Rw2G054280

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000188
Physical Location & Seq
Forward (+)
81935068 .. 81938204
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G054280.1

Sequence Viewer

Length: 1380 bp
ATGAATAGATTAATGAGGAAAAGAACCTTCTGTACAGAGCTTTTGGAGGCCAAATCACCTGTGCCTGCTTCGTGTTGCATCTTCAAAGTTCCCGAGGTGCTACGAAGACAAAAAAAGGAGGCATACGCACCCGACATGGTCTCAATCGGACCCTTTCATCGAGGTGCTAAAAAATTACAACTCGTGGAAAATGTGAAAAAATGGTATTTAAGATGTTTCCTCGCGCGCGAGAGCCAGCCCCCGAACTCGACATCATTGAACCTGGACTTGCTTGACATAGATAGCTTGACTGTAAGCGTGGAGAGGTTGACTGAAAGGATCAAGGCAGAGAAACTGGATAAACGAGCCCGGGATTGTTATTCAGACCCATGCAGTCATCTTGACCAAAAGGACTTCATAGATATGCTCATACTCGATGGTTGTTTCTTGATAGAATTATTTCGGAAGGCATCTGTTCGATCACGACAAGATAACGACGACCCTATTTTCAACGTGCCTTGTATGCTCGAATATCTATACCATGATCTTCTGTTACTCGAAAATCAGCTGCCCTGGTTTGTGCTCGAGTTTTTCTATAAGGTAATTGAGAGTGGCAACACCAAGTCTCTCAATGCATTGGTATTCGACTTCTTCAAAAATTCAGTGGCTGATGCCAAAATTTTGAGGAACCCCGATCCCGAGTCTTCTGTTAAGATTCTTCACATACTTGATTTTATTAGAACTGCCCTCGTTGATACCCCAAGTTCGATAGCTGCCGCCAAACCAGCTGACATCCACCTGCCGCAAAGGATACCTAGTGCTGCTACTCTTTCGGAGGCTGGCGTTATATTTAAAAAGGCCAAAGAAAGTTGCATATTGAACATAACGTTCAACAATGGCGTTTTCACCATTCCTCAGTTGGCTATCGATGAGAGTACAGGTCCTTTGTTCAGGAACCTTATGGCCTTCGAGCAGTGTTATTACAATTGCGAGCACAAGTTCAGGAACCTTATGGCCTTCGAGCAGTGTTATTACAATTGCGAGCACAAGATAACATCCTATGCGGTTTTGATGGATAGCCTCATCGATACGAACAAGGATGTGGATCTTCTATGTGAGGAAGAGATAATAGCCAACTGGTTGAGTGCTGATGATGCTTCTAAGTTCTTCAACGATCTATATACTGACACCACAGTCATTGAGTTTTTCTACGAGGATCTCTGCAAAAGAGTGAATGAATATCACAAAGCTCCATGCAACAGGTGGAGAGAAAAATTGAAACGTGATTATTTTGATACACCATGGTCTACTATCTCTTTTTTTGCAGCTTTTGTCCTCCTGGTCCTCACCTTCTTGCAGACCATATACACAATCCAGCCATACTATCATCCTCGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

459

Amino Acids

53.27

Weight (kDa)

5.93

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 27 - 322 4e-76 Plant protein of unknown function
DUF247 PF03140 322 - 442 5e-39 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 786
AasI GACNNNNNNGTC 1 cut(s) 1172
Acc36I ACCTGC 1 cut(s) 786
AccI GTMKAC 1 cut(s) 1286
AccII CGCG 3 cut(s) 224, 226, 228
AciI CCGC 3 cut(s) 756, 782, 1043
AclI AACGTT 1 cut(s) 866
AclWI GGATC 4 cut(s) 326, 668, 1092, 1203
AcsI RAATTY 2 cut(s) 637, 657
AfaI GTAC 2 cut(s) 34, 916
AgsI TTSAA 8 cut(s) 85, 259, 490, 634, 859, 871, 1150, 1258
AjnI CCWGG 3 cut(s) 261, 551, 1317
AluBI AGCT 7 cut(s) 40, 285, 547, 752, 767, 1229, 1307
AluI AGCT 7 cut(s) 40, 285, 547, 752, 767, 1229, 1307
Alw21I GWGCWC 3 cut(s) 564, 975, 1026
Alw26I GTCTC 2 cut(s) 145, 609
AlwI GGATC 4 cut(s) 326, 668, 1092, 1203
AlwNI CAGNNNCTG 1 cut(s) 647
Ama87I CYCGRG 4 cut(s) 92, 348, 563, 677
AoxI GGCC 4 cut(s) 48, 837, 942, 993
ApeKI GCWGC 4 cut(s) 547, 752, 800, 1304
ApoI RAATTY 2 cut(s) 637, 657
AseI ATTAAT 1 cut(s) 11
Asp700I GAANNNNTTC 1 cut(s) 438
AspLEI GCGC 2 cut(s) 226, 228
AspS9I GGNCC 3 cut(s) 149, 920, 1321
AsuC2I CCSGG 2 cut(s) 349, 350
AsuHPI GGTGA 3 cut(s) 48, 877, 1318
AvaI CYCGRG 4 cut(s) 92, 348, 563, 677
AvaII GGWCC 3 cut(s) 149, 920, 1321
BanII GRGCYC 1 cut(s) 349
BauI CACGAG 2 cut(s) 182, 1371
BbsI GAAGAC 2 cut(s) 112, 675
Bbv12I GWGCWC 3 cut(s) 564, 975, 1026
BbvI GCAGC 4 cut(s) 534, 739, 787, 1316
BccI CCATC 2 cut(s) 410, 1045
BciT130I CCWGG 3 cut(s) 263, 553, 1319
BciVI GTATCC 1 cut(s) 783
BcnI CCSGG 2 cut(s) 349, 350
BcoDI GTCTC 2 cut(s) 145, 609
BfaI CTAG 1 cut(s) 795
BfuAI ACCTGC 1 cut(s) 786
BfuI GTATCC 1 cut(s) 783
BisI GCNGC 6 cut(s) 548, 753, 756, 782, 801, 1305
BlsI GCNGC 6 cut(s) 549, 754, 757, 783, 802, 1306
Bme1390I CCNGG 5 cut(s) 263, 349, 350, 553, 1319
Bme18I GGWCC 3 cut(s) 149, 920, 1321
BmeT110I CYCGRG 4 cut(s) 92, 348, 563, 677
BmgT120I GGNCC 3 cut(s) 149, 920, 1321
BmiI GGNNCC 4 cut(s) 151, 668, 935, 986
BmrFI CCNGG 5 cut(s) 263, 349, 350, 553, 1319
BmsI GCATC 4 cut(s) 87, 458, 640, 1123
BpiI GAAGAC 2 cut(s) 112, 675
BpuMI CCSGG 2 cut(s) 349, 350
Bsa29I ATCGAT 2 cut(s) 906, 1065
BsaBI GATNNNNATC 1 cut(s) 1083
BsaI GGTCTC 1 cut(s) 145
BsaJI CCNNGG 4 cut(s) 93, 348, 551, 1280
Bse1I ACTGG 2 cut(s) 339, 1121
Bse8I GATNNNNATC 1 cut(s) 1083
BseBI CCWGG 3 cut(s) 263, 553, 1319
BseCI ATCGAT 2 cut(s) 906, 1065
BseDI CCNNGG 4 cut(s) 93, 348, 551, 1280
BseGI GGATG 4 cut(s) 771, 1034, 1084, 1366
BseJI GATNNNNATC 1 cut(s) 1083
BseMII CTCAG 1 cut(s) 908
BseNI ACTGG 2 cut(s) 339, 1121
BsePI GCGCGC 1 cut(s) 224
BseXI GCAGC 4 cut(s) 534, 739, 787, 1316
Bsh1236I CGCG 3 cut(s) 224, 226, 228
BshFI GGCC 4 cut(s) 50, 839, 944, 995
BshVI ATCGAT 2 cut(s) 906, 1065
BsiHKAI GWGCWC 3 cut(s) 564, 975, 1026
BsiHKCI CYCGRG 4 cut(s) 92, 348, 563, 677
BsiSI CCGG 1 cut(s) 349
BsmAI GTCTC 2 cut(s) 145, 609
BsnI GGCC 4 cut(s) 50, 839, 944, 995
Bso31I GGTCTC 1 cut(s) 145
BsoBI CYCGRG 4 cut(s) 92, 348, 563, 677
Bsp1286I GDGCHC 4 cut(s) 349, 564, 975, 1026
Bsp1407I TGTACA 1 cut(s) 32
Bsp143I GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
Bsp19I CCATGG 1 cut(s) 1280
BspACI CCGC 3 cut(s) 756, 782, 1043
BspANI GGCC 4 cut(s) 50, 839, 944, 995
BspCNI CTCAG 1 cut(s) 907
BspDI ATCGAT 2 cut(s) 906, 1065
BspFNI CGCG 3 cut(s) 224, 226, 228
BspLI GGNNCC 4 cut(s) 151, 668, 935, 986
BspMI ACCTGC 1 cut(s) 786
BspPI GGATC 4 cut(s) 326, 668, 1092, 1203
BspTNI GGTCTC 1 cut(s) 145
BsrGI TGTACA 1 cut(s) 32
BsrI ACTGG 2 cut(s) 339, 1121
BssECI CCNNGG 4 cut(s) 93, 348, 551, 1280
BssHII GCGCGC 1 cut(s) 224
BssMI GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
BssSI CACGAG 2 cut(s) 182, 1371
BssT1I CCWWGG 1 cut(s) 1280
Bst2BI CACGAG 2 cut(s) 182, 1371
Bst2UI CCWGG 3 cut(s) 263, 553, 1319
Bst4CI ACNGT 2 cut(s) 292, 1174
Bst6I CTCTTC 1 cut(s) 1095
BstAUI TGTACA 1 cut(s) 32
BstC8I GCNNGC 6 cut(s) 66, 226, 236, 820, 971, 1022
BstDEI CTNAG 2 cut(s) 894, 1140
BstDSI CCRYGG 1 cut(s) 1280
BstF5I GGATG 4 cut(s) 771, 1034, 1084, 1366
BstFNI CGCG 3 cut(s) 224, 226, 228
BstHHI GCGC 2 cut(s) 226, 228
BstKTI GATC 7 cut(s) 321, 461, 526, 676, 1087, 1156, 1198
BstMAI GTCTC 2 cut(s) 145, 609
BstMBI GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
BstMWI GCNNNNNNNGC 3 cut(s) 502, 764, 1133
BstNI CCWGG 3 cut(s) 263, 553, 1319
BstSCI CCNGG 5 cut(s) 261, 347, 348, 551, 1317
BstUI CGCG 3 cut(s) 224, 226, 228
BstV1I GCAGC 4 cut(s) 534, 739, 787, 1316
BstV2I GAAGAC 2 cut(s) 112, 675
BstX2I RGATCY 2 cut(s) 1084, 1195
BstYI RGATCY 2 cut(s) 1084, 1195
Bsu15I ATCGAT 2 cut(s) 906, 1065
BsuI GTATCC 1 cut(s) 783
BsuRI GGCC 4 cut(s) 50, 839, 944, 995
BsuTUI ATCGAT 2 cut(s) 906, 1065
BtgI CCRYGG 1 cut(s) 1280
BtsCI GGATG 4 cut(s) 771, 1034, 1084, 1366
BtsI GCAGTG 2 cut(s) 959, 1010
BtsIMutI CAGTG 3 cut(s) 648, 959, 1010
BveI ACCTGC 1 cut(s) 786
Cac8I GCNNGC 6 cut(s) 66, 226, 236, 820, 971, 1022
CaiI CAGNNNCTG 1 cut(s) 647
CfoI GCGC 2 cut(s) 226, 228
Cfr13I GGNCC 3 cut(s) 149, 920, 1321
Cfr9I CCCGGG 1 cut(s) 348
ClaI ATCGAT 2 cut(s) 906, 1065
Csp6I GTAC 2 cut(s) 33, 915
CspCI CAANNNNNGTGG 2 cut(s) 1159, 1194
CviAII CATG 5 cut(s) 136, 369, 521, 1233, 1281
CviQI GTAC 2 cut(s) 33, 915
DdeI CTNAG 2 cut(s) 894, 1140
DpnI GATC 7 cut(s) 320, 460, 525, 675, 1086, 1155, 1197
DpnII GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
DraI TTTAAA 1 cut(s) 832
DrdI GACNNNNNNGTC 1 cut(s) 1172
DseDI GACNNNNNNGTC 1 cut(s) 1172
Eam1104I CTCTTC 1 cut(s) 1095
EarI CTCTTC 1 cut(s) 1095
Eco130I CCWWGG 1 cut(s) 1280
Eco24I GRGCYC 1 cut(s) 349
Eco31I GGTCTC 1 cut(s) 145
Eco47I GGWCC 3 cut(s) 149, 920, 1321
Eco88I CYCGRG 4 cut(s) 92, 348, 563, 677
EcoO109I RGGNCCY 1 cut(s) 920
EcoRII CCWGG 3 cut(s) 261, 551, 1317
EcoT14I CCWWGG 1 cut(s) 1280
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 349
ErhI CCWWGG 1 cut(s) 1280
FaeI CATG 5 cut(s) 139, 372, 524, 1236, 1284
FatI CATG 5 cut(s) 135, 368, 520, 1232, 1280
FblI GTMKAC 1 cut(s) 1286
Fnu4HI GCNGC 6 cut(s) 548, 753, 756, 782, 801, 1305
FokI GGATG 4 cut(s) 758, 1021, 1091, 1353
FriOI GRGCYC 1 cut(s) 349
Fsp4HI GCNGC 6 cut(s) 548, 753, 756, 782, 801, 1305
FspBI CTAG 1 cut(s) 795
GlaI GCGC 2 cut(s) 225, 227
GluI GCNGC 6 cut(s) 548, 753, 756, 782, 801, 1305
HaeIII GGCC 4 cut(s) 50, 839, 944, 995
HapII CCGG 1 cut(s) 349
HhaI GCGC 2 cut(s) 226, 228
Hin1II CATG 5 cut(s) 139, 372, 524, 1236, 1284
Hin6I GCGC 2 cut(s) 224, 226
HinP1I GCGC 2 cut(s) 224, 226
HincII GTYRAC 1 cut(s) 309
HindII GTYRAC 1 cut(s) 309
HinfI GANTC 2 cut(s) 680, 694
HpaII CCGG 1 cut(s) 349
HphI GGTGA 3 cut(s) 48, 877, 1318
Hpy166II GTNNAC 2 cut(s) 309, 1287
Hpy188I TCNGA 4 cut(s) 149, 364, 444, 814
Hpy188III TCNNGA 7 cut(s) 92, 380, 427, 462, 677, 931, 982
Hpy8I GTNNAC 2 cut(s) 309, 1287
Hpy99I CGWCG 1 cut(s) 479
HpyAV CCTTC 5 cut(s) 37, 439, 955, 1006, 1339
HpyCH4III ACNGT 2 cut(s) 292, 1174
HpyCH4IV ACGT 3 cut(s) 492, 866, 1261
HpyCH4V TGCA 8 cut(s) 78, 372, 614, 852, 1203, 1236, 1304, 1336
HpyF10VI GCNNNNNNNGC 3 cut(s) 502, 764, 1133
HpyF3I CTNAG 2 cut(s) 894, 1140
HpySE526I ACGT 3 cut(s) 492, 866, 1261
Hsp92II CATG 5 cut(s) 139, 372, 524, 1236, 1284
HspAI GCGC 2 cut(s) 224, 226
Kzo9I GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
LmnI GCTCC 1 cut(s) 1234
Lsp1109I GCAGC 4 cut(s) 534, 739, 787, 1316
LweI GCATC 4 cut(s) 87, 458, 640, 1123
MaeI CTAG 1 cut(s) 795
MaeII ACGT 3 cut(s) 492, 866, 1261
MaeIII GTNAC 1 cut(s) 531
MalI GATC 7 cut(s) 320, 460, 525, 675, 1086, 1155, 1197
MauBI CGCGCGCG 1 cut(s) 224
MboI GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
MboII GAAGA 9 cut(s) 73, 117, 518, 622, 675, 689, 1079, 1112, 1138
MfeI CAATTG 2 cut(s) 964, 1015
MflI RGATCY 2 cut(s) 1084, 1195
MhlI GDGCHC 4 cut(s) 349, 564, 975, 1026
MluCI AATT 8 cut(s) 173, 434, 582, 637, 657, 964, 1015, 1253
MlyI GAGTC 1 cut(s) 689
Mph1103I ATGCAT 1 cut(s) 616
MroXI GAANNNNTTC 1 cut(s) 438
MseI TTAA 5 cut(s) 11, 209, 690, 831, 1378
MslI CAYNNNNRTG 3 cut(s) 162, 401, 1371
MspA1I CMGCKG 2 cut(s) 547, 767
MspI CCGG 1 cut(s) 349
MspR9I CCNGG 5 cut(s) 263, 349, 350, 553, 1319
MunI CAATTG 2 cut(s) 964, 1015
MvaI CCWGG 3 cut(s) 263, 553, 1319
MvnI CGCG 3 cut(s) 224, 226, 228
MwoI GCNNNNNNNGC 3 cut(s) 502, 764, 1133
NciI CCSGG 2 cut(s) 349, 350
NcoI CCATGG 1 cut(s) 1280
NdeII GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
NlaIII CATG 5 cut(s) 139, 372, 524, 1236, 1284
NlaIV GGNNCC 4 cut(s) 151, 668, 935, 986
NsiI ATGCAT 1 cut(s) 616
PaeR7I CTCGAG 1 cut(s) 563
PaqCI CACCTGC 1 cut(s) 786
PauI GCGCGC 1 cut(s) 224
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 1 cut(s) 694
PflFI GACNNNGTC 1 cut(s) 137
PkrI GCNGC 6 cut(s) 549, 754, 757, 783, 802, 1306
PleI GAGTC 1 cut(s) 688
PpsI GAGTC 1 cut(s) 688
PpuMI RGGWCCY 1 cut(s) 920
PshBI ATTAAT 1 cut(s) 11
Psp1406I AACGTT 1 cut(s) 866
Psp5II RGGWCCY 1 cut(s) 920
Psp6I CCWGG 3 cut(s) 261, 551, 1317
PspGI CCWGG 3 cut(s) 261, 551, 1317
PspN4I GGNNCC 4 cut(s) 151, 668, 935, 986
PspPI GGNCC 3 cut(s) 149, 920, 1321
PspPPI RGGWCCY 1 cut(s) 920
PspXI VCTCGAGB 1 cut(s) 563
PsrI GAACNNNNNNTAC 2 cut(s) 16, 48
PstNI CAGNNNCTG 1 cut(s) 647
PsuI RGATCY 2 cut(s) 1084, 1195
PsyI GACNNNGTC 1 cut(s) 137
PteI GCGCGC 1 cut(s) 224
PvuII CAGCTG 2 cut(s) 547, 767
RsaI GTAC 2 cut(s) 34, 916
RsaNI GTAC 2 cut(s) 33, 915
RseI CAYNNNNRTG 3 cut(s) 162, 401, 1371
SaqAI TTAA 5 cut(s) 11, 209, 690, 831, 1378
SatI GCNGC 6 cut(s) 548, 753, 756, 782, 801, 1305
Sau3AI GATC 7 cut(s) 318, 458, 523, 673, 1084, 1153, 1195
Sau96I GGNCC 3 cut(s) 149, 920, 1321
SchI GAGTC 1 cut(s) 689
ScrFI CCNGG 5 cut(s) 263, 349, 350, 553, 1319
SduI GDGCHC 4 cut(s) 349, 564, 975, 1026
SfaNI GCATC 4 cut(s) 87, 458, 640, 1123
Sfr274I CTCGAG 1 cut(s) 563
SinI GGWCC 3 cut(s) 149, 920, 1321
SlaI CTCGAG 1 cut(s) 563
SmaI CCCGGG 1 cut(s) 350
SmiMI CAYNNNNRTG 3 cut(s) 162, 401, 1371
SmlI CTYRAG 1 cut(s) 563
SmoI CTYRAG 1 cut(s) 563
Sse9I AATT 8 cut(s) 173, 434, 582, 637, 657, 964, 1015, 1253
SsiI CCGC 3 cut(s) 756, 782, 1043
SspMI CTAG 1 cut(s) 795
StyD4I CCNGG 5 cut(s) 261, 347, 348, 551, 1317
StyI CCWWGG 1 cut(s) 1280
TaaI ACNGT 2 cut(s) 292, 1174
TaiI ACGT 3 cut(s) 495, 869, 1264
TasI AATT 8 cut(s) 173, 434, 582, 637, 657, 964, 1015, 1253
TatI WGTACW 2 cut(s) 32, 914
TauI GCSGC 2 cut(s) 758, 784
TfiI GAWTC 1 cut(s) 694
Tru1I TTAA 5 cut(s) 11, 209, 690, 831, 1378
Tru9I TTAA 5 cut(s) 11, 209, 690, 831, 1378
TscAI CASTG 3 cut(s) 648, 959, 1010
TseI GCWGC 4 cut(s) 547, 752, 800, 1304
TspDTI ATGAA 4 cut(s) 17, 146, 385, 1230
TspMI CCCGGG 1 cut(s) 348
TspRI CASTG 3 cut(s) 648, 959, 1010
Tth111I GACNNNGTC 1 cut(s) 137
VpaK11BI GGWCC 3 cut(s) 149, 920, 1321
VspI ATTAAT 1 cut(s) 11
XapI RAATTY 2 cut(s) 637, 657
XcmI CCANNNNNNNNNTGG 2 cut(s) 895, 1239
XhoI CTCGAG 1 cut(s) 563
XmaI CCCGGG 1 cut(s) 348
XmiI GTMKAC 1 cut(s) 1286
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 1 cut(s) 795
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.