RchiOBHm_Chr2g0175051

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000188
Physical Location & Seq
Forward (+)
87439739 .. 87441178
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54215

Sequence Viewer

Length: 1440 bp
ATGGGAGGTACCAGTGATATAGAAAAGGGTGAAGTGGATGAAAGCGTTCCAGTTCATCTAGAACGTAAAGGTCATTCTCAAAAGAAAAAAAAACAACGTAAAGGTATGACTGTTGAAGAAAGGAAAAGAACCTTCAATTTAGAGATTTCGGTGGCCGAATCACCTTTGCCTTTTTCATGTTGCATCTTCAGAGTTCCTGAGGTGCTACGAAGACAAAAAAAGGAGGCATACACACCTGACATAGTCTCAATCGGGCCCTTTCATCGAGGTGCTAAAAAATTAAAACTCCTGGAAAATGTGAAAAAATGGTATTTAAAATGTCTTTTCTTACCACAGCGTCAGGGACAGCGCTCGACAGCATTGAGCCTGGATAGCTTGACTGAAAGGATCAAGGTAGAGGAACTGGATAAACGAGCCCGGGGTTGTTATTCAGACCCATGCCATCATCTTGACCAAGACGACTTCATAGAGATGCTTATTCTCGATGGTTGTTTCTTGATAGAATTATTTCGTAAGGCACCTTCTCAACATGAAGACATTCGACAAGATAATGACGACCCTATTTTCAACATGTCTTGTATGCTCGAATATCTGTACCATGATCTTCTGTTGCTAGAAAATCAGCTACCTTGGTTTGTGCTCCAGTATTTCTATAATCTAATTGACAGCGGTAGCTCTAAACTCCTCAGAGAAGTGGTAATCGACTTCTTCAAAGATTCAGTGTCTGATTTCAAAATTTTCAGCACCCGCGATCCTAAGATTGAGATTCTTCACATACTTGATCTGATTAGAACTTCGCTCGTTCATGAACATGAAGTTAAGAATGAAAATGTTCAGCAAAAACAAGACTCAGGGGTCCCTATAACAAATATAAAAAAAGACCTAGTCCACTTGCCACAGAGGATACCTAGTGCTGCTTCTCTTTCAGAGGCGGGAGTTGAATTTAAAAATGGCACCTCAGGTTGCATATTGAACATAAAGTTCGAAAAAGGCGTTTTCACCATTCCTCCTCTGGCTATCGATGAGAGGACGGGTCCTTTGTTCAGGAACCTTATGGCCTACGAACAGTGTTATATCAGTTGCAAACACAAGATAACATCCTACGCGGTTTTGATGGATAACCTCATCGATACGAACGAGGATGTGAATCTTCTATGTGAGAAACATATAGTAGCCAACTGGTTGAGTGCCGATGATGCTGCGAAGTTCTTCAACGATCTATACAATGACACCACAGTGATTGACTTTGTCTACAAGGAACTCTGCGAAAACGTGCATAAATATCACGAAGCTACATGGAACAGGTGGAGAGAGAAACTGAAACGTGATTATTTTGATACACCATGGGCTACTATCTCTTTTTTCGCAGCTTTTGTCCTCCTGGTCCTCACCTTCTTGCAGACCATTTACACAATACAGCCATACTATCATCCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

479

Amino Acids

55.82

Weight (kDa)

6.27

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 62 - 463 6.4e-117 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02500 FvH4_4g03110 FvH4_5g11900 FvH4_5g11910 FvH4_5g19510 FvH4_6g53141 FvH4_6g53141 FvH4_6g53143 FvH4_6g53143 FvH4_6g53260 FvH4_6g53260 FvH4_6g53260 FvH4_6g53280
malus_domestica MD00G1110800.v1.1 MD00G1111300.v1.1 MD08G1225300.v1.1 MD08G1225500.v1.1 MD08G1225700.v1.1 MD09G1013500.v1.1 MD09G1013700.v1.1 MD09G1013800.v1.1 MD09G1014000.v1.1
prunus_persica Prupe.1G028300_v2.0.a1 Prupe.1G029300_v2.0.a1 Prupe.1G029400_v2.0.a1 Prupe.1G029800_v2.0.a1 Prupe.1G165900_v2.0.a1 Prupe.3G303500_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029100_v2.0.a1 Prupe.5G029200_v2.0.a1 Prupe.7G037400_v2.0.a1
pyrus_communis pycom08g19660 pycom08g19690 pycom08g19710 pycom08g19720 pycom111g01160 pycom111g01170 pycom17g01140
rosa_chinensis RchiOBHm_Chr2g0111831 RchiOBHm_Chr2g0138211 RchiOBHm_Chr2g0163091 RchiOBHm_Chr2g0175051 RchiOBHm_Chr2g0175141 RchiOBHm_Chr2g0175171 RchiOBHm_Chr2g0175191 RchiOBHm_Chr3g0483151 RchiOBHm_Chr3g0483161 RchiOBHm_Chr3g0483171 RchiOBHm_Chr4g0389941 RchiOBHm_Chr4g0411021 RchiOBHm_Chr4g0411031 RchiOBHm_Chr4g0411041 RchiOBHm_Chr5g0041861 RchiOBHm_Chr5g0058261 RchiOBHm_Chr5g0065661 RchiOBHm_Chr5g0070431 RchiOBHm_Chr7g0185221 RchiOBHm_Chr7g0185581 RchiOBHm_Chr7g0185591 RchiOBHm_Chr7g0185611 RchiOBHm_Chr7g0185641
rosa_laevigata RLG00000004895 RLG00000004896 RLG00000004897 RLG00000008379 RLG00000021370 RLG00000022309 RLG00000034099 RLG00000035811 RLG00000036132 RLG00000036450
rosa_multiflora Rmu_co8229993.1_g000001 Rmu_co8360165.1_g000001 Rmu_co8461695.1_g000001 Rmu_sc0000213.1_g000004 Rmu_sc0000235.1_g000066 Rmu_sc0000367.1_g000060 Rmu_sc0000861.1_g000057 Rmu_sc0000861.1_g000068 Rmu_sc0001244.1_g000011 Rmu_sc0001244.1_g000013 Rmu_sc0001323.1_g000018 Rmu_sc0002180.1_g000032 Rmu_sc0002280.1_g000009 Rmu_sc0003226.1_g000095 Rmu_sc0003226.1_g000096 Rmu_sc0003555.1_g000010 Rmu_sc0003555.1_g000018 Rmu_sc0003920.1_g000011 Rmu_sc0003984.1_g000012 Rmu_sc0004336.1_g000026 Rmu_sc0006027.1_g000005 Rmu_sc0006570.1_g000004 Rmu_sc0007961.1_g000010 Rmu_sc0008747.1_g000001 Rmu_sc0008834.1_g000005 Rmu_sc0010190.1_g000004 Rmu_sc0010190.1_g000007 Rmu_sc0010190.1_g000008 Rmu_sc0010642.1_g000012 Rmu_sc0011497.1_g000002
rosa_roxburghii Rroxscaffold_1G00010770 Rroxscaffold_1G00010780 Rroxscaffold_1G00011860 Rroxscaffold_1G00015470 Rroxscaffold_1G00038670 Rroxscaffold_2G00077520 Rroxscaffold_2G00077550 Rroxscaffold_2G00106420 Rroxscaffold_3G00268750 Rroxscaffold_3G00268770 Rroxscaffold_3G00268780 Rroxscaffold_3G00268790 Rroxscaffold_3G00269130 Rroxscaffold_5G00336020 Rroxscaffold_5G00343150 Rroxscaffold_5G00355700
rosa_rugosa Rorug02G0500300 Rorug02G0581200 Rorug03G0204700 Rorug03G0327300 Rorug05G0196100 Rorug05G0196400 Rorug05G0405900 Rorug05G0406000 Rorug06G0467000 Rorug06G0467000 Rorug06G0470200 Rorug06G0470200 Rorug07G0180500
rosa_samantha Rh2AG566700 Rh2AG661900 Rh2AG663200 Rh3CG286400 Rh3CG286500 Rh3CG366100 Rh4DG024200 Rh4DG076600 Rh4DG160000 Rh4DG160100 Rh5BG286800 Rh5DG295500 Rh5DG461000 Rh7DG072100 Rh7DG075500
rosa_wichuraiana Rw1G002310 Rw1G015820 Rw2G046920 Rw2G054280 Rw3G022880 Rw3G029170 Rw4G002330 Rw4G013670 Rw5G026420 Rw5G026440 Rw5G040490 Rw5G042130 Rw7G006300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 854
Acc65I GGTACC 1 cut(s) 8
AccB1I GGYRCC 3 cut(s) 8, 517, 953
AccI GTMKAC 1 cut(s) 1251
AccII CGCG 2 cut(s) 750, 1106
AciI CCGC 4 cut(s) 669, 748, 932, 1106
AclWI GGATC 2 cut(s) 395, 746
AcoI YGGCCR 1 cut(s) 153
AcsI RAATTY 2 cut(s) 735, 941
AcuI CTGAAG 1 cut(s) 172
AfaI GTAC 2 cut(s) 10, 596
AfeI AGCGCT 1 cut(s) 350
AflIII ACRYGT 1 cut(s) 570
AgsI TTSAA 8 cut(s) 116, 136, 568, 712, 733, 941, 973, 1213
AjnI CCWGG 3 cut(s) 288, 366, 1380
AleI CACNNNNGTG 1 cut(s) 1235
AluBI AGCT 5 cut(s) 375, 625, 675, 1292, 1370
AluI AGCT 5 cut(s) 375, 625, 675, 1292, 1370
Alw21I GWGCWC 1 cut(s) 642
Alw26I GTCTC 1 cut(s) 250
AlwI GGATC 2 cut(s) 395, 746
AlwNI CAGNNNCTG 1 cut(s) 725
Ama87I CYCGRG 1 cut(s) 417
Aor51HI AGCGCT 1 cut(s) 350
AoxI GGCC 3 cut(s) 153, 254, 1056
ApaI GGGCCC 1 cut(s) 258
ApeKI GCWGC 3 cut(s) 914, 1199, 1367
ApoI RAATTY 2 cut(s) 735, 941
ArsI GACNNNNNNTTYG 2 cut(s) 1021, 1053
Asp700I GAANNNNTTC 5 cut(s) 45, 507, 537, 831, 1208
Asp718I GGTACC 1 cut(s) 8
AspLEI GCGC 1 cut(s) 351
AspS9I GGNCC 5 cut(s) 254, 255, 856, 1034, 1384
AsuC2I CCSGG 2 cut(s) 418, 419
AsuHPI GGTGA 4 cut(s) 41, 153, 991, 1381
AsuII TTCGAA 1 cut(s) 984
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 3 cut(s) 856, 1034, 1384
AxyI CCTNAGG 2 cut(s) 198, 958
BaeGI GKGCMC 1 cut(s) 258
BanI GGYRCC 3 cut(s) 8, 517, 953
BanII GRGCYC 2 cut(s) 258, 418
BarI GAAGNNNNNNTAC 2 cut(s) 505, 537
BbsI GAAGAC 2 cut(s) 217, 540
Bbv12I GWGCWC 1 cut(s) 642
BbvI GCAGC 3 cut(s) 901, 1186, 1379
BccI CCATC 3 cut(s) 450, 479, 1108
BcgI CGANNNNNNTGC 2 cut(s) 1181, 1215
BciT130I CCWGG 3 cut(s) 290, 368, 1382
BciVI GTATCC 1 cut(s) 897
BcnI CCSGG 2 cut(s) 418, 419
BcoDI GTCTC 1 cut(s) 250
BfaI CTAG 4 cut(s) 59, 614, 884, 909
BfoI RGCGCY 1 cut(s) 352
BfuI GTATCC 1 cut(s) 897
BisI GCNGC 3 cut(s) 915, 1200, 1368
BlsI GCNGC 3 cut(s) 916, 1201, 1369
Bme1390I CCNGG 5 cut(s) 290, 368, 418, 419, 1382
Bme18I GGWCC 3 cut(s) 856, 1034, 1384
BmeT110I CYCGRG 1 cut(s) 417
BmgT120I GGNCC 5 cut(s) 254, 255, 856, 1034, 1384
BmiI GGNNCC 8 cut(s) 10, 256, 519, 857, 858, 955, 1035, 1049
BmrFI CCNGG 5 cut(s) 290, 368, 418, 419, 1382
BmsI GCATC 3 cut(s) 192, 462, 1186
BpiI GAAGAC 2 cut(s) 217, 540
BpmI CTGGAG 1 cut(s) 626
Bpu14I TTCGAA 1 cut(s) 984
BpuMI CCSGG 2 cut(s) 418, 419
Bsa29I ATCGAT 2 cut(s) 1020, 1128
BsaBI GATNNNNATC 1 cut(s) 1146
BsaJI CCNNGG 4 cut(s) 417, 418, 629, 1343
BsaXI ACNNNNNCTCC 2 cut(s) 991, 1021
Bse1I ACTGG 5 cut(s) 12, 50, 408, 643, 1184
Bse21I CCTNAGG 2 cut(s) 198, 958
Bse8I GATNNNNATC 1 cut(s) 1146
BseBI CCWGG 3 cut(s) 290, 368, 1382
BseCI ATCGAT 2 cut(s) 1020, 1128
BseDI CCNNGG 4 cut(s) 417, 418, 629, 1343
BseGI GGATG 4 cut(s) 43, 1097, 1147, 1429
BseJI GATNNNNATC 1 cut(s) 1146
BseMII CTCAG 4 cut(s) 189, 700, 864, 972
BseNI ACTGG 5 cut(s) 12, 50, 408, 643, 1184
BseRI GAGGAG 2 cut(s) 674, 999
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 3 cut(s) 901, 1186, 1379
Bsh1236I CGCG 2 cut(s) 750, 1106
BshFI GGCC 3 cut(s) 155, 256, 1058
BshNI GGYRCC 3 cut(s) 8, 517, 953
BshVI ATCGAT 2 cut(s) 1020, 1128
BsiHKAI GWGCWC 1 cut(s) 642
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 1 cut(s) 418
BslFI GGGAC 2 cut(s) 357, 842
BsmAI GTCTC 1 cut(s) 250
BsmFI GGGAC 2 cut(s) 357, 842
BsnI GGCC 3 cut(s) 155, 256, 1058
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 1 cut(s) 984
Bsp120I GGGCCC 1 cut(s) 254
Bsp1286I GDGCHC 3 cut(s) 258, 418, 642
Bsp143I GATC 5 cut(s) 387, 601, 751, 781, 1216
Bsp19I CCATGG 1 cut(s) 1343
BspACI CCGC 4 cut(s) 669, 748, 932, 1106
BspANI GGCC 3 cut(s) 155, 256, 1058
BspCNI CTCAG 4 cut(s) 190, 699, 863, 971
BspDI ATCGAT 2 cut(s) 1020, 1128
BspFNI CGCG 2 cut(s) 750, 1106
BspHI TCATGA 1 cut(s) 805
BspLI GGNNCC 8 cut(s) 10, 256, 519, 857, 858, 955, 1035, 1049
BspPI GGATC 2 cut(s) 395, 746
BspT104I TTCGAA 1 cut(s) 984
BspT107I GGYRCC 3 cut(s) 8, 517, 953
BsrI ACTGG 5 cut(s) 12, 50, 408, 643, 1184
BssECI CCNNGG 4 cut(s) 417, 418, 629, 1343
BssMI GATC 5 cut(s) 387, 601, 751, 781, 1216
BssT1I CCWWGG 2 cut(s) 629, 1343
Bst2UI CCWGG 3 cut(s) 290, 368, 1382
Bst4CI ACNGT 3 cut(s) 112, 1068, 1237
BstBI TTCGAA 1 cut(s) 984
BstDEI CTNAG 5 cut(s) 198, 686, 756, 850, 958
BstDSI CCRYGG 1 cut(s) 1343
BstF5I GGATG 4 cut(s) 43, 1097, 1147, 1429
BstFNI CGCG 2 cut(s) 750, 1106
BstH2I RGCGCY 1 cut(s) 352
BstHHI GCGC 1 cut(s) 351
BstKTI GATC 5 cut(s) 390, 604, 754, 784, 1219
BstMAI GTCTC 1 cut(s) 250
BstMBI GATC 5 cut(s) 387, 601, 751, 781, 1216
BstMWI GCNNNNNNNGC 2 cut(s) 372, 1196
BstNI CCWGG 3 cut(s) 290, 368, 1382
BstNSI RCATGY 1 cut(s) 574
BstSCI CCNGG 5 cut(s) 288, 366, 416, 417, 1380
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 2 cut(s) 750, 1106
BstV1I GCAGC 3 cut(s) 901, 1186, 1379
BstV2I GAAGAC 2 cut(s) 217, 540
Bsu15I ATCGAT 2 cut(s) 1020, 1128
Bsu36I CCTNAGG 2 cut(s) 198, 958
BsuI GTATCC 1 cut(s) 897
BsuRI GGCC 3 cut(s) 155, 256, 1058
BsuTUI ATCGAT 2 cut(s) 1020, 1128
BtgI CCRYGG 1 cut(s) 1343
BtsCI GGATG 4 cut(s) 43, 1097, 1147, 1429
BtsIMutI CAGTG 4 cut(s) 19, 726, 1073, 1242
CaiI CAGNNNCTG 1 cut(s) 725
CciI TCATGA 1 cut(s) 805
CfoI GCGC 1 cut(s) 351
Cfr13I GGNCC 5 cut(s) 254, 255, 856, 1034, 1384
Cfr9I CCCGGG 1 cut(s) 417
ClaI ATCGAT 2 cut(s) 1020, 1128
CseI GACGC 1 cut(s) 326
Csp6I GTAC 2 cut(s) 9, 595
CspCI CAANNNNNGTGG 2 cut(s) 1222, 1257
CviAII CATG 9 cut(s) 177, 438, 530, 571, 599, 806, 812, 1296, 1344
CviQI GTAC 2 cut(s) 9, 595
DdeI CTNAG 5 cut(s) 198, 686, 756, 850, 958
DpnI GATC 5 cut(s) 389, 603, 753, 783, 1218
DpnII GATC 5 cut(s) 387, 601, 751, 781, 1216
DraI TTTAAA 2 cut(s) 315, 946
DrdI GACNNNNNNGTC 1 cut(s) 854
DseDI GACNNNNNNGTC 1 cut(s) 854
EaeI YGGCCR 1 cut(s) 153
Eco130I CCWWGG 2 cut(s) 629, 1343
Eco24I GRGCYC 2 cut(s) 258, 418
Eco47I GGWCC 3 cut(s) 856, 1034, 1384
Eco47III AGCGCT 1 cut(s) 350
Eco57I CTGAAG 1 cut(s) 172
Eco81I CCTNAGG 2 cut(s) 198, 958
Eco88I CYCGRG 1 cut(s) 417
EcoO109I RGGNCCY 3 cut(s) 255, 856, 1034
EcoRII CCWGG 3 cut(s) 288, 366, 1380
EcoT14I CCWWGG 2 cut(s) 629, 1343
EcoT38I GRGCYC 2 cut(s) 258, 418
ErhI CCWWGG 2 cut(s) 629, 1343
FaeI CATG 9 cut(s) 180, 441, 533, 574, 602, 809, 815, 1299, 1347
FaqI GGGAC 2 cut(s) 357, 842
FatI CATG 9 cut(s) 176, 437, 529, 570, 598, 805, 811, 1295, 1343
FauI CCCGC 2 cut(s) 755, 925
FblI GTMKAC 1 cut(s) 1251
Fnu4HI GCNGC 3 cut(s) 915, 1200, 1368
FokI GGATG 4 cut(s) 50, 1084, 1154, 1416
FriOI GRGCYC 2 cut(s) 258, 418
Fsp4HI GCNGC 3 cut(s) 915, 1200, 1368
FspBI CTAG 4 cut(s) 59, 614, 884, 909
GlaI GCGC 1 cut(s) 350
GluI GCNGC 3 cut(s) 915, 1200, 1368
GsuI CTGGAG 1 cut(s) 626
HaeII RGCGCY 1 cut(s) 352
HaeIII GGCC 3 cut(s) 155, 256, 1058
HapII CCGG 1 cut(s) 418
HgaI GACGC 1 cut(s) 326
HhaI GCGC 1 cut(s) 351
Hin1II CATG 9 cut(s) 180, 441, 533, 574, 602, 809, 815, 1299, 1347
Hin6I GCGC 1 cut(s) 349
HinP1I GCGC 1 cut(s) 349
HinfI GANTC 5 cut(s) 158, 716, 766, 848, 1147
HpaII CCGG 1 cut(s) 418
HphI GGTGA 4 cut(s) 41, 153, 991, 1381
Hpy166II GTNNAC 2 cut(s) 889, 1252
Hpy188I TCNGA 6 cut(s) 191, 433, 689, 727, 786, 928
Hpy188III TCNNGA 8 cut(s) 59, 197, 449, 482, 496, 806, 1045, 1286
Hpy8I GTNNAC 2 cut(s) 889, 1252
HpyAV CCTTC 3 cut(s) 142, 531, 1402
HpyCH4III ACNGT 3 cut(s) 112, 1068, 1237
HpyCH4IV ACGT 4 cut(s) 64, 97, 1272, 1324
HpyCH4V TGCA 5 cut(s) 183, 966, 1083, 1276, 1399
HpyF10VI GCNNNNNNNGC 2 cut(s) 372, 1196
HpyF3I CTNAG 5 cut(s) 198, 686, 756, 850, 958
HpySE526I ACGT 4 cut(s) 64, 97, 1272, 1324
Hsp92II CATG 9 cut(s) 180, 441, 533, 574, 602, 809, 815, 1299, 1347
HspAI GCGC 1 cut(s) 349
KflI GGGWCCC 1 cut(s) 856
KpnI GGTACC 1 cut(s) 12
Kzo9I GATC 5 cut(s) 387, 601, 751, 781, 1216
LmnI GCTCC 1 cut(s) 645
Lsp1109I GCAGC 3 cut(s) 901, 1186, 1379
LweI GCATC 3 cut(s) 192, 462, 1186
MaeI CTAG 4 cut(s) 59, 614, 884, 909
MaeII ACGT 4 cut(s) 64, 97, 1272, 1324
MalI GATC 5 cut(s) 389, 603, 753, 783, 1218
MboI GATC 5 cut(s) 387, 601, 751, 781, 1216
MboII GAAGA 9 cut(s) 128, 178, 222, 545, 596, 700, 761, 1142, 1201
MhlI GDGCHC 3 cut(s) 258, 418, 642
MluCI AATT 6 cut(s) 136, 278, 503, 660, 735, 941
MlyI GAGTC 1 cut(s) 842
MroXI GAANNNNTTC 5 cut(s) 45, 507, 537, 831, 1208
MseI TTAA 5 cut(s) 281, 314, 819, 945, 1438
MslI CAYNNNNRTG 4 cut(s) 267, 470, 810, 1235
MspA1I CMGCKG 1 cut(s) 669
MspI CCGG 1 cut(s) 418
MspR9I CCNGG 5 cut(s) 290, 368, 418, 419, 1382
MvaI CCWGG 3 cut(s) 290, 368, 1382
MvnI CGCG 2 cut(s) 750, 1106
MwoI GCNNNNNNNGC 2 cut(s) 372, 1196
NciI CCSGG 2 cut(s) 418, 419
NcoI CCATGG 1 cut(s) 1343
NdeII GATC 5 cut(s) 387, 601, 751, 781, 1216
NlaIII CATG 9 cut(s) 180, 441, 533, 574, 602, 809, 815, 1299, 1347
NlaIV GGNNCC 8 cut(s) 10, 256, 519, 857, 858, 955, 1035, 1049
NspI RCATGY 1 cut(s) 574
NspV TTCGAA 1 cut(s) 984
OliI CACNNNNGTG 1 cut(s) 1235
PagI TCATGA 1 cut(s) 805
PciI ACATGT 1 cut(s) 570
PcsI WCGNNNNNNNCGW 2 cut(s) 990, 1134
PdmI GAANNNNTTC 5 cut(s) 45, 507, 537, 831, 1208
PfeI GAWTC 4 cut(s) 158, 716, 766, 1147
PflFI GACNNNGTC 3 cut(s) 242, 884, 1247
PfoI TCCNGGA 1 cut(s) 288
PkrI GCNGC 3 cut(s) 916, 1201, 1369
PleI GAGTC 1 cut(s) 842
PpsI GAGTC 1 cut(s) 842
PpuMI RGGWCCY 2 cut(s) 856, 1034
PscI ACATGT 1 cut(s) 570
Psp5II RGGWCCY 2 cut(s) 856, 1034
Psp6I CCWGG 3 cut(s) 288, 366, 1380
PspGI CCWGG 3 cut(s) 288, 366, 1380
PspN4I GGNNCC 8 cut(s) 10, 256, 519, 857, 858, 955, 1035, 1049
PspOMI GGGCCC 1 cut(s) 254
PspPI GGNCC 5 cut(s) 254, 255, 856, 1034, 1384
PspPPI RGGWCCY 2 cut(s) 856, 1034
PstNI CAGNNNCTG 1 cut(s) 725
PsyI GACNNNGTC 3 cut(s) 242, 884, 1247
RsaI GTAC 2 cut(s) 10, 596
RsaNI GTAC 2 cut(s) 9, 595
RseI CAYNNNNRTG 4 cut(s) 267, 470, 810, 1235
SaqAI TTAA 5 cut(s) 281, 314, 819, 945, 1438
SatI GCNGC 3 cut(s) 915, 1200, 1368
Sau3AI GATC 5 cut(s) 387, 601, 751, 781, 1216
Sau96I GGNCC 5 cut(s) 254, 255, 856, 1034, 1384
SchI GAGTC 1 cut(s) 842
ScrFI CCNGG 5 cut(s) 290, 368, 418, 419, 1382
SduI GDGCHC 3 cut(s) 258, 418, 642
SfaNI GCATC 3 cut(s) 192, 462, 1186
SfuI TTCGAA 1 cut(s) 984
SinI GGWCC 3 cut(s) 856, 1034, 1384
SmaI CCCGGG 1 cut(s) 419
SmiMI CAYNNNNRTG 4 cut(s) 267, 470, 810, 1235
Sse9I AATT 6 cut(s) 136, 278, 503, 660, 735, 941
SsiI CCGC 4 cut(s) 669, 748, 932, 1106
SspMI CTAG 4 cut(s) 59, 614, 884, 909
StyD4I CCNGG 5 cut(s) 288, 366, 416, 417, 1380
StyI CCWWGG 2 cut(s) 629, 1343
TaaI ACNGT 3 cut(s) 112, 1068, 1237
TaiI ACGT 4 cut(s) 67, 100, 1275, 1327
TaqI TCGA 9 cut(s) 265, 353, 483, 541, 585, 702, 984, 1020, 1128
TasI AATT 6 cut(s) 136, 278, 503, 660, 735, 941
TfiI GAWTC 4 cut(s) 158, 716, 766, 1147
Tru1I TTAA 5 cut(s) 281, 314, 819, 945, 1438
Tru9I TTAA 5 cut(s) 281, 314, 819, 945, 1438
TscAI CASTG 4 cut(s) 19, 726, 1073, 1242
TseI GCWGC 3 cut(s) 914, 1199, 1367
TspMI CCCGGG 1 cut(s) 417
TspRI CASTG 4 cut(s) 19, 726, 1073, 1242
Tth111I GACNNNGTC 3 cut(s) 242, 884, 1247
VpaK11BI GGWCC 3 cut(s) 856, 1034, 1384
XapI RAATTY 2 cut(s) 735, 941
XbaI TCTAGA 1 cut(s) 58
XceI RCATGY 1 cut(s) 574
XcmI CCANNNNNNNNNTGG 1 cut(s) 1009
XmaI CCCGGG 1 cut(s) 417
XmiI GTMKAC 1 cut(s) 1251
XmnI GAANNNNTTC 5 cut(s) 45, 507, 537, 831, 1208
XspI CTAG 4 cut(s) 59, 614, 884, 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.