pycom111g01160

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
OG0000188
Physical Location & Seq
Reverse (-)
731505 .. 732851
1347 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g01160.1

Sequence Viewer

Length: 1347 bp
ATGAAAAATGAGAGAGAAATTAGCGAAGTTGATGACACTACTGCCAAGACATCCGTTCCTATAGATGGTATTGTGGAAGAAATGACAACCAACATCGCACCAAAGCTACTCCATGTTTCGCCATTGCCAGCATCCTGCTGCATCTTCAGAGTTCCCCTCCAGATTCGGCAAAAAAACGCACAAGCATACGAACCTTACGTCATCTCAATCGGACCCTTTCACCGTGGCCGCGGTGGAGATCAATTCCGATTAATGGAAAATGTGAAGCGCTGGTACTTACAGTGCCTTCTTTCACATGCAAAAGAAACTTTGCCAGGCTTGATCAAAGGTGTCTCGGATTTGGACAAGCGCGCTCGTGATTGTTACGTAGAGCCATTGGGTCTCAACAAGGAAGACTTTGTTGAGATGATGGTACTCGACGGATGCTTCCTAATCGAACTATTTCGAAAAGGACCTTCCCACGATCTACAAGACGAGAAGGACCCCGTTTACTGTATGTCCGGCATTCGGCTATATCTTTACCATGACCTTCTCCTGCTAGAAAATCAGCTGCCATGGTTTGTTCTCGAGCGGTTATACAATTTAACTGCCGTGAAGAATACTACTAGCGAAGGAAATGCCTCCTCCCTCGCCGACCTTGTCCTCGAGTTCTTCAGAAAATACGTCGGGGACAATTGCATTTTAAACTCAAGTGTGAATCTCCGTCCTGAAATCCTGCACATACTCGGTCTCATAAGAACCGCGATCATTGCCACTTCTAAAGACGACGGCACGGGGGAAGAGATGCCGAGGGTTCCAAACGTCACAACCCTGTCCGAAGCTGGCATTAAATTCGAAGCTGGCAAATGCAAAGAAGGTCCTTCGGGTGGCATATTGAACATGAAGTTCGAAAAAGGGAAGTTCACTATGCCACAACTAGTAATCGACGAGCGGACAGGGCCGCTCCTCAGGAACCTCATCGCCTTCGAGCAATGCTACCCCAGCTGCAGCCACATGATAACGAGTTACGCCGTCCTGATGGATAATCTCATCAATTCGAGCAAGGACATCGACCTTCTTTGCGAGAGGAAAATACTGGTGAACTGGTTGAGCTCGGAAGACGCTGCAAAGTTCTTCAACGAACTGTACAACGACACAACGGTCGTGGGATCCTACTACGGGCAACTCTGCAACGATGTGAACGAGTATTATGAAAAAAACTGGAACAAGTGGATGGAAAAGCTGAAGCGCGAGCATTTTAATTCGCCGTGGGCGATTATTTCTTTGGTTGCGGCGTTTATTCTGCTGGCTCTCACAGTGTTGCAGACATATTATACAATTCATCCGTATTATTATCCTCCTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

449

Amino Acids

51.09

Weight (kDa)

5.61

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 48 - 431 1.4e-113 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1139
AccBSI CCGCTC 3 cut(s) 571, 931, 943
AccII CGCG 4 cut(s) 231, 351, 743, 1230
AciI CCGC 7 cut(s) 229, 231, 571, 741, 931, 941, 1271
AclWI GGATC 2 cut(s) 1143, 1156
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 1 cut(s) 830
AcuI CTGAAG 3 cut(s) 130, 637, 1244
AfaI GTAC 3 cut(s) 275, 414, 1127
AfeI AGCGCT 1 cut(s) 269
AfiI CCNNNNNNNGG 5 cut(s) 65, 253, 507, 866, 1158
AgsI TTSAA 2 cut(s) 877, 1117
AhlI ACTAGT 1 cut(s) 916
AjnI CCWGG 1 cut(s) 313
AluBI AGCT 7 cut(s) 106, 550, 821, 839, 984, 1092, 1222
AluI AGCT 7 cut(s) 106, 550, 821, 839, 984, 1092, 1222
Alw21I GWGCWC 1 cut(s) 1094
Alw26I GTCTC 3 cut(s) 337, 386, 734
AlwI GGATC 2 cut(s) 1143, 1156
Ama87I CYCGRG 2 cut(s) 566, 644
Aor51HI AGCGCT 1 cut(s) 269
AoxI GGCC 2 cut(s) 226, 938
ApeKI GCWGC 5 cut(s) 138, 550, 984, 987, 1103
ApoI RAATTY 1 cut(s) 830
ArsI GACNNNNNNTTYG 2 cut(s) 183, 215
AseI ATTAAT 1 cut(s) 251
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 4 cut(s) 270, 351, 353, 1230
AspS9I GGNCC 5 cut(s) 212, 452, 481, 857, 938
AsuHPI GGTGA 2 cut(s) 212, 1090
AsuII TTCGAA 3 cut(s) 445, 834, 888
AvaI CYCGRG 2 cut(s) 566, 644
AvaII GGWCC 4 cut(s) 212, 452, 481, 857
AxyI CCTNAGG 1 cut(s) 947
BamHI GGATCC 1 cut(s) 1148
BanII GRGCYC 1 cut(s) 1094
BarI GAAGNNNNNNTAC 2 cut(s) 257, 289
BauI CACGAG 1 cut(s) 354
BbsI GAAGAC 2 cut(s) 399, 1104
Bbv12I GWGCWC 1 cut(s) 1094
BbvI GCAGC 5 cut(s) 125, 537, 971, 999, 1090
BccI CCATC 4 cut(s) 59, 403, 1012, 1207
BceAI ACGGC 4 cut(s) 575, 784, 995, 1231
BcgI CGANNNNNNTGC 6 cut(s) 599, 633, 814, 848, 1030, 1064
BciT130I CCWGG 1 cut(s) 315
BclI TGATCA 1 cut(s) 321
BcoDI GTCTC 3 cut(s) 337, 386, 734
BcuI ACTAGT 1 cut(s) 916
BfaI CTAG 3 cut(s) 539, 606, 917
BfmI CTRYAG 2 cut(s) 60, 985
BfoI RGCGCY 1 cut(s) 271
BisI GCNGC 8 cut(s) 139, 229, 551, 941, 985, 988, 1104, 1272
BlsI GCNGC 8 cut(s) 140, 230, 552, 942, 986, 989, 1105, 1273
Bme1390I CCNGG 1 cut(s) 315
Bme18I GGWCC 4 cut(s) 212, 452, 481, 857
BmeT110I CYCGRG 2 cut(s) 566, 644
BmgT120I GGNCC 5 cut(s) 212, 452, 481, 857, 938
BmiI GGNNCC 5 cut(s) 214, 483, 795, 953, 1150
BmrFI CCNGG 1 cut(s) 315
BmsI GCATC 4 cut(s) 140, 150, 413, 774
BpiI GAAGAC 2 cut(s) 399, 1104
BplI GAGNNNNNCTC 2 cut(s) 141, 173
BpmI CTGGAG 1 cut(s) 143
Bpu14I TTCGAA 3 cut(s) 445, 834, 888
BpuEI CTTGAG 1 cut(s) 673
BsaAI YACGTR 1 cut(s) 367
BsaI GGTCTC 2 cut(s) 386, 734
BsaJI CCNNGG 5 cut(s) 223, 229, 554, 788, 1247
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 253, 507, 866, 1158
Bse1I ACTGG 3 cut(s) 1080, 1088, 1205
Bse21I CCTNAGG 1 cut(s) 947
Bse3DI GCAATG 3 cut(s) 122, 747, 977
BseBI CCWGG 1 cut(s) 315
BseDI CCNNGG 5 cut(s) 223, 229, 554, 788, 1247
BseGI GGATG 5 cut(s) 50, 131, 428, 1218, 1321
BseLI CCNNNNNNNGG 5 cut(s) 65, 253, 507, 866, 1158
BseMI GCAATG 3 cut(s) 122, 747, 977
BseMII CTCAG 1 cut(s) 961
BseNI ACTGG 3 cut(s) 1080, 1088, 1205
BsePI GCGCGC 1 cut(s) 349
BseRI GAGGAG 2 cut(s) 613, 935
BseXI GCAGC 5 cut(s) 125, 537, 971, 999, 1090
BseYI CCCAGC 1 cut(s) 980
BsgI GTGCAG 1 cut(s) 701
Bsh1236I CGCG 4 cut(s) 231, 351, 743, 1230
Bsh1285I CGRYCG 1 cut(s) 1143
BshFI GGCC 2 cut(s) 228, 940
BsiEI CGRYCG 1 cut(s) 1143
BsiHKAI GWGCWC 1 cut(s) 1094
BsiHKCI CYCGRG 2 cut(s) 566, 644
BsiSI CCGG 1 cut(s) 501
BslFI GGGAC 1 cut(s) 683
BslI CCNNNNNNNGG 5 cut(s) 65, 253, 507, 866, 1158
BsmAI GTCTC 3 cut(s) 337, 386, 734
BsmFI GGGAC 1 cut(s) 683
BsmI GAATGC 1 cut(s) 504
BsnI GGCC 2 cut(s) 228, 940
Bso31I GGTCTC 2 cut(s) 386, 734
BsoBI CYCGRG 2 cut(s) 566, 644
Bsp119I TTCGAA 3 cut(s) 445, 834, 888
Bsp1286I GDGCHC 1 cut(s) 1094
Bsp1407I TGTACA 1 cut(s) 1125
Bsp143I GATC 5 cut(s) 238, 321, 463, 744, 1148
Bsp19I CCATGG 1 cut(s) 554
BspACI CCGC 7 cut(s) 229, 231, 571, 741, 931, 941, 1271
BspANI GGCC 2 cut(s) 228, 940
BspCNI CTCAG 1 cut(s) 960
BspFNI CGCG 4 cut(s) 231, 351, 743, 1230
BspLI GGNNCC 5 cut(s) 214, 483, 795, 953, 1150
BspMAI CTGCAG 1 cut(s) 989
BspPI GGATC 2 cut(s) 1143, 1156
BspT104I TTCGAA 3 cut(s) 445, 834, 888
BspTNI GGTCTC 2 cut(s) 386, 734
BsrBI CCGCTC 3 cut(s) 571, 931, 943
BsrDI GCAATG 3 cut(s) 122, 747, 977
BsrGI TGTACA 1 cut(s) 1125
BsrI ACTGG 3 cut(s) 1080, 1088, 1205
BssECI CCNNGG 5 cut(s) 223, 229, 554, 788, 1247
BssHII GCGCGC 1 cut(s) 349
BssMI GATC 5 cut(s) 238, 321, 463, 744, 1148
BssSI CACGAG 1 cut(s) 354
BssT1I CCWWGG 1 cut(s) 554
Bst2BI CACGAG 1 cut(s) 354
Bst2UI CCWGG 1 cut(s) 315
Bst4CI ACNGT 6 cut(s) 224, 282, 494, 1125, 1141, 1297
Bst6I CTCTTC 1 cut(s) 774
BstAUI TGTACA 1 cut(s) 1125
BstBAI YACGTR 1 cut(s) 367
BstBI TTCGAA 3 cut(s) 445, 834, 888
BstC8I GCNNGC 6 cut(s) 129, 351, 823, 841, 1232, 1287
BstDEI CTNAG 2 cut(s) 947, 1341
BstDSI CCRYGG 4 cut(s) 223, 229, 554, 1247
BstF5I GGATG 5 cut(s) 50, 131, 428, 1218, 1321
BstFNI CGCG 4 cut(s) 231, 351, 743, 1230
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 4 cut(s) 270, 351, 353, 1230
BstKTI GATC 5 cut(s) 241, 324, 466, 747, 1151
BstMAI GTCTC 3 cut(s) 337, 386, 734
BstMBI GATC 5 cut(s) 238, 321, 463, 744, 1148
BstMCI CGRYCG 1 cut(s) 1143
BstMWI GCNNNNNNNGC 3 cut(s) 749, 937, 981
BstNI CCWGG 1 cut(s) 315
BstNSI RCATGY 1 cut(s) 299
BstSCI CCNGG 1 cut(s) 313
BstSFI CTRYAG 2 cut(s) 60, 985
BstSNI TACGTA 1 cut(s) 367
BstUI CGCG 4 cut(s) 231, 351, 743, 1230
BstV1I GCAGC 5 cut(s) 125, 537, 971, 999, 1090
BstV2I GAAGAC 2 cut(s) 399, 1104
BstX2I RGATCY 1 cut(s) 1148
BstYI RGATCY 1 cut(s) 1148
Bsu36I CCTNAGG 1 cut(s) 947
BsuRI GGCC 2 cut(s) 228, 940
BtgI CCRYGG 4 cut(s) 223, 229, 554, 1247
BtgZI GCGATG 2 cut(s) 79, 943
BtsCI GGATG 5 cut(s) 50, 131, 428, 1218, 1321
BtsIMutI CAGTG 2 cut(s) 287, 1302
Cac8I GCNNGC 6 cut(s) 129, 351, 823, 841, 1232, 1287
CfoI GCGC 4 cut(s) 270, 351, 353, 1230
Cfr13I GGNCC 5 cut(s) 212, 452, 481, 857, 938
Cfr42I CCGCGG 1 cut(s) 232
CseI GACGC 1 cut(s) 1109
Csp6I GTAC 3 cut(s) 274, 413, 1126
CspCI CAANNNNNGTGG 2 cut(s) 1125, 1160
CviAII CATG 6 cut(s) 113, 296, 524, 555, 880, 994
CviQI GTAC 3 cut(s) 274, 413, 1126
DdeI CTNAG 2 cut(s) 947, 1341
DpnI GATC 5 cut(s) 240, 323, 465, 746, 1150
DpnII GATC 5 cut(s) 238, 321, 463, 744, 1148
DraI TTTAAA 1 cut(s) 684
DrdI GACNNNNNNGTC 1 cut(s) 1139
DseDI GACNNNNNNGTC 1 cut(s) 1139
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 1 cut(s) 774
EarI CTCTTC 1 cut(s) 774
Ecl136II GAGCTC 1 cut(s) 1092
Eco105I TACGTA 1 cut(s) 367
Eco130I CCWWGG 1 cut(s) 554
Eco24I GRGCYC 1 cut(s) 1094
Eco31I GGTCTC 2 cut(s) 386, 734
Eco47I GGWCC 4 cut(s) 212, 452, 481, 857
Eco47III AGCGCT 1 cut(s) 269
Eco53kI GAGCTC 1 cut(s) 1092
Eco57I CTGAAG 3 cut(s) 130, 637, 1244
Eco81I CCTNAGG 1 cut(s) 947
Eco88I CYCGRG 2 cut(s) 566, 644
EcoICRI GAGCTC 1 cut(s) 1092
EcoO109I RGGNCCY 3 cut(s) 452, 481, 857
EcoRII CCWGG 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 554
EcoT38I GRGCYC 1 cut(s) 1094
ErhI CCWWGG 1 cut(s) 554
FaeI CATG 6 cut(s) 116, 299, 527, 558, 883, 997
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FaqI GGGAC 1 cut(s) 683
FatI CATG 6 cut(s) 112, 295, 523, 554, 879, 993
FbaI TGATCA 1 cut(s) 321
Fnu4HI GCNGC 8 cut(s) 139, 229, 551, 941, 985, 988, 1104, 1272
FokI GGATG 5 cut(s) 37, 118, 435, 1225, 1308
FriOI GRGCYC 1 cut(s) 1094
Fsp4HI GCNGC 8 cut(s) 139, 229, 551, 941, 985, 988, 1104, 1272
FspBI CTAG 3 cut(s) 539, 606, 917
GlaI GCGC 4 cut(s) 269, 350, 352, 1229
GluI GCNGC 8 cut(s) 139, 229, 551, 941, 985, 988, 1104, 1272
GsaI CCCAGC 1 cut(s) 984
GsuI CTGGAG 1 cut(s) 143
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 2 cut(s) 228, 940
HapII CCGG 1 cut(s) 501
HgaI GACGC 1 cut(s) 1109
HhaI GCGC 4 cut(s) 270, 351, 353, 1230
Hin1II CATG 6 cut(s) 116, 299, 527, 558, 883, 997
Hin6I GCGC 4 cut(s) 268, 349, 351, 1228
HinP1I GCGC 4 cut(s) 268, 349, 351, 1228
HinfI GANTC 2 cut(s) 163, 697
HpaII CCGG 1 cut(s) 501
HphI GGTGA 2 cut(s) 212, 1090
Hpy166II GTNNAC 4 cut(s) 490, 903, 1081, 1180
Hpy188I TCNGA 7 cut(s) 149, 212, 248, 337, 656, 817, 1096
Hpy188III TCNNGA 6 cut(s) 160, 356, 566, 707, 949, 1015
Hpy8I GTNNAC 4 cut(s) 490, 903, 1081, 1180
Hpy99I CGWCG 4 cut(s) 422, 668, 770, 929
HpyAV CCTTC 9 cut(s) 296, 465, 472, 539, 605, 848, 870, 973, 1064
HpyCH4III ACNGT 6 cut(s) 224, 282, 494, 1125, 1141, 1297
HpyCH4IV ACGT 4 cut(s) 198, 366, 663, 801
HpyCH4V TGCA 9 cut(s) 141, 299, 678, 718, 849, 987, 1106, 1170, 1303
HpyF10VI GCNNNNNNNGC 3 cut(s) 749, 937, 981
HpyF3I CTNAG 2 cut(s) 947, 1341
HpySE526I ACGT 4 cut(s) 198, 366, 663, 801
Hsp92II CATG 6 cut(s) 116, 299, 527, 558, 883, 997
HspAI GCGC 4 cut(s) 268, 349, 351, 1228
Ksp22I TGATCA 1 cut(s) 321
KspI CCGCGG 1 cut(s) 232
Kzo9I GATC 5 cut(s) 238, 321, 463, 744, 1148
LmnI GCTCC 1 cut(s) 948
Lsp1109I GCAGC 5 cut(s) 125, 537, 971, 999, 1090
LweI GCATC 4 cut(s) 140, 150, 413, 774
MaeI CTAG 3 cut(s) 539, 606, 917
MaeII ACGT 4 cut(s) 198, 366, 663, 801
MaeIII GTNAC 3 cut(s) 362, 802, 1004
MalI GATC 5 cut(s) 240, 323, 465, 746, 1150
MbiI CCGCTC 3 cut(s) 571, 931, 943
MboI GATC 5 cut(s) 238, 321, 463, 744, 1148
MboII GAAGA 8 cut(s) 89, 136, 404, 607, 643, 791, 1105, 1109
MfeI CAATTG 1 cut(s) 673
MflI RGATCY 1 cut(s) 1148
MhlI GDGCHC 1 cut(s) 1094
MluCI AATT 8 cut(s) 18, 242, 580, 673, 830, 1033, 1240, 1317
MroXI GAANNNNTTC 1 cut(s) 441
MseI TTAA 5 cut(s) 251, 584, 683, 828, 1239
MspA1I CMGCKG 3 cut(s) 231, 550, 984
MspI CCGG 1 cut(s) 501
MspR9I CCNGG 1 cut(s) 315
MunI CAATTG 1 cut(s) 673
Mva1269I GAATGC 1 cut(s) 504
MvaI CCWGG 1 cut(s) 315
MvnI CGCG 4 cut(s) 231, 351, 743, 1230
MwoI GCNNNNNNNGC 3 cut(s) 749, 937, 981
NcoI CCATGG 1 cut(s) 554
NdeII GATC 5 cut(s) 238, 321, 463, 744, 1148
NlaIII CATG 6 cut(s) 116, 299, 527, 558, 883, 997
NlaIV GGNNCC 5 cut(s) 214, 483, 795, 953, 1150
NmeAIII GCCGAG 1 cut(s) 813
NmuCI GTSAC 1 cut(s) 802
NspI RCATGY 1 cut(s) 299
NspV TTCGAA 3 cut(s) 445, 834, 888
PaeR7I CTCGAG 2 cut(s) 566, 644
PauI GCGCGC 1 cut(s) 349
PcsI WCGNNNNNNNCGW 3 cut(s) 195, 1179, 1250
PctI GAATGC 1 cut(s) 504
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 2 cut(s) 163, 697
PflFI GACNNNGTC 1 cut(s) 638
PkrI GCNGC 8 cut(s) 140, 230, 552, 942, 986, 989, 1105, 1273
Ppu21I YACGTR 1 cut(s) 367
PpuMI RGGWCCY 3 cut(s) 452, 481, 857
PshBI ATTAAT 1 cut(s) 251
Psp124BI GAGCTC 1 cut(s) 1094
Psp5II RGGWCCY 3 cut(s) 452, 481, 857
Psp6I CCWGG 1 cut(s) 313
PspFI CCCAGC 1 cut(s) 980
PspGI CCWGG 1 cut(s) 313
PspN4I GGNNCC 5 cut(s) 214, 483, 795, 953, 1150
PspPI GGNCC 5 cut(s) 212, 452, 481, 857, 938
PspPPI RGGWCCY 3 cut(s) 452, 481, 857
PspXI VCTCGAGB 1 cut(s) 644
PstI CTGCAG 1 cut(s) 989
PsuI RGATCY 1 cut(s) 1148
PsyI GACNNNGTC 1 cut(s) 638
PteI GCGCGC 1 cut(s) 349
PvuII CAGCTG 2 cut(s) 550, 984
RsaI GTAC 3 cut(s) 275, 414, 1127
RsaNI GTAC 3 cut(s) 274, 413, 1126
SacI GAGCTC 1 cut(s) 1094
SacII CCGCGG 1 cut(s) 232
SaqAI TTAA 5 cut(s) 251, 584, 683, 828, 1239
SatI GCNGC 8 cut(s) 139, 229, 551, 941, 985, 988, 1104, 1272
Sau3AI GATC 5 cut(s) 238, 321, 463, 744, 1148
Sau96I GGNCC 5 cut(s) 212, 452, 481, 857, 938
ScrFI CCNGG 1 cut(s) 315
SduI GDGCHC 1 cut(s) 1094
SfaNI GCATC 4 cut(s) 140, 150, 413, 774
SfcI CTRYAG 2 cut(s) 60, 985
Sfr274I CTCGAG 2 cut(s) 566, 644
Sfr303I CCGCGG 1 cut(s) 232
SfuI TTCGAA 3 cut(s) 445, 834, 888
SgrBI CCGCGG 1 cut(s) 232
SinI GGWCC 4 cut(s) 212, 452, 481, 857
SlaI CTCGAG 2 cut(s) 566, 644
SmlI CTYRAG 3 cut(s) 566, 644, 688
SmoI CTYRAG 3 cut(s) 566, 644, 688
SnaBI TACGTA 1 cut(s) 367
SpeI ACTAGT 1 cut(s) 916
Sse9I AATT 8 cut(s) 18, 242, 580, 673, 830, 1033, 1240, 1317
SsiI CCGC 7 cut(s) 229, 231, 571, 741, 931, 941, 1271
SspMI CTAG 3 cut(s) 539, 606, 917
SstI GAGCTC 1 cut(s) 1094
StyD4I CCNGG 1 cut(s) 313
StyI CCWWGG 1 cut(s) 554
TaaI ACNGT 6 cut(s) 224, 282, 494, 1125, 1141, 1297
TaiI ACGT 4 cut(s) 201, 369, 666, 804
TaqII GACCGA 1 cut(s) 716
TasI AATT 8 cut(s) 18, 242, 580, 673, 830, 1033, 1240, 1317
TatI WGTACW 1 cut(s) 1125
TauI GCSGC 3 cut(s) 231, 943, 1274
TfiI GAWTC 2 cut(s) 163, 697
Tru1I TTAA 5 cut(s) 251, 584, 683, 828, 1239
Tru9I TTAA 5 cut(s) 251, 584, 683, 828, 1239
TscAI CASTG 2 cut(s) 287, 1302
TseFI GTSAC 1 cut(s) 802
TseI GCWGC 5 cut(s) 138, 550, 984, 987, 1103
Tsp45I GTSAC 1 cut(s) 802
TspDTI ATGAA 4 cut(s) 17, 896, 1206, 1310
TspGWI ACGGA 4 cut(s) 43, 435, 692, 1314
TspRI CASTG 2 cut(s) 287, 1302
Tth111I GACNNNGTC 1 cut(s) 638
VpaK11BI GGWCC 4 cut(s) 212, 452, 481, 857
VspI ATTAAT 1 cut(s) 251
XapI RAATTY 1 cut(s) 830
XceI RCATGY 1 cut(s) 299
XhoI CTCGAG 2 cut(s) 566, 644
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 3 cut(s) 539, 606, 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.