Rmu_sc0001323.1_g000018

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001323.1
OG0000188
Physical Location & Seq
Forward (+)
67171 .. 68550
1380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001323.1_g000018.1.cds

Sequence Viewer

Length: 1380 bp
atggaaggtagcagtgatatagaaaagtgtcaagtggataaaagcgttccagttcatctagatggtagaggtatgactgacatatgtaaaagaacctgcttcactgaagagcttttggaggcccaatcacctttgacttgttcatgtagcatattcagagttccccaggtgctacgaagacgaaaagtgaaggcatacaaacctgacatagtctcaatcgggccccttcaccgaggtgctgacgaagaatttcaaatcgtggaaaatgtgaaaaaatggtatttaaaatgttttctcgtgcgccagcaaccgaacccgacaggactgagtatgtcggacgtggagacgttgactgaagagatcaagggacaggaactggataaacgcgcccggcattgttatccagaccgatgcaatcatcttgaccaaaacgacttcatacagatgctcatactcgatggttgtttcttgatagaattatttcggaaggcacaatcggtaatgcgacaagacaatgacgaccctattttcaacgtgccttatatgctcgaatatttataccacgatcttctgttactcgaaaatcagcttccctggtttgtgctcgagtttttctataatctaattgagagtggcaacactaactctctcagtaaattggtattagacttcttcaaaaattcagtggctgatgccgaaattttgaggaaccccgatcccaactcttctggtatgattcttcacatacttgattttattagaactgccctcgttccaaccccaagtttgacagctgcccacgaacgagacaaccacctcccgcaaaggatacctagtgtcactgctctttcagacgtaggagttaaatttaaaaagggccgcccaggttgcatattcgacataacgttcaaaggtggcgttttcaccattcctcctctggctatcaatgagaggactggtcatttgttcagtaaccttatggccttcgagctgtgctatcacagttgcacgcacaagataatatcctatgcggtcttgatgacttacctcatcgatacgaaaaatgatgcggatcttctaagtgaggaaaatatagtagccaacttggatgatatcgatgcttcaaagttcttcaaagatctaaccaatgacaccagagtcattgattttgtctacgagggactctgcgaagaagtgcataaatatctcaaagctccacagaacaggataccatggaacaagtggagcaagaaattgagacgtgattattttgagacaccatggtctactatctctttttttgctgcttttgttctcctggtcctaaccttcttgcagaccgtatacacagtccagcaatactatcattctcccaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

459

Amino Acids

52.95

Weight (kDa)

5.76

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1157, 1282
Acc36I ACCTGC 1 cut(s) 104
AccI GTMKAC 3 cut(s) 1173, 1286, 1344
AccII CGCG 1 cut(s) 387
AciI CCGC 4 cut(s) 821, 880, 1031, 1070
AclI AACGTT 1 cut(s) 905
AclWI GGATC 2 cut(s) 710, 1080
AcsI RAATTY 4 cut(s) 248, 679, 699, 866
AcuI CTGAAG 2 cut(s) 126, 375
AgsI TTSAA 6 cut(s) 254, 532, 676, 910, 1125, 1135
AjiI CACGTC 2 cut(s) 340, 1262
AjnI CCWGG 4 cut(s) 165, 593, 883, 1317
AleI CACNNNNGTG 1 cut(s) 234
AluBI AGCT 5 cut(s) 112, 589, 794, 991, 1214
AluI AGCT 5 cut(s) 112, 589, 794, 991, 1214
Alw21I GWGCWC 1 cut(s) 606
Alw26I GTCTC 5 cut(s) 217, 338, 801, 1252, 1268
AlwI GGATC 2 cut(s) 710, 1080
AlwNI CAGNNNCTG 2 cut(s) 376, 689
Ama87I CYCGRG 1 cut(s) 605
AoxI GGCC 4 cut(s) 120, 221, 877, 981
ApaI GGGCCC 1 cut(s) 225
ApeKI GCWGC 2 cut(s) 794, 1304
ApoI RAATTY 4 cut(s) 248, 679, 699, 866
ArsI GACNNNNNNTTYG 2 cut(s) 946, 978
Asp700I GAANNNNTTC 2 cut(s) 249, 480
AspLEI GCGC 2 cut(s) 303, 389
AspS9I GGNCC 5 cut(s) 121, 221, 222, 877, 1321
AsuC2I CCSGG 1 cut(s) 391
AsuHPI GGTGA 3 cut(s) 120, 221, 916
AvaI CYCGRG 1 cut(s) 605
AvaII GGWCC 1 cut(s) 1321
BaeGI GKGCMC 1 cut(s) 225
BanII GRGCYC 1 cut(s) 225
BauI CACGAG 1 cut(s) 296
BbsI GAAGAC 1 cut(s) 184
Bbv12I GWGCWC 1 cut(s) 606
BbvI GCAGC 2 cut(s) 781, 1291
BccI CCATC 2 cut(s) 56, 452
BciT130I CCWGG 4 cut(s) 167, 595, 885, 1319
BciVI GTATCC 2 cut(s) 822, 1221
BcnI CCSGG 1 cut(s) 391
BcoDI GTCTC 5 cut(s) 217, 338, 801, 1252, 1268
BfaI CTAG 2 cut(s) 59, 834
BfuAI ACCTGC 1 cut(s) 104
BfuI GTATCC 2 cut(s) 822, 1221
BglII AGATCT 1 cut(s) 1138
BisI GCNGC 3 cut(s) 795, 880, 1305
BlsI GCNGC 3 cut(s) 796, 881, 1306
Bme1390I CCNGG 5 cut(s) 167, 391, 595, 885, 1319
Bme18I GGWCC 1 cut(s) 1321
BmeT110I CYCGRG 1 cut(s) 605
BmgBI CACGTC 2 cut(s) 340, 1262
BmgT120I GGNCC 5 cut(s) 121, 221, 222, 877, 1321
BmiI GGNNCC 3 cut(s) 223, 224, 710
BmrFI CCNGG 5 cut(s) 167, 391, 595, 885, 1319
BmsI GCATC 5 cut(s) 401, 435, 682, 1057, 1108
BpiI GAAGAC 1 cut(s) 184
BpuMI CCSGG 1 cut(s) 391
Bsa29I ATCGAT 2 cut(s) 1053, 1116
BsaBI GATNNNNATC 1 cut(s) 1071
BsaJI CCNNGG 6 cut(s) 165, 232, 593, 883, 1232, 1280
BsaXI ACNNNNNCTCC 2 cut(s) 916, 946
Bse1I ACTGG 3 cut(s) 50, 381, 961
Bse8I GATNNNNATC 1 cut(s) 1071
BseBI CCWGG 4 cut(s) 167, 595, 885, 1319
BseCI ATCGAT 2 cut(s) 1053, 1116
BseDI CCNNGG 6 cut(s) 165, 232, 593, 883, 1232, 1280
BseGI GGATG 1 cut(s) 1114
BseJI GATNNNNATC 1 cut(s) 1071
BseMII CTCAG 2 cut(s) 317, 664
BseNI ACTGG 3 cut(s) 50, 381, 961
BseRI GAGGAG 1 cut(s) 924
BseSI GKGCMC 1 cut(s) 225
BseXI GCAGC 2 cut(s) 781, 1291
Bsh1236I CGCG 1 cut(s) 387
BshFI GGCC 4 cut(s) 122, 223, 879, 983
BshVI ATCGAT 2 cut(s) 1053, 1116
BsiHKAI GWGCWC 1 cut(s) 606
BsiHKCI CYCGRG 1 cut(s) 605
BsiSI CCGG 1 cut(s) 391
BslFI GGGAC 2 cut(s) 381, 1194
BsmAI GTCTC 5 cut(s) 217, 338, 801, 1252, 1268
BsmBI CGTCTC 2 cut(s) 338, 1252
BsmFI GGGAC 2 cut(s) 381, 1194
BsnI GGCC 4 cut(s) 122, 223, 879, 983
BsoBI CYCGRG 1 cut(s) 605
Bsp120I GGGCCC 1 cut(s) 221
Bsp1286I GDGCHC 2 cut(s) 225, 606
Bsp143I GATC 5 cut(s) 360, 565, 715, 1072, 1138
Bsp19I CCATGG 2 cut(s) 1232, 1280
BspACI CCGC 4 cut(s) 821, 880, 1031, 1070
BspANI GGCC 4 cut(s) 122, 223, 879, 983
BspCNI CTCAG 2 cut(s) 318, 663
BspDI ATCGAT 2 cut(s) 1053, 1116
BspFNI CGCG 1 cut(s) 387
BspLI GGNNCC 3 cut(s) 223, 224, 710
BspMI ACCTGC 1 cut(s) 104
BspPI GGATC 2 cut(s) 710, 1080
BspQI GCTCTTC 1 cut(s) 102
BsrI ACTGG 3 cut(s) 50, 381, 961
BssECI CCNNGG 6 cut(s) 165, 232, 593, 883, 1232, 1280
BssMI GATC 5 cut(s) 360, 565, 715, 1072, 1138
BssNAI GTATAC 1 cut(s) 1345
BssSI CACGAG 1 cut(s) 296
BssT1I CCWWGG 2 cut(s) 1232, 1280
Bst1107I GTATAC 1 cut(s) 1345
Bst2BI CACGAG 1 cut(s) 296
Bst2UI CCWGG 4 cut(s) 167, 595, 885, 1319
Bst4CI ACNGT 3 cut(s) 1004, 1342, 1351
Bst6I CTCTTC 3 cut(s) 102, 351, 730
BstC8I GCNNGC 2 cut(s) 305, 1010
BstDEI CTNAG 3 cut(s) 326, 650, 1079
BstDSI CCRYGG 2 cut(s) 1232, 1280
BstF5I GGATG 1 cut(s) 1114
BstFNI CGCG 1 cut(s) 387
BstHHI GCGC 2 cut(s) 303, 389
BstKTI GATC 5 cut(s) 363, 568, 718, 1075, 1141
BstMAI GTCTC 5 cut(s) 217, 338, 801, 1252, 1268
BstMBI GATC 5 cut(s) 360, 565, 715, 1072, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 544, 888
BstNI CCWGG 4 cut(s) 167, 595, 885, 1319
BstSCI CCNGG 5 cut(s) 165, 389, 593, 883, 1317
BstSLI GKGCMC 1 cut(s) 225
BstUI CGCG 1 cut(s) 387
BstV1I GCAGC 2 cut(s) 781, 1291
BstV2I GAAGAC 1 cut(s) 184
BstX2I RGATCY 2 cut(s) 1072, 1138
BstYI RGATCY 2 cut(s) 1072, 1138
BstZ17I GTATAC 1 cut(s) 1345
Bsu15I ATCGAT 2 cut(s) 1053, 1116
BsuI GTATCC 2 cut(s) 822, 1221
BsuRI GGCC 4 cut(s) 122, 223, 879, 983
BsuTUI ATCGAT 2 cut(s) 1053, 1116
BtgI CCRYGG 2 cut(s) 1232, 1280
BtrI CACGTC 2 cut(s) 340, 1262
BtsCI GGATG 1 cut(s) 1114
BtsI GCAGTG 2 cut(s) 19, 840
BtsIMutI CAGTG 4 cut(s) 19, 102, 690, 840
BveI ACCTGC 1 cut(s) 104
Cac8I GCNNGC 2 cut(s) 305, 1010
CaiI CAGNNNCTG 2 cut(s) 376, 689
CfoI GCGC 2 cut(s) 303, 389
Cfr13I GGNCC 5 cut(s) 121, 221, 222, 877, 1321
ClaI ATCGAT 2 cut(s) 1053, 1116
CviAII CATG 3 cut(s) 144, 1233, 1281
DdeI CTNAG 3 cut(s) 326, 650, 1079
DpnI GATC 5 cut(s) 362, 567, 717, 1074, 1140
DpnII GATC 5 cut(s) 360, 565, 715, 1072, 1138
DraI TTTAAA 2 cut(s) 285, 871
DrdI GACNNNNNNGTC 2 cut(s) 1157, 1282
DseDI GACNNNNNNGTC 2 cut(s) 1157, 1282
Eam1104I CTCTTC 3 cut(s) 102, 351, 730
EarI CTCTTC 3 cut(s) 102, 351, 730
Eco130I CCWWGG 2 cut(s) 1232, 1280
Eco24I GRGCYC 1 cut(s) 225
Eco32I GATATC 1 cut(s) 1114
Eco47I GGWCC 1 cut(s) 1321
Eco57I CTGAAG 2 cut(s) 126, 375
Eco88I CYCGRG 1 cut(s) 605
EcoO109I RGGNCCY 1 cut(s) 222
EcoRII CCWGG 4 cut(s) 165, 593, 883, 1317
EcoRV GATATC 1 cut(s) 1114
EcoT14I CCWWGG 2 cut(s) 1232, 1280
EcoT38I GRGCYC 1 cut(s) 225
ErhI CCWWGG 2 cut(s) 1232, 1280
Esp3I CGTCTC 2 cut(s) 338, 1252
FaeI CATG 3 cut(s) 147, 1236, 1284
FaqI GGGAC 2 cut(s) 381, 1194
FatI CATG 3 cut(s) 143, 1232, 1280
FauI CCCGC 1 cut(s) 828
FauNDI CATATG 1 cut(s) 83
FblI GTMKAC 3 cut(s) 1173, 1286, 1344
Fnu4HI GCNGC 3 cut(s) 795, 880, 1305
FokI GGATG 1 cut(s) 1121
FriOI GRGCYC 1 cut(s) 225
Fsp4HI GCNGC 3 cut(s) 795, 880, 1305
FspBI CTAG 2 cut(s) 59, 834
GlaI GCGC 2 cut(s) 302, 388
GluI GCNGC 3 cut(s) 795, 880, 1305
HaeIII GGCC 4 cut(s) 122, 223, 879, 983
HapII CCGG 1 cut(s) 391
HhaI GCGC 2 cut(s) 303, 389
Hin1II CATG 3 cut(s) 147, 1236, 1284
Hin6I GCGC 2 cut(s) 301, 387
HinP1I GCGC 2 cut(s) 301, 387
HincII GTYRAC 1 cut(s) 351
HindII GTYRAC 1 cut(s) 351
HinfI GANTC 3 cut(s) 736, 1158, 1182
HpaII CCGG 1 cut(s) 391
HphI GGTGA 3 cut(s) 120, 221, 916
Hpy166II GTNNAC 4 cut(s) 351, 1174, 1287, 1345
Hpy188I TCNGA 4 cut(s) 158, 337, 486, 853
Hpy188III TCNNGA 5 cut(s) 59, 404, 422, 469, 1036
Hpy8I GTNNAC 4 cut(s) 351, 1174, 1287, 1345
HpyAV CCTTC 5 cut(s) 184, 236, 481, 994, 1339
HpyCH4III ACNGT 3 cut(s) 1004, 1342, 1351
HpyCH4IV ACGT 6 cut(s) 339, 347, 534, 855, 905, 1261
HpyCH4V TGCA 5 cut(s) 414, 891, 1008, 1198, 1336
HpyF10VI GCNNNNNNNGC 2 cut(s) 544, 888
HpyF3I CTNAG 3 cut(s) 326, 650, 1079
HpySE526I ACGT 6 cut(s) 339, 347, 534, 855, 905, 1261
Hsp92II CATG 3 cut(s) 147, 1236, 1284
HspAI GCGC 2 cut(s) 301, 387
Kzo9I GATC 5 cut(s) 360, 565, 715, 1072, 1138
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 2 cut(s) 1219, 1245
Lsp1109I GCAGC 2 cut(s) 781, 1291
LweI GCATC 5 cut(s) 401, 435, 682, 1057, 1108
MaeI CTAG 2 cut(s) 59, 834
MaeII ACGT 6 cut(s) 339, 347, 534, 855, 905, 1261
MaeIII GTNAC 3 cut(s) 573, 838, 971
MalI GATC 5 cut(s) 362, 567, 717, 1074, 1140
MboI GATC 5 cut(s) 360, 565, 715, 1072, 1138
MflI RGATCY 2 cut(s) 1072, 1138
MhlI GDGCHC 2 cut(s) 225, 606
MluCI AATT 9 cut(s) 248, 476, 624, 656, 679, 699, 866, 1253, 1375
MlyI GAGTC 2 cut(s) 1167, 1176
MmeI TCCRAC 2 cut(s) 315, 800
MroXI GAANNNNTTC 2 cut(s) 249, 480
MseI TTAA 4 cut(s) 284, 864, 870, 1378
MslI CAYNNNNRTG 3 cut(s) 60, 234, 443
MspA1I CMGCKG 1 cut(s) 794
MspI CCGG 1 cut(s) 391
MspR9I CCNGG 5 cut(s) 167, 391, 595, 885, 1319
MvaI CCWGG 4 cut(s) 167, 595, 885, 1319
MvnI CGCG 1 cut(s) 387
MwoI GCNNNNNNNGC 2 cut(s) 544, 888
NciI CCSGG 1 cut(s) 391
NcoI CCATGG 2 cut(s) 1232, 1280
NdeI CATATG 1 cut(s) 83
NdeII GATC 5 cut(s) 360, 565, 715, 1072, 1138
NlaIII CATG 3 cut(s) 147, 1236, 1284
NlaIV GGNNCC 3 cut(s) 223, 224, 710
NmuCI GTSAC 1 cut(s) 838
OliI CACNNNNGTG 1 cut(s) 234
PaeR7I CTCGAG 1 cut(s) 605
PciSI GCTCTTC 1 cut(s) 102
PdmI GAANNNNTTC 2 cut(s) 249, 480
PfeI GAWTC 1 cut(s) 736
PflFI GACNNNGTC 1 cut(s) 209
PkrI GCNGC 3 cut(s) 796, 881, 1306
PleI GAGTC 2 cut(s) 1166, 1176
PpsI GAGTC 2 cut(s) 1166, 1176
Psp1406I AACGTT 1 cut(s) 905
Psp6I CCWGG 4 cut(s) 165, 593, 883, 1317
PspGI CCWGG 4 cut(s) 165, 593, 883, 1317
PspN4I GGNNCC 3 cut(s) 223, 224, 710
PspOMI GGGCCC 1 cut(s) 221
PspPI GGNCC 5 cut(s) 121, 221, 222, 877, 1321
PspXI VCTCGAGB 1 cut(s) 605
PstNI CAGNNNCTG 2 cut(s) 376, 689
PsuI RGATCY 2 cut(s) 1072, 1138
PsyI GACNNNGTC 1 cut(s) 209
PvuII CAGCTG 1 cut(s) 794
RseI CAYNNNNRTG 3 cut(s) 60, 234, 443
SapI GCTCTTC 1 cut(s) 102
SaqAI TTAA 4 cut(s) 284, 864, 870, 1378
SatI GCNGC 3 cut(s) 795, 880, 1305
Sau3AI GATC 5 cut(s) 360, 565, 715, 1072, 1138
Sau96I GGNCC 5 cut(s) 121, 221, 222, 877, 1321
SchI GAGTC 2 cut(s) 1167, 1176
ScrFI CCNGG 5 cut(s) 167, 391, 595, 885, 1319
SduI GDGCHC 2 cut(s) 225, 606
SfaNI GCATC 5 cut(s) 401, 435, 682, 1057, 1108
Sfr274I CTCGAG 1 cut(s) 605
SinI GGWCC 1 cut(s) 1321
SlaI CTCGAG 1 cut(s) 605
SmiMI CAYNNNNRTG 3 cut(s) 60, 234, 443
SmlI CTYRAG 1 cut(s) 605
SmoI CTYRAG 1 cut(s) 605
Sse9I AATT 9 cut(s) 248, 476, 624, 656, 679, 699, 866, 1253, 1375
SsiI CCGC 4 cut(s) 821, 880, 1031, 1070
SspI AATATT 1 cut(s) 554
SspMI CTAG 2 cut(s) 59, 834
StyD4I CCNGG 5 cut(s) 165, 389, 593, 883, 1317
StyI CCWWGG 2 cut(s) 1232, 1280
TaaI ACNGT 3 cut(s) 1004, 1342, 1351
TaiI ACGT 6 cut(s) 342, 350, 537, 858, 908, 1264
TaqI TCGA 8 cut(s) 456, 549, 579, 606, 897, 987, 1053, 1116
TaqII GACCGA 1 cut(s) 423
TasI AATT 9 cut(s) 248, 476, 624, 656, 679, 699, 866, 1253, 1375
TauI GCSGC 1 cut(s) 882
TfiI GAWTC 1 cut(s) 736
Tru1I TTAA 4 cut(s) 284, 864, 870, 1378
Tru9I TTAA 4 cut(s) 284, 864, 870, 1378
TscAI CASTG 4 cut(s) 19, 109, 690, 847
TseFI GTSAC 1 cut(s) 838
TseI GCWGC 2 cut(s) 794, 1304
Tsp45I GTSAC 1 cut(s) 838
TspDTI ATGAA 3 cut(s) 44, 132, 427
TspRI CASTG 4 cut(s) 19, 109, 690, 847
Tth111I GACNNNGTC 1 cut(s) 209
VpaK11BI GGWCC 1 cut(s) 1321
XapI RAATTY 4 cut(s) 248, 679, 699, 866
XbaI TCTAGA 1 cut(s) 58
XcmI CCANNNNNNNNNTGG 2 cut(s) 934, 1239
XhoI CTCGAG 1 cut(s) 605
XmiI GTMKAC 3 cut(s) 1173, 1286, 1344
XmnI GAANNNNTTC 2 cut(s) 249, 480
XspI CTAG 2 cut(s) 59, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.