Rh2AG663200

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000188
Physical Location & Seq
Forward (+)
87874496 .. 87878558
4063 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG663200.1

Sequence Viewer

Length: 1404 bp
ATGGCAAGTGGGAGTGATATAGAAAATGGTCAAGTGGATGAAAGCGTTTCAGTTCATGTAGAACGTAGAGGTATGACTGATGAACAATGGAAAAGCACCTTCAGTACAGAGCTTTTGATGGCCAAATCACCTTTGCCTTCTTCATGTTGCATCTTCAAAGTTCCTCAGGTACTACGAAGACAAAAAAAGAAGGCATACGAACCTGATATAGTCTCAATCGGGCCCTTTCACCGAGGTGGTGAAAATTTTCAACTTGTGGAAAATGTGAAAAAATGGTATTTCAAATGTCTTATATGGCGCCAGCGCTCCAACCCGACAACATTGGGATTGGATAGCTTGACTGAAAGCCTGGATAGCTTGACTGAAAGCCTGGATAACTTCACTGAAAAAATCAAGAGACTGGAACTGGATAAATGCGCCCGGGGTTGTTATTCAAACCCATGCAATCATCTTGACCAAAACCAATTCATAGAGATGCTCATACTCGATGGTTGTTTCTTGATAGAATTGTTTTGGAAGGCACCTAATGAAAAGCGACAAGATAATGAAGACCCTATTTTCAACCTGTCCTGTATGCTCGAATATCTGTACCATGATCTTCTGTTGCTAGAAAATCAGCTACCTTGGTTTGTGCTCGAGTTTTTCTATAACGAAATTGAGAGACGTAACCCTAAACCGTTACTCAGTAAAGTGGTAATAGACTTCTTCAAAGAATCAGTGCCTGATGCTACAATTTTCAGCGACCATAAACCAGAGTCTTCTGCTAAGATTCTTCACATACTTGATCTGATTAGAACTTCCCTCGTTCAAGAACAGAAAGATGTTCAGGAAAATGTAGACCCAAAGGTCGTCCACTTGCCACAGAGGATTCCTAGTGCTACTGCTCTTTTAGAGTCAGGAGTTAAATTTAAAAAGGCCAAACCAGGTTGCATTTTGAACATAACTTTCAAAGGTGGCGTTTTCACCATTCCTCCTCTGGCTATCGATGAGAGGACGGGTCCTTTGTTCAGAAACCTTATGGCCTTCGAGCAGTGTTATCACAGTTGCAAGCACAAGATAACATCCTACGCGGTTTTGATGGATAACCTCATCGATACGAACAAGGATGTGGATCTTCTATGTGAAAAACATATACTAGCCAACTGGTTGAGTGCCGATGATGCTTCGAAGTTCTTCAACGATCTATACAATGACACCACAGTCATTGACTTTGTCTACAAGGGACTCTGCGAAAAAGTGCATAAACATCACAAATCTCGATGGTACAGGTGGAAACAGAAACTGAAAAGTGTTTATTTTGACACACCATGGACTACTATCTCTTTTTTTGCAGCATTTGTCCTCCTGGTCCTCACCTTCTTGCAAACCATATACACACTCCAGACGTACTATCATCCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

467

Amino Acids

54.22

Weight (kDa)

6.41

Isoelectric Point (pI)

45.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 51 - 451 2e-112 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 845, 1199
AccB1I GGYRCC 2 cut(s) 297, 520
AccI GTMKAC 2 cut(s) 837, 1215
AccII CGCG 1 cut(s) 1070
AciI CCGC 1 cut(s) 1070
AclWI GGATC 1 cut(s) 1119
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 2 cut(s) 244, 905
AcuI CTGAAG 1 cut(s) 85
AcyI GRCGYC 1 cut(s) 298
AfaI GTAC 5 cut(s) 106, 171, 590, 1265, 1388
AfeI AGCGCT 1 cut(s) 305
AjnI CCWGG 4 cut(s) 348, 369, 922, 1344
AleI CACNNNNGTG 1 cut(s) 234
AluBI AGCT 4 cut(s) 112, 336, 357, 619
AluI AGCT 4 cut(s) 112, 336, 357, 619
Alw21I GWGCWC 1 cut(s) 636
Alw26I GTCTC 3 cut(s) 217, 391, 655
AlwI GGATC 1 cut(s) 1119
AlwNI CAGNNNCTG 2 cut(s) 722, 1282
Ama87I CYCGRG 2 cut(s) 420, 635
Aor51HI AGCGCT 1 cut(s) 305
AoxI GGCC 4 cut(s) 120, 221, 915, 1020
ApaI GGGCCC 1 cut(s) 225
ApeKI GCWGC 1 cut(s) 1331
ApoI RAATTY 2 cut(s) 244, 905
ArsI GACNNNNNNTTYG 2 cut(s) 985, 1017
Asp700I GAANNNNTTC 2 cut(s) 246, 1172
AspLEI GCGC 3 cut(s) 300, 306, 419
AspS9I GGNCC 4 cut(s) 221, 222, 998, 1348
AsuC2I CCSGG 2 cut(s) 421, 422
AsuHPI GGTGA 5 cut(s) 120, 221, 251, 955, 1345
AsuII TTCGAA 1 cut(s) 1166
AvaI CYCGRG 2 cut(s) 420, 635
AvaII GGWCC 2 cut(s) 998, 1348
AxyI CCTNAGG 1 cut(s) 165
BaeGI GKGCMC 1 cut(s) 225
BalI TGGCCA 1 cut(s) 122
BanI GGYRCC 2 cut(s) 297, 520
BanII GRGCYC 1 cut(s) 225
BbsI GAAGAC 3 cut(s) 184, 555, 750
Bbv12I GWGCWC 1 cut(s) 636
BbvI GCAGC 1 cut(s) 1343
BccI CCATC 4 cut(s) 112, 482, 1072, 1254
BciT130I CCWGG 4 cut(s) 350, 371, 924, 1346
BcnI CCSGG 2 cut(s) 421, 422
BcoDI GTCTC 3 cut(s) 217, 391, 655
BfaI CTAG 3 cut(s) 608, 873, 1136
BfoI RGCGCY 2 cut(s) 301, 307
BisI GCNGC 1 cut(s) 1332
BlsI GCNGC 1 cut(s) 1333
Bme1390I CCNGG 6 cut(s) 350, 371, 421, 422, 924, 1346
Bme18I GGWCC 2 cut(s) 998, 1348
BmeT110I CYCGRG 2 cut(s) 420, 635
BmgT120I GGNCC 4 cut(s) 221, 222, 998, 1348
BmiI GGNNCC 4 cut(s) 223, 299, 522, 999
BmrFI CCNGG 6 cut(s) 350, 371, 421, 422, 924, 1346
BmsI GCATC 4 cut(s) 159, 465, 715, 1150
BpiI GAAGAC 3 cut(s) 184, 555, 750
BpmI CTGGAG 1 cut(s) 1364
Bpu14I TTCGAA 1 cut(s) 1166
BpuMI CCSGG 2 cut(s) 421, 422
Bsa29I ATCGAT 2 cut(s) 984, 1092
BsaBI GATNNNNATC 1 cut(s) 1110
BsaHI GRCGYC 1 cut(s) 298
BsaJI CCNNGG 5 cut(s) 232, 420, 421, 623, 1307
BsaXI ACNNNNNCTCC 2 cut(s) 955, 985
Bse1I ACTGG 3 cut(s) 405, 411, 1148
Bse21I CCTNAGG 1 cut(s) 165
Bse8I GATNNNNATC 1 cut(s) 1110
BseBI CCWGG 4 cut(s) 350, 371, 924, 1346
BseCI ATCGAT 2 cut(s) 984, 1092
BseDI CCNNGG 5 cut(s) 232, 420, 421, 623, 1307
BseGI GGATG 4 cut(s) 43, 1061, 1111, 1393
BseJI GATNNNNATC 1 cut(s) 1110
BseMII CTCAG 2 cut(s) 179, 697
BseNI ACTGG 3 cut(s) 405, 411, 1148
BseRI GAGGAG 1 cut(s) 963
BseSI GKGCMC 1 cut(s) 225
BseXI GCAGC 1 cut(s) 1343
Bsh1236I CGCG 1 cut(s) 1070
BshFI GGCC 4 cut(s) 122, 223, 917, 1022
BshNI GGYRCC 2 cut(s) 297, 520
BshVI ATCGAT 2 cut(s) 984, 1092
BsiHKAI GWGCWC 1 cut(s) 636
BsiHKCI CYCGRG 2 cut(s) 420, 635
BsiSI CCGG 1 cut(s) 421
BslFI GGGAC 1 cut(s) 1236
BsmAI GTCTC 3 cut(s) 217, 391, 655
BsmBI CGTCTC 1 cut(s) 655
BsmFI GGGAC 1 cut(s) 1236
BsnI GGCC 4 cut(s) 122, 223, 917, 1022
BsoBI CYCGRG 2 cut(s) 420, 635
Bsp119I TTCGAA 1 cut(s) 1166
Bsp120I GGGCCC 1 cut(s) 221
Bsp1286I GDGCHC 2 cut(s) 225, 636
Bsp143I GATC 4 cut(s) 595, 784, 1111, 1180
Bsp19I CCATGG 1 cut(s) 1307
BspACI CCGC 1 cut(s) 1070
BspANI GGCC 4 cut(s) 122, 223, 917, 1022
BspCNI CTCAG 2 cut(s) 178, 696
BspDI ATCGAT 2 cut(s) 984, 1092
BspFNI CGCG 1 cut(s) 1070
BspLI GGNNCC 4 cut(s) 223, 299, 522, 999
BspPI GGATC 1 cut(s) 1119
BspT104I TTCGAA 1 cut(s) 1166
BspT107I GGYRCC 2 cut(s) 297, 520
BsrI ACTGG 3 cut(s) 405, 411, 1148
BssECI CCNNGG 5 cut(s) 232, 420, 421, 623, 1307
BssMI GATC 4 cut(s) 595, 784, 1111, 1180
BssNI GRCGYC 1 cut(s) 298
BssT1I CCWWGG 2 cut(s) 623, 1307
Bst2UI CCWGG 4 cut(s) 350, 371, 924, 1346
Bst4CI ACNGT 3 cut(s) 678, 1043, 1201
BstACI GRCGYC 1 cut(s) 298
BstBI TTCGAA 1 cut(s) 1166
BstC8I GCNNGC 2 cut(s) 302, 1049
BstDEI CTNAG 3 cut(s) 165, 683, 765
BstDSI CCRYGG 1 cut(s) 1307
BstF5I GGATG 4 cut(s) 43, 1061, 1111, 1393
BstFNI CGCG 1 cut(s) 1070
BstH2I RGCGCY 2 cut(s) 301, 307
BstHHI GCGC 3 cut(s) 300, 306, 419
BstKTI GATC 4 cut(s) 598, 787, 1114, 1183
BstMAI GTCTC 3 cut(s) 217, 391, 655
BstMBI GATC 4 cut(s) 595, 784, 1111, 1180
BstMWI GCNNNNNNNGC 2 cut(s) 354, 1160
BstNI CCWGG 4 cut(s) 350, 371, 924, 1346
BstSCI CCNGG 6 cut(s) 348, 369, 419, 420, 922, 1344
BstSLI GKGCMC 1 cut(s) 225
BstUI CGCG 1 cut(s) 1070
BstV1I GCAGC 1 cut(s) 1343
BstV2I GAAGAC 3 cut(s) 184, 555, 750
BstX2I RGATCY 1 cut(s) 1111
BstYI RGATCY 1 cut(s) 1111
Bsu15I ATCGAT 2 cut(s) 984, 1092
Bsu36I CCTNAGG 1 cut(s) 165
BsuRI GGCC 4 cut(s) 122, 223, 917, 1022
BsuTUI ATCGAT 2 cut(s) 984, 1092
BtgI CCRYGG 1 cut(s) 1307
BtsCI GGATG 4 cut(s) 43, 1061, 1111, 1393
BtsI GCAGTG 1 cut(s) 1037
BtsIMutI CAGTG 3 cut(s) 381, 723, 1037
Cac8I GCNNGC 2 cut(s) 302, 1049
CaiI CAGNNNCTG 2 cut(s) 722, 1282
CfoI GCGC 3 cut(s) 300, 306, 419
Cfr13I GGNCC 4 cut(s) 221, 222, 998, 1348
Cfr9I CCCGGG 1 cut(s) 420
ClaI ATCGAT 2 cut(s) 984, 1092
CsiI ACCWGGT 1 cut(s) 922
Csp6I GTAC 5 cut(s) 105, 170, 589, 1264, 1387
CspCI CAANNNNNGTGG 2 cut(s) 1186, 1221
CviAII CATG 5 cut(s) 56, 144, 441, 593, 1308
CviQI GTAC 5 cut(s) 105, 170, 589, 1264, 1387
DdeI CTNAG 3 cut(s) 165, 683, 765
DinI GGCGCC 1 cut(s) 299
DpnI GATC 4 cut(s) 597, 786, 1113, 1182
DpnII GATC 4 cut(s) 595, 784, 1111, 1180
DraI TTTAAA 1 cut(s) 910
DrdI GACNNNNNNGTC 2 cut(s) 845, 1199
DseDI GACNNNNNNGTC 2 cut(s) 845, 1199
EaeI YGGCCR 1 cut(s) 120
Eco130I CCWWGG 2 cut(s) 623, 1307
Eco24I GRGCYC 1 cut(s) 225
Eco47I GGWCC 2 cut(s) 998, 1348
Eco47III AGCGCT 1 cut(s) 305
Eco57I CTGAAG 1 cut(s) 85
Eco81I CCTNAGG 1 cut(s) 165
Eco88I CYCGRG 2 cut(s) 420, 635
EcoO109I RGGNCCY 2 cut(s) 222, 998
EcoRII CCWGG 4 cut(s) 348, 369, 922, 1344
EcoT14I CCWWGG 2 cut(s) 623, 1307
EcoT38I GRGCYC 1 cut(s) 225
EgeI GGCGCC 1 cut(s) 299
EheI GGCGCC 1 cut(s) 299
ErhI CCWWGG 2 cut(s) 623, 1307
Esp3I CGTCTC 1 cut(s) 655
FaeI CATG 5 cut(s) 59, 147, 444, 596, 1311
FaqI GGGAC 1 cut(s) 1236
FatI CATG 5 cut(s) 55, 143, 440, 592, 1307
FblI GTMKAC 2 cut(s) 837, 1215
Fnu4HI GCNGC 1 cut(s) 1332
FokI GGATG 4 cut(s) 50, 1048, 1118, 1380
FriOI GRGCYC 1 cut(s) 225
Fsp4HI GCNGC 1 cut(s) 1332
FspBI CTAG 3 cut(s) 608, 873, 1136
GlaI GCGC 3 cut(s) 299, 305, 418
GluI GCNGC 1 cut(s) 1332
GsuI CTGGAG 1 cut(s) 1364
HaeII RGCGCY 2 cut(s) 301, 307
HaeIII GGCC 4 cut(s) 122, 223, 917, 1022
HapII CCGG 1 cut(s) 421
HhaI GCGC 3 cut(s) 300, 306, 419
Hin1I GRCGYC 1 cut(s) 298
Hin1II CATG 5 cut(s) 59, 147, 444, 596, 1311
Hin6I GCGC 3 cut(s) 298, 304, 417
HinP1I GCGC 3 cut(s) 298, 304, 417
HinfI GANTC 6 cut(s) 713, 755, 769, 868, 893, 1224
HpaII CCGG 1 cut(s) 421
HphI GGTGA 5 cut(s) 120, 221, 251, 955, 1345
Hpy166II GTNNAC 3 cut(s) 838, 853, 1216
Hpy188I TCNGA 2 cut(s) 789, 1010
Hpy188III TCNNGA 8 cut(s) 394, 452, 499, 809, 827, 897, 1257, 1381
Hpy8I GTNNAC 3 cut(s) 838, 853, 1216
HpyAV CCTTC 6 cut(s) 109, 147, 184, 511, 1033, 1366
HpyCH4III ACNGT 3 cut(s) 678, 1043, 1201
HpyCH4IV ACGT 3 cut(s) 64, 664, 1385
HpyCH4V TGCA 7 cut(s) 150, 444, 930, 1047, 1240, 1331, 1363
HpyF10VI GCNNNNNNNGC 2 cut(s) 354, 1160
HpyF3I CTNAG 3 cut(s) 165, 683, 765
HpySE526I ACGT 3 cut(s) 64, 664, 1385
Hsp92I GRCGYC 1 cut(s) 298
Hsp92II CATG 5 cut(s) 59, 147, 444, 596, 1311
HspAI GCGC 3 cut(s) 298, 304, 417
KasI GGCGCC 1 cut(s) 297
Kzo9I GATC 4 cut(s) 595, 784, 1111, 1180
LmnI GCTCC 1 cut(s) 311
Lsp1109I GCAGC 1 cut(s) 1343
LweI GCATC 4 cut(s) 159, 465, 715, 1150
MabI ACCWGGT 1 cut(s) 922
MaeI CTAG 3 cut(s) 608, 873, 1136
MaeII ACGT 3 cut(s) 64, 664, 1385
MaeIII GTNAC 2 cut(s) 665, 678
MalI GATC 4 cut(s) 597, 786, 1113, 1182
MboI GATC 4 cut(s) 595, 784, 1111, 1180
MflI RGATCY 1 cut(s) 1111
MhlI GDGCHC 2 cut(s) 225, 636
MlsI TGGCCA 1 cut(s) 122
MluCI AATT 6 cut(s) 244, 464, 506, 654, 732, 905
MluNI TGGCCA 1 cut(s) 122
Mly113I GGCGCC 1 cut(s) 298
MlyI GAGTC 3 cut(s) 764, 902, 1218
MmeI TCCRAC 1 cut(s) 333
Mox20I TGGCCA 1 cut(s) 122
MroXI GAANNNNTTC 2 cut(s) 246, 1172
MscI TGGCCA 1 cut(s) 122
MseI TTAA 3 cut(s) 903, 909, 1402
MslI CAYNNNNRTG 2 cut(s) 234, 473
Msp20I TGGCCA 1 cut(s) 122
MspI CCGG 1 cut(s) 421
MspR9I CCNGG 6 cut(s) 350, 371, 421, 422, 924, 1346
MvaI CCWGG 4 cut(s) 350, 371, 924, 1346
MvnI CGCG 1 cut(s) 1070
MwoI GCNNNNNNNGC 2 cut(s) 354, 1160
NarI GGCGCC 1 cut(s) 298
NciI CCSGG 2 cut(s) 421, 422
NcoI CCATGG 1 cut(s) 1307
NdeII GATC 4 cut(s) 595, 784, 1111, 1180
NlaIII CATG 5 cut(s) 59, 147, 444, 596, 1311
NlaIV GGNNCC 4 cut(s) 223, 299, 522, 999
NspV TTCGAA 1 cut(s) 1166
OliI CACNNNNGTG 1 cut(s) 234
PaeR7I CTCGAG 1 cut(s) 635
PdmI GAANNNNTTC 2 cut(s) 246, 1172
PfeI GAWTC 3 cut(s) 713, 769, 868
PflFI GACNNNGTC 1 cut(s) 1211
PkrI GCNGC 1 cut(s) 1333
PleI GAGTC 3 cut(s) 763, 901, 1218
PluTI GGCGCC 1 cut(s) 301
PpsI GAGTC 3 cut(s) 763, 901, 1218
PpuMI RGGWCCY 1 cut(s) 998
Psp5II RGGWCCY 1 cut(s) 998
Psp6I CCWGG 4 cut(s) 348, 369, 922, 1344
PspGI CCWGG 4 cut(s) 348, 369, 922, 1344
PspN4I GGNNCC 4 cut(s) 223, 299, 522, 999
PspOMI GGGCCC 1 cut(s) 221
PspPI GGNCC 4 cut(s) 221, 222, 998, 1348
PspPPI RGGWCCY 1 cut(s) 998
PspXI VCTCGAGB 1 cut(s) 635
PstNI CAGNNNCTG 2 cut(s) 722, 1282
PsuI RGATCY 1 cut(s) 1111
PsyI GACNNNGTC 1 cut(s) 1211
RsaI GTAC 5 cut(s) 106, 171, 590, 1265, 1388
RsaNI GTAC 5 cut(s) 105, 170, 589, 1264, 1387
RseI CAYNNNNRTG 2 cut(s) 234, 473
SaqAI TTAA 3 cut(s) 903, 909, 1402
SatI GCNGC 1 cut(s) 1332
Sau3AI GATC 4 cut(s) 595, 784, 1111, 1180
Sau96I GGNCC 4 cut(s) 221, 222, 998, 1348
SchI GAGTC 3 cut(s) 764, 902, 1218
ScrFI CCNGG 6 cut(s) 350, 371, 421, 422, 924, 1346
SduI GDGCHC 2 cut(s) 225, 636
SexAI ACCWGGT 1 cut(s) 922
SfaNI GCATC 4 cut(s) 159, 465, 715, 1150
SfoI GGCGCC 1 cut(s) 299
Sfr274I CTCGAG 1 cut(s) 635
SfuI TTCGAA 1 cut(s) 1166
SinI GGWCC 2 cut(s) 998, 1348
SlaI CTCGAG 1 cut(s) 635
SmaI CCCGGG 1 cut(s) 422
SmiMI CAYNNNNRTG 2 cut(s) 234, 473
SmlI CTYRAG 1 cut(s) 635
SmoI CTYRAG 1 cut(s) 635
Sse9I AATT 6 cut(s) 244, 464, 506, 654, 732, 905
SsiI CCGC 1 cut(s) 1070
SspDI GGCGCC 1 cut(s) 297
SspMI CTAG 3 cut(s) 608, 873, 1136
StyD4I CCNGG 6 cut(s) 348, 369, 419, 420, 922, 1344
StyI CCWWGG 2 cut(s) 623, 1307
TaaI ACNGT 3 cut(s) 678, 1043, 1201
TaiI ACGT 3 cut(s) 67, 667, 1388
TaqI TCGA 8 cut(s) 486, 579, 636, 984, 1026, 1092, 1166, 1258
TasI AATT 6 cut(s) 244, 464, 506, 654, 732, 905
TatI WGTACW 1 cut(s) 104
TfiI GAWTC 3 cut(s) 713, 769, 868
Tru1I TTAA 3 cut(s) 903, 909, 1402
Tru9I TTAA 3 cut(s) 903, 909, 1402
TscAI CASTG 3 cut(s) 388, 723, 1037
TseI GCWGC 1 cut(s) 1331
TspDTI ATGAA 7 cut(s) 44, 54, 96, 132, 457, 543, 561
TspMI CCCGGG 1 cut(s) 420
TspRI CASTG 3 cut(s) 388, 723, 1037
Tth111I GACNNNGTC 1 cut(s) 1211
VpaK11BI GGWCC 2 cut(s) 998, 1348
XapI RAATTY 2 cut(s) 244, 905
XcmI CCANNNNNNNNNTGG 1 cut(s) 973
XhoI CTCGAG 1 cut(s) 635
XmaI CCCGGG 1 cut(s) 420
XmiI GTMKAC 2 cut(s) 837, 1215
XmnI GAANNNNTTC 2 cut(s) 246, 1172
XspI CTAG 3 cut(s) 608, 873, 1136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.