Rw4G013670

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000188
Physical Location & Seq
Reverse (-)
31991673 .. 32010504
18832 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G013670.1

Sequence Viewer

Length: 1554 bp
ATGGCAAATGGGGAAGATCATAGTAGTGCTAATCATACTTCGATTCTTATAGAAGAGAAATCGGACATTCTTAACACATTGAAAGCCACCATGAGTGCAAAGCTTCGTCCTGATTCACCCATGTTTCCAACAAGCTGCATCTTCAGAGTTCCCCAGCTGCTTCGGAGACATAACGAGGAGGCATATCAACCTCTTATAGTGTCAATTGGACCCCTTCACCGAGGAGGCGAACAATTTCAATCCATAGAAATTGTGAAACAATGGTATTTATATAACCTTCTCTCAAGCATGAATATAAGTTTGCAAATATTCATTGACCGCATTGATAAGTTTTTAGAACAAAGAAAAGAGGGCATTATTGATCGGTTTGAGCACCACGCGCGGAGTTTTTATGCAGAACCACTTCATCATATTAACCGGAATGACTTCATAGAAATGATGATCCTTGATGGTTGCTTCTTGATACAACTATTTCGGAATTTTATTCACGGGATTGTTAGGGTTGAGAATGCCCGTGAGTTTTATTCTGAACCACTTGATCATCTTAACCAGAGCAGCTTCGTAGAAATGATGATACTAGATGGTTGCTTCCTGCTAGAACTATTTAGGAAGTTTAGGGACAAGGAGCATAGGCACATTAGTGACCCCATATTCAGCATGGATTGCATGTTTCAATATATATGTCATGACCTTTTGCTACTAGAAAATCAGATTCCTTGGTTTGTACTAAACTGTTTATATACCCTTACCTTGGACCCCAAGGATGATCCCTCCCTCAGAAAACTATTGCTCACTGTCTTCAGCTCACATCACCAACTGGCACATAATTGTCGTTCATATCTGCGCCATCTAAATAATAATGTTCATGATGAAGATGACGATGATGATAAAATCTTGCACATACTTGATTTGATAAGAACTTCGATAGTCTTCCCATTTAAAGATCAGTTTGATCTATCATTCTATGACTCGGAGACAGAATTGATGCATCCTGCGCTTGCTCTGTCAGAGGCCGGAGTTAAATTCCGAAGGGCATCCTCCACTGATACTAAAAGCATAATGAACATTGAATTCAAGGATGGGACTTTGGCAATTCCACAACTGGCAATTGGAGAGTTGACGGATTCATTGTTCAGAAACCTCATTGCCTTTGAGCAATGCTATCCTGGTCATTCGCACAAGATAACATCTTATGCCGTTTTAATGGACAACCTCATCGGTTCTAGTAAGGACATGGAGTTTCTCTGTGAGAAAAAAATAATAGATAACTGGCTCAGCGCTGAGGATGCATCAAAGTTCTTCGTCAAGCTTTACTATGACACTGTGCTCAATAAGTTCTACTATGGTGGACTCTGCTCTAAACTCAATAAACACTATGACCACAAATGGAAAACCTGGCAAGAAAAGTTCAAGCGCACCTACTGTTCTGATCCATGGAAATTTATATCTTTGACCGCAGCCTTTATCCTTCTGCTTCTCACTCTGTTGCAGACTATATATACTGTCGCGCATACTTGCAGTAGTGAAAAGCATCATCATTATTTGTGTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

517

Amino Acids

60.63

Weight (kDa)

6.04

Isoelectric Point (pI)

52.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 47 - 161 3e-26 Plant protein of unknown function
DUF247 PF03140 160 - 493 6e-90 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 380, 382, 1508
AciI CCGC 3 cut(s) 319, 382, 1455
AclWI GGATC 3 cut(s) 436, 761, 1424
AcsI RAATTY 4 cut(s) 478, 1022, 1070, 1439
AcuI CTGAAG 2 cut(s) 127, 784
AfaI GTAC 1 cut(s) 726
AfeI AGCGCT 1 cut(s) 1279
AfiI CCNNNNNNNGG 1 cut(s) 751
AgsI TTSAA 6 cut(s) 82, 239, 674, 1070, 1075, 1411
AjnI CCWGG 2 cut(s) 1165, 1394
AleI CACNNNNGTG 1 cut(s) 639
AloI GAACNNNNNNTCC 2 cut(s) 1115, 1147
AluBI AGCT 6 cut(s) 103, 135, 157, 558, 804, 1309
AluI AGCT 6 cut(s) 103, 135, 157, 558, 804, 1309
Alw21I GWGCWC 2 cut(s) 375, 1329
Alw26I GTCTC 2 cut(s) 160, 968
AlwI GGATC 3 cut(s) 436, 761, 1424
Aor51HI AGCGCT 1 cut(s) 1279
AoxI GGCC 1 cut(s) 1011
ApeKI GCWGC 4 cut(s) 135, 157, 555, 1457
ApoI RAATTY 4 cut(s) 478, 1022, 1070, 1439
Asp700I GAANNNNTTC 3 cut(s) 234, 402, 425
AspLEI GCGC 6 cut(s) 382, 846, 997, 1280, 1416, 1510
AspS9I GGNCC 2 cut(s) 209, 754
AsuHPI GGTGA 3 cut(s) 108, 209, 803
AvaII GGWCC 2 cut(s) 209, 754
BbsI GAAGAC 2 cut(s) 790, 922
Bbv12I GWGCWC 2 cut(s) 375, 1329
BbvCI CCTCAGC 1 cut(s) 1281
BbvI GCAGC 4 cut(s) 122, 144, 567, 1469
BccI CCATC 4 cut(s) 443, 575, 855, 1073
BceAI ACGGC 1 cut(s) 1181
BciT130I CCWGG 2 cut(s) 1167, 1396
BclI TGATCA 1 cut(s) 538
BcoDI GTCTC 2 cut(s) 160, 968
BfaI CTAG 4 cut(s) 578, 596, 701, 1224
BfoI RGCGCY 1 cut(s) 1281
BisI GCNGC 4 cut(s) 136, 158, 556, 1458
BlpI GCTNAGC 1 cut(s) 1274
BlsI GCNGC 4 cut(s) 137, 159, 557, 1459
Bme1390I CCNGG 2 cut(s) 1167, 1396
Bme18I GGWCC 2 cut(s) 209, 754
BmgT120I GGNCC 2 cut(s) 209, 754
BmiI GGNNCC 2 cut(s) 211, 756
BmrFI CCNGG 2 cut(s) 1167, 1396
BmsI GCATC 7 cut(s) 147, 975, 997, 1043, 1276, 1298, 1540
BpiI GAAGAC 2 cut(s) 790, 922
Bpu10I CCTNAGC 1 cut(s) 1281
Bpu1102I GCTNAGC 1 cut(s) 1274
BpuEI CTTGAG 1 cut(s) 268
BsaJI CCNNGG 5 cut(s) 220, 716, 750, 759, 1433
BsaWI WCCGGW 1 cut(s) 417
Bsc4I CCNNNNNNNGG 1 cut(s) 751
Bse1I ACTGG 3 cut(s) 822, 1107, 1274
Bse3DI GCAATG 2 cut(s) 1143, 1163
BseBI CCWGG 2 cut(s) 1167, 1396
BseDI CCNNGG 5 cut(s) 220, 716, 750, 759, 1433
BseGI GGATG 5 cut(s) 769, 988, 1034, 1084, 1291
BseLI CCNNNNNNNGG 1 cut(s) 751
BseMI GCAATG 2 cut(s) 1143, 1163
BseMII CTCAG 3 cut(s) 790, 1272, 1288
BseNI ACTGG 3 cut(s) 822, 1107, 1274
BseRI GAGGAG 2 cut(s) 191, 237
BseXI GCAGC 4 cut(s) 122, 144, 567, 1469
BseYI CCCAGC 1 cut(s) 153
Bsh1236I CGCG 3 cut(s) 380, 382, 1508
BshFI GGCC 1 cut(s) 1013
BsiHKAI GWGCWC 2 cut(s) 375, 1329
BsiSI CCGG 2 cut(s) 418, 1014
BslFI GGGAC 2 cut(s) 632, 1096
BslI CCNNNNNNNGG 1 cut(s) 751
BsmAI GTCTC 2 cut(s) 160, 968
BsmFI GGGAC 2 cut(s) 632, 1096
BsmI GAATGC 1 cut(s) 514
BsnI GGCC 1 cut(s) 1013
Bsp1286I GDGCHC 2 cut(s) 375, 1329
Bsp143I GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
Bsp1720I GCTNAGC 1 cut(s) 1274
Bsp19I CCATGG 1 cut(s) 1433
BspACI CCGC 3 cut(s) 319, 382, 1455
BspANI GGCC 1 cut(s) 1013
BspCNI CTCAG 3 cut(s) 789, 1273, 1287
BspFNI CGCG 3 cut(s) 380, 382, 1508
BspHI TCATGA 2 cut(s) 685, 865
BspLI GGNNCC 2 cut(s) 211, 756
BspPI GGATC 3 cut(s) 436, 761, 1424
BsrDI GCAATG 2 cut(s) 1143, 1163
BsrI ACTGG 3 cut(s) 822, 1107, 1274
BssECI CCNNGG 5 cut(s) 220, 716, 750, 759, 1433
BssMI GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
BssT1I CCWWGG 4 cut(s) 716, 750, 759, 1433
Bst2UI CCWGG 2 cut(s) 1167, 1396
Bst4CI ACNGT 5 cut(s) 734, 796, 1324, 1424, 1504
Bst6I CTCTTC 1 cut(s) 48
BstAPI GCANNNNNTGC 1 cut(s) 663
BstC8I GCNNGC 1 cut(s) 999
BstDEI CTNAG 3 cut(s) 776, 1274, 1281
BstDSI CCRYGG 1 cut(s) 1433
BstF5I GGATG 5 cut(s) 769, 988, 1034, 1084, 1291
BstFNI CGCG 3 cut(s) 380, 382, 1508
BstH2I RGCGCY 1 cut(s) 1281
BstHHI GCGC 6 cut(s) 382, 846, 997, 1280, 1416, 1510
BstKTI GATC 8 cut(s) 19, 364, 444, 541, 769, 946, 955, 1432
BstMAI GTCTC 2 cut(s) 160, 968
BstMBI GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
BstMWI GCNNNNNNNGC 4 cut(s) 379, 663, 994, 1286
BstNI CCWGG 2 cut(s) 1167, 1396
BstNSI RCATGY 1 cut(s) 670
BstSCI CCNGG 2 cut(s) 1165, 1394
BstUI CGCG 3 cut(s) 380, 382, 1508
BstV1I GCAGC 4 cut(s) 122, 144, 567, 1469
BstV2I GAAGAC 2 cut(s) 790, 922
BsuRI GGCC 1 cut(s) 1013
BtgI CCRYGG 1 cut(s) 1433
BtsCI GGATG 5 cut(s) 769, 988, 1034, 1084, 1291
BtsIMutI CAGTG 3 cut(s) 792, 1041, 1320
Cac8I GCNNGC 1 cut(s) 999
CciI TCATGA 2 cut(s) 685, 865
CfoI GCGC 6 cut(s) 382, 846, 997, 1280, 1416, 1510
Cfr13I GGNCC 2 cut(s) 209, 754
Csp6I GTAC 1 cut(s) 725
CviAII CATG 9 cut(s) 91, 121, 289, 658, 667, 686, 866, 1234, 1434
CviQI GTAC 1 cut(s) 725
DdeI CTNAG 3 cut(s) 776, 1274, 1281
DpnI GATC 8 cut(s) 18, 363, 443, 540, 768, 945, 954, 1431
DpnII GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
DraI TTTAAA 1 cut(s) 940
Eam1104I CTCTTC 1 cut(s) 48
EarI CTCTTC 1 cut(s) 48
Eco130I CCWWGG 4 cut(s) 716, 750, 759, 1433
Eco47I GGWCC 2 cut(s) 209, 754
Eco47III AGCGCT 1 cut(s) 1279
Eco57I CTGAAG 2 cut(s) 127, 784
EcoRI GAATTC 1 cut(s) 1070
EcoRII CCWGG 2 cut(s) 1165, 1394
EcoT14I CCWWGG 4 cut(s) 716, 750, 759, 1433
EcoT22I ATGCAT 2 cut(s) 990, 1291
ErhI CCWWGG 4 cut(s) 716, 750, 759, 1433
FaeI CATG 9 cut(s) 94, 124, 292, 661, 670, 689, 869, 1237, 1437
FaqI GGGAC 2 cut(s) 632, 1096
FatI CATG 9 cut(s) 90, 120, 288, 657, 666, 685, 865, 1233, 1433
FbaI TGATCA 1 cut(s) 538
Fnu4HI GCNGC 4 cut(s) 136, 158, 556, 1458
FokI GGATG 5 cut(s) 776, 975, 1021, 1091, 1298
Fsp4HI GCNGC 4 cut(s) 136, 158, 556, 1458
FspBI CTAG 4 cut(s) 578, 596, 701, 1224
GlaI GCGC 6 cut(s) 381, 845, 996, 1279, 1415, 1509
GluI GCNGC 4 cut(s) 136, 158, 556, 1458
GsaI CCCAGC 1 cut(s) 157
HaeII RGCGCY 1 cut(s) 1281
HaeIII GGCC 1 cut(s) 1013
HapII CCGG 2 cut(s) 418, 1014
HhaI GCGC 6 cut(s) 382, 846, 997, 1280, 1416, 1510
Hin1II CATG 9 cut(s) 94, 124, 292, 661, 670, 689, 869, 1237, 1437
Hin6I GCGC 6 cut(s) 380, 844, 995, 1278, 1414, 1508
HinP1I GCGC 6 cut(s) 380, 844, 995, 1278, 1414, 1508
HincII GTYRAC 1 cut(s) 1119
HindII GTYRAC 1 cut(s) 1119
HindIII AAGCTT 2 cut(s) 101, 1307
HinfI GANTC 6 cut(s) 43, 113, 712, 968, 1124, 1350
HpaII CCGG 2 cut(s) 418, 1014
HphI GGTGA 3 cut(s) 108, 209, 803
Hpy166II GTNNAC 2 cut(s) 1119, 1349
Hpy188III TCNNGA 4 cut(s) 110, 460, 686, 866
Hpy8I GTNNAC 2 cut(s) 1119, 1349
HpyAV CCTTC 4 cut(s) 224, 287, 1023, 1478
HpyCH4III ACNGT 5 cut(s) 734, 796, 1324, 1424, 1504
HpyF10VI GCNNNNNNNGC 4 cut(s) 379, 663, 994, 1286
HpyF3I CTNAG 3 cut(s) 776, 1274, 1281
Hsp92II CATG 9 cut(s) 94, 124, 292, 661, 670, 689, 869, 1237, 1437
HspAI GCGC 6 cut(s) 380, 844, 995, 1278, 1414, 1508
Ksp22I TGATCA 1 cut(s) 538
Kzo9I GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
LmnI GCTCC 1 cut(s) 625
Lsp1109I GCAGC 4 cut(s) 122, 144, 567, 1469
LweI GCATC 7 cut(s) 147, 975, 997, 1043, 1276, 1298, 1540
MaeI CTAG 4 cut(s) 578, 596, 701, 1224
MaeIII GTNAC 1 cut(s) 641
MalI GATC 8 cut(s) 18, 363, 443, 540, 768, 945, 954, 1431
MboI GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
MboII GAAGA 7 cut(s) 26, 65, 133, 790, 884, 922, 1291
MfeI CAATTG 2 cut(s) 204, 1107
MhlI GDGCHC 2 cut(s) 375, 1329
MlyI GAGTC 2 cut(s) 962, 1344
MmeI TCCRAC 1 cut(s) 152
Mph1103I ATGCAT 2 cut(s) 990, 1291
MroXI GAANNNNTTC 3 cut(s) 234, 402, 425
MseI TTAA 6 cut(s) 72, 414, 546, 939, 1020, 1202
MslI CAYNNNNRTG 3 cut(s) 24, 434, 639
MspA1I CMGCKG 1 cut(s) 157
MspI CCGG 2 cut(s) 418, 1014
MspR9I CCNGG 2 cut(s) 1167, 1396
MunI CAATTG 2 cut(s) 204, 1107
Mva1269I GAATGC 1 cut(s) 514
MvaI CCWGG 2 cut(s) 1167, 1396
MvnI CGCG 3 cut(s) 380, 382, 1508
MwoI GCNNNNNNNGC 4 cut(s) 379, 663, 994, 1286
NcoI CCATGG 1 cut(s) 1433
NdeII GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
NlaIII CATG 9 cut(s) 94, 124, 292, 661, 670, 689, 869, 1237, 1437
NlaIV GGNNCC 2 cut(s) 211, 756
NmuCI GTSAC 1 cut(s) 641
NsiI ATGCAT 2 cut(s) 990, 1291
NspI RCATGY 1 cut(s) 670
OliI CACNNNNGTG 1 cut(s) 639
PagI TCATGA 2 cut(s) 685, 865
PctI GAATGC 1 cut(s) 514
PdmI GAANNNNTTC 3 cut(s) 234, 402, 425
PfeI GAWTC 4 cut(s) 43, 113, 712, 1124
PkrI GCNGC 4 cut(s) 137, 159, 557, 1459
PleI GAGTC 2 cut(s) 962, 1344
PpsI GAGTC 2 cut(s) 962, 1344
Psp6I CCWGG 2 cut(s) 1165, 1394
PspFI CCCAGC 1 cut(s) 153
PspGI CCWGG 2 cut(s) 1165, 1394
PspN4I GGNNCC 2 cut(s) 211, 756
PspPI GGNCC 2 cut(s) 209, 754
PvuII CAGCTG 1 cut(s) 157
RsaI GTAC 1 cut(s) 726
RsaNI GTAC 1 cut(s) 725
RseI CAYNNNNRTG 3 cut(s) 24, 434, 639
SaqAI TTAA 6 cut(s) 72, 414, 546, 939, 1020, 1202
SatI GCNGC 4 cut(s) 136, 158, 556, 1458
Sau3AI GATC 8 cut(s) 16, 361, 441, 538, 766, 943, 952, 1429
Sau96I GGNCC 2 cut(s) 209, 754
SchI GAGTC 2 cut(s) 962, 1344
ScrFI CCNGG 2 cut(s) 1167, 1396
SduI GDGCHC 2 cut(s) 375, 1329
SfaNI GCATC 7 cut(s) 147, 975, 997, 1043, 1276, 1298, 1540
SinI GGWCC 2 cut(s) 209, 754
SmiMI CAYNNNNRTG 3 cut(s) 24, 434, 639
SmlI CTYRAG 1 cut(s) 283
SmoI CTYRAG 1 cut(s) 283
SsiI CCGC 3 cut(s) 319, 382, 1455
SspI AATATT 1 cut(s) 309
SspMI CTAG 4 cut(s) 578, 596, 701, 1224
StyD4I CCNGG 2 cut(s) 1165, 1394
StyI CCWWGG 4 cut(s) 716, 750, 759, 1433
TaaI ACNGT 5 cut(s) 734, 796, 1324, 1424, 1504
TaqI TCGA 2 cut(s) 41, 923
TatI WGTACW 1 cut(s) 724
TfiI GAWTC 4 cut(s) 43, 113, 712, 1124
Tru1I TTAA 6 cut(s) 72, 414, 546, 939, 1020, 1202
Tru9I TTAA 6 cut(s) 72, 414, 546, 939, 1020, 1202
TscAI CASTG 3 cut(s) 799, 1048, 1327
TseFI GTSAC 1 cut(s) 641
TseI GCWGC 4 cut(s) 135, 157, 555, 1457
Tsp45I GTSAC 1 cut(s) 641
TspDTI ATGAA 9 cut(s) 301, 305, 395, 418, 825, 854, 885, 1076, 1116
TspGWI ACGGA 1 cut(s) 1136
TspRI CASTG 3 cut(s) 799, 1048, 1327
VpaK11BI GGWCC 2 cut(s) 209, 754
XapI RAATTY 4 cut(s) 478, 1022, 1070, 1439
XceI RCATGY 1 cut(s) 670
XcmI CCANNNNNNNNNTGG 1 cut(s) 655
XmnI GAANNNNTTC 3 cut(s) 234, 402, 425
XspI CTAG 4 cut(s) 578, 596, 701, 1224
Zsp2I ATGCAT 2 cut(s) 990, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.