816
Ksp22I TGATCA 1 cut(s) 487
Lsp1109I GCAGC 3 cut(s) 772, 794, 832
LweI GCATC 4 cut(s) 159, 232, 408, 1138
MaeI CTAG 4 cut(s) 32, 669, 840, 965
MaeII ACGT 3 cut(s) 507, 932, 1095
MboII GAAGA 7 cut(s) 145, 533, 637, 704, 782, 1094, 1153
MfeI CAATTG 2 cut(s) 86, 702
MflI RGATCY 2 cut(s) 985, 1099
MhlI GDGCHC 2 cut(s) 225, 579
MluCI AATT 7 cut(s) 51, 86, 248, 449, 702, 729, 872
MlyI GAGTC 3 cut(s) 119, 168, 1206
MroXI GAANNNNTTC 2 cut(s) 46, 453
MseI TTAA 5 cut(s) 54, 101, 252, 639, 870
MslI CAYNNNNRTG 3 cut(s) 234, 416, 1223
MspA1I CMGCKG 1 cut(s) 785
MspR9I CCNGG 1 cut(s) 909
MunI CAATTG 2 cut(s) 86, 702
MvaI CCWGG 1 cut(s) 909
MvnI CGCG 1 cut(s) 66
MwoI GCNNNNNNNGC 1 cut(s) 678
NcoI CCATGG 1 cut(s) 1295
NlaIII CATG 8 cut(s) 147, 343, 387, 539, 617, 758, 1009, 1299
NlaIV GGNNCC 5 cut(s) 223, 224, 465, 814, 1001
NspI RCATGY 2 cut(s) 147, 758
OliI CACNNNNGTG 2 cut(s) 234, 1223
PaeR7I CTCGAG 2 cut(s) 521, 578
PagI TCATGA 1 cut(s) 535
PciI ACATGT 2 cut(s) 143, 754
PdmI GAANNNNTTC 2 cut(s) 46, 453
PfeI GAWTC 4 cut(s) 47, 653, 709, 955
PflFI GACNNNGTC 2 cut(s) 209, 1199
PkrI GCNGC 3 cut(s) 784, 787, 847
PleI GAGTC 3 cut(s) 119, 167, 1206
PpsI GAGTC 3 cut(s) 119, 167, 1206
PscI ACATGT 2 cut(s) 143, 754
PshBI ATTAAT 1 cut(s) 54
Psp1406I AACGTT 1 cut(s) 932
Psp6I CCWGG 1 cut(s) 907
PspGI CCWGG 1 cut(s) 907
PspN4I GGNNCC 5 cut(s) 223, 224, 465, 814, 1001
PspOMI GGGCCC 1 cut(s) 221
PspPI GGNCC 2 cut(s) 221, 222
PspXI VCTCGAGB 2 cut(s) 521, 578
PstNI CAGNNNCTG 1 cut(s) 662
PsuI RGATCY 2 cut(s) 985, 1099
PsyI GACNNNGTC 2 cut(s) 209, 1199
PvuII CAGCTG 1 cut(s) 785
RsaI GTAC 4 cut(s) 189, 618, 628, 814
RsaNI GTAC 4 cut(s) 188, 617, 627, 813
RseI CAYNNNNRTG 3 cut(s) 234, 416, 1223
SaqAI TTAA 5 cut(s) 54, 101, 252, 639, 870
SatI GCNGC 3 cut(s) 783, 786, 846
Sau96I GGNCC 2 cut(s) 221, 222
SchI GAGTC 3 cut(s) 119, 168, 1206
ScrFI CCNGG 1 cut(s) 909
SduI GDGCHC 2 cut(s) 225, 579
SfaNI GCATC 4 cut(s) 159, 232, 408, 1138
SfcI CTRYAG 2 cut(s) 1185, 1317
Sfr274I CTCGAG 2 cut(s) 521, 578
SlaI CTCGAG 2 cut(s) 521, 578
SmiMI CAYNNNNRTG 3 cut(s) 234, 416, 1223
SmlI CTYRAG 2 cut(s) 521, 578
SmoI CTYRAG 2 cut(s) 521, 578
Sse9I AATT 7 cut(s) 51, 86, 248, 449, 702, 729, 872
SsiI CCGC 2 cut(s) 66, 685
SspMI CTAG 4 cut(s) 32, 669, 840, 965
StyD4I CCNGG 1 cut(s) 907
StyI CCWWGG 3 cut(s) 318, 566, 1295
TaaI ACNGT 7 cut(s) 233, 434, 631, 812, 1031, 1189, 1357
TaiI ACGT 3 cut(s) 510, 935, 1098
TaqI TCGA 8 cut(s) 333, 429, 522, 579, 600, 972, 1080, 1194
TasI AATT 7 cut(s) 51, 86, 248, 449, 702, 729, 872
TatI WGTACW 1 cut(s) 626
TfiI GAWTC 4 cut(s) 47, 653, 709, 955
Tru1I TTAA 5 cut(s) 54, 101, 252, 639, 870
Tru9I TTAA 5 cut(s) 54, 101, 252, 639, 870
TscAI CASTG 3 cut(s) 636, 663, 1025
TseI GCWGC 3 cut(s) 782, 785, 845
TspDTI ATGAA 3 cut(s) 356, 400, 486
TspRI CASTG 3 cut(s) 636, 663, 1025
Tth111I GACNNNGTC 2 cut(s) 209, 1199
VspI ATTAAT 1 cut(s) 54
XagI CCTNNNNNAGG 1 cut(s) 746
XapI RAATTY 2 cut(s) 248, 872
XceI RCATGY 2 cut(s) 147, 758
XhoI CTCGAG 2 cut(s) 521, 578
XmiI GTMKAC 2 cut(s) 759, 1203
XmnI GAANNNNTTC 2 cut(s) 46, 453
XspI CTAG 4 cut(s) 32, 669, 840, 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.