Rh3CG366100

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000188
Physical Location & Seq
Forward (+)
46063498 .. 46064892
1395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG366100.1

Sequence Viewer

Length: 1395 bp
ATGAGCAACTTAGATCAGATCCAATTCAAAGGCATGGAAGGTAGCAGTGATATAGAAAAGTGTCAAGTGGATAAAAGCGTTCCAGTTCATCTAGATGGTAGAGGTATGACTGACATATGTAAAAGAACCTGCTTCACTGAAGAGCTTTTGGAGGCCCAATCACCTTTGACTTGTTCATGTAGCATATTCAGAGTTCCCCAGGTGCTACGAAGACGAAAAGTGAAGGCATACAAACCTGACATAGTCTCAATCGGGCCCCTTCACCGAGGTGCTGACGAAGAATTTCAAATCGTGGAAAATGTGAAAAAATGGTATTTAAAATGTTTTCTCGTGCGCCAGCAACCGAACCCGACAGGACTGAGTATGTCGGACGTGGAGACGTTGACTGAAGAGATCAAGGGACAGGAACTGGATAAACGCGCCCGGCATTGTTATCCAGACCGATGCAATCATCTTGACCAAAACGACTTCATACAGATGCTCATACTTGATGGTTGTTTCTTGATAGAATTATTTCGGAAGGCACAATCGGTAATGCGACAAGACAATGACGACCCTATTTTCAACGTGCCTTATATGCTCGAATATTTATACCACGATCTTCTGTTACTCGAAAATCAGCTTCCCTGGTTTGTGCTCGAGTTTTTCTATAATCTAATTGAGAGTGGCAACACTAACTCTCTCAGTAAATTGGTATTAGACTTCTTCAAAAATTCAGTGGCTGATGCCGAAATTTTGAGGAACCCCGATCCCAACTCTTCTGGTATGATTCTTCACATACTTGATTTTATTAGAACTGCCCTCGTTCCAACCCCAAGTTTGACAGCTGCCCACGAACGAGACAACCACCTCCCGCAAAGGATACCTAGTGTCACTGCTCTTTCAGACGTAGGAGTTAAATTTAAAAAGGGCCGCCCAGGTTGCATATTCGACATAACGTTCAAAGGTGGCGTTTTCACCATTCCTCCTCTGGCTATCAATGAGAGGACTGGTCATTTGTTCAGTAACCTTATGGCCTTCGAGCTGTGCTATCACAGTTGCACGCACAAGATAATATCCTATGCGGTCTTGATGACTTACCTCATCGATACGAAAAATGATGCGGATCTTCTAAGTGAGGAAAATATAGTAGCCAACTTGGATGATATCGATGCTTCAAAGTTCTTCAAAGATCTAACCAATGACACCAGAGTCATTGATTTTGTCTACGAGGGACTCTGCGAAGAAGTGCATAAATATCTCAAAGCTCCACAGAACAGGATACCATGGAACAAGTGGAGCAAGAAATTGAGACGTGATTATTTTGAGACACCATGGTCTACTATCTCTTTTTTTGCTGCTTTTGTTCTCCTGGTCCTAACCTTCTTGCAGACCGTATACACAGTCCAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

464

Amino Acids

53.45

Weight (kDa)

5.7

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 62 - 453 8e-103 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1190, 1315
Acc36I ACCTGC 1 cut(s) 137
AccI GTMKAC 3 cut(s) 1206, 1319, 1377
AccII CGCG 1 cut(s) 420
AciI CCGC 4 cut(s) 854, 913, 1064, 1103
AclI AACGTT 1 cut(s) 938
AclWI GGATC 3 cut(s) 13, 743, 1113
AcsI RAATTY 4 cut(s) 281, 712, 732, 899
AcuI CTGAAG 2 cut(s) 159, 408
AgsI TTSAA 7 cut(s) 28, 287, 565, 709, 943, 1158, 1168
AjiI CACGTC 2 cut(s) 373, 1295
AjnI CCWGG 4 cut(s) 198, 626, 916, 1350
AleI CACNNNNGTG 1 cut(s) 267
AluBI AGCT 5 cut(s) 145, 622, 827, 1024, 1247
AluI AGCT 5 cut(s) 145, 622, 827, 1024, 1247
Alw21I GWGCWC 1 cut(s) 639
Alw26I GTCTC 5 cut(s) 250, 371, 834, 1285, 1301
AlwI GGATC 3 cut(s) 13, 743, 1113
AlwNI CAGNNNCTG 2 cut(s) 409, 722
Ama87I CYCGRG 1 cut(s) 638
AoxI GGCC 4 cut(s) 153, 254, 910, 1014
ApaI GGGCCC 1 cut(s) 258
ApeKI GCWGC 2 cut(s) 827, 1337
ApoI RAATTY 4 cut(s) 281, 712, 732, 899
ArsI GACNNNNNNTTYG 2 cut(s) 979, 1011
Asp700I GAANNNNTTC 2 cut(s) 282, 513
AspLEI GCGC 2 cut(s) 336, 422
AspS9I GGNCC 5 cut(s) 154, 254, 255, 910, 1354
AsuC2I CCSGG 1 cut(s) 424
AsuHPI GGTGA 3 cut(s) 153, 254, 949
AvaI CYCGRG 1 cut(s) 638
AvaII GGWCC 1 cut(s) 1354
BaeGI GKGCMC 1 cut(s) 258
BanII GRGCYC 1 cut(s) 258
BauI CACGAG 1 cut(s) 329
BbsI GAAGAC 1 cut(s) 217
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 2 cut(s) 814, 1324
BccI CCATC 2 cut(s) 89, 485
BciT130I CCWGG 4 cut(s) 200, 628, 918, 1352
BciVI GTATCC 2 cut(s) 855, 1254
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 5 cut(s) 250, 371, 834, 1285, 1301
BfaI CTAG 2 cut(s) 92, 867
BfuAI ACCTGC 1 cut(s) 137
BfuI GTATCC 2 cut(s) 855, 1254
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 3 cut(s) 828, 913, 1338
BlsI GCNGC 3 cut(s) 829, 914, 1339
Bme1390I CCNGG 5 cut(s) 200, 424, 628, 918, 1352
Bme18I GGWCC 1 cut(s) 1354
BmeT110I CYCGRG 1 cut(s) 638
BmgBI CACGTC 2 cut(s) 373, 1295
BmgT120I GGNCC 5 cut(s) 154, 254, 255, 910, 1354
BmiI GGNNCC 3 cut(s) 256, 257, 743
BmrFI CCNGG 5 cut(s) 200, 424, 628, 918, 1352
BmsI GCATC 5 cut(s) 434, 468, 715, 1090, 1141
BpiI GAAGAC 1 cut(s) 217
BpuMI CCSGG 1 cut(s) 424
Bsa29I ATCGAT 2 cut(s) 1086, 1149
BsaBI GATNNNNATC 1 cut(s) 1104
BsaJI CCNNGG 6 cut(s) 198, 265, 626, 916, 1265, 1313
BsaXI ACNNNNNCTCC 2 cut(s) 949, 979
Bse1I ACTGG 3 cut(s) 83, 414, 994
Bse8I GATNNNNATC 1 cut(s) 1104
BseBI CCWGG 4 cut(s) 200, 628, 918, 1352
BseCI ATCGAT 2 cut(s) 1086, 1149
BseDI CCNNGG 6 cut(s) 198, 265, 626, 916, 1265, 1313
BseGI GGATG 1 cut(s) 1147
BseJI GATNNNNATC 1 cut(s) 1104
BseMII CTCAG 2 cut(s) 350, 697
BseNI ACTGG 3 cut(s) 83, 414, 994
BseRI GAGGAG 1 cut(s) 957
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 2 cut(s) 814, 1324
Bsh1236I CGCG 1 cut(s) 420
BshFI GGCC 4 cut(s) 155, 256, 912, 1016
BshVI ATCGAT 2 cut(s) 1086, 1149
BsiHKAI GWGCWC 1 cut(s) 639
BsiHKCI CYCGRG 1 cut(s) 638
BsiSI CCGG 1 cut(s) 424
BslFI GGGAC 2 cut(s) 414, 1227
BsmAI GTCTC 5 cut(s) 250, 371, 834, 1285, 1301
BsmBI CGTCTC 2 cut(s) 371, 1285
BsmFI GGGAC 2 cut(s) 414, 1227
BsnI GGCC 4 cut(s) 155, 256, 912, 1016
BsoBI CYCGRG 1 cut(s) 638
Bsp120I GGGCCC 1 cut(s) 254
Bsp1286I GDGCHC 2 cut(s) 258, 639
Bsp143I GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
Bsp19I CCATGG 2 cut(s) 1265, 1313
BspACI CCGC 4 cut(s) 854, 913, 1064, 1103
BspANI GGCC 4 cut(s) 155, 256, 912, 1016
BspCNI CTCAG 2 cut(s) 351, 696
BspDI ATCGAT 2 cut(s) 1086, 1149
BspFNI CGCG 1 cut(s) 420
BspLI GGNNCC 3 cut(s) 256, 257, 743
BspMI ACCTGC 1 cut(s) 137
BspPI GGATC 3 cut(s) 13, 743, 1113
BspQI GCTCTTC 1 cut(s) 135
BsrI ACTGG 3 cut(s) 83, 414, 994
BssECI CCNNGG 6 cut(s) 198, 265, 626, 916, 1265, 1313
BssMI GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
BssNAI GTATAC 1 cut(s) 1378
BssSI CACGAG 1 cut(s) 329
BssT1I CCWWGG 2 cut(s) 1265, 1313
Bst1107I GTATAC 1 cut(s) 1378
Bst2BI CACGAG 1 cut(s) 329
Bst2UI CCWGG 4 cut(s) 200, 628, 918, 1352
Bst4CI ACNGT 3 cut(s) 1037, 1375, 1384
Bst6I CTCTTC 3 cut(s) 135, 384, 763
BstC8I GCNNGC 2 cut(s) 338, 1043
BstDEI CTNAG 4 cut(s) 10, 359, 683, 1112
BstDSI CCRYGG 2 cut(s) 1265, 1313
BstF5I GGATG 1 cut(s) 1147
BstFNI CGCG 1 cut(s) 420
BstHHI GCGC 2 cut(s) 336, 422
BstKTI GATC 7 cut(s) 16, 21, 396, 601, 751, 1108, 1174
BstMAI GTCTC 5 cut(s) 250, 371, 834, 1285, 1301
BstMBI GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
BstMWI GCNNNNNNNGC 2 cut(s) 577, 921
BstNI CCWGG 4 cut(s) 200, 628, 918, 1352
BstSCI CCNGG 5 cut(s) 198, 422, 626, 916, 1350
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 1 cut(s) 420
BstV1I GCAGC 2 cut(s) 814, 1324
BstV2I GAAGAC 1 cut(s) 217
BstX2I RGATCY 3 cut(s) 18, 1105, 1171
BstYI RGATCY 3 cut(s) 18, 1105, 1171
BstZ17I GTATAC 1 cut(s) 1378
Bsu15I ATCGAT 2 cut(s) 1086, 1149
BsuI GTATCC 2 cut(s) 855, 1254
BsuRI GGCC 4 cut(s) 155, 256, 912, 1016
BsuTUI ATCGAT 2 cut(s) 1086, 1149
BtgI CCRYGG 2 cut(s) 1265, 1313
BtrI CACGTC 2 cut(s) 373, 1295
BtsCI GGATG 1 cut(s) 1147
BtsI GCAGTG 2 cut(s) 52, 873
BtsIMutI CAGTG 4 cut(s) 52, 135, 723, 873
BveI ACCTGC 1 cut(s) 137
Cac8I GCNNGC 2 cut(s) 338, 1043
CaiI CAGNNNCTG 2 cut(s) 409, 722
CfoI GCGC 2 cut(s) 336, 422
Cfr13I GGNCC 5 cut(s) 154, 254, 255, 910, 1354
ClaI ATCGAT 2 cut(s) 1086, 1149
CviAII CATG 4 cut(s) 34, 177, 1266, 1314
DdeI CTNAG 4 cut(s) 10, 359, 683, 1112
DpnI GATC 7 cut(s) 15, 20, 395, 600, 750, 1107, 1173
DpnII GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
DraI TTTAAA 2 cut(s) 318, 904
DrdI GACNNNNNNGTC 2 cut(s) 1190, 1315
DseDI GACNNNNNNGTC 2 cut(s) 1190, 1315
Eam1104I CTCTTC 3 cut(s) 135, 384, 763
EarI CTCTTC 3 cut(s) 135, 384, 763
Eco130I CCWWGG 2 cut(s) 1265, 1313
Eco24I GRGCYC 1 cut(s) 258
Eco32I GATATC 1 cut(s) 1147
Eco47I GGWCC 1 cut(s) 1354
Eco57I CTGAAG 2 cut(s) 159, 408
Eco88I CYCGRG 1 cut(s) 638
EcoO109I RGGNCCY 1 cut(s) 255
EcoRII CCWGG 4 cut(s) 198, 626, 916, 1350
EcoRV GATATC 1 cut(s) 1147
EcoT14I CCWWGG 2 cut(s) 1265, 1313
EcoT38I GRGCYC 1 cut(s) 258
ErhI CCWWGG 2 cut(s) 1265, 1313
Esp3I CGTCTC 2 cut(s) 371, 1285
FaeI CATG 4 cut(s) 37, 180, 1269, 1317
FaqI GGGAC 2 cut(s) 414, 1227
FatI CATG 4 cut(s) 33, 176, 1265, 1313
FauI CCCGC 1 cut(s) 861
FauNDI CATATG 1 cut(s) 116
FblI GTMKAC 3 cut(s) 1206, 1319, 1377
Fnu4HI GCNGC 3 cut(s) 828, 913, 1338
FokI GGATG 1 cut(s) 1154
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 3 cut(s) 828, 913, 1338
FspBI CTAG 2 cut(s) 92, 867
GlaI GCGC 2 cut(s) 335, 421
GluI GCNGC 3 cut(s) 828, 913, 1338
HaeIII GGCC 4 cut(s) 155, 256, 912, 1016
HapII CCGG 1 cut(s) 424
HhaI GCGC 2 cut(s) 336, 422
Hin1II CATG 4 cut(s) 37, 180, 1269, 1317
Hin6I GCGC 2 cut(s) 334, 420
HinP1I GCGC 2 cut(s) 334, 420
HincII GTYRAC 1 cut(s) 384
HindII GTYRAC 1 cut(s) 384
HinfI GANTC 3 cut(s) 769, 1191, 1215
HpaII CCGG 1 cut(s) 424
HphI GGTGA 3 cut(s) 153, 254, 949
Hpy166II GTNNAC 4 cut(s) 384, 1207, 1320, 1378
Hpy188I TCNGA 5 cut(s) 18, 191, 370, 519, 886
Hpy188III TCNNGA 5 cut(s) 92, 437, 455, 502, 1069
Hpy8I GTNNAC 4 cut(s) 384, 1207, 1320, 1378
HpyAV CCTTC 6 cut(s) 32, 217, 269, 514, 1027, 1372
HpyCH4III ACNGT 3 cut(s) 1037, 1375, 1384
HpyCH4IV ACGT 6 cut(s) 372, 380, 567, 888, 938, 1294
HpyCH4V TGCA 5 cut(s) 447, 924, 1041, 1231, 1369
HpyF10VI GCNNNNNNNGC 2 cut(s) 577, 921
HpyF3I CTNAG 4 cut(s) 10, 359, 683, 1112
HpySE526I ACGT 6 cut(s) 372, 380, 567, 888, 938, 1294
Hsp92II CATG 4 cut(s) 37, 180, 1269, 1317
HspAI GCGC 2 cut(s) 334, 420
Kzo9I GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
LguI GCTCTTC 1 cut(s) 135
LmnI GCTCC 2 cut(s) 1252, 1278
Lsp1109I GCAGC 2 cut(s) 814, 1324
LweI GCATC 5 cut(s) 434, 468, 715, 1090, 1141
MaeI CTAG 2 cut(s) 92, 867
MaeII ACGT 6 cut(s) 372, 380, 567, 888, 938, 1294
MaeIII GTNAC 3 cut(s) 606, 871, 1004
MalI GATC 7 cut(s) 15, 20, 395, 600, 750, 1107, 1173
MboI GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
MflI RGATCY 3 cut(s) 18, 1105, 1171
MhlI GDGCHC 2 cut(s) 258, 639
MluCI AATT 9 cut(s) 23, 281, 509, 657, 689, 712, 732, 899, 1286
MlyI GAGTC 2 cut(s) 1200, 1209
MmeI TCCRAC 2 cut(s) 348, 833
MroXI GAANNNNTTC 2 cut(s) 282, 513
MseI TTAA 3 cut(s) 317, 897, 903
MslI CAYNNNNRTG 3 cut(s) 93, 267, 476
MspA1I CMGCKG 1 cut(s) 827
MspI CCGG 1 cut(s) 424
MspR9I CCNGG 5 cut(s) 200, 424, 628, 918, 1352
MvaI CCWGG 4 cut(s) 200, 628, 918, 1352
MvnI CGCG 1 cut(s) 420
MwoI GCNNNNNNNGC 2 cut(s) 577, 921
NciI CCSGG 1 cut(s) 424
NcoI CCATGG 2 cut(s) 1265, 1313
NdeI CATATG 1 cut(s) 116
NdeII GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
NlaIII CATG 4 cut(s) 37, 180, 1269, 1317
NlaIV GGNNCC 3 cut(s) 256, 257, 743
NmuCI GTSAC 1 cut(s) 871
OliI CACNNNNGTG 1 cut(s) 267
PaeR7I CTCGAG 1 cut(s) 638
PciSI GCTCTTC 1 cut(s) 135
PdmI GAANNNNTTC 2 cut(s) 282, 513
PfeI GAWTC 1 cut(s) 769
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 3 cut(s) 829, 914, 1339
PleI GAGTC 2 cut(s) 1199, 1209
PpsI GAGTC 2 cut(s) 1199, 1209
Psp1406I AACGTT 1 cut(s) 938
Psp6I CCWGG 4 cut(s) 198, 626, 916, 1350
PspGI CCWGG 4 cut(s) 198, 626, 916, 1350
PspN4I GGNNCC 3 cut(s) 256, 257, 743
PspOMI GGGCCC 1 cut(s) 254
PspPI GGNCC 5 cut(s) 154, 254, 255, 910, 1354
PspXI VCTCGAGB 1 cut(s) 638
PstNI CAGNNNCTG 2 cut(s) 409, 722
PsuI RGATCY 3 cut(s) 18, 1105, 1171
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 827
RseI CAYNNNNRTG 3 cut(s) 93, 267, 476
SapI GCTCTTC 1 cut(s) 135
SaqAI TTAA 3 cut(s) 317, 897, 903
SatI GCNGC 3 cut(s) 828, 913, 1338
Sau3AI GATC 7 cut(s) 13, 18, 393, 598, 748, 1105, 1171
Sau96I GGNCC 5 cut(s) 154, 254, 255, 910, 1354
SchI GAGTC 2 cut(s) 1200, 1209
ScrFI CCNGG 5 cut(s) 200, 424, 628, 918, 1352
SduI GDGCHC 2 cut(s) 258, 639
SfaNI GCATC 5 cut(s) 434, 468, 715, 1090, 1141
Sfr274I CTCGAG 1 cut(s) 638
SinI GGWCC 1 cut(s) 1354
SlaI CTCGAG 1 cut(s) 638
SmiMI CAYNNNNRTG 3 cut(s) 93, 267, 476
SmlI CTYRAG 1 cut(s) 638
SmoI CTYRAG 1 cut(s) 638
Sse9I AATT 9 cut(s) 23, 281, 509, 657, 689, 712, 732, 899, 1286
SsiI CCGC 4 cut(s) 854, 913, 1064, 1103
SspI AATATT 1 cut(s) 587
SspMI CTAG 2 cut(s) 92, 867
StyD4I CCNGG 5 cut(s) 198, 422, 626, 916, 1350
StyI CCWWGG 2 cut(s) 1265, 1313
TaaI ACNGT 3 cut(s) 1037, 1375, 1384
TaiI ACGT 6 cut(s) 375, 383, 570, 891, 941, 1297
TaqI TCGA 7 cut(s) 582, 612, 639, 930, 1020, 1086, 1149
TaqII GACCGA 1 cut(s) 456
TasI AATT 9 cut(s) 23, 281, 509, 657, 689, 712, 732, 899, 1286
TauI GCSGC 1 cut(s) 915
TfiI GAWTC 1 cut(s) 769
Tru1I TTAA 3 cut(s) 317, 897, 903
Tru9I TTAA 3 cut(s) 317, 897, 903
TscAI CASTG 4 cut(s) 52, 142, 723, 880
TseFI GTSAC 1 cut(s) 871
TseI GCWGC 2 cut(s) 827, 1337
Tsp45I GTSAC 1 cut(s) 871
TspDTI ATGAA 3 cut(s) 77, 165, 460
TspRI CASTG 4 cut(s) 52, 142, 723, 880
Tth111I GACNNNGTC 1 cut(s) 242
VpaK11BI GGWCC 1 cut(s) 1354
XapI RAATTY 4 cut(s) 281, 712, 732, 899
XbaI TCTAGA 1 cut(s) 91
XcmI CCANNNNNNNNNTGG 2 cut(s) 967, 1272
XhoI CTCGAG 1 cut(s) 638
XmiI GTMKAC 3 cut(s) 1206, 1319, 1377
XmnI GAANNNNTTC 2 cut(s) 282, 513
XspI CTAG 2 cut(s) 92, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.