MD08G1225300.v1.1

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000188
Physical Location & Seq
Reverse (-)
29052192 .. 29053541
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1225300.v1.1.491

Sequence Viewer

Length: 1350 bp
ATGGACATAGACATTTTACTTGAAGCGTCGAAGAACACCTCGACGCCAAAGCTTCCCAGGTGCATCTTCAGAGTTCCTGAAGTTCTCCGCAGACATAACGTACTGGCATACGCACCTGACATTATCTCAATCGGGCCCTATCATCCACGAGACAATGTACAATTTCAAGCTATGGAAAATCTGAAATACGAGTATTTGCGCGACCTTCTCTTACACATGGATAGGTCACACGACAGGGATATGGAGTTAGAAGCATCGATCAATAAACTCGTCAATTACATTTTAGATCACAAGAAACTACAAGCCATGTCTGAGTTTGAGAAAAAAGCTCGTGATTTTTATGCACATCCATTTGATCCTCCGATGAAAATGGAGTTTCTCCACATGATGATACTTGATGGTTGCTTCCTAGTACAAATATTTAGGAAGTTTGTGTATAAGGAACAGAGGGACATTAATGACCCTTTATTCAACATGGATTGCATGTTCCAGTACATATGCCATGACCTCTTGCTCTTAGAAAATCAGATTCCTTGGTTTGTCCTCCAGGACGTATATGAGCTCACCGTCAAGTATTACCAGAACCCTGAGCCCTGCCTCTCGGTGCTCATCCTCACCGCGCTCAGCTCACAACCACAACTGTCCCATAACTGCCGGTGGTATCTGGATCATCTGGATCATCTAAGAGAAAATAATTACAAAGAGGATGAAAGTGTGGTCCACATTCTCGATCTCATAAGAACTTCCATAGTTTTCTCCTTCACTGAACGCTACGAGAAACCTTTCCACGATGCAAAGGTACAACTGATAGCTTCAGCAACTGCTCTTTCTGAGGCCGGCATTAGATTCAAAATGAGCTCCGATAAATGTAAAAGCATAATGAACATAGAATGCGAGAATGGGGTTATTATGATTCCGCATCTAGAAATTGGAGAGTTAACTGAATCGATATTCAGGAACCTGATCGCCTTGGAGCAATGCTGTTATGGTCGTTCGCACAAAATCACATCTTATGCCGTTCTGATGGATAACCTCCTCGGTTCTAGCAACGATATAAAATTTCTCTGCGACAAGGGAATTATACGTAACTGGCTGAGCGCTGAAAATGGTTCTGAGTTCTTCAGCAAGCTTTACTGCGACACGGTGCTTACTTATTTCTACTATGATGGACTCTGTACTCGAGTGAAGGATTACCAAACAGCATCGAGGAAGTGGCGAAAAACATTGAAGCGTAACTATTGTTCAGATCCATGGAAAGCCACCTCCTGGATTGTAGCAACTATCCTTCTGATTCTCACCGCATTGCAGACTGCATACGCCATTACGCAATACTATTCTCCTCCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

450

Amino Acids

52.69

Weight (kDa)

6.12

Isoelectric Point (pI)

46.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 22 - 432 3.5e-98 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1266
AccII CGCG 2 cut(s) 201, 620
AciI CCGC 4 cut(s) 88, 618, 917, 1299
AclWI GGATC 4 cut(s) 350, 675, 684, 1241
AcsI RAATTY 1 cut(s) 1058
AcuI CTGAAG 4 cut(s) 52, 99, 798, 1105
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 6 cut(s) 102, 159, 414, 494, 801, 1177
AfeI AGCGCT 1 cut(s) 1099
AfiI CCNNNNNNNGG 1 cut(s) 1266
AgsI TTSAA 5 cut(s) 23, 167, 472, 850, 1228
AjnI CCWGG 3 cut(s) 56, 546, 1265
AloI GAACNNNNNNTCC 2 cut(s) 470, 502
AluBI AGCT 8 cut(s) 52, 170, 329, 562, 627, 812, 858, 1129
AluI AGCT 8 cut(s) 52, 170, 329, 562, 627, 812, 858, 1129
Alw21I GWGCWC 3 cut(s) 564, 609, 860
Alw26I GTCTC 1 cut(s) 144
AlwI GGATC 4 cut(s) 350, 675, 684, 1241
AlwNI CAGNNNCTG 1 cut(s) 821
Ama87I CYCGRG 1 cut(s) 1179
Aor51HI AGCGCT 1 cut(s) 1099
AoxI GGCC 2 cut(s) 134, 834
ApaI GGGCCC 1 cut(s) 138
ApoI RAATTY 1 cut(s) 1058
AseI ATTAAT 1 cut(s) 456
Asp700I GAANNNNTTC 1 cut(s) 782
AspLEI GCGC 3 cut(s) 201, 622, 1100
AspS9I GGNCC 3 cut(s) 134, 135, 718
AsuHPI GGTGA 3 cut(s) 556, 607, 1288
AvaI CYCGRG 1 cut(s) 1179
AvaII GGWCC 1 cut(s) 718
BaeGI GKGCMC 1 cut(s) 138
BanII GRGCYC 4 cut(s) 138, 564, 594, 860
BauI CACGAG 2 cut(s) 147, 330
Bbv12I GWGCWC 3 cut(s) 564, 609, 860
BccI CCATC 3 cut(s) 392, 1018, 1160
BceAI ACGGC 1 cut(s) 1001
BciT130I CCWGG 3 cut(s) 58, 548, 1267
BcoDI GTCTC 1 cut(s) 144
BfaI CTAG 3 cut(s) 410, 923, 1044
BfoI RGCGCY 1 cut(s) 1101
BlpI GCTNAGC 2 cut(s) 623, 1094
Bme1390I CCNGG 3 cut(s) 58, 548, 1267
Bme18I GGWCC 1 cut(s) 718
BmeT110I CYCGRG 1 cut(s) 1179
BmgT120I GGNCC 3 cut(s) 134, 135, 718
BmiI GGNNCC 2 cut(s) 136, 959
BmrFI CCNGG 3 cut(s) 58, 548, 1267
BmsI GCATC 5 cut(s) 72, 263, 781, 928, 1211
BpmI CTGGAG 2 cut(s) 530, 1326
Bpu10I CCTNAGC 1 cut(s) 588
Bpu1102I GCTNAGC 2 cut(s) 623, 1094
Bsa29I ATCGAT 2 cut(s) 257, 947
BsaAI YACGTR 1 cut(s) 1085
BsaHI GRCGYC 1 cut(s) 44
BsaJI CCNNGG 5 cut(s) 56, 533, 969, 1036, 1250
Bsc4I CCNNNNNNNGG 1 cut(s) 1266
Bse118I RCCGGY 2 cut(s) 654, 836
Bse1I ACTGG 3 cut(s) 108, 490, 1094
Bse3DI GCAATG 2 cut(s) 983, 1301
BseBI CCWGG 3 cut(s) 58, 548, 1267
BseCI ATCGAT 2 cut(s) 257, 947
BseDI CCNNGG 5 cut(s) 56, 533, 969, 1036, 1250
BseGI GGATG 4 cut(s) 142, 346, 609, 712
BseLI CCNNNNNNNGG 1 cut(s) 1266
BseMI GCAATG 2 cut(s) 983, 1301
BseMII CTCAG 6 cut(s) 303, 579, 637, 822, 1085, 1104
BseNI ACTGG 3 cut(s) 108, 490, 1094
BseRI GAGGAG 2 cut(s) 1025, 1329
BseSI GKGCMC 1 cut(s) 138
Bsh1236I CGCG 2 cut(s) 201, 620
BshFI GGCC 2 cut(s) 136, 836
BshVI ATCGAT 2 cut(s) 257, 947
BsiHKAI GWGCWC 3 cut(s) 564, 609, 860
BsiHKCI CYCGRG 1 cut(s) 1179
BsiSI CCGG 2 cut(s) 655, 837
BslFI GGGAC 2 cut(s) 464, 628
BslI CCNNNNNNNGG 1 cut(s) 1266
BsmAI GTCTC 1 cut(s) 144
BsmFI GGGAC 2 cut(s) 464, 628
BsmI GAATGC 1 cut(s) 896
BsnI GGCC 2 cut(s) 136, 836
BsoBI CYCGRG 1 cut(s) 1179
Bsp120I GGGCCC 1 cut(s) 134
Bsp1286I GDGCHC 5 cut(s) 138, 564, 594, 609, 860
Bsp1407I TGTACA 1 cut(s) 157
Bsp143I GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
Bsp1720I GCTNAGC 2 cut(s) 623, 1094
Bsp19I CCATGG 1 cut(s) 1250
BspACI CCGC 4 cut(s) 88, 618, 917, 1299
BspANI GGCC 2 cut(s) 136, 836
BspCNI CTCAG 6 cut(s) 304, 580, 636, 823, 1086, 1105
BspDI ATCGAT 2 cut(s) 257, 947
BspFNI CGCG 2 cut(s) 201, 620
BspLI GGNNCC 2 cut(s) 136, 959
BspPI GGATC 4 cut(s) 350, 675, 684, 1241
BsrDI GCAATG 2 cut(s) 983, 1301
BsrFI RCCGGY 2 cut(s) 654, 836
BsrGI TGTACA 1 cut(s) 157
BsrI ACTGG 3 cut(s) 108, 490, 1094
BssAI RCCGGY 2 cut(s) 654, 836
BssECI CCNNGG 5 cut(s) 56, 533, 969, 1036, 1250
BssMI GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
BssNI GRCGYC 1 cut(s) 44
BssSI CACGAG 2 cut(s) 147, 330
BssT1I CCWWGG 3 cut(s) 533, 969, 1250
Bst2BI CACGAG 2 cut(s) 147, 330
Bst2UI CCWGG 3 cut(s) 58, 548, 1267
Bst4CI ACNGT 3 cut(s) 568, 642, 1144
BstACI GRCGYC 1 cut(s) 44
BstAUI TGTACA 1 cut(s) 157
BstBAI YACGTR 1 cut(s) 1085
BstC8I GCNNGC 2 cut(s) 838, 1127
BstDEI CTNAG 8 cut(s) 312, 517, 588, 623, 683, 831, 1094, 1113
BstDSI CCRYGG 1 cut(s) 1250
BstF5I GGATG 4 cut(s) 142, 346, 609, 712
BstFNI CGCG 2 cut(s) 201, 620
BstH2I RGCGCY 1 cut(s) 1101
BstHHI GCGC 3 cut(s) 201, 622, 1100
BstKTI GATC 8 cut(s) 261, 289, 358, 670, 679, 733, 966, 1249
BstMAI GTCTC 1 cut(s) 144
BstMBI GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
BstNI CCWGG 3 cut(s) 58, 548, 1267
BstNSI RCATGY 1 cut(s) 487
BstSCI CCNGG 3 cut(s) 56, 546, 1265
BstSLI GKGCMC 1 cut(s) 138
BstSNI TACGTA 1 cut(s) 1085
BstUI CGCG 2 cut(s) 201, 620
BstX2I RGATCY 1 cut(s) 1246
BstYI RGATCY 1 cut(s) 1246
Bsu15I ATCGAT 2 cut(s) 257, 947
BsuRI GGCC 2 cut(s) 136, 836
BsuTUI ATCGAT 2 cut(s) 257, 947
BtgI CCRYGG 1 cut(s) 1250
BtsCI GGATG 4 cut(s) 142, 346, 609, 712
BtsIMutI CAGTG 1 cut(s) 762
Cac8I GCNNGC 2 cut(s) 838, 1127
CaiI CAGNNNCTG 1 cut(s) 821
CfoI GCGC 3 cut(s) 201, 622, 1100
Cfr10I RCCGGY 2 cut(s) 654, 836
Cfr13I GGNCC 3 cut(s) 134, 135, 718
ClaI ATCGAT 2 cut(s) 257, 947
CseI GACGC 2 cut(s) 15, 52
Csp6I GTAC 6 cut(s) 101, 158, 413, 493, 800, 1176
CviAII CATG 8 cut(s) 217, 307, 385, 475, 484, 503, 1251, 1347
CviQI GTAC 6 cut(s) 101, 158, 413, 493, 800, 1176
DdeI CTNAG 8 cut(s) 312, 517, 588, 623, 683, 831, 1094, 1113
DpnI GATC 8 cut(s) 260, 288, 357, 669, 678, 732, 965, 1248
DpnII GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
Ecl136II GAGCTC 2 cut(s) 562, 858
Eco105I TACGTA 1 cut(s) 1085
Eco130I CCWWGG 3 cut(s) 533, 969, 1250
Eco24I GRGCYC 4 cut(s) 138, 564, 594, 860
Eco47I GGWCC 1 cut(s) 718
Eco47III AGCGCT 1 cut(s) 1099
Eco53kI GAGCTC 2 cut(s) 562, 858
Eco57I CTGAAG 4 cut(s) 52, 99, 798, 1105
Eco88I CYCGRG 1 cut(s) 1179
EcoICRI GAGCTC 2 cut(s) 562, 858
EcoO109I RGGNCCY 1 cut(s) 135
EcoRII CCWGG 3 cut(s) 56, 546, 1265
EcoT14I CCWWGG 3 cut(s) 533, 969, 1250
EcoT38I GRGCYC 4 cut(s) 138, 564, 594, 860
ErhI CCWWGG 3 cut(s) 533, 969, 1250
FaeI CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1254, 1350
FaqI GGGAC 2 cut(s) 464, 628
FatI CATG 8 cut(s) 216, 306, 384, 474, 483, 502, 1250, 1346
FauNDI CATATG 1 cut(s) 497
FokI GGATG 4 cut(s) 129, 333, 596, 719
FriOI GRGCYC 4 cut(s) 138, 564, 594, 860
FspBI CTAG 3 cut(s) 410, 923, 1044
GlaI GCGC 3 cut(s) 200, 621, 1099
GsuI CTGGAG 2 cut(s) 530, 1326
HaeII RGCGCY 1 cut(s) 1101
HaeIII GGCC 2 cut(s) 136, 836
HapII CCGG 2 cut(s) 655, 837
HgaI GACGC 2 cut(s) 15, 52
HhaI GCGC 3 cut(s) 201, 622, 1100
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1254, 1350
Hin6I GCGC 3 cut(s) 199, 620, 1098
HinP1I GCGC 3 cut(s) 199, 620, 1098
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HindIII AAGCTT 2 cut(s) 50, 1127
HinfI GANTC 6 cut(s) 529, 846, 913, 944, 1170, 1291
HpaI GTTAAC 1 cut(s) 939
HpaII CCGG 2 cut(s) 655, 837
HphI GGTGA 3 cut(s) 556, 607, 1288
Hpy166II GTNNAC 2 cut(s) 721, 939
Hpy188III TCNNGA 7 cut(s) 77, 332, 665, 674, 728, 923, 955
Hpy8I GTNNAC 2 cut(s) 721, 939
Hpy99I CGWCG 2 cut(s) 31, 46
HpyAV CCTTC 4 cut(s) 215, 769, 1180, 1295
HpyCH4III ACNGT 3 cut(s) 568, 642, 1144
HpyCH4IV ACGT 3 cut(s) 99, 552, 1084
HpyCH4V TGCA 6 cut(s) 63, 344, 483, 794, 1306, 1313
HpyF3I CTNAG 8 cut(s) 312, 517, 588, 623, 683, 831, 1094, 1113
HpySE526I ACGT 3 cut(s) 99, 552, 1084
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1254, 1350
HspAI GCGC 3 cut(s) 199, 620, 1098
KroI GCCGGC 1 cut(s) 836
KroNI GCCGGC 1 cut(s) 838
KspAI GTTAAC 1 cut(s) 939
Kzo9I GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
LmnI GCTCC 2 cut(s) 863, 973
LweI GCATC 5 cut(s) 72, 263, 781, 928, 1211
MaeI CTAG 3 cut(s) 410, 923, 1044
MaeII ACGT 3 cut(s) 99, 552, 1084
MaeIII GTNAC 3 cut(s) 225, 1085, 1232
MalI GATC 8 cut(s) 260, 288, 357, 669, 678, 732, 965, 1248
MboI GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
MboII GAAGA 3 cut(s) 43, 58, 1111
MflI RGATCY 1 cut(s) 1246
MhlI GDGCHC 5 cut(s) 138, 564, 594, 609, 860
MluCI AATT 6 cut(s) 161, 274, 694, 927, 1058, 1077
MlyI GAGTC 1 cut(s) 1164
MroNI GCCGGC 1 cut(s) 836
MroXI GAANNNNTTC 1 cut(s) 782
MseI TTAA 2 cut(s) 456, 938
MspI CCGG 2 cut(s) 655, 837
MspR9I CCNGG 3 cut(s) 58, 548, 1267
Mva1269I GAATGC 1 cut(s) 896
MvaI CCWGG 3 cut(s) 58, 548, 1267
MvnI CGCG 2 cut(s) 201, 620
NaeI GCCGGC 1 cut(s) 838
NcoI CCATGG 1 cut(s) 1250
NdeI CATATG 1 cut(s) 497
NdeII GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
NgoMIV GCCGGC 1 cut(s) 836
NlaIII CATG 8 cut(s) 220, 310, 388, 478, 487, 506, 1254, 1350
NlaIV GGNNCC 2 cut(s) 136, 959
NmuCI GTSAC 1 cut(s) 225
NspI RCATGY 1 cut(s) 487
PaeR7I CTCGAG 1 cut(s) 1179
PctI GAATGC 1 cut(s) 896
PdiI GCCGGC 1 cut(s) 838
PdmI GAANNNNTTC 1 cut(s) 782
PfeI GAWTC 5 cut(s) 529, 846, 913, 944, 1291
PflMI CCANNNNNTGG 1 cut(s) 1266
PfoI TCCNGGA 2 cut(s) 546, 1265
PleI GAGTC 1 cut(s) 1164
PpsI GAGTC 1 cut(s) 1164
Ppu21I YACGTR 1 cut(s) 1085
PshBI ATTAAT 1 cut(s) 456
Psp124BI GAGCTC 2 cut(s) 564, 860
Psp6I CCWGG 3 cut(s) 56, 546, 1265
PspGI CCWGG 3 cut(s) 56, 546, 1265
PspN4I GGNNCC 2 cut(s) 136, 959
PspOMI GGGCCC 1 cut(s) 134
PspPI GGNCC 3 cut(s) 134, 135, 718
PspXI VCTCGAGB 1 cut(s) 1179
PsrI GAACNNNNNNTAC 2 cut(s) 1225, 1257
PstNI CAGNNNCTG 1 cut(s) 821
PsuI RGATCY 1 cut(s) 1246
RsaI GTAC 6 cut(s) 102, 159, 414, 494, 801, 1177
RsaNI GTAC 6 cut(s) 101, 158, 413, 493, 800, 1176
SacI GAGCTC 2 cut(s) 564, 860
SaqAI TTAA 2 cut(s) 456, 938
Sau3AI GATC 8 cut(s) 258, 286, 355, 667, 676, 730, 963, 1246
Sau96I GGNCC 3 cut(s) 134, 135, 718
SchI GAGTC 1 cut(s) 1164
ScrFI CCNGG 3 cut(s) 58, 548, 1267
SduI GDGCHC 5 cut(s) 138, 564, 594, 609, 860
SfaNI GCATC 5 cut(s) 72, 263, 781, 928, 1211
Sfr274I CTCGAG 1 cut(s) 1179
SinI GGWCC 1 cut(s) 718
SlaI CTCGAG 1 cut(s) 1179
SmlI CTYRAG 1 cut(s) 1179
SmoI CTYRAG 1 cut(s) 1179
SnaBI TACGTA 1 cut(s) 1085
Sse9I AATT 6 cut(s) 161, 274, 694, 927, 1058, 1077
SsiI CCGC 4 cut(s) 88, 618, 917, 1299
SspI AATATT 1 cut(s) 420
SspMI CTAG 3 cut(s) 410, 923, 1044
SstI GAGCTC 2 cut(s) 564, 860
StyD4I CCNGG 3 cut(s) 56, 546, 1265
StyI CCWWGG 3 cut(s) 533, 969, 1250
TaaI ACNGT 3 cut(s) 568, 642, 1144
TaiI ACGT 3 cut(s) 102, 555, 1087
TaqI TCGA 7 cut(s) 29, 41, 257, 729, 947, 1180, 1205
TasI AATT 6 cut(s) 161, 274, 694, 927, 1058, 1077
TatI WGTACW 4 cut(s) 157, 412, 492, 1175
TfiI GAWTC 5 cut(s) 529, 846, 913, 944, 1291
Tru1I TTAA 2 cut(s) 456, 938
Tru9I TTAA 2 cut(s) 456, 938
TscAI CASTG 1 cut(s) 769
TseFI GTSAC 1 cut(s) 225
Tsp45I GTSAC 1 cut(s) 225
TspDTI ATGAA 3 cut(s) 380, 723, 896
TspRI CASTG 1 cut(s) 769
Van91I CCANNNNNTGG 1 cut(s) 1266
VpaK11BI GGWCC 1 cut(s) 718
VspI ATTAAT 1 cut(s) 456
XapI RAATTY 1 cut(s) 1058
XbaI TCTAGA 1 cut(s) 922
XceI RCATGY 1 cut(s) 487
XhoI CTCGAG 1 cut(s) 1179
XmnI GAANNNNTTC 1 cut(s) 782
XspI CTAG 3 cut(s) 410, 923, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.