Prupe.1G029300_v2.0.a1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000188
Physical Location & Seq
Forward (+)
2085800 .. 2087835
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G029300.1

Sequence Viewer

Length: 1452 bp
ATGGAGAATGGTATACAGAATAGTACCAGGGACCATATTTCAGTTGTTATAGTAGACGGATATATTGGGCTCCAGGCATTGGAAAACACCATGAGAGCAAAGCTTTGCCCTGACTCATCCTCTTGGGAGGCCAAAAGCTGCATCTTCAGAGTTCCAAAGGTGCTCAAGAGACATAAACCAGAGGCATACGAACCTGATTTTGTCTCAATCGGTCCATTTCACCACGGAGCTGGTAAACAATTTCAGCACATGGAAAATGTGAAACAATGGTATTTGAATAATCTTTTGTCACGCAGGAATAATGTGAGCTTGAAAAACTTAATCGATTGCGTCGTTCCGCTGGAGAAATCGGCCCGCGAATTTTATGCTGAACCACTTGATCATCTAAGCCAAAATGACCTGGTAGAAATGATGATACTTGATGGCTGCTTTGTAATTGAACTGTTCCGGAAGTACCCTTCTGATGAGGAACATATTGACGCAAATGACCCCATCTTCAACATGGATTGCATGTTCCAATATCTCTGCCACGACCTGTTGCTGCTAGAAAATCAGCTACCTTGGTTTGTTCTCCAGCATTTATATGACCTTACCCTCGACCCCAATGAACCTGAACGCTCCCTCACTATAGTCATGCTCACAGTCTTCACCTCACAAAAACCACTGTACCATAGCTGCGACTCCTATCTAGGGTATGTTTATGAGGACAAGCATGACAAAAATTACGAAACTTTGCACATACTCGATCTGATAAGAACTTCGATAGTTTTTCCGTTCCAAGATCACATAAAAGAAAAGGAGAGAAGAGAAAAGGAGCGAAAAAAGAAAACTTTCTGCAGACCGAAAAGAAGAAGAAATAGCAATAATAATAAATTAGGGACAGATATGGACTCGGAGTTTCCTCCTGCAACTGCTCTAGCGCAGGCAGGCGTTAAATTTCGTAGCGTTTCTGCTGGCAGCATAATGAATATTGACTTTGAAAAGGGGGTCTTGCGTTATATTGGATACAAAAGGGGTACTTTTAAAATTCCACTTCTATCAATTGGGGAGTTGACAGATCCACTGTTGAGGAACCTCATTGCCTTTGAGCAATGCTACTATCACCATTCGCATGAAATAACGTCTTATGCATTCTTGATGAATAAACTCGTCGCTTCGAGCAAGGACATGGAGTTTCTTTGCGAGAAACGGATCATAGATAACTGGTTGAACGCTGAAGATGGCGCCAACTACTTTAGCAGGCTTTGCAATGACACCGTTCTGAAAAGGTTCTACTATGAGGAACTCTGCGTTGAAGTGAATATGCATTACCAGATTAAATGGTACAGGTGGCTTGAAAAGTTTAACCGCGACTATTTTGCAAACCCTTGGAGTGCGATTTCTCTCATTGCGGCTGCTATACTTCTGGCTCTCACTGTGGTGCAGACCGTGTACGCCATTCGCAGTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

484

Amino Acids

56.59

Weight (kDa)

6.51

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1223
AccB7I CCANNNNNTGG 1 cut(s) 79
AccI GTMKAC 2 cut(s) 13, 54
AccII CGCG 2 cut(s) 357, 1350
AccIII TCCGGA 1 cut(s) 447
AciI CCGC 4 cut(s) 338, 355, 1348, 1391
AclWI GGATC 2 cut(s) 1052, 1199
AcsI RAATTY 3 cut(s) 359, 935, 1026
AcuI CTGAAG 2 cut(s) 130, 1236
AcyI GRCGYC 1 cut(s) 1224
AfaI GTAC 6 cut(s) 25, 455, 668, 1018, 1325, 1433
AfiI CCNNNNNNNGG 2 cut(s) 79, 690
AgsI TTSAA 8 cut(s) 277, 313, 440, 499, 980, 1210, 1295, 1337
AjnI CCWGG 3 cut(s) 26, 72, 399
AleI CACNNNNGTG 1 cut(s) 1418
AloI GAACNNNNNNTCC 2 cut(s) 497, 529
AluBI AGCT 6 cut(s) 103, 138, 230, 309, 556, 675
AluI AGCT 6 cut(s) 103, 138, 230, 309, 556, 675
Alw21I GWGCWC 1 cut(s) 165
Alw26I GTCTC 2 cut(s) 163, 208
AlwI GGATC 2 cut(s) 1052, 1199
Aor13HI TCCGGA 1 cut(s) 447
AoxI GGCC 2 cut(s) 129, 351
ApeKI GCWGC 6 cut(s) 138, 426, 541, 675, 957, 1394
ApoI RAATTY 3 cut(s) 359, 935, 1026
Asp700I GAANNNNTTC 2 cut(s) 830, 1268
AspLEI GCGC 2 cut(s) 922, 1226
AspS9I GGNCC 3 cut(s) 31, 212, 352
AsuHPI GGTGA 3 cut(s) 212, 640, 1094
AvaII GGWCC 2 cut(s) 31, 212
BaeI ACNNNNGTAYC 2 cut(s) 650, 683
BanI GGYRCC 1 cut(s) 1223
BanII GRGCYC 1 cut(s) 72
BbsI GAAGAC 1 cut(s) 637
Bbv12I GWGCWC 1 cut(s) 165
BbvI GCAGC 6 cut(s) 125, 413, 528, 662, 969, 1381
BccI CCATC 3 cut(s) 416, 500, 1214
BcgI CGANNNNNNTGC 4 cut(s) 347, 381, 1340, 1374
BciT130I CCWGG 3 cut(s) 28, 74, 401
BciVI GTATCC 1 cut(s) 998
BclI TGATCA 1 cut(s) 379
BcoDI GTCTC 2 cut(s) 163, 208
BfaI CTAG 3 cut(s) 545, 689, 917
BfmI CTRYAG 2 cut(s) 627, 835
BfoI RGCGCY 1 cut(s) 1227
BfuI GTATCC 1 cut(s) 998
BisI GCNGC 7 cut(s) 139, 427, 542, 676, 958, 1392, 1395
BlsI GCNGC 7 cut(s) 140, 428, 543, 677, 959, 1393, 1396
Bme1390I CCNGG 3 cut(s) 28, 74, 401
Bme18I GGWCC 2 cut(s) 31, 212
BmgT120I GGNCC 3 cut(s) 31, 212, 352
BmiI GGNNCC 4 cut(s) 32, 71, 1073, 1225
BmrFI CCNGG 3 cut(s) 28, 74, 401
BmsI GCATC 1 cut(s) 150
BpiI GAAGAC 1 cut(s) 637
BpmI CTGGAG 3 cut(s) 56, 362, 557
BpuEI CTTGAG 1 cut(s) 149
Bsa29I ATCGAT 1 cut(s) 324
BsaHI GRCGYC 1 cut(s) 1224
BsaJI CCNNGG 4 cut(s) 27, 223, 560, 1367
BsaWI WCCGGW 1 cut(s) 447
Bsc4I CCNNNNNNNGG 2 cut(s) 79, 690
Bse1I ACTGG 1 cut(s) 1208
Bse3DI GCAATG 4 cut(s) 1077, 1097, 1255, 1386
BseAI TCCGGA 1 cut(s) 447
BseBI CCWGG 3 cut(s) 28, 74, 401
BseCI ATCGAT 1 cut(s) 324
BseDI CCNNGG 4 cut(s) 27, 223, 560, 1367
BseGI GGATG 1 cut(s) 116
BseLI CCNNNNNNNGG 2 cut(s) 79, 690
BseMI GCAATG 4 cut(s) 1077, 1097, 1255, 1386
BseNI ACTGG 1 cut(s) 1208
BseXI GCAGC 6 cut(s) 125, 413, 528, 662, 969, 1381
BsgI GTGCAG 1 cut(s) 1442
Bsh1236I CGCG 2 cut(s) 357, 1350
BshFI GGCC 2 cut(s) 131, 353
BshNI GGYRCC 1 cut(s) 1223
BshVI ATCGAT 1 cut(s) 324
BsiHKAI GWGCWC 1 cut(s) 165
BsiSI CCGG 1 cut(s) 448
BslFI GGGAC 2 cut(s) 44, 892
BslI CCNNNNNNNGG 2 cut(s) 79, 690
BsmAI GTCTC 2 cut(s) 163, 208
BsmFI GGGAC 2 cut(s) 44, 892
BsmI GAATGC 1 cut(s) 1130
BsnI GGCC 2 cut(s) 131, 353
Bsp1286I GDGCHC 2 cut(s) 72, 165
Bsp13I TCCGGA 1 cut(s) 447
Bsp143I GATC 5 cut(s) 379, 745, 781, 1057, 1191
BspACI CCGC 4 cut(s) 338, 355, 1348, 1391
BspANI GGCC 2 cut(s) 131, 353
BspDI ATCGAT 1 cut(s) 324
BspEI TCCGGA 1 cut(s) 447
BspFNI CGCG 2 cut(s) 357, 1350
BspLI GGNNCC 4 cut(s) 32, 71, 1073, 1225
BspMAI CTGCAG 1 cut(s) 839
BspPI GGATC 2 cut(s) 1052, 1199
BspT107I GGYRCC 1 cut(s) 1223
BsrDI GCAATG 4 cut(s) 1077, 1097, 1255, 1386
BsrI ACTGG 1 cut(s) 1208
BssECI CCNNGG 4 cut(s) 27, 223, 560, 1367
BssMI GATC 5 cut(s) 379, 745, 781, 1057, 1191
BssNAI GTATAC 1 cut(s) 14
BssNI GRCGYC 1 cut(s) 1224
BssT1I CCWWGG 2 cut(s) 560, 1367
Bst1107I GTATAC 1 cut(s) 14
Bst2UI CCWGG 3 cut(s) 28, 74, 401
Bst4CI ACNGT 7 cut(s) 444, 643, 666, 1065, 1258, 1417, 1429
Bst6I CTCTTC 1 cut(s) 799
BstACI GRCGYC 1 cut(s) 1224
BstAPI GCANNNNNTGC 1 cut(s) 1245
BstC8I GCNNGC 5 cut(s) 355, 924, 928, 955, 1241
BstDEI CTNAG 1 cut(s) 386
BstDSI CCRYGG 1 cut(s) 223
BstF5I GGATG 1 cut(s) 116
BstFNI CGCG 2 cut(s) 357, 1350
BstH2I RGCGCY 1 cut(s) 1227
BstHHI GCGC 2 cut(s) 922, 1226
BstKTI GATC 5 cut(s) 382, 748, 784, 1060, 1194
BstMAI GTCTC 2 cut(s) 163, 208
BstMBI GATC 5 cut(s) 379, 745, 781, 1057, 1191
BstMWI GCNNNNNNNGC 1 cut(s) 1245
BstNI CCWGG 3 cut(s) 28, 74, 401
BstNSI RCATGY 1 cut(s) 514
BstSCI CCNGG 3 cut(s) 26, 72, 399
BstSFI CTRYAG 2 cut(s) 627, 835
BstUI CGCG 2 cut(s) 357, 1350
BstV1I GCAGC 6 cut(s) 125, 413, 528, 662, 969, 1381
BstV2I GAAGAC 1 cut(s) 637
BstX2I RGATCY 1 cut(s) 1057
BstXI CCANNNNNNTGG 1 cut(s) 230
BstYI RGATCY 1 cut(s) 1057
BstZ17I GTATAC 1 cut(s) 14
Bsu15I ATCGAT 1 cut(s) 324
BsuI GTATCC 1 cut(s) 998
BsuRI GGCC 2 cut(s) 131, 353
BsuTUI ATCGAT 1 cut(s) 324
BtgI CCRYGG 1 cut(s) 223
BtsCI GGATG 1 cut(s) 116
BtsIMutI CAGTG 3 cut(s) 662, 1061, 1413
Cac8I GCNNGC 5 cut(s) 355, 924, 928, 955, 1241
CfoI GCGC 2 cut(s) 922, 1226
Cfr13I GGNCC 3 cut(s) 31, 212, 352
ClaI ATCGAT 1 cut(s) 324
CseI GACGC 2 cut(s) 319, 488
CsiI ACCWGGT 1 cut(s) 399
Csp6I GTAC 6 cut(s) 24, 454, 667, 1017, 1324, 1432
CviAII CATG 8 cut(s) 91, 250, 502, 511, 634, 713, 1112, 1168
CviQI GTAC 6 cut(s) 24, 454, 667, 1017, 1324, 1432
DdeI CTNAG 1 cut(s) 386
DinI GGCGCC 1 cut(s) 1225
DpnI GATC 5 cut(s) 381, 747, 783, 1059, 1193
DpnII GATC 5 cut(s) 379, 745, 781, 1057, 1191
DraI TTTAAA 1 cut(s) 1024
Eam1104I CTCTTC 1 cut(s) 799
EarI CTCTTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 560, 1367
Eco24I GRGCYC 1 cut(s) 72
Eco47I GGWCC 2 cut(s) 31, 212
Eco57I CTGAAG 2 cut(s) 130, 1236
EcoRII CCWGG 3 cut(s) 26, 72, 399
EcoT14I CCWWGG 2 cut(s) 560, 1367
EcoT22I ATGCAT 2 cut(s) 1132, 1308
EcoT38I GRGCYC 1 cut(s) 72
EgeI GGCGCC 1 cut(s) 1225
EheI GGCGCC 1 cut(s) 1225
ErhI CCWWGG 2 cut(s) 560, 1367
FaeI CATG 8 cut(s) 94, 253, 505, 514, 637, 716, 1115, 1171
FalI AAGNNNNNCTT 4 cut(s) 974, 1006, 1003, 1035
FaqI GGGAC 2 cut(s) 44, 892
FatI CATG 8 cut(s) 90, 249, 501, 510, 633, 712, 1111, 1167
FauI CCCGC 1 cut(s) 362
FbaI TGATCA 1 cut(s) 379
FblI GTMKAC 2 cut(s) 13, 54
Fnu4HI GCNGC 7 cut(s) 139, 427, 542, 676, 958, 1392, 1395
FokI GGATG 1 cut(s) 103
FriOI GRGCYC 1 cut(s) 72
Fsp4HI GCNGC 7 cut(s) 139, 427, 542, 676, 958, 1392, 1395
FspBI CTAG 3 cut(s) 545, 689, 917
GlaI GCGC 2 cut(s) 921, 1225
GluI GCNGC 7 cut(s) 139, 427, 542, 676, 958, 1392, 1395
GsuI CTGGAG 3 cut(s) 56, 362, 557
HaeII RGCGCY 1 cut(s) 1227
HaeIII GGCC 2 cut(s) 131, 353
HapII CCGG 1 cut(s) 448
HgaI GACGC 2 cut(s) 319, 488
HhaI GCGC 2 cut(s) 922, 1226
Hin1I GRCGYC 1 cut(s) 1224
Hin1II CATG 8 cut(s) 94, 253, 505, 514, 637, 716, 1115, 1171
Hin6I GCGC 2 cut(s) 920, 1224
HinP1I GCGC 2 cut(s) 920, 1224
HincII GTYRAC 1 cut(s) 1053
HindII GTYRAC 1 cut(s) 1053
HindIII AAGCTT 1 cut(s) 101
HinfI GANTC 3 cut(s) 113, 680, 890
HpaII CCGG 1 cut(s) 448
HphI GGTGA 3 cut(s) 212, 640, 1094
Hpy166II GTNNAC 5 cut(s) 14, 55, 236, 1053, 1432
Hpy188I TCNGA 5 cut(s) 149, 463, 750, 895, 1263
Hpy188III TCNNGA 3 cut(s) 166, 448, 1135
Hpy8I GTNNAC 5 cut(s) 14, 55, 236, 1053, 1432
Hpy99I CGWCG 2 cut(s) 335, 1154
HpyAV CCTTC 1 cut(s) 468
HpyCH4III ACNGT 7 cut(s) 444, 643, 666, 1065, 1258, 1417, 1429
HpyCH4IV ACGT 1 cut(s) 1121
HpyF10VI GCNNNNNNNGC 1 cut(s) 1245
HpyF3I CTNAG 1 cut(s) 386
HpySE526I ACGT 1 cut(s) 1121
Hsp92I GRCGYC 1 cut(s) 1224
Hsp92II CATG 8 cut(s) 94, 253, 505, 514, 637, 716, 1115, 1171
HspAI GCGC 2 cut(s) 920, 1224
KasI GGCGCC 1 cut(s) 1223
Kpn2I TCCGGA 1 cut(s) 447
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 5 cut(s) 379, 745, 781, 1057, 1191
LmnI GCTCC 4 cut(s) 75, 227, 623, 814
Lsp1109I GCAGC 6 cut(s) 125, 413, 528, 662, 969, 1381
LweI GCATC 1 cut(s) 150
MabI ACCWGGT 1 cut(s) 399
MaeI CTAG 3 cut(s) 545, 689, 917
MaeII ACGT 1 cut(s) 1121
MaeIII GTNAC 1 cut(s) 288
MalI GATC 5 cut(s) 381, 747, 783, 1059, 1193
MboI GATC 5 cut(s) 379, 745, 781, 1057, 1191
MboII GAAGA 7 cut(s) 136, 487, 637, 816, 861, 864, 1229
MfeI CAATTG 1 cut(s) 1041
MflI RGATCY 1 cut(s) 1057
MhlI GDGCHC 2 cut(s) 72, 165
MluCI AATT 8 cut(s) 239, 359, 435, 721, 872, 935, 1026, 1041
Mly113I GGCGCC 1 cut(s) 1224
MlyI GAGTC 3 cut(s) 107, 674, 884
Mph1103I ATGCAT 2 cut(s) 1132, 1308
MroI TCCGGA 1 cut(s) 447
MroXI GAANNNNTTC 2 cut(s) 830, 1268
MseI TTAA 5 cut(s) 320, 933, 1023, 1317, 1344
MslI CAYNNNNRTG 3 cut(s) 582, 1110, 1418
MspA1I CMGCKG 1 cut(s) 340
MspI CCGG 1 cut(s) 448
MspR9I CCNGG 3 cut(s) 28, 74, 401
MunI CAATTG 1 cut(s) 1041
Mva1269I GAATGC 1 cut(s) 1130
MvaI CCWGG 3 cut(s) 28, 74, 401
MvnI CGCG 2 cut(s) 357, 1350
MwoI GCNNNNNNNGC 1 cut(s) 1245
NarI GGCGCC 1 cut(s) 1224
NdeII GATC 5 cut(s) 379, 745, 781, 1057, 1191
NlaIII CATG 8 cut(s) 94, 253, 505, 514, 637, 716, 1115, 1171
NlaIV GGNNCC 4 cut(s) 32, 71, 1073, 1225
NmuCI GTSAC 1 cut(s) 288
NsiI ATGCAT 2 cut(s) 1132, 1308
NspI RCATGY 1 cut(s) 514
OliI CACNNNNGTG 1 cut(s) 1418
PcsI WCGNNNNNNNCGW 1 cut(s) 330
PctI GAATGC 1 cut(s) 1130
PdmI GAANNNNTTC 2 cut(s) 830, 1268
PflMI CCANNNNNTGG 1 cut(s) 79
PkrI GCNGC 7 cut(s) 140, 428, 543, 677, 959, 1393, 1396
PleI GAGTC 3 cut(s) 107, 674, 884
PluTI GGCGCC 1 cut(s) 1227
PpsI GAGTC 3 cut(s) 107, 674, 884
Psp6I CCWGG 3 cut(s) 26, 72, 399
PspGI CCWGG 3 cut(s) 26, 72, 399
PspN4I GGNNCC 4 cut(s) 32, 71, 1073, 1225
PspPI GGNCC 3 cut(s) 31, 212, 352
PstI CTGCAG 1 cut(s) 839
PsuI RGATCY 1 cut(s) 1057
RsaI GTAC 6 cut(s) 25, 455, 668, 1018, 1325, 1433
RsaNI GTAC 6 cut(s) 24, 454, 667, 1017, 1324, 1432
RseI CAYNNNNRTG 3 cut(s) 582, 1110, 1418
SaqAI TTAA 5 cut(s) 320, 933, 1023, 1317, 1344
SatI GCNGC 7 cut(s) 139, 427, 542, 676, 958, 1392, 1395
Sau3AI GATC 5 cut(s) 379, 745, 781, 1057, 1191
Sau96I GGNCC 3 cut(s) 31, 212, 352
SchI GAGTC 3 cut(s) 107, 674, 884
ScrFI CCNGG 3 cut(s) 28, 74, 401
SduI GDGCHC 2 cut(s) 72, 165
SexAI ACCWGGT 1 cut(s) 399
SfaNI GCATC 1 cut(s) 150
SfcI CTRYAG 2 cut(s) 627, 835
SfoI GGCGCC 1 cut(s) 1225
SinI GGWCC 2 cut(s) 31, 212
SmiMI CAYNNNNRTG 3 cut(s) 582, 1110, 1418
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
Sse9I AATT 8 cut(s) 239, 359, 435, 721, 872, 935, 1026, 1041
SsiI CCGC 4 cut(s) 338, 355, 1348, 1391
SspDI GGCGCC 1 cut(s) 1223
SspI AATATT 1 cut(s) 970
SspMI CTAG 3 cut(s) 545, 689, 917
StyD4I CCNGG 3 cut(s) 26, 72, 399
StyI CCWWGG 2 cut(s) 560, 1367
TaaI ACNGT 7 cut(s) 444, 643, 666, 1065, 1258, 1417, 1429
TaiI ACGT 1 cut(s) 1124
TaqI TCGA 5 cut(s) 324, 597, 744, 761, 1157
TaqII GACCGA 2 cut(s) 200, 856
TasI AATT 8 cut(s) 239, 359, 435, 721, 872, 935, 1026, 1041
TauI GCSGC 1 cut(s) 1394
Tru1I TTAA 5 cut(s) 320, 933, 1023, 1317, 1344
Tru9I TTAA 5 cut(s) 320, 933, 1023, 1317, 1344
TscAI CASTG 3 cut(s) 669, 1068, 1420
TseFI GTSAC 1 cut(s) 288
TseI GCWGC 6 cut(s) 138, 426, 541, 675, 957, 1394
Tsp45I GTSAC 1 cut(s) 288
TspDTI ATGAA 4 cut(s) 621, 980, 1128, 1154
TspGWI ACGGA 4 cut(s) 72, 240, 762, 1204
TspRI CASTG 3 cut(s) 669, 1068, 1420
Van91I CCANNNNNTGG 1 cut(s) 79
VpaK11BI GGWCC 2 cut(s) 31, 212
XapI RAATTY 3 cut(s) 359, 935, 1026
XceI RCATGY 1 cut(s) 514
XcmI CCANNNNNNNNNTGG 1 cut(s) 499
XmiI GTMKAC 2 cut(s) 13, 54
XmnI GAANNNNTTC 2 cut(s) 830, 1268
XspI CTAG 3 cut(s) 545, 689, 917
Zsp2I ATGCAT 2 cut(s) 1132, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.