RchiOBHm_Chr2g0175171

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000188
Physical Location & Seq
Forward (+)
87503750 .. 87507212
3463 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54226

Sequence Viewer

Length: 1455 bp
ATGAGCAGCTTAGATCAGATCCAATACAAAGGCATGGGAGGTAGCAGTGATATAGAAAAGGGTGAAGTGGATGAAAGCGTTTCAGTTCATCTAGAACGTAAAGGACGTAAAGGTATGACTGTTGAAGAAAGGAAAAGAACCTTCTATACAAAGCTTTTGGGGGCCAAATCACCTTTGCCTGTTTCGTGTTGCATCTTCAAAGTTCCCGAGGTGCTACGAAGACAAAAAAAGGAGGCATACGCACCTGACGTAGTCTCAATCGGGCCCTTTCATCGAGGTGCTAAAAAATTACAACTCGTGGAAAATGTGAAAAAGTGGTATTTAAAATGTCTTCTCGCGCGCCTGCTCCCGAACCCGACAGGATTGAGCTTGAAGGACTTGCTTGAAAGCATGAGCCTAGATAGCTTGACTGAAAGTATGGAGAGCTTGGCTGAAATGATCAAGGGAAAGGAACTGGATAAACGCGCCCGGGGTTGTTATTCAGATCCATGCAATCATCTTGACCAAAACAACTTCATAGATATGCTCATACTCGATGGTTGTTTCTTGATAGAATTATTTCGGAAGGCATCTGTTCTATCACTACAAGATGAAGACGACCCTATTTTCAACGTGCCTTGTATGCTCGAATATCTATACCATGATCTTCTGTTACTCGAAAATCAGCTGCCCTGGTTTGTGCTCGAGTTTTTCTATAAGAAAATTGAGGGTGGCAACGCTAACCCTCTCGATAAATTGGTATTCAACTTCTTCAAAAAATCAGTGGCTGATGACAAAATTTTGAGGGACCCCGATCCCGAGCCTTCTAATGAGATTCTTCACATACTTGATCTGATTAGAACTGCCCTCGTTGGTATCCCCGATTCAAATTCTACCAACATATCAAACATCCACCCGCCCCAACTGCCGCAAAGGATACCTAGTGCTACTACTCTTTCAGAGGCAGGCGTTATATTTAAAAAGTCCACAGAAAGTTGCATATTGAAAATAACGTTCAACAATGGCGTTTTCACCATTCCTCCTCTGGCTATCGATGAGAGTACAGGTCCTTTGTTCAGGAACCTTATGGCCTTCGAGCAGTGTTATCACAGTTGCAAGCACAATATAACATCCTATGCGGTTTTGATGGATAGCCTCATTGATACGAACAAGGATGTGGATCTTCTATGTGAGGAAGAGATACTAGCCAACTGGTTGAGTGCTGATGATGCTTCGAAGTTCTTCAACGATCTATATACTGACACCACAGTCATTGATTTTGTCTACAAGGATCTCTGCAAAAGTGTGTGTGAATATCACAAAGCTCCATGCAACAAGTGGAGAGAAAAATTGAAACGTGATTATTTTGATACACCATGGTCTACTATCTCTTTTTTTGCAGCTTTTGTCCTCCTGGTCCTCACCTTCTTGCAGACCATATACACAATCCAGCCATACTATCATCCTCGTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

484

Amino Acids

55.21

Weight (kDa)

5.6

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 65 - 467 1.2e-110 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1247
AccI GTMKAC 2 cut(s) 1263, 1361
AccII CGCG 3 cut(s) 338, 340, 465
AciI CCGC 3 cut(s) 896, 908, 1118
AclI AACGTT 1 cut(s) 992
AclWI GGATC 5 cut(s) 13, 479, 788, 1167, 1278
AcsI RAATTY 2 cut(s) 777, 868
AfaI GTAC 1 cut(s) 1042
AjnI CCWGG 2 cut(s) 671, 1392
AluBI AGCT 8 cut(s) 9, 154, 369, 405, 426, 667, 1304, 1382
AluI AGCT 8 cut(s) 9, 154, 369, 405, 426, 667, 1304, 1382
Alw21I GWGCWC 1 cut(s) 684
Alw26I GTCTC 1 cut(s) 259
AlwI GGATC 5 cut(s) 13, 479, 788, 1167, 1278
AlwNI CAGNNNCTG 1 cut(s) 767
Ama87I CYCGRG 4 cut(s) 206, 468, 683, 797
AoxI GGCC 3 cut(s) 162, 263, 1068
ApaI GGGCCC 1 cut(s) 267
ApeKI GCWGC 3 cut(s) 6, 667, 1379
ApoI RAATTY 2 cut(s) 777, 868
Asp700I GAANNNNTTC 2 cut(s) 558, 1220
AspLEI GCGC 3 cut(s) 340, 342, 467
AspS9I GGNCC 6 cut(s) 162, 263, 264, 787, 1046, 1396
AsuC2I CCSGG 2 cut(s) 469, 470
AsuHPI GGTGA 4 cut(s) 74, 162, 1003, 1393
AsuII TTCGAA 1 cut(s) 1214
AvaI CYCGRG 4 cut(s) 206, 468, 683, 797
AvaII GGWCC 3 cut(s) 787, 1046, 1396
BaeGI GKGCMC 1 cut(s) 267
BanII GRGCYC 1 cut(s) 267
BauI CACGAG 2 cut(s) 296, 1446
BbsI GAAGAC 3 cut(s) 226, 323, 600
Bbv12I GWGCWC 1 cut(s) 684
BbvI GCAGC 3 cut(s) 18, 654, 1391
BccI CCATC 2 cut(s) 530, 1120
BciT130I CCWGG 2 cut(s) 673, 1394
BciVI GTATCC 2 cut(s) 866, 909
BclI TGATCA 1 cut(s) 438
BcnI CCSGG 2 cut(s) 469, 470
BcoDI GTCTC 1 cut(s) 259
BfaI CTAG 4 cut(s) 92, 398, 921, 1184
BfuI GTATCC 2 cut(s) 866, 909
BisI GCNGC 4 cut(s) 7, 668, 908, 1380
BlsI GCNGC 4 cut(s) 8, 669, 909, 1381
Bme1390I CCNGG 4 cut(s) 469, 470, 673, 1394
Bme18I GGWCC 3 cut(s) 787, 1046, 1396
BmeT110I CYCGRG 4 cut(s) 206, 468, 683, 797
BmgT120I GGNCC 6 cut(s) 162, 263, 264, 787, 1046, 1396
BmiI GGNNCC 5 cut(s) 163, 265, 788, 789, 1061
BmrFI CCNGG 4 cut(s) 469, 470, 673, 1394
BmsI GCATC 3 cut(s) 201, 578, 1198
BpiI GAAGAC 3 cut(s) 226, 323, 600
Bpu14I TTCGAA 1 cut(s) 1214
BpuMI CCSGG 2 cut(s) 469, 470
Bsa29I ATCGAT 1 cut(s) 1032
BsaBI GATNNNNATC 1 cut(s) 1158
BsaJI CCNNGG 5 cut(s) 207, 468, 469, 671, 1355
BsaXI ACNNNNNCTCC 2 cut(s) 1003, 1033
Bse1I ACTGG 2 cut(s) 459, 1196
Bse8I GATNNNNATC 1 cut(s) 1158
BseBI CCWGG 2 cut(s) 673, 1394
BseCI ATCGAT 1 cut(s) 1032
BseDI CCNNGG 5 cut(s) 207, 468, 469, 671, 1355
BseGI GGATG 5 cut(s) 76, 888, 1109, 1159, 1441
BseJI GATNNNNATC 1 cut(s) 1158
BseNI ACTGG 2 cut(s) 459, 1196
BsePI GCGCGC 1 cut(s) 338
BseRI GAGGAG 1 cut(s) 1011
BseSI GKGCMC 1 cut(s) 267
BseXI GCAGC 3 cut(s) 18, 654, 1391
Bsh1236I CGCG 3 cut(s) 338, 340, 465
BshFI GGCC 3 cut(s) 164, 265, 1070
BshVI ATCGAT 1 cut(s) 1032
BsiHKAI GWGCWC 1 cut(s) 684
BsiHKCI CYCGRG 4 cut(s) 206, 468, 683, 797
BsiSI CCGG 1 cut(s) 469
BslFI GGGAC 1 cut(s) 800
BsmAI GTCTC 1 cut(s) 259
BsmFI GGGAC 1 cut(s) 800
BsnI GGCC 3 cut(s) 164, 265, 1070
BsoBI CYCGRG 4 cut(s) 206, 468, 683, 797
Bsp119I TTCGAA 1 cut(s) 1214
Bsp120I GGGCCC 1 cut(s) 263
Bsp1286I GDGCHC 2 cut(s) 267, 684
Bsp19I CCATGG 1 cut(s) 1355
BspACI CCGC 3 cut(s) 896, 908, 1118
BspANI GGCC 3 cut(s) 164, 265, 1070
BspDI ATCGAT 1 cut(s) 1032
BspFNI CGCG 3 cut(s) 338, 340, 465
BspLI GGNNCC 5 cut(s) 163, 265, 788, 789, 1061
BspPI GGATC 5 cut(s) 13, 479, 788, 1167, 1278
BspT104I TTCGAA 1 cut(s) 1214
BsrI ACTGG 2 cut(s) 459, 1196
BssECI CCNNGG 5 cut(s) 207, 468, 469, 671, 1355
BssHII GCGCGC 1 cut(s) 338
BssSI CACGAG 2 cut(s) 296, 1446
BssT1I CCWWGG 1 cut(s) 1355
Bst2BI CACGAG 2 cut(s) 296, 1446
Bst2UI CCWGG 2 cut(s) 673, 1394
Bst4CI ACNGT 3 cut(s) 121, 1091, 1249
Bst6I CTCTTC 1 cut(s) 1170
BstBI TTCGAA 1 cut(s) 1214
BstC8I GCNNGC 4 cut(s) 340, 344, 946, 1097
BstDEI CTNAG 1 cut(s) 10
BstDSI CCRYGG 1 cut(s) 1355
BstF5I GGATG 5 cut(s) 76, 888, 1109, 1159, 1441
BstFNI CGCG 3 cut(s) 338, 340, 465
BstHHI GCGC 3 cut(s) 340, 342, 467
BstMAI GTCTC 1 cut(s) 259
BstMWI GCNNNNNNNGC 4 cut(s) 402, 622, 904, 1208
BstNI CCWGG 2 cut(s) 673, 1394
BstSCI CCNGG 4 cut(s) 467, 468, 671, 1392
BstSLI GKGCMC 1 cut(s) 267
BstUI CGCG 3 cut(s) 338, 340, 465
BstV1I GCAGC 3 cut(s) 18, 654, 1391
BstV2I GAAGAC 3 cut(s) 226, 323, 600
BstX2I RGATCY 4 cut(s) 18, 484, 1159, 1270
BstYI RGATCY 4 cut(s) 18, 484, 1159, 1270
Bsu15I ATCGAT 1 cut(s) 1032
BsuI GTATCC 2 cut(s) 866, 909
BsuRI GGCC 3 cut(s) 164, 265, 1070
BsuTUI ATCGAT 1 cut(s) 1032
BtgI CCRYGG 1 cut(s) 1355
BtsCI GGATG 5 cut(s) 76, 888, 1109, 1159, 1441
BtsI GCAGTG 2 cut(s) 52, 1085
BtsIMutI CAGTG 3 cut(s) 52, 768, 1085
Cac8I GCNNGC 4 cut(s) 340, 344, 946, 1097
CaiI CAGNNNCTG 1 cut(s) 767
CfoI GCGC 3 cut(s) 340, 342, 467
Cfr13I GGNCC 6 cut(s) 162, 263, 264, 787, 1046, 1396
Cfr9I CCCGGG 1 cut(s) 468
ClaI ATCGAT 1 cut(s) 1032
Csp6I GTAC 1 cut(s) 1041
CspCI CAANNNNNGTGG 2 cut(s) 1234, 1269
CviAII CATG 6 cut(s) 34, 391, 489, 641, 1308, 1356
CviQI GTAC 1 cut(s) 1041
DdeI CTNAG 1 cut(s) 10
DraI TTTAAA 2 cut(s) 324, 958
DrdI GACNNNNNNGTC 1 cut(s) 1247
DseDI GACNNNNNNGTC 1 cut(s) 1247
Eam1104I CTCTTC 1 cut(s) 1170
EarI CTCTTC 1 cut(s) 1170
Eco130I CCWWGG 1 cut(s) 1355
Eco24I GRGCYC 1 cut(s) 267
Eco47I GGWCC 3 cut(s) 787, 1046, 1396
Eco88I CYCGRG 4 cut(s) 206, 468, 683, 797
EcoO109I RGGNCCY 3 cut(s) 264, 787, 1046
EcoRII CCWGG 2 cut(s) 671, 1392
EcoT14I CCWWGG 1 cut(s) 1355
EcoT38I GRGCYC 1 cut(s) 267
ErhI CCWWGG 1 cut(s) 1355
FaeI CATG 6 cut(s) 37, 394, 492, 644, 1311, 1359
FaqI GGGAC 1 cut(s) 800
FatI CATG 6 cut(s) 33, 390, 488, 640, 1307, 1355
FauI CCCGC 1 cut(s) 903
FbaI TGATCA 1 cut(s) 438
FblI GTMKAC 2 cut(s) 1263, 1361
Fnu4HI GCNGC 4 cut(s) 7, 668, 908, 1380
FokI GGATG 5 cut(s) 83, 875, 1096, 1166, 1428
FriOI GRGCYC 1 cut(s) 267
Fsp4HI GCNGC 4 cut(s) 7, 668, 908, 1380
FspBI CTAG 4 cut(s) 92, 398, 921, 1184
GlaI GCGC 3 cut(s) 339, 341, 466
GluI GCNGC 4 cut(s) 7, 668, 908, 1380
HaeIII GGCC 3 cut(s) 164, 265, 1070
HapII CCGG 1 cut(s) 469
HhaI GCGC 3 cut(s) 340, 342, 467
Hin1II CATG 6 cut(s) 37, 394, 492, 644, 1311, 1359
Hin6I GCGC 3 cut(s) 338, 340, 465
HinP1I GCGC 3 cut(s) 338, 340, 465
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 2 cut(s) 814, 863
HpaII CCGG 1 cut(s) 469
HphI GGTGA 4 cut(s) 74, 162, 1003, 1393
Hpy166II GTNNAC 3 cut(s) 966, 1264, 1362
Hpy188I TCNGA 5 cut(s) 18, 484, 564, 834, 940
Hpy188III TCNNGA 8 cut(s) 92, 206, 349, 500, 547, 728, 797, 1057
Hpy8I GTNNAC 3 cut(s) 966, 1264, 1362
HpyAV CCTTC 6 cut(s) 151, 367, 559, 813, 1081, 1414
HpyCH4III ACNGT 3 cut(s) 121, 1091, 1249
HpyCH4IV ACGT 6 cut(s) 97, 106, 249, 612, 992, 1336
HpyCH4V TGCA 8 cut(s) 192, 492, 978, 1095, 1278, 1311, 1379, 1411
HpyF10VI GCNNNNNNNGC 4 cut(s) 402, 622, 904, 1208
HpyF3I CTNAG 1 cut(s) 10
HpySE526I ACGT 6 cut(s) 97, 106, 249, 612, 992, 1336
Hsp92II CATG 6 cut(s) 37, 394, 492, 644, 1311, 1359
HspAI GCGC 3 cut(s) 338, 340, 465
KflI GGGWCCC 1 cut(s) 787
Ksp22I TGATCA 1 cut(s) 438
LmnI GCTCC 2 cut(s) 351, 1309
Lsp1109I GCAGC 3 cut(s) 18, 654, 1391
LweI GCATC 3 cut(s) 201, 578, 1198
MaeI CTAG 4 cut(s) 92, 398, 921, 1184
MaeII ACGT 6 cut(s) 97, 106, 249, 612, 992, 1336
MaeIII GTNAC 1 cut(s) 651
MflI RGATCY 4 cut(s) 18, 484, 1159, 1270
MhlI GDGCHC 2 cut(s) 267, 684
MluCI AATT 7 cut(s) 287, 554, 702, 734, 777, 868, 1328
MroXI GAANNNNTTC 2 cut(s) 558, 1220
MseI TTAA 2 cut(s) 323, 957
MslI CAYNNNNRTG 3 cut(s) 276, 521, 1446
MspA1I CMGCKG 1 cut(s) 667
MspI CCGG 1 cut(s) 469
MspR9I CCNGG 4 cut(s) 469, 470, 673, 1394
MvaI CCWGG 2 cut(s) 673, 1394
MvnI CGCG 3 cut(s) 338, 340, 465
MwoI GCNNNNNNNGC 4 cut(s) 402, 622, 904, 1208
NciI CCSGG 2 cut(s) 469, 470
NcoI CCATGG 1 cut(s) 1355
NlaIII CATG 6 cut(s) 37, 394, 492, 644, 1311, 1359
NlaIV GGNNCC 5 cut(s) 163, 265, 788, 789, 1061
NspV TTCGAA 1 cut(s) 1214
PaeR7I CTCGAG 1 cut(s) 683
PauI GCGCGC 1 cut(s) 338
PcsI WCGNNNNNNNCGW 2 cut(s) 103, 246
PdmI GAANNNNTTC 2 cut(s) 558, 1220
PfeI GAWTC 2 cut(s) 814, 863
PflFI GACNNNGTC 1 cut(s) 251
PkrI GCNGC 4 cut(s) 8, 669, 909, 1381
PpuMI RGGWCCY 2 cut(s) 787, 1046
Psp1406I AACGTT 1 cut(s) 992
Psp5II RGGWCCY 2 cut(s) 787, 1046
Psp6I CCWGG 2 cut(s) 671, 1392
PspGI CCWGG 2 cut(s) 671, 1392
PspN4I GGNNCC 5 cut(s) 163, 265, 788, 789, 1061
PspOMI GGGCCC 1 cut(s) 263
PspPI GGNCC 6 cut(s) 162, 263, 264, 787, 1046, 1396
PspPPI RGGWCCY 2 cut(s) 787, 1046
PspXI VCTCGAGB 1 cut(s) 683
PsrI GAACNNNNNNTAC 2 cut(s) 130, 162
PstNI CAGNNNCTG 1 cut(s) 767
PsuI RGATCY 4 cut(s) 18, 484, 1159, 1270
PsyI GACNNNGTC 1 cut(s) 251
PteI GCGCGC 1 cut(s) 338
PvuII CAGCTG 1 cut(s) 667
RsaI GTAC 1 cut(s) 1042
RsaNI GTAC 1 cut(s) 1041
RseI CAYNNNNRTG 3 cut(s) 276, 521, 1446
SaqAI TTAA 2 cut(s) 323, 957
SatI GCNGC 4 cut(s) 7, 668, 908, 1380
Sau96I GGNCC 6 cut(s) 162, 263, 264, 787, 1046, 1396
ScrFI CCNGG 4 cut(s) 469, 470, 673, 1394
SduI GDGCHC 2 cut(s) 267, 684
SfaNI GCATC 3 cut(s) 201, 578, 1198
Sfr274I CTCGAG 1 cut(s) 683
SfuI TTCGAA 1 cut(s) 1214
SinI GGWCC 3 cut(s) 787, 1046, 1396
SlaI CTCGAG 1 cut(s) 683
SmaI CCCGGG 1 cut(s) 470
SmiMI CAYNNNNRTG 3 cut(s) 276, 521, 1446
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
Sse9I AATT 7 cut(s) 287, 554, 702, 734, 777, 868, 1328
SsiI CCGC 3 cut(s) 896, 908, 1118
SspMI CTAG 4 cut(s) 92, 398, 921, 1184
StyD4I CCNGG 4 cut(s) 467, 468, 671, 1392
StyI CCWWGG 1 cut(s) 1355
TaaI ACNGT 3 cut(s) 121, 1091, 1249
TaiI ACGT 6 cut(s) 100, 109, 252, 615, 995, 1339
TaqI TCGA 9 cut(s) 274, 534, 627, 657, 684, 729, 1032, 1074, 1214
TasI AATT 7 cut(s) 287, 554, 702, 734, 777, 868, 1328
TatI WGTACW 1 cut(s) 1040
TauI GCSGC 1 cut(s) 910
TfiI GAWTC 2 cut(s) 814, 863
Tru1I TTAA 2 cut(s) 323, 957
Tru9I TTAA 2 cut(s) 323, 957
TscAI CASTG 3 cut(s) 52, 768, 1085
TseI GCWGC 3 cut(s) 6, 667, 1379
TspDTI ATGAA 5 cut(s) 77, 87, 260, 505, 606
TspMI CCCGGG 1 cut(s) 468
TspRI CASTG 3 cut(s) 52, 768, 1085
Tth111I GACNNNGTC 1 cut(s) 251
VpaK11BI GGWCC 3 cut(s) 787, 1046, 1396
XapI RAATTY 2 cut(s) 777, 868
XbaI TCTAGA 1 cut(s) 91
XcmI CCANNNNNNNNNTGG 2 cut(s) 1021, 1314
XhoI CTCGAG 1 cut(s) 683
XmaI CCCGGG 1 cut(s) 468
XmiI GTMKAC 2 cut(s) 1263, 1361
XmnI GAANNNNTTC 2 cut(s) 558, 1220
XspI CTAG 4 cut(s) 92, 398, 921, 1184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.