Rmu_sc0010642.1_g000012

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010642.1
OG0000188
Physical Location & Seq
Forward (+)
27692 .. 30280
2589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010642.1_g000012.1.cds

Sequence Viewer

Length: 1761 bp
atgggaggtagcagtgatatagaaaagggtgaagtggatgaaaccgttccagttcatgatctagaacgtaaaggtatgactgttgaagaaaggaaaagaaccttctatacaaagcttttgggggccaaatcacctttgcctgtttcgtgttgcatcttcaaagttcccgaggtgctacgaagacaaaaaaaggaggcatacgcacctgacgtagtctcaatcgggccctttcatcgaggtgctaaaaaattacaactcgtggaaaatgtgaaaaagtggtatttaaaatgtcttctcgcgcgcctgctcccgaacccgacaggattgagctttaaggacttgcttgaaagcatgagcctagatagcttgactgaaagtatggagaggtgggctgaaatgatcaagggagaggaactggataaacgcgcccggggttgttattcagatccatgcaatcatcttgaccaaaacaacttcatagatatgctcatactcgatggttgtttcttgatagaattatttcggaaggcatttgattcatcacgacaagataatgacgaccctattttcaacgtgccttgtatgctcgaatatctataccatgatcttctgttactcgaaaatcagctgccctggtttgtgctcgagtttttctataagctaattgagggtggcaacgctaactctctcgataatttggtattcgagttcttcaaaaattcagtggctgatgacaaaattttgaggaaccccgatcccgagtcttctggtaagattcttcacatacttgatctgattagaactgccctcgttggtatccccgattcaaattctacctccctatcaaacatccacccgccccaactgccgcaaaggatacctaatgctactactctttcagaggcaggcgttatatttaaaaagtccactgaaagttgcatattgaaaataacgttcaacaatggcgtcttcaccattcctcctctggctatcgatgagagtacaggtcctttgttcaggaaccttatggccttcgagcagtgttatcacagttgcaagcacaagataacatcctatgcggttttgatggatagcctcatcgatacgaacaaggatgtggatcttctatgtgaggaagagataatagccaactggttgagtgctgatgatgcttcgaagttcttcaacgatctatatactgacaccacaagcttggctgaaaggatcaatggagaggaactggataaactcgcccgggatcgttattcagacccatgcaatcatcttgaccaaaacgacttcatagagatgctcatactcgatggttgtttcttgatagaactatatcggaaggcaccggttccagcacgacaagataatgacgaccctatttccatcgtgccttgtatgctcgaatacctataccatgatcttctgttactagaaaatcagctgccttggtttgtgctcgagtttttcaataagctaattgcgagtggttcgaaggctacctccaaatcaaacaaccacatgccgcaaaggatacctagtgctgctactctttcagaggcaggcgttatatttaaaaggggtaaagaaggttgcatattaaacataacgttcaaaggtgccgtttttaccattcctcctcttgctatcgatgagaggacatgtccttttgtccaggaaccttatggccttcgagcagtgttatcacagttgcgcgcacatgatcacatcctacgcggttttgatggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

586

Amino Acids

66.41

Weight (kDa)

5.12

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1354, 1628
AccII CGCG 5 cut(s) 299, 301, 426, 1725, 1746
AciI CCGC 5 cut(s) 857, 869, 1079, 1535, 1746
AclI AACGTT 2 cut(s) 953, 1619
AclWI GGATC 5 cut(s) 440, 749, 1128, 1232, 1266
AcsI RAATTY 3 cut(s) 718, 738, 829
AcyI GRCGYC 1 cut(s) 966
AfaI GTAC 1 cut(s) 1003
AflIII ACRYGT 1 cut(s) 1670
AgeI ACCGGT 1 cut(s) 1357
AjnI CCWGG 2 cut(s) 632, 1683
AluBI AGCT 8 cut(s) 115, 330, 366, 628, 661, 1212, 1453, 1486
AluI AGCT 8 cut(s) 115, 330, 366, 628, 661, 1212, 1453, 1486
Alw21I GWGCWC 2 cut(s) 645, 1470
Alw26I GTCTC 1 cut(s) 220
AlwI GGATC 5 cut(s) 440, 749, 1128, 1232, 1266
AlwNI CAGNNNCTG 1 cut(s) 728
Ama87I CYCGRG 6 cut(s) 167, 429, 644, 758, 1254, 1469
AoxI GGCC 4 cut(s) 123, 224, 1029, 1696
ApaI GGGCCC 1 cut(s) 228
ApeKI GCWGC 3 cut(s) 628, 1453, 1553
ApoI RAATTY 3 cut(s) 718, 738, 829
AsiGI ACCGGT 1 cut(s) 1357
Asp700I GAANNNNTTC 3 cut(s) 45, 519, 1181
AspLEI GCGC 5 cut(s) 301, 303, 428, 1725, 1727
AspS9I GGNCC 4 cut(s) 123, 224, 225, 1007
AsuC2I CCSGG 4 cut(s) 430, 431, 1255, 1256
AsuHPI GGTGA 3 cut(s) 41, 123, 964
AsuII TTCGAA 2 cut(s) 1175, 1502
AvaI CYCGRG 6 cut(s) 167, 429, 644, 758, 1254, 1469
AvaII GGWCC 1 cut(s) 1007
BaeGI GKGCMC 1 cut(s) 228
BanI GGYRCC 2 cut(s) 1354, 1628
BanII GRGCYC 1 cut(s) 228
BauI CACGAG 1 cut(s) 257
BbsI GAAGAC 4 cut(s) 187, 284, 756, 961
Bbv12I GWGCWC 2 cut(s) 645, 1470
BbvI GCAGC 3 cut(s) 615, 1440, 1540
BccI CCATC 5 cut(s) 491, 1081, 1316, 1403, 1748
BceAI ACGGC 1 cut(s) 1616
BciT130I CCWGG 2 cut(s) 634, 1685
BciVI GTATCC 3 cut(s) 827, 870, 1536
BclI TGATCA 2 cut(s) 399, 1732
BcnI CCSGG 4 cut(s) 430, 431, 1255, 1256
BcoDI GTCTC 1 cut(s) 220
BfaI CTAG 4 cut(s) 62, 359, 1442, 1548
BfuI GTATCC 3 cut(s) 827, 870, 1536
BisI GCNGC 5 cut(s) 629, 869, 1454, 1535, 1554
BlsI GCNGC 5 cut(s) 630, 870, 1455, 1536, 1555
Bme1390I CCNGG 6 cut(s) 430, 431, 634, 1255, 1256, 1685
Bme18I GGWCC 1 cut(s) 1007
BmeT110I CYCGRG 6 cut(s) 167, 429, 644, 758, 1254, 1469
BmgT120I GGNCC 4 cut(s) 123, 224, 225, 1007
BmiI GGNNCC 8 cut(s) 124, 226, 749, 1022, 1356, 1362, 1630, 1689
BmrFI CCNGG 6 cut(s) 430, 431, 634, 1255, 1256, 1685
BmsI GCATC 3 cut(s) 162, 1159, 1299
BpiI GAAGAC 4 cut(s) 187, 284, 756, 961
Bpu14I TTCGAA 2 cut(s) 1175, 1502
BpuMI CCSGG 4 cut(s) 430, 431, 1255, 1256
Bsa29I ATCGAT 3 cut(s) 993, 1101, 1659
BsaBI GATNNNNATC 1 cut(s) 1119
BsaHI GRCGYC 1 cut(s) 966
BsaJI CCNNGG 6 cut(s) 168, 429, 430, 632, 1254, 1457
BsaWI WCCGGW 1 cut(s) 1357
BsaXI ACNNNNNCTCC 4 cut(s) 964, 994, 1630, 1660
Bse118I RCCGGY 1 cut(s) 1357
Bse1I ACTGG 4 cut(s) 50, 420, 1157, 1245
Bse8I GATNNNNATC 1 cut(s) 1119
BseBI CCWGG 2 cut(s) 634, 1685
BseCI ATCGAT 3 cut(s) 993, 1101, 1659
BseDI CCNNGG 6 cut(s) 168, 429, 430, 632, 1254, 1457
BseGI GGATG 5 cut(s) 43, 849, 1070, 1120, 1737
BseJI GATNNNNATC 1 cut(s) 1119
BseNI ACTGG 4 cut(s) 50, 420, 1157, 1245
BsePI GCGCGC 2 cut(s) 299, 1723
BseRI GAGGAG 2 cut(s) 972, 1638
BseSI GKGCMC 1 cut(s) 228
BseXI GCAGC 3 cut(s) 615, 1440, 1540
Bsh1236I CGCG 5 cut(s) 299, 301, 426, 1725, 1746
BshFI GGCC 4 cut(s) 125, 226, 1031, 1698
BshNI GGYRCC 2 cut(s) 1354, 1628
BshTI ACCGGT 1 cut(s) 1357
BshVI ATCGAT 3 cut(s) 993, 1101, 1659
BsiHKAI GWGCWC 2 cut(s) 645, 1470
BsiHKCI CYCGRG 6 cut(s) 167, 429, 644, 758, 1254, 1469
BsiSI CCGG 3 cut(s) 430, 1255, 1358
BsmAI GTCTC 1 cut(s) 220
BsnI GGCC 4 cut(s) 125, 226, 1031, 1698
BsoBI CYCGRG 6 cut(s) 167, 429, 644, 758, 1254, 1469
Bsp119I TTCGAA 2 cut(s) 1175, 1502
Bsp120I GGGCCC 1 cut(s) 224
Bsp1286I GDGCHC 3 cut(s) 228, 645, 1470
BspACI CCGC 5 cut(s) 857, 869, 1079, 1535, 1746
BspANI GGCC 4 cut(s) 125, 226, 1031, 1698
BspDI ATCGAT 3 cut(s) 993, 1101, 1659
BspFNI CGCG 5 cut(s) 299, 301, 426, 1725, 1746
BspHI TCATGA 1 cut(s) 55
BspLI GGNNCC 8 cut(s) 124, 226, 749, 1022, 1356, 1362, 1630, 1689
BspPI GGATC 5 cut(s) 440, 749, 1128, 1232, 1266
BspT104I TTCGAA 2 cut(s) 1175, 1502
BspT107I GGYRCC 2 cut(s) 1354, 1628
BsrFI RCCGGY 1 cut(s) 1357
BsrI ACTGG 4 cut(s) 50, 420, 1157, 1245
BssAI RCCGGY 1 cut(s) 1357
BssECI CCNNGG 6 cut(s) 168, 429, 430, 632, 1254, 1457
BssHII GCGCGC 2 cut(s) 299, 1723
BssNI GRCGYC 1 cut(s) 966
BssSI CACGAG 1 cut(s) 257
BssT1I CCWWGG 1 cut(s) 1457
Bst2BI CACGAG 1 cut(s) 257
Bst2UI CCWGG 2 cut(s) 634, 1685
Bst4CI ACNGT 4 cut(s) 46, 82, 1052, 1719
Bst6I CTCTTC 1 cut(s) 1131
BstACI GRCGYC 1 cut(s) 966
BstBI TTCGAA 2 cut(s) 1175, 1502
BstC8I GCNNGC 6 cut(s) 301, 305, 907, 1058, 1573, 1725
BstF5I GGATG 5 cut(s) 43, 849, 1070, 1120, 1737
BstFNI CGCG 5 cut(s) 299, 301, 426, 1725, 1746
BstHHI GCGC 5 cut(s) 301, 303, 428, 1725, 1727
BstMAI GTCTC 1 cut(s) 220
BstMWI GCNNNNNNNGC 5 cut(s) 363, 583, 865, 1169, 1408
BstNI CCWGG 2 cut(s) 634, 1685
BstNSI RCATGY 2 cut(s) 1534, 1674
BstSCI CCNGG 6 cut(s) 428, 429, 632, 1253, 1254, 1683
BstSLI GKGCMC 1 cut(s) 228
BstUI CGCG 5 cut(s) 299, 301, 426, 1725, 1746
BstV1I GCAGC 3 cut(s) 615, 1440, 1540
BstV2I GAAGAC 4 cut(s) 187, 284, 756, 961
BstX2I RGATCY 2 cut(s) 445, 1120
BstXI CCANNNNNNTGG 1 cut(s) 1213
BstYI RGATCY 2 cut(s) 445, 1120
Bsu15I ATCGAT 3 cut(s) 993, 1101, 1659
BsuI GTATCC 3 cut(s) 827, 870, 1536
BsuRI GGCC 4 cut(s) 125, 226, 1031, 1698
BsuTUI ATCGAT 3 cut(s) 993, 1101, 1659
BtsCI GGATG 5 cut(s) 43, 849, 1070, 1120, 1737
BtsI GCAGTG 3 cut(s) 19, 1046, 1713
BtsIMutI CAGTG 5 cut(s) 19, 729, 927, 1046, 1713
Cac8I GCNNGC 6 cut(s) 301, 305, 907, 1058, 1573, 1725
CaiI CAGNNNCTG 1 cut(s) 728
CciI TCATGA 1 cut(s) 55
CfoI GCGC 5 cut(s) 301, 303, 428, 1725, 1727
Cfr10I RCCGGY 1 cut(s) 1357
Cfr13I GGNCC 4 cut(s) 123, 224, 225, 1007
Cfr9I CCCGGG 2 cut(s) 429, 1254
ClaI ATCGAT 3 cut(s) 993, 1101, 1659
CseI GACGC 1 cut(s) 955
Csp6I GTAC 1 cut(s) 1002
CspAI ACCGGT 1 cut(s) 1357
CviAII CATG 9 cut(s) 56, 352, 450, 602, 1275, 1427, 1531, 1671, 1730
CviQI GTAC 1 cut(s) 1002
DraI TTTAAA 3 cut(s) 285, 919, 1585
Eam1104I CTCTTC 1 cut(s) 1131
EarI CTCTTC 1 cut(s) 1131
Eco130I CCWWGG 1 cut(s) 1457
Eco24I GRGCYC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 1007
Eco88I CYCGRG 6 cut(s) 167, 429, 644, 758, 1254, 1469
EcoO109I RGGNCCY 2 cut(s) 225, 1007
EcoRII CCWGG 2 cut(s) 632, 1683
EcoT14I CCWWGG 1 cut(s) 1457
EcoT38I GRGCYC 1 cut(s) 228
ErhI CCWWGG 1 cut(s) 1457
FaeI CATG 9 cut(s) 59, 355, 453, 605, 1278, 1430, 1534, 1674, 1733
FatI CATG 9 cut(s) 55, 351, 449, 601, 1274, 1426, 1530, 1670, 1729
FauI CCCGC 1 cut(s) 864
FbaI TGATCA 2 cut(s) 399, 1732
Fnu4HI GCNGC 5 cut(s) 629, 869, 1454, 1535, 1554
FokI GGATG 5 cut(s) 50, 836, 1057, 1127, 1724
FriOI GRGCYC 1 cut(s) 228
Fsp4HI GCNGC 5 cut(s) 629, 869, 1454, 1535, 1554
FspBI CTAG 4 cut(s) 62, 359, 1442, 1548
GlaI GCGC 5 cut(s) 300, 302, 427, 1724, 1726
GluI GCNGC 5 cut(s) 629, 869, 1454, 1535, 1554
HaeIII GGCC 4 cut(s) 125, 226, 1031, 1698
HapII CCGG 3 cut(s) 430, 1255, 1358
HgaI GACGC 1 cut(s) 955
HhaI GCGC 5 cut(s) 301, 303, 428, 1725, 1727
Hin1I GRCGYC 1 cut(s) 966
Hin1II CATG 9 cut(s) 59, 355, 453, 605, 1278, 1430, 1534, 1674, 1733
Hin6I GCGC 5 cut(s) 299, 301, 426, 1723, 1725
HinP1I GCGC 5 cut(s) 299, 301, 426, 1723, 1725
HindIII AAGCTT 2 cut(s) 113, 1210
HinfI GANTC 4 cut(s) 536, 761, 775, 824
HpaII CCGG 3 cut(s) 430, 1255, 1358
HphI GGTGA 3 cut(s) 41, 123, 964
Hpy166II GTNNAC 1 cut(s) 927
Hpy188I TCNGA 7 cut(s) 445, 525, 795, 901, 1270, 1350, 1567
Hpy8I GTNNAC 1 cut(s) 927
HpyAV CCTTC 7 cut(s) 112, 520, 1042, 1345, 1498, 1592, 1709
HpyCH4III ACNGT 4 cut(s) 46, 82, 1052, 1719
HpyCH4IV ACGT 5 cut(s) 67, 210, 573, 953, 1619
HpyCH4V TGCA 6 cut(s) 153, 453, 939, 1056, 1278, 1605
HpyF10VI GCNNNNNNNGC 5 cut(s) 363, 583, 865, 1169, 1408
HpySE526I ACGT 5 cut(s) 67, 210, 573, 953, 1619
Hsp92I GRCGYC 1 cut(s) 966
Hsp92II CATG 9 cut(s) 59, 355, 453, 605, 1278, 1430, 1534, 1674, 1733
HspAI GCGC 5 cut(s) 299, 301, 426, 1723, 1725
Ksp22I TGATCA 2 cut(s) 399, 1732
LmnI GCTCC 1 cut(s) 312
Lsp1109I GCAGC 3 cut(s) 615, 1440, 1540
LweI GCATC 3 cut(s) 162, 1159, 1299
MaeI CTAG 4 cut(s) 62, 359, 1442, 1548
MaeII ACGT 5 cut(s) 67, 210, 573, 953, 1619
MaeIII GTNAC 2 cut(s) 612, 1437
MflI RGATCY 2 cut(s) 445, 1120
MhlI GDGCHC 3 cut(s) 228, 645, 1470
MluCI AATT 8 cut(s) 248, 515, 663, 694, 718, 738, 829, 1488
MlyI GAGTC 1 cut(s) 770
MroXI GAANNNNTTC 3 cut(s) 45, 519, 1181
MseI TTAA 5 cut(s) 284, 333, 918, 1584, 1610
MslI CAYNNNNRTG 3 cut(s) 237, 482, 1307
MspA1I CMGCKG 2 cut(s) 628, 1453
MspI CCGG 3 cut(s) 430, 1255, 1358
MspR9I CCNGG 6 cut(s) 430, 431, 634, 1255, 1256, 1685
MvaI CCWGG 2 cut(s) 634, 1685
MvnI CGCG 5 cut(s) 299, 301, 426, 1725, 1746
MwoI GCNNNNNNNGC 5 cut(s) 363, 583, 865, 1169, 1408
NciI CCSGG 4 cut(s) 430, 431, 1255, 1256
NlaIII CATG 9 cut(s) 59, 355, 453, 605, 1278, 1430, 1534, 1674, 1733
NlaIV GGNNCC 8 cut(s) 124, 226, 749, 1022, 1356, 1362, 1630, 1689
NspI RCATGY 2 cut(s) 1534, 1674
NspV TTCGAA 2 cut(s) 1175, 1502
PaeR7I CTCGAG 2 cut(s) 644, 1469
PagI TCATGA 1 cut(s) 55
PauI GCGCGC 2 cut(s) 299, 1723
PciI ACATGT 1 cut(s) 1670
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PdmI GAANNNNTTC 3 cut(s) 45, 519, 1181
PfeI GAWTC 3 cut(s) 536, 775, 824
PflFI GACNNNGTC 1 cut(s) 212
PfoI TCCNGGA 1 cut(s) 1683
PinAI ACCGGT 1 cut(s) 1357
PkrI GCNGC 5 cut(s) 630, 870, 1455, 1536, 1555
PleI GAGTC 1 cut(s) 769
PpsI GAGTC 1 cut(s) 769
PpuMI RGGWCCY 1 cut(s) 1007
PscI ACATGT 1 cut(s) 1670
Psp1406I AACGTT 2 cut(s) 953, 1619
Psp5II RGGWCCY 1 cut(s) 1007
Psp6I CCWGG 2 cut(s) 632, 1683
PspGI CCWGG 2 cut(s) 632, 1683
PspN4I GGNNCC 8 cut(s) 124, 226, 749, 1022, 1356, 1362, 1630, 1689
PspOMI GGGCCC 1 cut(s) 224
PspPI GGNCC 4 cut(s) 123, 224, 225, 1007
PspPPI RGGWCCY 1 cut(s) 1007
PspXI VCTCGAGB 2 cut(s) 644, 1469
PsrI GAACNNNNNNTAC 2 cut(s) 91, 123
PstNI CAGNNNCTG 1 cut(s) 728
PsuI RGATCY 2 cut(s) 445, 1120
PsyI GACNNNGTC 1 cut(s) 212
PteI GCGCGC 2 cut(s) 299, 1723
PvuII CAGCTG 2 cut(s) 628, 1453
RsaI GTAC 1 cut(s) 1003
RsaNI GTAC 1 cut(s) 1002
RseI CAYNNNNRTG 3 cut(s) 237, 482, 1307
SaqAI TTAA 5 cut(s) 284, 333, 918, 1584, 1610
SatI GCNGC 5 cut(s) 629, 869, 1454, 1535, 1554
Sau96I GGNCC 4 cut(s) 123, 224, 225, 1007
SchI GAGTC 1 cut(s) 770
ScrFI CCNGG 6 cut(s) 430, 431, 634, 1255, 1256, 1685
SduI GDGCHC 3 cut(s) 228, 645, 1470
SfaNI GCATC 3 cut(s) 162, 1159, 1299
Sfr274I CTCGAG 2 cut(s) 644, 1469
SfuI TTCGAA 2 cut(s) 1175, 1502
SinI GGWCC 1 cut(s) 1007
SlaI CTCGAG 2 cut(s) 644, 1469
SmaI CCCGGG 2 cut(s) 431, 1256
SmiMI CAYNNNNRTG 3 cut(s) 237, 482, 1307
SmlI CTYRAG 2 cut(s) 644, 1469
SmoI CTYRAG 2 cut(s) 644, 1469
Sse9I AATT 8 cut(s) 248, 515, 663, 694, 718, 738, 829, 1488
SsiI CCGC 5 cut(s) 857, 869, 1079, 1535, 1746
SspMI CTAG 4 cut(s) 62, 359, 1442, 1548
StyD4I CCNGG 6 cut(s) 428, 429, 632, 1253, 1254, 1683
StyI CCWWGG 1 cut(s) 1457
TaaI ACNGT 4 cut(s) 46, 82, 1052, 1719
TaiI ACGT 5 cut(s) 70, 213, 576, 956, 1622
TasI AATT 8 cut(s) 248, 515, 663, 694, 718, 738, 829, 1488
TatI WGTACW 1 cut(s) 1001
TauI GCSGC 2 cut(s) 871, 1537
TfiI GAWTC 3 cut(s) 536, 775, 824
Tru1I TTAA 5 cut(s) 284, 333, 918, 1584, 1610
Tru9I TTAA 5 cut(s) 284, 333, 918, 1584, 1610
TscAI CASTG 5 cut(s) 19, 729, 934, 1046, 1713
TseI GCWGC 3 cut(s) 628, 1453, 1553
TspDTI ATGAA 6 cut(s) 44, 54, 221, 466, 528, 1291
TspMI CCCGGG 2 cut(s) 429, 1254
TspRI CASTG 5 cut(s) 19, 729, 934, 1046, 1713
Tth111I GACNNNGTC 1 cut(s) 212
VpaK11BI GGWCC 1 cut(s) 1007
XapI RAATTY 3 cut(s) 718, 738, 829
XbaI TCTAGA 1 cut(s) 61
XceI RCATGY 2 cut(s) 1534, 1674
XcmI CCANNNNNNNNNTGG 2 cut(s) 982, 1691
XhoI CTCGAG 2 cut(s) 644, 1469
XmaI CCCGGG 2 cut(s) 429, 1254
XmnI GAANNNNTTC 3 cut(s) 45, 519, 1181
XspI CTAG 4 cut(s) 62, 359, 1442, 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.