Rorug05G0196400

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000188
Physical Location & Seq
Reverse (-)
19363876 .. 19365369
1494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0196400.1

Sequence Viewer

Length: 1494 bp
ATGAAAGGAGCAGAACACCACTCAAAGCACCGTCGTCTGCTTTGGAGAGATCTTCTACAGGTTAAAAATACCTTTGTTCAAGGTCCATGGATAGTGTTGGGAGATTTTAATTGTGTTCTTGGAGCTCATGAAAAAAGAGGAGGACTTCTTCCCAGTGCCATTTCTTGTTCTGAGTTTCAAGATATGTCAACTAATTGTGAACTAATTCATCTTCCTACTAAGGGCTTGCCTTATACTTGGACGAATAAAAGGGGGGTTAGTGCGAATGTTGAAATGAGGCTCGATCGGTGTCTCAGTAATTTTTCTTGGATTGATGTTTGGCGCAAGTTGGAGTGCTCCACCCTCCCTCGTTGTTCCTCAGATCATTCTCCTCTTTTAGTGTCCTTCTCAAGGCTCATGCTAATTCAGCGACCACCGTTCCGGTTTCAACGCATGTGGTTGGATCATCCAAGTTTTCTTTCTTTGGTAACAGATGTCTGGCAGAGTGCTCAATTCTTTGGTAATCCAATGTTTGTGTTGGCTTCTAAGCTTAGGACTCTTAAACAACGGTTTCGGGCTTGGAATAAAACTGAATTTGGGGATGTCAACAAAATGGTGGAGAATTCTTTTCTGGACTTGGACAGAATTCAGCAGGAAATTGCTAGTTTGGGGCCTTCAGATGACAGGCTTTCCCAGGAAAGTGTGGCTAGCGCTCAAGTTCATATGGCCCTTGCTCATCAAGAAAGATTTTACTGTGATAAATCAAGGATTAAGTGGCTTTCAGAAGGTGATCGTAACACATCTTTCTTCCATGCAATGGTAAAGGTTCGTCAACTTAAGCATTCCTTATCGGTTTTGAGGGATGGCAGCCGTGTTATTGACGATCCGAAGGAGATCAGTGACCATGTTATTAATTATTTTAGCGACCTTTTCACTGCTGATTCTTCTGTTATTGACACTGGTTTGGTTTCTCAAGTAATTCCCAAGATTGTAACTAATGAAGAAAATGCTCAGCTTACGGCAATTCCCACTTCCGAAGAAATTTTTCAAGTTATGTGTTCCATGGATCATAATAGCTCTCCAGGTCCAGATGGTTTTGGGGGAGTTTTCTATATGAAATGCTGGTCGATTGTTGGTGAGGATGTTATCCAGGCTGTTCAAAGTTTTTTCACTCATGGGTACATTCTCCCCCACTTTAACTCAAACTTGATGATTTTGATTCCTAAAGTTCCTGGTGCAGACTCGGTAACACAGCTGCGTCCTATTGCTATGGCGAATTTTGTTTTCAAGCTTATCACAAAAATTATAGCAGATAGATTGGGTTGTATTGCAGCTCGGATTATATCCCCAAATCAAAGTGCTTTTCTTAAAGGTCGCACTATTGCAGATCCTATTATATTGACATCAGAGTGCATCAACCTCCTGGATCATAAGTGCAAGGGTGGAAACATAGCAATTAAATTTGATGTGCAAAAGGCTTTTGGTTTTTCTGATCCTTACCCTGGACTGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

497

Amino Acids

56.2

Weight (kDa)

8.2

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 404 - 487 5.3e-07 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 796
AclWI GGATC 6 cut(s) 450, 857, 1053, 1361, 1413, 1466
AcsI RAATTY 6 cut(s) 572, 601, 624, 1020, 1255, 1439
AcuI CTGAAG 1 cut(s) 639
AfaI GTAC 1 cut(s) 1160
AfeI AGCGCT 1 cut(s) 691
AfiI CCNNNNNNNGG 5 cut(s) 221, 390, 796, 1481, 1486
AflII CTTAAG 1 cut(s) 815
AgsI TTSAA 7 cut(s) 80, 179, 272, 428, 1028, 1139, 1267
AjnI CCWGG 6 cut(s) 672, 1060, 1128, 1210, 1401, 1480
AjuI GAANNNNNNNTTGG 2 cut(s) 442, 474
AluBI AGCT 7 cut(s) 125, 529, 994, 1056, 1234, 1270, 1313
AluI AGCT 7 cut(s) 125, 529, 994, 1056, 1234, 1270, 1313
Alw21I GWGCWC 3 cut(s) 127, 338, 490
Alw26I GTCTC 1 cut(s) 296
AlwI GGATC 6 cut(s) 450, 857, 1053, 1361, 1413, 1466
Aor51HI AGCGCT 1 cut(s) 691
AoxI GGCC 2 cut(s) 650, 705
ApeKI GCWGC 3 cut(s) 846, 1234, 1310
ApoI RAATTY 6 cut(s) 572, 601, 624, 1020, 1255, 1439
AseI ATTAAT 1 cut(s) 891
Asp700I GAANNNNTTC 2 cut(s) 204, 1023
AspLEI GCGC 2 cut(s) 324, 692
AspS9I GGNCC 4 cut(s) 83, 650, 706, 1064
AsuHPI GGTGA 2 cut(s) 779, 1127
AsuNHI GCTAGC 1 cut(s) 686
AvaII GGWCC 2 cut(s) 83, 1064
BanII GRGCYC 1 cut(s) 127
Bbv12I GWGCWC 3 cut(s) 127, 338, 490
BbvI GCAGC 3 cut(s) 858, 1221, 1322
BccI CCATC 2 cut(s) 836, 1064
BceAI ACGGC 2 cut(s) 834, 1014
BciT130I CCWGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
BcoDI GTCTC 1 cut(s) 296
BfaI CTAG 2 cut(s) 642, 687
BfmI CTRYAG 1 cut(s) 56
BfoI RGCGCY 1 cut(s) 693
BfrI CTTAAG 1 cut(s) 815
BglII AGATCT 1 cut(s) 49
BisI GCNGC 3 cut(s) 847, 1235, 1311
BlpI GCTNAGC 1 cut(s) 990
BlsI GCNGC 3 cut(s) 848, 1236, 1312
Bme1390I CCNGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
Bme18I GGWCC 2 cut(s) 83, 1064
BmgT120I GGNCC 4 cut(s) 83, 650, 706, 1064
BmiI GGNNCC 1 cut(s) 651
BmrFI CCNGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
BmrI ACTGGG 1 cut(s) 147
BmsI GCATC 1 cut(s) 1401
BmtI GCTAGC 1 cut(s) 690
BmuI ACTGGG 1 cut(s) 147
BpmI CTGGAG 1 cut(s) 1044
Bpu10I CCTNAGC 1 cut(s) 530
Bpu1102I GCTNAGC 1 cut(s) 990
BpuEI CTTGAG 3 cut(s) 373, 678, 936
BsaJI CCNNGG 4 cut(s) 86, 672, 1041, 1480
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 5 cut(s) 221, 390, 796, 1481, 1486
Bse1I ACTGG 3 cut(s) 153, 943, 1491
Bse3DI GCAATG 1 cut(s) 801
BseBI CCWGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
BseDI CCNNGG 4 cut(s) 86, 672, 1041, 1480
BseGI GGATG 4 cut(s) 445, 586, 847, 1126
BseLI CCNNNNNNNGG 5 cut(s) 221, 390, 796, 1481, 1486
BseMI GCAATG 1 cut(s) 801
BseMII CTCAG 4 cut(s) 162, 307, 372, 1004
BseNI ACTGG 3 cut(s) 153, 943, 1491
BseRI GAGGAG 2 cut(s) 153, 360
BseXI GCAGC 3 cut(s) 858, 1221, 1322
BsgI GTGCAG 1 cut(s) 1236
Bsh1285I CGRYCG 1 cut(s) 286
BshFI GGCC 2 cut(s) 652, 707
BsiEI CGRYCG 1 cut(s) 286
BsiHKAI GWGCWC 3 cut(s) 127, 338, 490
BsiSI CCGG 1 cut(s) 421
BslI CCNNNNNNNGG 5 cut(s) 221, 390, 796, 1481, 1486
BsmAI GTCTC 1 cut(s) 296
BsmI GAATGC 1 cut(s) 820
BsnI GGCC 2 cut(s) 652, 707
Bsp1286I GDGCHC 3 cut(s) 127, 338, 490
Bsp1720I GCTNAGC 1 cut(s) 990
Bsp19I CCATGG 2 cut(s) 86, 1041
BspANI GGCC 2 cut(s) 652, 707
BspCNI CTCAG 4 cut(s) 163, 306, 371, 1003
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 1 cut(s) 651
BspOI GCTAGC 1 cut(s) 690
BspPI GGATC 6 cut(s) 450, 857, 1053, 1361, 1413, 1466
BspTI CTTAAG 1 cut(s) 815
BsrDI GCAATG 1 cut(s) 801
BsrI ACTGG 3 cut(s) 153, 943, 1491
BssECI CCNNGG 4 cut(s) 86, 672, 1041, 1480
BssT1I CCWWGG 2 cut(s) 86, 1041
Bst2UI CCWGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
Bst4CI ACNGT 4 cut(s) 32, 417, 549, 734
BstAFI CTTAAG 1 cut(s) 815
BstC8I GCNNGC 2 cut(s) 227, 688
BstDEI CTNAG 7 cut(s) 171, 219, 293, 358, 525, 530, 990
BstDSI CCRYGG 2 cut(s) 86, 1041
BstENI CCTNNNNNAGG 1 cut(s) 388
BstF5I GGATG 4 cut(s) 445, 586, 847, 1126
BstH2I RGCGCY 1 cut(s) 693
BstHHI GCGC 2 cut(s) 324, 692
BstMAI GTCTC 1 cut(s) 296
BstMCI CGRYCG 1 cut(s) 286
BstMWI GCNNNNNNNGC 1 cut(s) 406
BstNI CCWGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
BstNSI RCATGY 1 cut(s) 436
BstSCI CCNGG 6 cut(s) 672, 1060, 1128, 1210, 1401, 1480
BstSFI CTRYAG 1 cut(s) 56
BstV1I GCAGC 3 cut(s) 858, 1221, 1322
BstX2I RGATCY 2 cut(s) 49, 1366
BstYI RGATCY 2 cut(s) 49, 1366
BsuRI GGCC 2 cut(s) 652, 707
BtgI CCRYGG 2 cut(s) 86, 1041
BtsCI GGATG 4 cut(s) 445, 586, 847, 1126
BtsI GCAGTG 1 cut(s) 912
BtsIMutI CAGTG 4 cut(s) 160, 883, 912, 936
Cac8I GCNNGC 2 cut(s) 227, 688
CciI TCATGA 1 cut(s) 127
CfoI GCGC 2 cut(s) 324, 692
Cfr13I GGNCC 4 cut(s) 83, 650, 706, 1064
CseI GACGC 1 cut(s) 1226
Csp6I GTAC 1 cut(s) 1159
CspCI CAANNNNNGTGG 2 cut(s) 416, 451
CviAII CATG 8 cut(s) 87, 128, 397, 433, 791, 884, 1042, 1154
CviQI GTAC 1 cut(s) 1159
DdeI CTNAG 7 cut(s) 171, 219, 293, 358, 525, 530, 990
Ecl136II GAGCTC 1 cut(s) 125
Eco130I CCWWGG 2 cut(s) 86, 1041
Eco24I GRGCYC 1 cut(s) 127
Eco47I GGWCC 2 cut(s) 83, 1064
Eco47III AGCGCT 1 cut(s) 691
Eco53kI GAGCTC 1 cut(s) 125
Eco57I CTGAAG 1 cut(s) 639
EcoICRI GAGCTC 1 cut(s) 125
EcoNI CCTNNNNNAGG 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 650
EcoRI GAATTC 2 cut(s) 601, 624
EcoRII CCWGG 6 cut(s) 672, 1060, 1128, 1210, 1401, 1480
EcoT14I CCWWGG 2 cut(s) 86, 1041
EcoT38I GRGCYC 1 cut(s) 127
ErhI CCWWGG 2 cut(s) 86, 1041
FaeI CATG 8 cut(s) 90, 131, 400, 436, 794, 887, 1045, 1157
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FatI CATG 8 cut(s) 86, 127, 396, 432, 790, 883, 1041, 1153
FauNDI CATATG 1 cut(s) 702
Fnu4HI GCNGC 3 cut(s) 847, 1235, 1311
FokI GGATG 4 cut(s) 432, 593, 854, 1133
FriOI GRGCYC 1 cut(s) 127
Fsp4HI GCNGC 3 cut(s) 847, 1235, 1311
FspBI CTAG 2 cut(s) 642, 687
GlaI GCGC 2 cut(s) 323, 691
GluI GCNGC 3 cut(s) 847, 1235, 1311
GsuI CTGGAG 1 cut(s) 1044
HaeII RGCGCY 1 cut(s) 693
HaeIII GGCC 2 cut(s) 652, 707
HapII CCGG 1 cut(s) 421
HgaI GACGC 1 cut(s) 1226
HhaI GCGC 2 cut(s) 324, 692
Hin1II CATG 8 cut(s) 90, 131, 400, 436, 794, 887, 1045, 1157
Hin6I GCGC 2 cut(s) 322, 690
HinP1I GCGC 2 cut(s) 322, 690
HincII GTYRAC 3 cut(s) 189, 586, 812
HindII GTYRAC 3 cut(s) 189, 586, 812
HindIII AAGCTT 2 cut(s) 527, 1268
HinfI GANTC 4 cut(s) 535, 920, 1198, 1220
HpaII CCGG 1 cut(s) 421
HphI GGTGA 2 cut(s) 779, 1127
Hpy166II GTNNAC 4 cut(s) 189, 200, 586, 812
Hpy188I TCNGA 9 cut(s) 172, 361, 658, 763, 867, 1015, 1317, 1387, 1471
Hpy188III TCNNGA 5 cut(s) 128, 179, 611, 719, 1067
Hpy8I GTNNAC 4 cut(s) 189, 200, 586, 812
Hpy99I CGWCG 1 cut(s) 36
HpyAV CCTTC 4 cut(s) 394, 663, 758, 862
HpyCH4III ACNGT 4 cut(s) 32, 417, 549, 734
HpyCH4V TGCA 7 cut(s) 794, 1217, 1310, 1364, 1392, 1416, 1450
HpyF10VI GCNNNNNNNGC 1 cut(s) 406
HpyF3I CTNAG 7 cut(s) 171, 219, 293, 358, 525, 530, 990
Hsp92II CATG 8 cut(s) 90, 131, 400, 436, 794, 887, 1045, 1157
HspAI GCGC 2 cut(s) 322, 690
LmnI GCTCC 3 cut(s) 8, 122, 341
Lsp1109I GCAGC 3 cut(s) 858, 1221, 1322
LweI GCATC 1 cut(s) 1401
MaeI CTAG 2 cut(s) 642, 687
MaeIII GTNAC 5 cut(s) 466, 773, 878, 970, 1225
MboII GAAGA 7 cut(s) 44, 140, 203, 778, 915, 992, 1028
MflI RGATCY 2 cut(s) 49, 1366
MhlI GDGCHC 3 cut(s) 127, 338, 490
MlyI GAGTC 2 cut(s) 529, 1214
MmeI TCCRAC 2 cut(s) 309, 420
MroXI GAANNNNTTC 2 cut(s) 204, 1023
MslI CAYNNNNRTG 1 cut(s) 1387
MspA1I CMGCKG 1 cut(s) 1234
MspCI CTTAAG 1 cut(s) 815
MspI CCGG 1 cut(s) 421
MspR9I CCNGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
Mva1269I GAATGC 1 cut(s) 820
MvaI CCWGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
MwoI GCNNNNNNNGC 1 cut(s) 406
NcoI CCATGG 2 cut(s) 86, 1041
NdeI CATATG 1 cut(s) 702
NheI GCTAGC 1 cut(s) 686
NlaIII CATG 8 cut(s) 90, 131, 400, 436, 794, 887, 1045, 1157
NlaIV GGNNCC 1 cut(s) 651
NmuCI GTSAC 1 cut(s) 878
NspI RCATGY 1 cut(s) 436
PagI TCATGA 1 cut(s) 127
PctI GAATGC 1 cut(s) 820
PdmI GAANNNNTTC 2 cut(s) 204, 1023
PfeI GAWTC 2 cut(s) 920, 1198
PflMI CCANNNNNTGG 1 cut(s) 796
PfoI TCCNGGA 1 cut(s) 1401
PkrI GCNGC 3 cut(s) 848, 1236, 1312
Ple19I CGATCG 1 cut(s) 286
PleI GAGTC 2 cut(s) 529, 1214
PpsI GAGTC 2 cut(s) 529, 1214
PshBI ATTAAT 1 cut(s) 891
Psp124BI GAGCTC 1 cut(s) 127
Psp6I CCWGG 6 cut(s) 672, 1060, 1128, 1210, 1401, 1480
PspGI CCWGG 6 cut(s) 672, 1060, 1128, 1210, 1401, 1480
PspN4I GGNNCC 1 cut(s) 651
PspPI GGNCC 4 cut(s) 83, 650, 706, 1064
PsuI RGATCY 2 cut(s) 49, 1366
PvuI CGATCG 1 cut(s) 286
PvuII CAGCTG 1 cut(s) 1234
RsaI GTAC 1 cut(s) 1160
RsaNI GTAC 1 cut(s) 1159
RseI CAYNNNNRTG 1 cut(s) 1387
SacI GAGCTC 1 cut(s) 127
SatI GCNGC 3 cut(s) 847, 1235, 1311
Sau96I GGNCC 4 cut(s) 83, 650, 706, 1064
SchI GAGTC 2 cut(s) 529, 1214
ScrFI CCNGG 6 cut(s) 674, 1062, 1130, 1212, 1403, 1482
SduI GDGCHC 3 cut(s) 127, 338, 490
SfaNI GCATC 1 cut(s) 1401
SfcI CTRYAG 1 cut(s) 56
SinI GGWCC 2 cut(s) 83, 1064
SmiMI CAYNNNNRTG 1 cut(s) 1387
SmlI CTYRAG 4 cut(s) 388, 693, 815, 951
SmoI CTYRAG 4 cut(s) 388, 693, 815, 951
SspMI CTAG 2 cut(s) 642, 687
SstI GAGCTC 1 cut(s) 127
StyD4I CCNGG 6 cut(s) 672, 1060, 1128, 1210, 1401, 1480
StyI CCWWGG 2 cut(s) 86, 1041
TaaI ACNGT 4 cut(s) 32, 417, 549, 734
TaqI TCGA 2 cut(s) 282, 1106
TfiI GAWTC 2 cut(s) 920, 1198
TscAI CASTG 4 cut(s) 160, 883, 919, 943
TseFI GTSAC 1 cut(s) 878
TseI GCWGC 3 cut(s) 846, 1234, 1310
Tsp45I GTSAC 1 cut(s) 878
TspDTI ATGAA 6 cut(s) 17, 144, 197, 689, 993, 1109
TspRI CASTG 4 cut(s) 160, 883, 919, 943
Van91I CCANNNNNTGG 1 cut(s) 796
Vha464I CTTAAG 1 cut(s) 815
VpaK11BI GGWCC 2 cut(s) 83, 1064
VspI ATTAAT 1 cut(s) 891
XagI CCTNNNNNAGG 1 cut(s) 388
XapI RAATTY 6 cut(s) 572, 601, 624, 1020, 1255, 1439
XceI RCATGY 1 cut(s) 436
XmnI GAANNNNTTC 2 cut(s) 204, 1023
XspI CTAG 2 cut(s) 642, 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.