Rroxscaffold_1G00011860

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000188
Physical Location & Seq
Forward (+)
14842260 .. 14847514
5255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00011860.1

Sequence Viewer

Length: 1341 bp
ATGGCAAGTAGAAGTGATATAGAAAAGGGTCGAGTGGATGAAAGCGTTCCAGTTAATGAAGATGATAAACAATGGAAAAACACCTTCAATATAAAGCTTTCGAAGGCCGAATCACCTTTGCCTCCTACATGTTGCATCTTCAAAGTTCCTGAGGTGTTACGACGACAAAAAGAACTAGCATACGAACCTGATATAGTCTCAATCGGACCCTTTCACCGAGGTGCTGGTGAAAAATTTAAAAAATTTAAACTTGTGGAAAATGTGAAAGAATGGTATTTAAAATGCTTTCTCTCGCGTATGGAGACAATAACCTTGGATAGCTTGATTGCAAGCATCAAGGGACTGGGACTGGAAAAACAAGCCCGAGGTTGTTATGAACCATGCTTTGATCTTGACCAAAACCACTTCATGGAGATGCTCATACTCGATGGTTGTTTCTTGATAGAATTATTTCGGAAGGCATCTTTAGAGCCACAAGATTTTGACGACCCTATTTTCCACGTGTCTTGTATGCTCGAATACCTATACCATGATCTTCTGTTGCTAGAAAATCAGCTACCTTGGTTCGTGCTGGAGTTTTTCTATAACATAACTGGGAGAGGTAGCTCTAAACCCCTCAGTAAAGTGGTAATAGACTTCTTCAAAGGTGCAATGGCTGATGATAAAATTTTCAGCGACCCCGATCCCAAGTCTTCTGGTAAGATCCTTCACATACTTGATCTGATTAGAACTTCCCTTGTTCAAAACCCAATTCCGAAAGAATCAACCAAATCAAACCACTACTTGCCGCAGAGGATACCTAGTGCTACTGCTCTTTCAGAGGCAGGAGTTAAATTTAAAGCGGGTCCCTCTGGTTGTTGCATATTGAACGTGAAGTTCGAAGGTGGCGTTTTCACCATTCCTCCTCTGGCTATCGATGAGAGGACAGGTCCTTTGTTCAGGAACCTAATGGCCTTCGAGCAGTGTTATCACAGTCGCGAGCACAAGATAACATCATACGCGGTTTTGATGGATAACCTCATCGATACGAACAAGGATGTGGATTTTCTATGTGAGAAAGAAATAGTAACCAACTGGTTGAGTGCCGATGATGCTTCGAAGTTCTTCAACGATCTATACAATGACACCACAGTCATTGACTTTTTCTACAAGAAACTCTGCGATGATGTTAATAAATATCACAAAAAGCCATGGCATAAGTATAGAGAGAAACTGAAACGTGATTATTTTGGTACACCATGGTCTACTATCTCTTTTGTTGCAGCTTCTGTCCTCCTGGTCCTCACCGTCTTGCAGACCATATACACACTCCACCCATACTATCATCCTCGGGGTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

446

Amino Acids

51.32

Weight (kDa)

6.33

Isoelectric Point (pI)

33.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 46 - 428 8.2e-113 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1130
AccB7I CCANNNNNTGG 1 cut(s) 409
AccI GTMKAC 1 cut(s) 1244
AccII CGCG 3 cut(s) 295, 978, 1001
AciI CCGC 3 cut(s) 788, 842, 1001
AclWI GGATC 2 cut(s) 677, 697
AcsI RAATTY 4 cut(s) 233, 242, 666, 833
AcvI CACGTG 1 cut(s) 502
AfaI GTAC 1 cut(s) 1234
AfiI CCNNNNNNNGG 1 cut(s) 409
AflIII ACRYGT 2 cut(s) 128, 501
AgsI TTSAA 6 cut(s) 88, 142, 643, 743, 868, 1108
AjnI CCWGG 1 cut(s) 1275
AleI CACNNNNGTG 1 cut(s) 219
AluBI AGCT 5 cut(s) 97, 321, 556, 606, 1265
AluI AGCT 5 cut(s) 97, 321, 556, 606, 1265
Alw21I GWGCWC 1 cut(s) 984
Alw26I GTCTC 2 cut(s) 202, 296
AlwI GGATC 2 cut(s) 677, 697
AlwNI CAGNNNCTG 1 cut(s) 1268
Ama87I CYCGRG 2 cut(s) 363, 1329
AoxI GGCC 2 cut(s) 105, 951
ApeKI GCWGC 1 cut(s) 1262
ApoI RAATTY 4 cut(s) 233, 242, 666, 833
ArsI GACNNNNNNTTYG 2 cut(s) 916, 948
Asp700I GAANNNNTTC 3 cut(s) 45, 450, 1103
AspS9I GGNCC 4 cut(s) 206, 845, 929, 1279
AsuHPI GGTGA 5 cut(s) 105, 206, 239, 886, 1276
AsuII TTCGAA 3 cut(s) 101, 879, 1097
AvaI CYCGRG 2 cut(s) 363, 1329
AvaII GGWCC 4 cut(s) 206, 845, 929, 1279
AxyI CCTNAGG 1 cut(s) 150
BbrPI CACGTG 1 cut(s) 502
BbsI GAAGAC 1 cut(s) 684
Bbv12I GWGCWC 1 cut(s) 984
BbvI GCAGC 1 cut(s) 1274
BccI CCATC 2 cut(s) 422, 1003
BciT130I CCWGG 1 cut(s) 1277
BciVI GTATCC 1 cut(s) 789
BcoDI GTCTC 2 cut(s) 202, 296
BfaI CTAG 3 cut(s) 176, 545, 801
BfuI GTATCC 1 cut(s) 789
BisI GCNGC 2 cut(s) 788, 1263
BlsI GCNGC 2 cut(s) 789, 1264
Bme1390I CCNGG 1 cut(s) 1277
Bme18I GGWCC 4 cut(s) 206, 845, 929, 1279
BmeT110I CYCGRG 2 cut(s) 363, 1329
BmgT120I GGNCC 4 cut(s) 206, 845, 929, 1279
BmiI GGNNCC 4 cut(s) 208, 846, 847, 944
BmrFI CCNGG 1 cut(s) 1277
BmrI ACTGGG 2 cut(s) 353, 603
BmsI GCATC 5 cut(s) 144, 342, 405, 470, 1081
BmuI ACTGGG 2 cut(s) 353, 603
BpiI GAAGAC 1 cut(s) 684
BpmI CTGGAG 1 cut(s) 593
Bpu14I TTCGAA 3 cut(s) 101, 879, 1097
Bsa29I ATCGAT 2 cut(s) 915, 1023
BsaAI YACGTR 1 cut(s) 502
BsaJI CCNNGG 7 cut(s) 217, 312, 364, 560, 1190, 1238, 1328
BsaXI ACNNNNNCTCC 2 cut(s) 886, 916
Bsc4I CCNNNNNNNGG 1 cut(s) 409
Bse1I ACTGG 5 cut(s) 50, 348, 354, 598, 1079
Bse21I CCTNAGG 1 cut(s) 150
Bse3DI GCAATG 1 cut(s) 657
BseBI CCWGG 1 cut(s) 1277
BseCI ATCGAT 2 cut(s) 915, 1023
BseDI CCNNGG 7 cut(s) 217, 312, 364, 560, 1190, 1238, 1328
BseGI GGATG 3 cut(s) 43, 1042, 1324
BseLI CCNNNNNNNGG 1 cut(s) 409
BseMI GCAATG 1 cut(s) 657
BseMII CTCAG 2 cut(s) 141, 631
BseNI ACTGG 5 cut(s) 50, 348, 354, 598, 1079
BseRI GAGGAG 1 cut(s) 894
BseXI GCAGC 1 cut(s) 1274
Bsh1236I CGCG 3 cut(s) 295, 978, 1001
BshFI GGCC 2 cut(s) 107, 953
BshVI ATCGAT 2 cut(s) 915, 1023
BsiHKAI GWGCWC 1 cut(s) 984
BsiHKCI CYCGRG 2 cut(s) 363, 1329
BslFI GGGAC 3 cut(s) 354, 360, 831
BslI CCNNNNNNNGG 1 cut(s) 409
BsmAI GTCTC 2 cut(s) 202, 296
BsmFI GGGAC 3 cut(s) 354, 360, 831
BsnI GGCC 2 cut(s) 107, 953
BsoBI CYCGRG 2 cut(s) 363, 1329
Bsp119I TTCGAA 3 cut(s) 101, 879, 1097
Bsp1286I GDGCHC 1 cut(s) 984
Bsp143I GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
Bsp19I CCATGG 2 cut(s) 1190, 1238
Bsp68I TCGCGA 1 cut(s) 978
BspACI CCGC 3 cut(s) 788, 842, 1001
BspANI GGCC 2 cut(s) 107, 953
BspCNI CTCAG 2 cut(s) 142, 630
BspDI ATCGAT 2 cut(s) 915, 1023
BspFNI CGCG 3 cut(s) 295, 978, 1001
BspLI GGNNCC 4 cut(s) 208, 846, 847, 944
BspPI GGATC 2 cut(s) 677, 697
BspT104I TTCGAA 3 cut(s) 101, 879, 1097
BsrDI GCAATG 1 cut(s) 657
BsrI ACTGG 5 cut(s) 50, 348, 354, 598, 1079
BssECI CCNNGG 7 cut(s) 217, 312, 364, 560, 1190, 1238, 1328
BssMI GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
BssT1I CCWWGG 4 cut(s) 312, 560, 1190, 1238
Bst2UI CCWGG 1 cut(s) 1277
Bst4CI ACNGT 3 cut(s) 974, 1132, 1288
BstBAI YACGTR 1 cut(s) 502
BstBI TTCGAA 3 cut(s) 101, 879, 1097
BstC8I GCNNGC 2 cut(s) 331, 980
BstDEI CTNAG 2 cut(s) 150, 617
BstDSI CCRYGG 2 cut(s) 1190, 1238
BstF5I GGATG 3 cut(s) 43, 1042, 1324
BstFNI CGCG 3 cut(s) 295, 978, 1001
BstKTI GATC 6 cut(s) 391, 535, 685, 705, 721, 1114
BstMAI GTCTC 2 cut(s) 202, 296
BstMBI GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
BstMWI GCNNNNNNNGC 1 cut(s) 1091
BstNI CCWGG 1 cut(s) 1277
BstNSI RCATGY 1 cut(s) 132
BstSCI CCNGG 1 cut(s) 1275
BstUI CGCG 3 cut(s) 295, 978, 1001
BstV1I GCAGC 1 cut(s) 1274
BstV2I GAAGAC 1 cut(s) 684
BstX2I RGATCY 1 cut(s) 702
BstYI RGATCY 1 cut(s) 702
Bsu15I ATCGAT 2 cut(s) 915, 1023
Bsu36I CCTNAGG 1 cut(s) 150
BsuI GTATCC 1 cut(s) 789
BsuRI GGCC 2 cut(s) 107, 953
BsuTUI ATCGAT 2 cut(s) 915, 1023
BtgI CCRYGG 2 cut(s) 1190, 1238
BtgZI GCGATG 1 cut(s) 1176
BtsCI GGATG 3 cut(s) 43, 1042, 1324
BtsI GCAGTG 1 cut(s) 968
BtsIMutI CAGTG 1 cut(s) 968
BtuMI TCGCGA 1 cut(s) 978
Cac8I GCNNGC 2 cut(s) 331, 980
CaiI CAGNNNCTG 1 cut(s) 1268
Cfr13I GGNCC 4 cut(s) 206, 845, 929, 1279
ClaI ATCGAT 2 cut(s) 915, 1023
Csp6I GTAC 1 cut(s) 1233
CspCI CAANNNNNGTGG 4 cut(s) 488, 523, 1117, 1152
CviAII CATG 6 cut(s) 129, 381, 409, 530, 1191, 1239
CviQI GTAC 1 cut(s) 1233
DdeI CTNAG 2 cut(s) 150, 617
DpnI GATC 6 cut(s) 390, 534, 684, 704, 720, 1113
DpnII GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
DraI TTTAAA 4 cut(s) 238, 247, 279, 838
DrdI GACNNNNNNGTC 1 cut(s) 1130
DseDI GACNNNNNNGTC 1 cut(s) 1130
Eco130I CCWWGG 4 cut(s) 312, 560, 1190, 1238
Eco47I GGWCC 4 cut(s) 206, 845, 929, 1279
Eco72I CACGTG 1 cut(s) 502
Eco81I CCTNAGG 1 cut(s) 150
Eco88I CYCGRG 2 cut(s) 363, 1329
EcoO109I RGGNCCY 2 cut(s) 845, 929
EcoRII CCWGG 1 cut(s) 1275
EcoT14I CCWWGG 4 cut(s) 312, 560, 1190, 1238
ErhI CCWWGG 4 cut(s) 312, 560, 1190, 1238
FaeI CATG 6 cut(s) 132, 384, 412, 533, 1194, 1242
FaqI GGGAC 3 cut(s) 354, 360, 831
FatI CATG 6 cut(s) 128, 380, 408, 529, 1190, 1238
FauI CCCGC 1 cut(s) 835
FblI GTMKAC 1 cut(s) 1244
Fnu4HI GCNGC 2 cut(s) 788, 1263
FokI GGATG 3 cut(s) 50, 1049, 1311
Fsp4HI GCNGC 2 cut(s) 788, 1263
FspBI CTAG 3 cut(s) 176, 545, 801
GluI GCNGC 2 cut(s) 788, 1263
GsuI CTGGAG 1 cut(s) 593
HaeIII GGCC 2 cut(s) 107, 953
Hin1II CATG 6 cut(s) 132, 384, 412, 533, 1194, 1242
HindIII AAGCTT 1 cut(s) 95
HinfI GANTC 2 cut(s) 110, 761
HphI GGTGA 5 cut(s) 105, 206, 239, 886, 1276
Hpy166II GTNNAC 2 cut(s) 1235, 1245
Hpy188I TCNGA 5 cut(s) 206, 456, 723, 756, 820
Hpy188III TCNNGA 6 cut(s) 149, 392, 439, 940, 977, 1338
Hpy8I GTNNAC 2 cut(s) 1235, 1245
Hpy99I CGWCG 1 cut(s) 165
HpyAV CCTTC 6 cut(s) 94, 97, 451, 716, 875, 964
HpyCH4III ACNGT 3 cut(s) 974, 1132, 1288
HpyCH4IV ACGT 3 cut(s) 501, 870, 1219
HpyCH4V TGCA 6 cut(s) 135, 329, 650, 861, 1262, 1294
HpyF10VI GCNNNNNNNGC 1 cut(s) 1091
HpyF3I CTNAG 2 cut(s) 150, 617
HpySE526I ACGT 3 cut(s) 501, 870, 1219
Hsp92II CATG 6 cut(s) 132, 384, 412, 533, 1194, 1242
KflI GGGWCCC 1 cut(s) 845
Kzo9I GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
Lsp1109I GCAGC 1 cut(s) 1274
LweI GCATC 5 cut(s) 144, 342, 405, 470, 1081
MaeI CTAG 3 cut(s) 176, 545, 801
MaeII ACGT 3 cut(s) 501, 870, 1219
MaeIII GTNAC 2 cut(s) 156, 1066
MalI GATC 6 cut(s) 390, 534, 684, 704, 720, 1113
MboI GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
MboII GAAGA 6 cut(s) 71, 130, 527, 631, 684, 1096
MflI RGATCY 1 cut(s) 702
MhlI GDGCHC 1 cut(s) 984
MluCI AATT 6 cut(s) 233, 242, 446, 666, 750, 833
MroXI GAANNNNTTC 3 cut(s) 45, 450, 1103
MseI TTAA 7 cut(s) 54, 237, 246, 278, 831, 837, 1170
MslI CAYNNNNRTG 2 cut(s) 219, 413
MspR9I CCNGG 1 cut(s) 1277
MvaI CCWGG 1 cut(s) 1277
MvnI CGCG 3 cut(s) 295, 978, 1001
MwoI GCNNNNNNNGC 1 cut(s) 1091
NcoI CCATGG 2 cut(s) 1190, 1238
NdeII GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
NlaIII CATG 6 cut(s) 132, 384, 412, 533, 1194, 1242
NlaIV GGNNCC 4 cut(s) 208, 846, 847, 944
NruI TCGCGA 1 cut(s) 978
NspI RCATGY 1 cut(s) 132
NspV TTCGAA 3 cut(s) 101, 879, 1097
OliI CACNNNNGTG 1 cut(s) 219
PciI ACATGT 1 cut(s) 128
PcsI WCGNNNNNNNCGW 2 cut(s) 876, 885
PdmI GAANNNNTTC 3 cut(s) 45, 450, 1103
PfeI GAWTC 2 cut(s) 110, 761
PflMI CCANNNNNTGG 1 cut(s) 409
PkrI GCNGC 2 cut(s) 789, 1264
PmaCI CACGTG 1 cut(s) 502
PmlI CACGTG 1 cut(s) 502
Ppu21I YACGTR 1 cut(s) 502
PpuMI RGGWCCY 2 cut(s) 845, 929
PscI ACATGT 1 cut(s) 128
Psp5II RGGWCCY 2 cut(s) 845, 929
Psp6I CCWGG 1 cut(s) 1275
PspCI CACGTG 1 cut(s) 502
PspGI CCWGG 1 cut(s) 1275
PspN4I GGNNCC 4 cut(s) 208, 846, 847, 944
PspPI GGNCC 4 cut(s) 206, 845, 929, 1279
PspPPI RGGWCCY 2 cut(s) 845, 929
PstNI CAGNNNCTG 1 cut(s) 1268
PsuI RGATCY 1 cut(s) 702
RruI TCGCGA 1 cut(s) 978
RsaI GTAC 1 cut(s) 1234
RsaNI GTAC 1 cut(s) 1233
RseI CAYNNNNRTG 2 cut(s) 219, 413
SaqAI TTAA 7 cut(s) 54, 237, 246, 278, 831, 837, 1170
SatI GCNGC 2 cut(s) 788, 1263
Sau3AI GATC 6 cut(s) 388, 532, 682, 702, 718, 1111
Sau96I GGNCC 4 cut(s) 206, 845, 929, 1279
ScrFI CCNGG 1 cut(s) 1277
SduI GDGCHC 1 cut(s) 984
SfaNI GCATC 5 cut(s) 144, 342, 405, 470, 1081
SfuI TTCGAA 3 cut(s) 101, 879, 1097
SinI GGWCC 4 cut(s) 206, 845, 929, 1279
SmiMI CAYNNNNRTG 2 cut(s) 219, 413
Sse9I AATT 6 cut(s) 233, 242, 446, 666, 750, 833
SsiI CCGC 3 cut(s) 788, 842, 1001
SspMI CTAG 3 cut(s) 176, 545, 801
StyD4I CCNGG 1 cut(s) 1275
StyI CCWWGG 4 cut(s) 312, 560, 1190, 1238
TaaI ACNGT 3 cut(s) 974, 1132, 1288
TaiI ACGT 3 cut(s) 504, 873, 1222
TaqI TCGA 9 cut(s) 31, 101, 426, 516, 879, 915, 957, 1023, 1097
TasI AATT 6 cut(s) 233, 242, 446, 666, 750, 833
TauI GCSGC 1 cut(s) 790
TfiI GAWTC 2 cut(s) 110, 761
Tru1I TTAA 7 cut(s) 54, 237, 246, 278, 831, 837, 1170
Tru9I TTAA 7 cut(s) 54, 237, 246, 278, 831, 837, 1170
TscAI CASTG 1 cut(s) 968
TseI GCWGC 1 cut(s) 1262
TspDTI ATGAA 4 cut(s) 54, 72, 390, 397
TspRI CASTG 1 cut(s) 968
Van91I CCANNNNNTGG 1 cut(s) 409
VpaK11BI GGWCC 4 cut(s) 206, 845, 929, 1279
XapI RAATTY 4 cut(s) 233, 242, 666, 833
XceI RCATGY 1 cut(s) 132
XcmI CCANNNNNNNNNTGG 1 cut(s) 904
XmiI GTMKAC 1 cut(s) 1244
XmnI GAANNNNTTC 3 cut(s) 45, 450, 1103
XspI CTAG 3 cut(s) 176, 545, 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.